AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1050050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1050050 MtrunA17_Chr3g0118771 84.051 395 26 1 2 359 100 494 0.0 686
Msa1050050 MtrunA17_Chr3g0118691 74.177 395 65 1 2 359 94 488 0.0 609
Msa1050050 MtrunA17_Chr3g0118711 72.843 394 70 1 2 358 92 485 0.0 603
Msa1050050 MtrunA17_Chr3g0118671 71.899 395 74 1 2 359 85 479 0.0 598
Msa1050050 MtrunA17_Chr3g0118701 70.886 395 78 1 2 359 94 488 0.0 592
Msa1050050 MtrunA17_Chr3g0118751 75.443 395 31 3 2 359 85 450 0.0 589
Msa1050050 MtrunA17_Chr3g0118721 83.390 295 49 0 65 359 1 295 0.0 528
Msa1050050 MtrunA17_Chr3g0118661 56.962 395 132 2 2 359 92 485 2.99e-151 435
Msa1050050 MtrunA17_Chr5g0426431 48.593 391 159 5 2 354 92 478 8.62e-129 377
Msa1050050 MtrunA17_Chr3g0092641 47.826 391 162 5 2 354 92 478 8.30e-127 372
Msa1050050 MtrunA17_Chr6g0454201 48.346 393 160 5 2 354 92 481 1.06e-125 370
Msa1050050 MtrunA17_Chr6g0454331 47.837 393 162 4 2 354 90 479 8.53e-125 367
Msa1050050 MtrunA17_Chr3g0078841 46.410 390 170 3 2 354 91 478 7.05e-124 365
Msa1050050 MtrunA17_Chr6g0454401 46.954 394 164 5 2 354 92 481 1.77e-121 359
Msa1050050 MtrunA17_Chr6g0454191 45.802 393 170 5 2 354 92 481 7.65e-121 357
Msa1050050 MtrunA17_Chr8g0336331 46.819 393 164 4 2 354 90 477 5.73e-120 355
Msa1050050 MtrunA17_Chr6g0454341 45.128 390 175 3 2 354 91 478 9.96e-120 354
Msa1050050 MtrunA17_Chr6g0454211 47.462 394 162 5 2 354 378 767 2.88e-119 362
Msa1050050 MtrunA17_Chr6g0454211 35.714 308 113 4 46 353 45 267 1.63e-53 188
Msa1050050 MtrunA17_Chr6g0454291 46.310 393 168 4 2 354 88 477 3.84e-119 353
Msa1050050 MtrunA17_Chr5g0423981 48.883 358 175 5 2 354 91 445 2.18e-118 350
Msa1050050 MtrunA17_Chr6g0453951 45.038 393 173 4 2 354 138 527 5.63e-118 352
Msa1050050 MtrunA17_Chr6g0454321 44.757 391 174 4 2 355 91 476 1.20e-116 352
Msa1050050 MtrunA17_Chr2g0278711 45.663 392 169 5 2 354 91 477 1.51e-116 346
Msa1050050 MtrunA17_Chr6g0453961 44.924 394 173 6 2 354 100 490 2.99e-116 346
Msa1050050 MtrunA17_Chr6g0454181 43.990 391 176 4 4 354 93 480 3.08e-116 345
Msa1050050 MtrunA17_Chr6g0454121 44.416 394 176 4 1 354 89 479 3.09e-116 345
Msa1050050 MtrunA17_Chr6g0454301 45.897 390 172 3 2 354 344 731 9.88e-116 352
Msa1050050 MtrunA17_Chr6g0454301 55.459 229 99 2 124 352 3 228 2.58e-87 278
Msa1050050 MtrunA17_Chr5g0426401 51.923 312 143 5 46 354 4 311 1.99e-115 337
Msa1050050 MtrunA17_Chr6g0454361 44.670 394 173 5 2 354 92 481 2.05e-115 343
Msa1050050 MtrunA17_Chr7g0217881 46.011 376 176 6 2 354 91 462 4.16e-114 339
Msa1050050 MtrunA17_Chr6g0452771 44.784 393 174 4 2 354 91 480 1.16e-113 339
Msa1050050 MtrunA17_Chr4g0050341 43.003 393 183 3 2 353 98 490 1.78e-112 336
Msa1050050 MtrunA17_Chr6g0454131 43.455 382 173 4 13 354 101 479 2.30e-111 333
Msa1050050 MtrunA17_Chr8g0359821 44.072 388 174 4 7 354 94 478 2.86e-111 333
Msa1050050 MtrunA17_Chr6g0454151 44.192 396 176 5 2 357 91 481 4.24e-111 332
Msa1050050 MtrunA17_Chr6g0454351 43.766 393 161 5 2 354 93 465 2.61e-110 330
Msa1050050 MtrunA17_Chr6g0454261 46.218 357 177 6 9 354 128 480 7.34e-110 329
Msa1050050 MtrunA17_Chr6g0454271 53.103 290 133 2 65 354 1 287 1.59e-109 322
Msa1050050 MtrunA17_Chr6g0454141 47.249 309 160 2 46 354 175 480 4.22e-105 317
Msa1050050 MtrunA17_Chr6g0454221 54.936 233 103 2 124 356 3 233 2.51e-90 273
Msa1050050 MtrunA17_Chr8g0355011 45.307 309 124 3 46 354 99 362 1.24e-88 271
Msa1050050 MtrunA17_Chr6g0454171 42.812 313 128 5 46 354 45 310 3.02e-87 266
Msa1050050 MtrunA17_Chr6g0454251 42.765 311 135 4 2 272 88 395 1.83e-82 256
Msa1050050 MtrunA17_Chr3g0112771 40.000 295 165 4 62 354 168 452 1.76e-71 230
Msa1050050 MtrunA17_Chr5g0412131 37.624 303 183 5 51 351 169 467 1.63e-66 217
Msa1050050 MtrunA17_Chr6g0454371 55.233 172 76 1 183 354 1 171 1.42e-65 205
Msa1050050 MtrunA17_Chr5g0412111 35.644 303 187 5 51 351 163 459 8.41e-63 207
Msa1050050 MtrunA17_Chr5g0412101 37.294 303 185 4 51 351 169 468 1.53e-62 207
Msa1050050 MtrunA17_Chr3g0112761 33.777 376 210 9 10 354 83 450 9.01e-61 202
Msa1050050 MtrunA17_Chr6g0454231 42.188 256 106 4 100 354 5 219 8.33e-60 200
Msa1050050 MtrunA17_Chr6g0454231 32.653 147 62 1 2 111 331 477 7.04e-16 78.6
Msa1050050 MtrunA17_Chr7g0249981 34.579 321 189 7 50 359 162 472 3.68e-59 198
Msa1050050 MtrunA17_Chr8g0336261 60.584 137 53 1 183 319 1 136 2.15e-58 185
Msa1050050 MtrunA17_Chr5g0414331 31.865 386 225 8 1 357 81 457 1.38e-57 194
Msa1050050 MtrunA17_Chr4g0044511 40.221 271 143 5 98 353 238 504 2.13e-57 194
Msa1050050 MtrunA17_Chr1g0207981 33.333 300 185 6 62 354 182 473 4.53e-56 190
Msa1050050 MtrunA17_Chr5g0414321 36.644 292 173 5 71 357 171 455 6.13e-56 189
Msa1050050 MtrunA17_Chr4g0032331 36.928 306 172 8 58 358 165 454 1.04e-55 188
Msa1050050 MtrunA17_Chr1g0207931 37.247 247 144 3 103 342 244 486 1.40e-55 189
Msa1050050 MtrunA17_Chr7g0250001 30.000 370 222 8 14 355 89 449 1.91e-55 188
Msa1050050 MtrunA17_Chr6g0464921 35.570 298 178 5 62 353 166 455 1.25e-54 186
Msa1050050 MtrunA17_Chr3g0098111 30.892 314 198 5 55 359 172 475 2.12e-53 183
Msa1050050 MtrunA17_Chr8g0365811 34.375 288 170 6 68 342 665 946 2.25e-53 189
Msa1050050 MtrunA17_Chr8g0365811 31.387 274 169 6 68 328 183 450 1.03e-44 164
Msa1050050 MtrunA17_Chr1g0207951 35.766 274 153 5 95 359 855 1114 3.62e-53 189
Msa1050050 MtrunA17_Chr1g0207951 33.784 296 176 5 68 356 291 573 4.47e-53 188
Msa1050050 MtrunA17_Chr6g0464871 32.708 373 206 8 16 356 110 469 2.15e-52 180
Msa1050050 MtrunA17_Chr4g0053321 37.405 262 146 6 107 357 229 483 2.48e-51 178
Msa1050050 MtrunA17_Chr6g0464881 34.667 300 179 7 62 354 166 455 3.19e-51 177
Msa1050050 MtrunA17_Chr5g0401721 32.686 309 185 10 62 357 177 475 9.76e-51 176
Msa1050050 MtrunA17_Chr6g0453981 43.979 191 102 3 46 235 45 231 1.33e-50 169
Msa1050050 MtrunA17_Chr6g0464841 32.620 374 203 8 14 353 96 454 2.46e-50 174
Msa1050050 MtrunA17_Chr4g0053501 34.194 310 179 9 62 357 170 468 3.36e-50 175
Msa1050050 MtrunA17_Chr1g0207971 31.419 296 184 5 68 356 173 456 5.67e-50 173
Msa1050050 MtrunA17_Chr8g0377921 33.557 298 172 8 71 350 171 460 1.27e-49 172
Msa1050050 MtrunA17_Chr1g0207831 34.211 266 154 4 103 359 216 469 1.68e-49 172
Msa1050050 MtrunA17_Chr8g0373301 33.550 307 169 7 62 349 172 462 2.43e-49 172
Msa1050050 MtrunA17_Chr7g0249961 35.417 240 136 5 124 355 33 261 3.09e-49 166
Msa1050050 MtrunA17_Chr6g0453941 49.704 169 82 2 46 213 97 263 5.01e-49 166
Msa1050050 MtrunA17_Chr1g0153451 34.494 316 169 9 64 357 171 470 6.83e-49 171
Msa1050050 MtrunA17_Chr1g0207861 32.542 295 184 4 68 353 180 468 8.50e-49 171
Msa1050050 MtrunA17_Chr8g0336691 34.815 270 144 5 100 349 1118 1375 1.67e-48 175
Msa1050050 MtrunA17_Chr8g0336691 30.844 308 179 6 62 349 176 469 2.13e-44 163
Msa1050050 MtrunA17_Chr8g0336691 35.060 251 127 6 100 342 679 901 9.41e-44 161
Msa1050050 MtrunA17_Chr8g0336741 37.597 258 131 6 102 341 214 459 6.54e-48 168
Msa1050050 MtrunA17_Chr6g0462571 32.698 315 177 8 50 349 163 457 1.65e-47 167
Msa1050050 MtrunA17_Chr6g0462521 32.459 305 171 7 65 351 161 448 1.74e-47 167
Msa1050050 MtrunA17_Chr6g0464861 34.333 300 178 6 62 353 165 453 4.15e-47 166
Msa1050050 MtrunA17_Chr8g0336651 33.003 303 167 6 62 342 944 1232 4.28e-47 171
Msa1050050 MtrunA17_Chr8g0336651 34.962 266 143 6 102 349 207 460 1.67e-44 164
Msa1050050 MtrunA17_Chr8g0336651 31.801 261 132 6 100 349 545 770 3.93e-37 142
Msa1050050 MtrunA17_Chr1g0161351 32.095 296 184 4 68 353 209 497 4.94e-47 166
Msa1050050 MtrunA17_Chr7g0232311 31.105 344 199 9 27 350 135 460 5.79e-47 166
Msa1050050 MtrunA17_Chr6g0462541 36.122 263 138 5 101 349 213 459 9.27e-47 165
Msa1050050 MtrunA17_Chr6g0449931 35.621 306 154 8 77 353 176 467 1.11e-46 165
Msa1050050 MtrunA17_Chr8g0339461 34.416 308 166 9 62 346 170 464 1.58e-46 164
Msa1050050 MtrunA17_Chr7g0232411 32.107 299 172 8 72 352 179 464 2.28e-46 164
Msa1050050 MtrunA17_Chr8g0335141 36.803 269 140 8 102 353 213 468 2.50e-46 164
Msa1050050 MtrunA17_Chr8g0339601 33.117 308 170 9 57 341 24 318 3.29e-46 160
Msa1050050 MtrunA17_Chr8g0339631 32.450 302 169 8 62 342 170 457 4.21e-46 163
Msa1050050 MtrunA17_Chr8g0336731 36.704 267 139 7 102 350 233 487 4.24e-46 164
Msa1050050 MtrunA17_Chr6g0462551 33.113 302 173 7 62 349 174 460 4.55e-46 163
Msa1050050 MtrunA17_Chr3g0121991 33.444 302 182 8 68 353 247 545 5.23e-46 164
Msa1050050 MtrunA17_Chr7g0232331 30.897 301 176 8 72 353 179 466 6.34e-46 163
Msa1050050 MtrunA17_Chr7g0232391 32.441 299 171 8 72 352 179 464 6.97e-46 163
Msa1050050 MtrunA17_Chr3g0122001 33.108 296 185 5 71 353 657 952 7.29e-46 167
Msa1050050 MtrunA17_Chr3g0122001 33.555 301 178 7 71 353 177 473 1.95e-44 163
Msa1050050 MtrunA17_Chr7g0218831 34.432 273 153 6 82 350 186 436 8.98e-46 162
Msa1050050 MtrunA17_Chr8g0377941 33.108 296 168 7 71 354 185 462 1.34e-45 162
Msa1050050 MtrunA17_Chr7g0218791 31.347 386 201 14 5 352 87 446 1.47e-45 161
Msa1050050 MtrunA17_Chr6g0486251 33.700 273 147 7 97 349 202 460 2.08e-45 161
Msa1050050 MtrunA17_Chr6g0486201 33.700 273 147 7 97 349 202 460 2.08e-45 161
Msa1050050 MtrunA17_Chr8g0339451 34.304 309 167 9 57 342 157 452 2.24e-45 161
Msa1050050 MtrunA17_Chr7g0232401 31.667 300 171 9 62 342 172 456 3.51e-45 161
Msa1050050 MtrunA17_Chr8g0334851 31.212 330 185 9 41 346 151 462 4.09e-45 161
Msa1050050 MtrunA17_Chr8g0335161 33.443 305 170 9 70 357 180 468 7.28e-45 160
Msa1050050 MtrunA17_Chr7g0265141 34.767 279 154 6 98 354 214 486 9.95e-45 160
Msa1050050 MtrunA17_Chr6g0462531 35.039 254 136 6 102 342 216 453 1.19e-44 159
Msa1050050 MtrunA17_Chr7g0218841 36.364 231 132 5 124 350 218 437 1.72e-44 158
Msa1050050 MtrunA17_Chr3g0079731 32.877 292 152 7 89 351 202 478 4.14e-44 158
Msa1050050 MtrunA17_Chr7g0249931 29.801 302 193 6 62 355 195 485 1.13e-43 157
Msa1050050 MtrunA17_Chr7g0232341 31.164 292 171 7 81 353 186 466 1.16e-43 157
Msa1050050 MtrunA17_Chr7g0265041 33.808 281 162 6 98 358 217 493 1.86e-43 157
Msa1050050 MtrunA17_Chr6g0459311 30.065 306 172 8 72 349 176 467 2.01e-43 156
Msa1050050 MtrunA17_Chr7g0218811 29.630 378 212 10 5 350 91 446 3.09e-43 155
Msa1050050 MtrunA17_Chr1g0153461 38.073 218 116 4 159 357 2 219 3.71e-43 149
Msa1050050 MtrunA17_Chr8g0347281 33.893 298 165 7 62 342 179 461 5.29e-43 155
Msa1050050 MtrunA17_Chr8g0334861 31.068 309 183 8 62 352 166 462 5.55e-43 155
Msa1050050 MtrunA17_Chr8g0380531 29.470 302 192 7 62 353 167 457 6.43e-43 154
Msa1050050 MtrunA17_Chr7g0275681 34.050 279 155 7 98 356 214 483 6.86e-43 155
Msa1050050 MtrunA17_Chr5g0442581 31.861 317 171 8 71 359 183 482 7.25e-43 156
Msa1050050 MtrunA17_Chr7g0275511 35.926 270 141 8 100 349 214 471 1.10e-42 154
Msa1050050 MtrunA17_Chr5g0393591 32.632 285 149 4 72 353 191 435 1.19e-42 154
Msa1050050 MtrunA17_Chr5g0448521 33.333 285 151 8 99 356 198 470 3.27e-42 153
Msa1050050 MtrunA17_Chr8g0374931 31.081 370 206 11 29 353 116 481 3.48e-42 153
Msa1050050 MtrunA17_Chr7g0243931 35.161 310 167 10 73 353 186 490 4.11e-42 153
Msa1050050 MtrunA17_Chr6g0454111 45.283 159 84 2 46 203 27 183 4.38e-42 145
Msa1050050 MtrunA17_Chr8g0347271 33.452 281 157 6 79 342 195 462 5.65e-42 152
Msa1050050 MtrunA17_Chr4g0014061 34.528 307 164 12 68 353 182 472 1.15e-41 152
Msa1050050 MtrunA17_Chr5g0419761 34.629 283 153 9 100 358 216 490 1.41e-41 152
Msa1050050 MtrunA17_Chr4g0060511 36.823 277 149 8 98 353 216 487 1.91e-41 151
Msa1050050 MtrunA17_Chr7g0218821 28.307 378 217 11 5 350 92 447 2.74e-41 150
Msa1050050 MtrunA17_Chr8g0366391 31.458 391 213 13 13 359 107 486 3.38e-41 150
Msa1050050 MtrunA17_Chr4g0072761 29.341 334 210 5 19 351 142 450 3.92e-41 150
Msa1050050 MtrunA17_Chr2g0294921 31.351 370 205 11 29 353 265 630 7.71e-41 152
Msa1050050 MtrunA17_Chr7g0243801 36.879 282 136 10 99 353 210 476 7.83e-41 149
Msa1050050 MtrunA17_Chr5g0432731 31.715 309 186 8 56 355 6 298 7.91e-41 145
Msa1050050 MtrunA17_Chr7g0243631 32.831 332 191 10 44 353 165 486 8.11e-41 150
Msa1050050 MtrunA17_Chr5g0419771 32.374 278 164 6 98 355 241 514 8.65e-41 150
Msa1050050 MtrunA17_Chr4g0072771 28.657 335 211 6 19 351 155 463 9.56e-41 149
Msa1050050 MtrunA17_Chr7g0243871 33.333 336 168 12 47 353 164 472 1.07e-40 149
Msa1050050 MtrunA17_Chr4g0066221 31.367 373 200 12 29 353 116 480 1.40e-40 149
Msa1050050 MtrunA17_Chr5g0442601 32.177 317 168 8 68 356 581 878 1.53e-40 152
Msa1050050 MtrunA17_Chr5g0442601 34.444 180 97 2 126 294 164 333 3.08e-28 116
Msa1050050 MtrunA17_Chr7g0243771 36.879 282 136 10 99 353 209 475 1.54e-40 149
Msa1050050 MtrunA17_Chr8g0374901 34.397 282 151 8 99 353 204 478 3.24e-40 148
Msa1050050 MtrunA17_Chr8g0374941 34.164 281 153 8 99 353 1143 1417 3.91e-40 151
Msa1050050 MtrunA17_Chr8g0374941 33.333 261 146 7 99 335 670 926 5.79e-34 133
Msa1050050 MtrunA17_Chr8g0374941 32.331 266 146 9 99 337 205 463 1.30e-33 132
Msa1050050 MtrunA17_Chr1g0159551 32.222 270 158 6 88 342 189 448 6.21e-40 146
Msa1050050 MtrunA17_Chr1g0179901 33.094 278 161 9 99 355 222 495 1.68e-39 146
Msa1050050 MtrunA17_Chr2g0294931 32.986 288 166 7 89 353 198 481 1.90e-39 146
Msa1050050 MtrunA17_Chr1g0173121 31.985 272 159 7 86 342 191 451 1.99e-39 145
Msa1050050 MtrunA17_Chr8g0339441 37.681 207 110 4 160 347 217 423 2.16e-39 144
Msa1050050 MtrunA17_Chr8g0374971 33.569 283 160 7 95 353 202 480 2.48e-39 145
Msa1050050 MtrunA17_Chr5g0431441 31.731 312 181 8 56 355 176 467 2.77e-39 145
Msa1050050 MtrunA17_Chr7g0243951 34.084 311 168 11 73 353 180 483 3.94e-39 145
Msa1050050 MtrunA17_Chr7g0235051 32.362 343 199 11 32 352 121 452 5.06e-39 144
Msa1050050 MtrunA17_Chr7g0243781 32.087 321 177 9 62 353 167 475 6.99e-39 144
Msa1050050 MtrunA17_Chr5g0431401 30.719 306 181 8 59 353 163 448 7.02e-39 144
Msa1050050 MtrunA17_Chr5g0442521 31.615 291 156 6 89 350 196 472 7.04e-39 144
Msa1050050 MtrunA17_Chr7g0243681 33.555 301 168 10 73 353 191 479 1.24e-38 144
Msa1050050 MtrunA17_Chr4g0066201 31.165 369 202 12 29 355 118 476 1.24e-38 143
Msa1050050 MtrunA17_Chr7g0243851 33.871 310 171 10 73 353 138 442 1.25e-38 143
Msa1050050 MtrunA17_Chr8g0350881 34.164 281 153 7 99 353 206 480 1.53e-38 143
Msa1050050 MtrunA17_Chr8g0361371 30.844 308 167 10 69 350 180 467 1.70e-38 143
Msa1050050 MtrunA17_Chr5g0442541 32.414 290 153 7 89 350 188 462 2.56e-38 142
Msa1050050 MtrunA17_Chr5g0442511 31.010 287 161 7 89 350 216 490 2.64e-38 143
Msa1050050 MtrunA17_Chr5g0428081 32.192 292 171 7 85 353 192 479 3.64e-38 142
Msa1050050 MtrunA17_Chr5g0403641 31.379 290 152 9 102 358 235 510 1.23e-37 141
Msa1050050 MtrunA17_Chr7g0265101 32.014 278 169 7 98 357 215 490 1.44e-37 141
Msa1050050 MtrunA17_Chr5g0431361 30.645 310 184 8 55 353 164 453 1.71e-37 140
Msa1050050 MtrunA17_Chr7g0265151 30.714 280 168 7 100 357 212 487 1.82e-37 140
Msa1050050 MtrunA17_Chr5g0442561 29.114 316 179 9 68 356 178 475 2.09e-37 140
Msa1050050 MtrunA17_Chr4g0066281 33.094 278 158 7 98 353 195 466 4.01e-37 139
Msa1050050 MtrunA17_Chr4g0044501 29.412 391 218 14 13 359 108 484 4.11e-37 139
Msa1050050 MtrunA17_Chr7g0243861 32.877 292 170 8 83 353 201 487 1.47e-36 138
Msa1050050 MtrunA17_Chr5g0442491 30.405 296 163 5 89 356 197 477 2.54e-36 137
Msa1050050 MtrunA17_Chr4g0066151 31.164 292 173 7 86 353 192 479 2.84e-36 137
Msa1050050 MtrunA17_Chr4g0044521 32.593 270 160 8 100 351 199 464 2.86e-36 137
Msa1050050 MtrunA17_Chr4g0066261 30.195 308 187 8 70 353 178 481 3.46e-36 137
Msa1050050 MtrunA17_Chr7g0265051 32.130 277 161 7 102 357 218 488 3.73e-36 137
Msa1050050 MtrunA17_Chr5g0431371 30.719 306 181 8 59 353 163 448 3.90e-36 136
Msa1050050 MtrunA17_Chr5g0429711 32.103 271 154 7 100 357 212 465 6.22e-36 135
Msa1050050 MtrunA17_Chr5g0431421 29.582 311 180 8 59 354 163 449 7.94e-36 135
Msa1050050 MtrunA17_Chr7g0243711 37.383 214 116 6 157 353 104 316 9.32e-36 132
Msa1050050 MtrunA17_Chr4g0066131 31.142 289 159 7 95 353 196 474 1.65e-35 135
Msa1050050 MtrunA17_Chr3g0106251 31.068 309 175 10 59 354 11 294 1.76e-35 131
Msa1050050 MtrunA17_Chr5g0401851 30.189 318 178 10 70 353 176 483 2.11e-35 135
Msa1050050 MtrunA17_Chr6g0463861 30.541 370 205 13 29 353 111 473 2.23e-35 134
Msa1050050 MtrunA17_Chr2g0294941 29.052 327 204 8 33 335 39 361 2.30e-35 132
Msa1050050 MtrunA17_Chr8g0370941 27.358 318 181 7 77 351 176 486 2.39e-35 135
Msa1050050 MtrunA17_Chr8g0334831 31.488 289 144 11 69 323 179 447 5.38e-35 134
Msa1050050 MtrunA17_Chr5g0429681 32.714 269 160 8 100 357 245 503 5.42e-35 134
Msa1050050 MtrunA17_Chr7g0218311 30.822 292 174 8 85 353 197 483 6.66e-35 133
Msa1050050 MtrunA17_Chr5g0410941 29.223 373 209 13 29 353 124 489 9.35e-35 133
Msa1050050 MtrunA17_Chr7g0243761 33.829 269 136 8 99 353 214 454 9.40e-35 132
Msa1050050 MtrunA17_Chr4g0011051 27.688 372 221 9 29 354 119 488 1.11e-34 133
Msa1050050 MtrunA17_Chr6g0463851 31.290 310 182 9 70 353 178 482 1.37e-34 132
Msa1050050 MtrunA17_Chr3g0079711 38.587 184 94 4 187 351 3 186 1.63e-34 125
Msa1050050 MtrunA17_Chr5g0440421 29.231 390 225 14 12 355 111 495 1.80e-34 132
Msa1050050 MtrunA17_Chr2g0302961 31.884 276 150 8 100 353 206 465 4.78e-34 130
Msa1050050 MtrunA17_Chr5g0448551 28.253 269 175 6 56 321 165 418 2.39e-33 129
Msa1050050 MtrunA17_Chr7g0265111 32.234 273 167 5 100 354 244 516 2.51e-33 129
Msa1050050 MtrunA17_Chr3g0106231 29.126 309 185 9 59 354 165 452 4.07e-33 128
Msa1050050 MtrunA17_Chr2g0302991 30.996 271 159 6 100 353 203 462 5.49e-33 127
Msa1050050 MtrunA17_Chr5g0420801 29.508 305 185 10 62 353 171 458 1.29e-32 127
Msa1050050 MtrunA17_Chr8g0355221 31.502 273 166 7 99 353 217 486 1.78e-32 127
Msa1050050 MtrunA17_Chr4g0042891 30.717 293 157 9 90 352 188 464 3.08e-32 125
Msa1050050 MtrunA17_Chr7g0243911 35.961 203 102 6 157 342 18 209 1.14e-31 119
Msa1050050 MtrunA17_Chr4g0066171 30.824 279 165 7 97 353 204 476 2.82e-31 123
Msa1050050 MtrunA17_Chr1g0207881 42.975 121 63 1 228 342 253 373 6.73e-31 120
Msa1050050 MtrunA17_Chr4g0044481 34.653 202 124 4 98 297 205 400 7.10e-31 121
Msa1050050 MtrunA17_Chr5g0416741 28.832 274 176 6 96 353 213 483 1.26e-30 121
Msa1050050 MtrunA17_Chr7g0243611 36.232 207 121 7 100 300 76 277 3.79e-30 117
Msa1050050 MtrunA17_Chr8g0369341 28.571 308 185 10 62 353 180 468 4.81e-30 119
Msa1050050 MtrunA17_Chr1g0165701 31.835 267 154 8 104 353 228 483 6.59e-30 119
Msa1050050 MtrunA17_Chr8g0382021 32.161 199 119 4 160 342 279 477 1.04e-29 119
Msa1050050 MtrunA17_Chr4g0042931 29.562 274 165 8 96 352 200 462 2.24e-29 117
Msa1050050 MtrunA17_Chr7g0243811 31.641 256 152 7 57 300 137 381 3.74e-29 116
Msa1050050 MtrunA17_Chr2g0307961 31.179 263 163 8 99 354 218 469 5.07e-29 117
Msa1050050 MtrunA17_Chr8g0361411 30.116 259 167 7 102 353 202 453 1.46e-28 115
Msa1050050 MtrunA17_Chr6g0463891 29.151 271 173 6 99 353 217 484 2.02e-28 115
Msa1050050 MtrunA17_Chr5g0427561 57.143 84 36 0 271 354 2 85 2.41e-27 103
Msa1050050 MtrunA17_Chr5g0416821 30.566 265 165 9 99 353 218 473 7.57e-27 110
Msa1050050 MtrunA17_Chr2g0329111 29.572 257 156 8 98 339 213 459 4.58e-26 108
Msa1050050 MtrunA17_Chr8g0337381 45.455 121 60 2 233 349 3 121 1.04e-25 100
Msa1050050 MtrunA17_Chr4g0029131 29.134 254 150 6 95 334 203 440 1.08e-25 108
Msa1050050 MtrunA17_Chr5g0431431 31.641 256 151 8 56 309 110 343 1.28e-25 105
Msa1050050 MtrunA17_Chr1g0196851 27.566 341 206 11 16 334 159 480 3.59e-25 106
Msa1050050 MtrunA17_Chr7g0232351 31.250 224 126 7 62 271 169 378 6.50e-25 104
Msa1050050 MtrunA17_Chr2g0278721 31.559 263 154 9 104 358 734 978 8.14e-25 106
Msa1050050 MtrunA17_Chr2g0278721 28.571 238 146 8 103 330 220 443 3.18e-18 86.3
Msa1050050 MtrunA17_Chr5g0409591 28.455 246 145 8 102 320 212 453 1.21e-24 104
Msa1050050 MtrunA17_Chr6g0454391 65.625 64 22 0 246 309 11 74 5.52e-24 95.5
Msa1050050 MtrunA17_Chr6g0482061 28.716 296 181 8 62 341 186 467 1.57e-23 101
Msa1050050 MtrunA17_Chr7g0241801 32.432 185 106 6 155 330 232 406 3.19e-23 100
Msa1050050 MtrunA17_Chr7g0241781 32.275 189 109 6 155 334 232 410 3.48e-23 100
Msa1050050 MtrunA17_Chr5g0427571 31.602 231 146 8 100 322 42 268 4.84e-23 97.8
Msa1050050 MtrunA17_Chr7g0231631 28.405 257 169 7 104 353 11 259 7.51e-23 96.7
Msa1050050 MtrunA17_Chr8g0357361 30.542 203 131 5 96 296 57 251 1.50e-22 95.5
Msa1050050 MtrunA17_Chr3g0118731 85.417 48 7 0 2 49 55 102 1.76e-22 92.8
Msa1050050 MtrunA17_Chr8g0336251 31.197 234 149 6 100 327 212 439 4.89e-22 97.1
Msa1050050 MtrunA17_Chr8g0336321 31.197 234 149 6 100 327 212 439 4.94e-22 97.1
Msa1050050 MtrunA17_Chr3g0092031 31.953 169 105 4 163 325 6 170 5.77e-22 92.4
Msa1050050 MtrunA17_Chr4g0069611 29.362 235 146 7 104 330 216 438 1.34e-21 95.5
Msa1050050 MtrunA17_Chr4g0040691 26.415 265 171 8 99 354 209 458 8.16e-21 93.2
Msa1050050 MtrunA17_Chr2g0283041 29.213 178 118 3 161 330 256 433 8.46e-21 93.2
Msa1050050 MtrunA17_Chr4g0029151 30.270 185 117 4 162 334 264 448 1.22e-20 92.8
Msa1050050 MtrunA17_Chr4g0066141 36.306 157 83 4 214 353 195 351 1.27e-20 91.7
Msa1050050 MtrunA17_Chr2g0302851 30.417 240 139 8 103 330 216 439 1.42e-20 92.8
Msa1050050 MtrunA17_Chr8g0367221 30.168 179 109 4 162 329 1547 1720 8.53e-20 91.3
Msa1050050 MtrunA17_Chr8g0367221 33.140 172 103 5 162 324 1057 1225 1.86e-19 90.1
Msa1050050 MtrunA17_Chr8g0367221 33.333 156 91 5 155 304 261 409 3.92e-19 89.4
Msa1050050 MtrunA17_Chr4g0039881 29.362 235 146 7 104 330 193 415 9.07e-20 90.1
Msa1050050 MtrunA17_Chr6g0464091 28.926 242 154 8 60 296 181 409 5.00e-19 88.2
Msa1050050 MtrunA17_Chr4g0040711 26.923 234 150 5 99 324 209 429 9.28e-19 87.4
Msa1050050 MtrunA17_Chr6g0466831 26.966 267 164 10 104 357 219 467 1.52e-18 86.7
Msa1050050 MtrunA17_Chr8g0336271 34.839 155 64 1 2 119 90 244 1.91e-18 84.3
Msa1050050 MtrunA17_Chr6g0466841 24.809 262 176 8 104 357 219 467 1.55e-17 83.6
Msa1050050 MtrunA17_Chr2g0278741 29.412 238 142 9 104 330 303 525 1.77e-17 83.6
Msa1050050 MtrunA17_Chr2g0319791 30.636 173 111 4 161 324 257 429 1.71e-16 80.5
Msa1050050 MtrunA17_Chr2g0319761 29.353 201 132 5 163 354 259 458 1.99e-16 80.1
Msa1050050 MtrunA17_Chr7g0243731 47.059 68 35 1 230 296 6 73 3.64e-15 70.1
Msa1050050 MtrunA17_Chr6g0454381 37.931 87 54 0 46 132 45 131 9.62e-15 70.9
Msa1050050 MtrunA17_Chr2g0319731 29.825 171 111 4 163 324 276 446 1.47e-14 74.7
Msa1050050 MtrunA17_Chr2g0319751 27.317 205 139 5 161 356 734 937 3.35e-14 73.9
Msa1050050 MtrunA17_Chr2g0319751 26.471 204 116 6 161 355 257 435 2.49e-12 68.2
Msa1050050 MtrunA17_Chr2g0319801 29.240 171 112 4 163 324 259 429 5.80e-14 72.8
Msa1050050 MtrunA17_Chr4g0029161 24.506 253 135 6 95 334 203 412 5.83e-14 72.8
Msa1050050 MtrunA17_Chr2g0321331 29.012 162 90 5 171 324 94 238 2.14e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1050050 AT1G22380.1 44.501 391 178 4 2 354 92 481 1.41e-119 355
Msa1050050 AT1G22340.1 42.132 394 190 2 2 357 92 485 1.82e-117 349
Msa1050050 AT1G22360.1 42.711 391 185 3 2 354 89 478 6.07e-117 347
Msa1050050 AT1G22400.1 43.367 392 182 4 2 354 92 482 1.52e-116 347
Msa1050050 AT1G22370.2 45.337 386 177 4 2 354 92 476 8.66e-115 342
Msa1050050 AT1G22360.2 40.921 391 180 4 2 354 89 466 3.24e-108 325
Msa1050050 AT1G22370.1 49.342 304 152 2 52 354 4 306 3.00e-105 311
Msa1050050 AT1G78270.1 41.432 391 190 5 2 354 92 481 3.85e-104 315
Msa1050050 AT5G59590.1 36.538 312 177 6 47 353 154 449 6.82e-64 210
Msa1050050 AT5G59580.1 37.500 296 169 5 64 357 170 451 6.77e-63 207
Msa1050050 AT3G46680.1 37.457 291 166 6 62 350 170 446 2.09e-61 204
Msa1050050 AT3G46700.1 36.667 300 175 5 56 353 158 444 4.86e-61 202
Msa1050050 AT3G46690.1 37.110 353 191 9 10 353 119 449 5.08e-61 202
Msa1050050 AT5G38040.1 36.755 302 171 6 56 353 164 449 1.23e-60 201
Msa1050050 AT2G36970.1 33.887 301 181 5 59 353 182 470 8.37e-60 200
Msa1050050 AT3G46650.1 33.791 364 205 9 8 355 87 430 1.04e-59 199
Msa1050050 AT3G11340.1 33.600 375 205 7 10 354 85 445 3.13e-59 198
Msa1050050 AT3G46660.1 38.983 295 154 7 68 353 181 458 5.96e-59 197
Msa1050050 AT5G38010.1 37.374 297 168 5 60 353 172 453 1.41e-58 196
Msa1050050 AT3G46670.1 38.224 259 143 4 100 356 204 447 6.51e-58 194
Msa1050050 AT1G05680.1 38.351 279 154 5 72 342 173 441 3.47e-57 192
Msa1050050 AT4G15500.1 36.782 261 148 4 102 354 212 463 4.31e-57 193
Msa1050050 AT1G05675.1 35.889 287 166 5 72 350 173 449 2.99e-56 190
Msa1050050 AT4G15480.1 33.030 330 189 9 36 353 169 478 3.05e-56 191
Msa1050050 AT3G55710.1 36.275 306 175 9 60 358 167 459 3.54e-55 187
Msa1050050 AT3G21560.1 32.890 301 184 6 62 353 181 472 5.17e-55 188
Msa1050050 AT5G05880.1 29.948 384 221 9 1 350 76 445 1.12e-53 183
Msa1050050 AT5G05890.1 30.446 381 213 9 8 350 83 449 1.92e-53 183
Msa1050050 AT3G46720.1 36.054 294 165 5 62 353 168 440 2.11e-53 182
Msa1050050 AT2G31750.1 33.553 304 182 6 62 355 163 456 2.89e-52 180
Msa1050050 AT4G15490.1 33.110 299 177 6 68 354 180 467 7.45e-52 179
Msa1050050 AT2G31750.2 33.553 304 182 6 62 355 163 456 8.86e-52 179
Msa1050050 AT2G28080.1 33.439 314 194 5 44 354 171 472 1.13e-51 179
Msa1050050 AT5G05870.1 30.287 383 215 8 10 353 85 454 1.28e-51 178
Msa1050050 AT2G26480.1 34.948 289 173 6 69 354 170 446 1.53e-51 177
Msa1050050 AT3G55700.1 33.876 307 184 7 56 358 164 455 5.20e-51 176
Msa1050050 AT5G17040.2 31.833 311 187 5 50 354 47 338 6.91e-51 173
Msa1050050 AT4G01070.1 37.023 262 134 5 100 342 207 456 7.92e-50 174
Msa1050050 AT5G17050.1 30.132 302 194 3 55 355 173 458 1.71e-49 172
Msa1050050 AT5G05860.1 31.915 376 215 9 9 354 84 448 2.26e-48 169
Msa1050050 AT2G31790.1 32.177 317 192 6 34 342 144 445 3.23e-48 169
Msa1050050 AT5G05900.1 28.021 389 221 9 1 350 76 444 1.62e-47 167
Msa1050050 AT2G15490.3 35.985 264 155 4 100 353 218 477 3.22e-47 167
Msa1050050 AT5G17040.1 31.683 303 182 5 58 354 157 440 3.51e-47 166
Msa1050050 AT4G34131.1 34.106 302 175 7 70 353 184 479 6.94e-47 166
Msa1050050 AT2G43820.1 29.296 355 209 9 29 353 104 446 1.86e-46 164
Msa1050050 AT2G15490.1 35.581 267 155 5 100 353 218 480 4.26e-46 164
Msa1050050 AT2G15480.1 34.848 264 158 4 100 353 221 480 1.17e-45 163
Msa1050050 AT1G30530.1 30.592 304 194 4 52 354 164 451 1.80e-45 162
Msa1050050 AT5G17030.1 28.477 302 201 3 55 355 170 457 2.89e-45 161
Msa1050050 AT3G53160.1 30.645 372 208 9 31 357 120 486 2.91e-45 162
Msa1050050 AT2G43840.2 29.261 352 213 10 29 353 104 446 1.57e-44 159
Msa1050050 AT2G43840.1 29.261 352 213 10 29 353 104 446 3.80e-44 158
Msa1050050 AT2G23250.1 31.208 298 175 11 68 353 156 435 5.25e-44 157
Msa1050050 AT2G15480.2 33.942 274 157 5 100 353 221 490 5.28e-44 159
Msa1050050 AT1G05560.1 29.348 368 207 9 29 359 106 457 6.32e-44 158
Msa1050050 AT1G05560.2 29.558 362 202 9 29 353 156 501 1.17e-43 158
Msa1050050 AT2G36780.1 35.766 274 154 6 100 355 221 490 1.93e-43 157
Msa1050050 AT2G36770.1 34.909 275 157 6 100 356 221 491 3.00e-43 156
Msa1050050 AT4G15550.1 32.000 300 172 6 68 352 190 472 4.06e-43 155
Msa1050050 AT2G36800.1 33.232 328 192 9 47 355 170 489 5.82e-43 155
Msa1050050 AT2G36760.1 34.182 275 159 6 100 356 221 491 5.91e-43 155
Msa1050050 AT2G36750.1 35.766 274 154 6 100 355 216 485 6.37e-43 155
Msa1050050 AT3G16520.3 32.390 318 188 10 45 351 156 457 1.85e-42 154
Msa1050050 AT5G26310.1 30.409 342 181 13 45 352 148 466 3.67e-42 153
Msa1050050 AT1G01420.1 34.538 249 133 6 100 330 207 443 1.61e-41 152
Msa1050050 AT1G01420.2 34.538 249 133 6 100 330 210 446 1.85e-41 151
Msa1050050 AT5G66690.1 29.464 336 192 9 45 352 148 466 1.93e-41 151
Msa1050050 AT5G14860.1 34.266 286 158 8 81 353 207 475 2.56e-41 151
Msa1050050 AT1G24100.1 31.148 305 186 8 62 353 165 458 3.16e-41 150
Msa1050050 AT2G23260.1 29.866 298 184 9 68 353 169 453 5.72e-41 149
Msa1050050 AT2G36790.1 36.131 274 153 6 100 355 220 489 8.15e-41 150
Msa1050050 AT4G34135.1 32.673 303 179 6 70 353 185 481 8.61e-41 150
Msa1050050 AT3G16520.1 32.776 299 174 10 45 332 156 438 3.24e-40 147
Msa1050050 AT3G16520.2 33.214 280 163 8 45 313 156 422 3.31e-40 147
Msa1050050 AT4G36770.1 33.209 268 138 8 96 338 197 448 4.30e-40 147
Msa1050050 AT4G14090.1 32.881 295 172 9 68 352 176 454 6.93e-40 147
Msa1050050 AT1G05530.1 30.323 310 182 9 65 354 160 455 4.22e-39 144
Msa1050050 AT3G50740.1 29.755 326 177 9 62 355 170 475 4.93e-39 145
Msa1050050 AT1G01390.2 33.218 289 158 8 79 346 203 477 8.00e-39 144
Msa1050050 AT1G01390.1 33.218 289 158 8 79 346 186 460 8.04e-39 144
Msa1050050 AT4G34138.1 31.788 302 181 6 70 353 184 478 2.49e-38 143
Msa1050050 AT2G18570.1 31.250 304 158 10 81 351 179 464 4.71e-38 142
Msa1050050 AT3G02100.1 34.252 254 141 6 103 351 228 460 8.03e-38 141
Msa1050050 AT2G18560.1 32.566 304 154 12 81 351 89 374 1.78e-37 139
Msa1050050 AT2G16890.2 33.212 274 148 9 95 353 214 467 1.98e-37 140
Msa1050050 AT1G10400.1 35.714 266 142 10 99 353 215 462 2.18e-37 140
Msa1050050 AT5G37950.2 38.605 215 114 5 60 271 138 337 3.18e-37 137
Msa1050050 AT2G30140.2 30.671 313 176 9 59 357 169 454 3.49e-37 139
Msa1050050 AT2G30140.1 30.671 313 176 9 59 357 170 455 4.39e-37 139
Msa1050050 AT5G37950.1 38.605 215 114 5 60 271 144 343 4.47e-37 137
Msa1050050 AT3G21790.1 29.714 350 199 11 27 353 153 478 1.50e-36 138
Msa1050050 AT2G30150.1 27.919 394 214 9 2 353 71 436 7.05e-36 135
Msa1050050 AT2G30150.2 28.426 394 212 11 2 353 87 452 7.13e-36 136
Msa1050050 AT3G21800.1 31.673 281 156 7 102 358 212 480 3.34e-35 134
Msa1050050 AT2G29730.1 28.571 266 167 5 99 354 211 463 3.78e-35 134
Msa1050050 AT2G29710.1 28.679 265 169 5 99 354 210 463 5.83e-35 134
Msa1050050 AT4G15260.1 29.352 293 170 6 89 358 81 359 2.00e-34 130
Msa1050050 AT1G07250.1 31.203 266 161 5 100 354 219 473 5.44e-34 131
Msa1050050 AT3G22250.1 34.300 207 122 4 121 323 239 435 5.75e-34 130
Msa1050050 AT3G21780.1 30.479 292 169 8 89 358 194 473 1.01e-33 130
Msa1050050 AT1G07240.1 30.258 271 161 7 100 354 218 476 1.33e-33 130
Msa1050050 AT4G15280.1 30.314 287 159 9 96 356 205 476 4.53e-33 128
Msa1050050 AT4G15280.2 30.314 287 159 9 96 356 237 508 5.51e-33 129
Msa1050050 AT3G21760.1 27.941 340 198 10 38 353 164 480 1.17e-32 127
Msa1050050 AT3G53150.1 30.034 293 156 8 102 356 231 512 1.37e-32 127
Msa1050050 AT1G07260.1 29.213 267 166 5 100 354 217 472 1.74e-32 127
Msa1050050 AT2G29740.1 30.469 256 153 7 100 343 222 464 2.25e-32 126
Msa1050050 AT3G21750.1 26.452 310 185 6 73 356 179 471 4.27e-31 123
Msa1050050 AT5G03490.1 31.783 258 149 8 104 353 224 462 7.11e-31 122
Msa1050050 AT2G29750.1 29.670 273 164 7 100 359 222 479 2.02e-29 118
Msa1050050 AT1G73880.1 26.621 293 197 6 69 354 186 467 3.50e-28 115
Msa1050050 AT2G16890.3 31.004 229 124 8 95 309 214 422 3.21e-26 108
Msa1050050 AT1G51210.1 30.337 267 157 8 69 327 186 431 3.24e-25 106
Msa1050050 AT5G65550.1 32.778 180 103 4 162 331 269 440 2.56e-24 103
Msa1050050 AT5G54010.1 29.208 202 135 4 162 356 249 449 4.64e-23 100
Msa1050050 AT5G49690.1 32.941 170 100 4 162 325 266 427 1.16e-22 99.0
Msa1050050 AT5G12890.1 33.333 207 116 8 155 342 267 470 1.17e-22 99.4
Msa1050050 AT4G27560.1 28.358 201 136 4 161 354 248 447 3.49e-21 94.7
Msa1050050 AT4G27570.1 29.944 177 117 3 161 330 248 424 1.02e-20 93.6
Msa1050050 AT1G06000.1 26.100 341 219 12 36 353 103 433 1.47e-20 92.8
Msa1050050 AT1G64910.1 31.361 169 109 3 163 324 244 412 2.55e-20 92.0
Msa1050050 AT5G53990.1 33.566 143 90 2 163 304 244 382 5.43e-20 91.3
Msa1050050 AT5G54060.1 28.571 259 160 7 86 335 206 448 2.51e-19 89.4
Msa1050050 AT3G29630.1 26.971 241 155 6 68 306 165 386 1.13e-18 87.4
Msa1050050 AT4G09500.1 27.429 175 120 3 163 330 219 393 4.17e-18 85.5
Msa1050050 AT4G09500.2 26.316 209 138 6 135 330 213 418 4.22e-18 85.5
Msa1050050 AT2G22590.1 32.571 175 110 4 162 329 273 446 1.32e-17 84.3
Msa1050050 AT3G29630.2 31.724 145 94 2 163 306 220 360 2.75e-17 83.2
Msa1050050 AT2G22930.1 26.857 175 121 3 163 330 244 418 5.60e-17 82.4
Msa1050050 AT1G64920.1 22.936 327 219 10 42 352 138 447 1.98e-16 80.5
Msa1050050 AT1G50580.1 31.469 143 93 2 163 304 245 383 3.15e-15 77.0
Msa1050050 AT4G34135.2 32.192 146 87 3 70 207 185 326 5.53e-15 75.5
Msa1050050 AT4G01070.2 31.034 145 74 3 100 230 207 339 2.18e-13 70.9

Find 70 sgRNAs with CRISPR-Local

Find 451 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATAAAATGGTTGAGTAAA+TGG 0.151034 7_2:-13890488 Msa1050050:CDS
TTATGCAACACTTGGAAAAT+AGG 0.198741 7_2:-13890111 Msa1050050:CDS
TCTTCACCCATTACTATATC+TGG 0.244649 7_2:+13890345 None:intergenic
GTGAAGCCCTTGACACTCTT+AGG 0.263527 7_2:-13890629 Msa1050050:CDS
CATCATTTCCACAACAAGTT+TGG 0.310409 7_2:+13890050 None:intergenic
ATGACTCAGAATGCATAAAA+TGG 0.312996 7_2:-13890500 Msa1050050:CDS
CAGGTCTGCCTACTATTTGT+TGG 0.330319 7_2:-13890170 Msa1050050:CDS
TATGCAACACTTGGAAAATA+GGG 0.331166 7_2:-13890110 Msa1050050:CDS
ACACTTGAAGCAATTTCTTC+AGG 0.336883 7_2:-13890189 Msa1050050:CDS
GGGCCAATGCTATATATGTT+AGG 0.343893 7_2:+13890597 None:intergenic
CTGAGCAACAAACAAATTGT+AGG 0.353752 7_2:-13890137 Msa1050050:CDS
CTAGATGAGGTTAAGGATAG+AGG 0.357626 7_2:-13890297 Msa1050050:CDS
GAAATGATGGAAGGAGAAAA+AGG 0.360157 7_2:-13890036 Msa1050050:CDS
GATGGCAATTATGACTTTGC+TGG 0.363761 7_2:-13897517 Msa1050050:CDS
TCAGTACTATATATTAATTA+TGG 0.370543 7_2:-13890456 Msa1050050:CDS
TCAGCAATTATACAAGTAAC+TGG 0.373014 7_2:+13897538 None:intergenic
AACACATTTGAAGAATTAGA+AGG 0.379838 7_2:-13890651 Msa1050050:CDS
ATCACTTGAAAGAATTTGCT+TGG 0.385257 7_2:-13890410 Msa1050050:CDS
CCTTGGATACAAGTTTAGAT+TGG 0.405206 7_2:-13890806 Msa1050050:CDS
ACAAGTTTAGATTGGATCTC+TGG 0.407043 7_2:-13890798 Msa1050050:CDS
AATTCCAACCACAATGAGTT+AGG 0.409400 7_2:+13890214 None:intergenic
TCACTTGAAAGAATTTGCTT+GGG 0.413893 7_2:-13890409 Msa1050050:CDS
CATAAAATGGTTGAGTAAAT+GGG 0.417737 7_2:-13890487 Msa1050050:CDS
CAATGTTGTGTGATTCAACT+AGG 0.436379 7_2:-13897624 Msa1050050:CDS
CTTGCTCATCCATCAGTTGG+AGG 0.436717 7_2:-13890240 Msa1050050:CDS
AAATTAACTATGATGTGAAA+AGG 0.437634 7_2:-13890083 Msa1050050:CDS
CTGATGGATGAGCAAGAACT+TGG 0.444290 7_2:+13890247 None:intergenic
AATTAACTATGATGTGAAAA+GGG 0.466340 7_2:-13890082 Msa1050050:CDS
ATGAGGCCAGATATAGTAAT+GGG 0.468666 7_2:-13890351 Msa1050050:CDS
GTTTGTTGCTCAGCAAAGAA+AGG 0.473094 7_2:+13890147 None:intergenic
AAGAAAGGCCAACAAATAGT+AGG 0.487158 7_2:+13890162 None:intergenic
CAAACTTGTTGTGGAAATGA+TGG 0.488894 7_2:-13890049 Msa1050050:CDS
GGCCAATGCTATATATGTTA+GGG 0.499318 7_2:+13890598 None:intergenic
ATACAAGTAACTGGAATATG+AGG 0.502466 7_2:+13897547 None:intergenic
TGAAGCCCTTGACACTCTTA+GGG 0.503720 7_2:-13890628 Msa1050050:CDS
AGAGATGAGACAAAATTGCT+TGG 0.504567 7_2:-13890010 Msa1050050:CDS
TTGCTCATCCATCAGTTGGA+GGG 0.515334 7_2:-13890239 Msa1050050:CDS
CCAATCTAAACTTGTATCCA+AGG 0.516376 7_2:+13890806 None:intergenic
GTTCTTGCTCATCCATCAGT+TGG 0.519428 7_2:-13890243 Msa1050050:CDS
ATTGGCCCACTTCACATGCT+TGG 0.521488 7_2:-13890582 Msa1050050:CDS
CTAGTTGAATCACACAACAT+TGG 0.524951 7_2:+13897625 None:intergenic
TATGACTTTGCTGGAAGAGT+GGG 0.525317 7_2:-13897508 Msa1050050:intron
ACAAAATTGTGTGAGATCAT+CGG 0.529236 7_2:-13890685 Msa1050050:CDS
TCAGTGATTCTAATGAAGCT+TGG 0.535128 7_2:+13890747 None:intergenic
CACTTGAAAGAATTTGCTTG+GGG 0.540858 7_2:-13890408 Msa1050050:CDS
GGTTCCTAACTCATTGTGGT+TGG 0.541326 7_2:-13890218 Msa1050050:CDS
AGAGATAACCAAACTTGTTG+TGG 0.542980 7_2:-13890058 Msa1050050:CDS
ATAGAGGATACATAACTAGT+TGG 0.545228 7_2:-13890281 Msa1050050:CDS
GCCTACCAAGCATGTGAAGT+GGG 0.545551 7_2:+13890577 None:intergenic
TGATTCTAATGAAGCTTGGA+AGG 0.547294 7_2:+13890751 None:intergenic
AGCTACAGATGCTACTAATG+TGG 0.548442 7_2:-13889974 Msa1050050:CDS
AGCCCTAACATATATAGCAT+TGG 0.552169 7_2:-13890600 Msa1050050:CDS
GTTACTTGTATAATTGCTGA+TGG 0.554672 7_2:-13897535 Msa1050050:CDS
GTAGGTATTTATGCAACACT+TGG 0.560031 7_2:-13890119 Msa1050050:CDS
GTTAGGAACCCTCCAACTGA+TGG 0.561564 7_2:+13890231 None:intergenic
GGAGGGTTCCTAACTCATTG+TGG 0.564364 7_2:-13890222 Msa1050050:CDS
TGAGACAAAATTGCTTGGAG+TGG 0.568580 7_2:-13890005 Msa1050050:CDS
TTATGACTTTGCTGGAAGAG+TGG 0.571412 7_2:-13897509 Msa1050050:CDS
ACTTGTATCCAAGGTGCCAT+CGG 0.578172 7_2:+13890815 None:intergenic
TTTAGCCCTAAGAGTGTCAA+GGG 0.579197 7_2:+13890623 None:intergenic
CAACACTTGGAAAATAGGGA+TGG 0.580082 7_2:-13890106 Msa1050050:CDS
GCTACAGATGCTACTAATGT+GGG 0.582080 7_2:-13889973 Msa1050050:CDS
AATGAGGCCAGATATAGTAA+TGG 0.584372 7_2:-13890352 Msa1050050:CDS
GCCCACTTCACATGCTTGGT+AGG 0.589057 7_2:-13890578 Msa1050050:CDS
TTAATCACGAGCTCTTTGAA+AGG 0.592339 7_2:+13897586 None:intergenic
TTAATATATAGTACTGAGCA+AGG 0.597770 7_2:+13890462 None:intergenic
TGCCTACCAAGCATGTGAAG+TGG 0.610099 7_2:+13890576 None:intergenic
ACCTCATCTAGAAAATCTTG+TGG 0.633955 7_2:+13890309 None:intergenic
CTTGTTGTGGAAATGATGGA+AGG 0.654423 7_2:-13890045 Msa1050050:CDS
ACAGATGCTACTAATGTGGG+AGG 0.700783 7_2:-13889970 Msa1050050:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAACTAATTTTTTTCATTAA+AGG - chr7_2:13890551-13890570 Msa1050050:CDS 10.0%
!!! AAATTATAAAAAGATTTTTC+TGG - chr7_2:13890944-13890963 Msa1050050:intron 10.0%
!!! AATTATAAAAAGATTTTTCT+GGG - chr7_2:13890945-13890964 Msa1050050:intron 10.0%
!! CTAAATAATATAAAATTGAT+GGG + chr7_2:13891322-13891341 None:intergenic 10.0%
!!! GTATTATTTTAATAATACAA+TGG - chr7_2:13891911-13891930 Msa1050050:intron 10.0%
!!! ACAATACTTAATTTTATTAT+TGG + chr7_2:13892091-13892110 None:intergenic 10.0%
!!! TAACTAATTTTTTTCATTAA+AGG - chr7_2:13890551-13890570 Msa1050050:CDS 10.0%
!!! TTATTTTTTGAAATATACTT+AGG + chr7_2:13894755-13894774 None:intergenic 10.0%
!! ATCTGTAAAAAATAAATTAA+TGG - chr7_2:13895194-13895213 Msa1050050:intron 10.0%
!! ACAAATTATATTTATAACTA+TGG - chr7_2:13895546-13895565 Msa1050050:intron 10.0%
!! CAAATTATATTTATAACTAT+GGG - chr7_2:13895547-13895566 Msa1050050:intron 10.0%
!! TAAAAAAAAAAATATCAGTT+GGG + chr7_2:13896168-13896187 None:intergenic 10.0%
!!! ATTCTAAAATAAAGAAATAA+AGG + chr7_2:13896301-13896320 None:intergenic 10.0%
!! ATTAAAATCAATATAAACAA+AGG + chr7_2:13896479-13896498 None:intergenic 10.0%
!! AATAAAGAGAAATAAAGTAA+AGG - chr7_2:13890154-13890173 Msa1050050:CDS 15.0%
!!! TTAAAACTTTTGAAATATGT+GGG + chr7_2:13890921-13890940 None:intergenic 15.0%
!!! TTTAAAACTTTTGAAATATG+TGG + chr7_2:13890922-13890941 None:intergenic 15.0%
!! GCTAAATAATATAAAATTGA+TGG + chr7_2:13891323-13891342 None:intergenic 15.0%
!! ACTTATAAATTTATTCTCAT+TGG - chr7_2:13891701-13891720 Msa1050050:intron 15.0%
!! ATTGTATTATTTGAATACAA+TGG - chr7_2:13891744-13891763 Msa1050050:intron 15.0%
!! GAATTTCTATTAAATTTGAA+GGG + chr7_2:13892334-13892353 None:intergenic 15.0%
!! TGAATTTCTATTAAATTTGA+AGG + chr7_2:13892335-13892354 None:intergenic 15.0%
!!! TATATGACATTATTTTGTTT+TGG + chr7_2:13892545-13892564 None:intergenic 15.0%
!! AAACAAAATAATGTCATATA+AGG - chr7_2:13892545-13892564 Msa1050050:intron 15.0%
!! AAATATACATGTAATAAGAT+GGG - chr7_2:13892580-13892599 Msa1050050:intron 15.0%
!!! TTTACTATATTTTAGTTTGT+TGG + chr7_2:13892630-13892649 None:intergenic 15.0%
!! AACAAACTAAAATATAGTAA+AGG - chr7_2:13892629-13892648 Msa1050050:intron 15.0%
!! ATAAATTGATCTTTATAAGA+AGG - chr7_2:13893184-13893203 Msa1050050:intron 15.0%
!! AATAAAGAGAAATAAAGTAA+AGG - chr7_2:13890154-13890173 Msa1050050:CDS 15.0%
!! TATATAATGTATCTAAAAAG+TGG + chr7_2:13894540-13894559 None:intergenic 15.0%
!!! TTATTTTTTCTAAAGAGTAT+TGG - chr7_2:13894707-13894726 Msa1050050:intron 15.0%
!! TTATACATTCATAATATTCA+TGG - chr7_2:13894953-13894972 Msa1050050:intron 15.0%
!!! TTTTTGTTTTGATAAAAACA+TGG - chr7_2:13895369-13895388 Msa1050050:intron 15.0%
!!! TTTTCCATAGTTTTAAAAAT+CGG + chr7_2:13895752-13895771 None:intergenic 15.0%
!! GTAAAAAAAAAAATATCAGT+TGG + chr7_2:13896169-13896188 None:intergenic 15.0%
!! TCAGTACTATATATTAATTA+TGG - chr7_2:13897075-13897094 Msa1050050:intron 15.0%
!!! ACTTTATTTCTCTTTATTAG+TGG + chr7_2:13890152-13890171 None:intergenic 20.0%
!! ATCAAAAATATTGAGTTTCT+GGG + chr7_2:13890422-13890441 None:intergenic 20.0%
!! AATCAAAAATATTGAGTTTC+TGG + chr7_2:13890423-13890442 None:intergenic 20.0%
!!! CTATTTATTAGCCAATTTTA+AGG + chr7_2:13890696-13890715 None:intergenic 20.0%
!! CTTAAAATTGGCTAATAAAT+AGG - chr7_2:13890694-13890713 Msa1050050:CDS 20.0%
!! TTATTTAACAATTCTCCAAA+AGG + chr7_2:13890771-13890790 None:intergenic 20.0%
!!! TCTTTCATAAAAGCATATAA+TGG - chr7_2:13890796-13890815 Msa1050050:CDS 20.0%
!!! ATAAAAGCATATAATGGAAA+TGG - chr7_2:13890802-13890821 Msa1050050:CDS 20.0%
!!! TAAAACTTTTGAAATATGTG+GGG + chr7_2:13890920-13890939 None:intergenic 20.0%
!!! GTTAACTTGATGAAATATTA+GGG + chr7_2:13891593-13891612 None:intergenic 20.0%
!!! TGTTAACTTGATGAAATATT+AGG + chr7_2:13891594-13891613 None:intergenic 20.0%
!! TCTTCATAATAAATTCATAC+AGG - chr7_2:13891627-13891646 Msa1050050:intron 20.0%
!! TATGAGATATTGTTTAAAAG+TGG + chr7_2:13891775-13891794 None:intergenic 20.0%
!!! GACTTTTTGATATATGTAAT+CGG - chr7_2:13891807-13891826 Msa1050050:intron 20.0%
!!! ACTTTTTGATATATGTAATC+GGG - chr7_2:13891808-13891827 Msa1050050:intron 20.0%
!!! GTTTGATTTATTTATATGAG+TGG + chr7_2:13891885-13891904 None:intergenic 20.0%
!! AATAGACATGTATATTGTTA+TGG + chr7_2:13891988-13892007 None:intergenic 20.0%
!! TAATGTGATCAATTTATTGT+GGG + chr7_2:13892194-13892213 None:intergenic 20.0%
!! ATAATGTGATCAATTTATTG+TGG + chr7_2:13892195-13892214 None:intergenic 20.0%
!!! GATTGATTTATACATGTTTA+GGG + chr7_2:13892293-13892312 None:intergenic 20.0%
!!! TGATTGATTTATACATGTTT+AGG + chr7_2:13892294-13892313 None:intergenic 20.0%
!! CAAATATACATGTAATAAGA+TGG - chr7_2:13892579-13892598 Msa1050050:intron 20.0%
!! TTTCTCTTGGATTAATAAAA+CGG + chr7_2:13892743-13892762 None:intergenic 20.0%
!! AAATTAACTACCATCATATA+TGG - chr7_2:13892761-13892780 Msa1050050:intron 20.0%
!!! TTATGAGATTGATTTATATG+AGG + chr7_2:13893073-13893092 None:intergenic 20.0%
!!! GGATTTTATTAATTGTTTCA+TGG + chr7_2:13893452-13893471 None:intergenic 20.0%
!!! ACTTTATTTCTCTTTATTAG+TGG + chr7_2:13890152-13890171 None:intergenic 20.0%
!! ATCAAAAATATTGAGTTTCT+GGG + chr7_2:13890422-13890441 None:intergenic 20.0%
!! AATCAAAAATATTGAGTTTC+TGG + chr7_2:13890423-13890442 None:intergenic 20.0%
!!! CTATTTATTAGCCAATTTTA+AGG + chr7_2:13890696-13890715 None:intergenic 20.0%
!! CTTAAAATTGGCTAATAAAT+AGG - chr7_2:13890694-13890713 Msa1050050:CDS 20.0%
!! TTATTTAACAATTCTCCAAA+AGG + chr7_2:13890771-13890790 None:intergenic 20.0%
!!! TCTTTCATAAAAGCATATAA+TGG - chr7_2:13890796-13890815 Msa1050050:CDS 20.0%
!!! ATAAAAGCATATAATGGAAA+TGG - chr7_2:13890802-13890821 Msa1050050:CDS 20.0%
!!! AATTCCATAGTTTTAAAAAC+CGG - chr7_2:13894997-13895016 Msa1050050:intron 20.0%
!! AGTTTGTATAGATATTAAAC+CGG + chr7_2:13895599-13895618 None:intergenic 20.0%
!!! TTTAGGTGGTTTTTTTTTTT+TGG - chr7_2:13896125-13896144 Msa1050050:intron 20.0%
!! TTAATGCGATATGAATATTT+AGG - chr7_2:13896268-13896287 Msa1050050:intron 20.0%
!!! TTTTTTCTATGAGCTAATTA+AGG + chr7_2:13896325-13896344 None:intergenic 20.0%
!! AAATTAACTATGATGTGAAA+AGG - chr7_2:13897448-13897467 Msa1050050:intron 20.0%
!! AATTAACTATGATGTGAAAA+GGG - chr7_2:13897449-13897468 Msa1050050:intron 20.0%
!!! ACTTGTTGTATATTTAGATG+TGG - chr7_2:13890073-13890092 Msa1050050:CDS 25.0%
!!! TTGATTTGTGAAGATTTTGA+TGG + chr7_2:13890210-13890229 None:intergenic 25.0%
! AAATTTATCTCAGAGATATC+AGG - chr7_2:13890388-13890407 Msa1050050:CDS 25.0%
! TTGAAGCATAAAAAGTAAAG+AGG - chr7_2:13890493-13890512 Msa1050050:CDS 25.0%
! TGAAGCATAAAAAGTAAAGA+GGG - chr7_2:13890494-13890513 Msa1050050:CDS 25.0%
! GAACAATAATGCCTTAAAAT+TGG - chr7_2:13890682-13890701 Msa1050050:CDS 25.0%
!! ACATATATACAAGTTCCTTT+TGG - chr7_2:13890753-13890772 Msa1050050:CDS 25.0%
!! GTTTTTGCTCAATTTTATTG+TGG + chr7_2:13890832-13890851 None:intergenic 25.0%
!!! AAAACTTTTGAAATATGTGG+GGG + chr7_2:13890919-13890938 None:intergenic 25.0%
! ATATCCATTATCAAACACTA+TGG - chr7_2:13891348-13891367 Msa1050050:intron 25.0%
!! TTTTCCATAGTGTTTGATAA+TGG + chr7_2:13891355-13891374 None:intergenic 25.0%
! GTCAATATTTGTGAATTTAG+CGG + chr7_2:13891548-13891567 None:intergenic 25.0%
! AATGTGATCAATTTATTGTG+GGG + chr7_2:13892193-13892212 None:intergenic 25.0%
! CATCTTAAATTTGTGAAAAC+TGG + chr7_2:13892270-13892289 None:intergenic 25.0%
! ATAGTCTATACTCAAATTGT+AGG - chr7_2:13892422-13892441 Msa1050050:intron 25.0%
!! ATATGCAACTCTAAAAATGT+GGG + chr7_2:13892519-13892538 None:intergenic 25.0%
!! GATTTTGCATTACATAGTAT+AGG - chr7_2:13892651-13892670 Msa1050050:intron 25.0%
!!! ATGATCACTTTGAAACTTTA+TGG - chr7_2:13892694-13892713 Msa1050050:intron 25.0%
! AAGTTGTCATGATAAAGAAT+TGG + chr7_2:13892950-13892969 None:intergenic 25.0%
! ATATGAATACTTTGATATGC+TGG + chr7_2:13893032-13893051 None:intergenic 25.0%
! TGGAGGAACTTATAATAAAT+TGG + chr7_2:13893380-13893399 None:intergenic 25.0%
! CTAAATATACAACAATCTTG+AGG + chr7_2:13893473-13893492 None:intergenic 25.0%
! GATTGTTGTATATTTAGATG+TGG - chr7_2:13893476-13893495 Msa1050050:intron 25.0%
!!! TTGATTTGTGAAGATTTTGA+TGG + chr7_2:13890210-13890229 None:intergenic 25.0%
! AAATTTATCTCAGAGATATC+AGG - chr7_2:13890388-13890407 Msa1050050:CDS 25.0%
! TTGAAGCATAAAAAGTAAAG+AGG - chr7_2:13890493-13890512 Msa1050050:CDS 25.0%
! TGAAGCATAAAAAGTAAAGA+GGG - chr7_2:13890494-13890513 Msa1050050:CDS 25.0%
! GAACAATAATGCCTTAAAAT+TGG - chr7_2:13890682-13890701 Msa1050050:CDS 25.0%
!! ACATATATACAAGTTCCTTT+TGG - chr7_2:13890753-13890772 Msa1050050:CDS 25.0%
!! GTTTTTGCTCAATTTTATTG+TGG + chr7_2:13890832-13890851 None:intergenic 25.0%
! CATAGTTGTGTTGTAATTAT+TGG + chr7_2:13894305-13894324 None:intergenic 25.0%
! CAATAATTACAACACAACTA+TGG - chr7_2:13894303-13894322 Msa1050050:intron 25.0%
! TGAAACATAGAGAAAAAGAT+CGG + chr7_2:13894415-13894434 None:intergenic 25.0%
!! TAGATTTTACAAAACTACGA+TGG + chr7_2:13894445-13894464 None:intergenic 25.0%
! AGTCAATAAGTAGTTCAAAT+CGG - chr7_2:13894910-13894929 Msa1050050:intron 25.0%
! CGAATTCAAATGTTATTGAA+AGG - chr7_2:13895286-13895305 Msa1050050:intron 25.0%
! ATTTGACGCATTTAATACAA+GGG + chr7_2:13895788-13895807 None:intergenic 25.0%
! AATTTGACGCATTTAATACA+AGG + chr7_2:13895789-13895808 None:intergenic 25.0%
!! TTAAATGCGTCAAATTTTGA+CGG - chr7_2:13895793-13895812 Msa1050050:intron 25.0%
!! TTTAGAATTAGAGTTAGTCA+AGG + chr7_2:13895939-13895958 None:intergenic 25.0%
!!! AATAGTTTAGCTACTTTTCT+TGG + chr7_2:13895962-13895981 None:intergenic 25.0%
! AACTATTCTAAACCAAGAAA+AGG - chr7_2:13895975-13895994 Msa1050050:intron 25.0%
!!! TTTTTTTTTTGGTACAAGAG+AGG - chr7_2:13896136-13896155 Msa1050050:intron 25.0%
!!! TTTTTTTTTGGTACAAGAGA+GGG - chr7_2:13896137-13896156 Msa1050050:intron 25.0%
!!! ACTATTTTTGGAACTTGATA+TGG - chr7_2:13896355-13896374 Msa1050050:intron 25.0%
! AAATGTACATCACAGAAATT+AGG + chr7_2:13896425-13896444 None:intergenic 25.0%
! AACACATTTGAAGAATTAGA+AGG - chr7_2:13896880-13896899 Msa1050050:intron 25.0%
!! CATTTTCATGAGAAAGAAAA+CGG - chr7_2:13896976-13896995 Msa1050050:intron 25.0%
! CATAAAATGGTTGAGTAAAT+GGG - chr7_2:13897044-13897063 Msa1050050:intron 25.0%
!! TTAATATATAGTACTGAGCA+AGG + chr7_2:13897072-13897091 None:intergenic 25.0%
!!! ATAGTAAGTTACCGTTTTTA+TGG - chr7_2:13897154-13897173 Msa1050050:intron 25.0%
ATACAAGTAACTGGAATATG+AGG + chr7_2:13889987-13890006 None:intergenic 30.0%
TCAGCAATTATACAAGTAAC+TGG + chr7_2:13889996-13890015 None:intergenic 30.0%
GTTACTTGTATAATTGCTGA+TGG - chr7_2:13889996-13890015 Msa1050050:CDS 30.0%
GTAAAGGAACTTATCGAATT+TGG - chr7_2:13890170-13890189 Msa1050050:CDS 30.0%
GAAGCATAAAAAGTAAAGAG+GGG - chr7_2:13890495-13890514 Msa1050050:CDS 30.0%
!! GTGAGTCAAAATTGTTTTGT+AGG - chr7_2:13890637-13890656 Msa1050050:CDS 30.0%
!! TAAGTCTTATTAGTCTAGGA+CGG + chr7_2:13891020-13891039 None:intergenic 30.0%
!! GTGTTAAGTCTTATTAGTCT+AGG + chr7_2:13891024-13891043 None:intergenic 30.0%
TAACATACAACAAGTGTCTT+GGG + chr7_2:13891076-13891095 None:intergenic 30.0%
ACTAGAAAACGACAAGTAAT+GGG + chr7_2:13891474-13891493 None:intergenic 30.0%
TTGAGAGATATCATGTATTG+TGG + chr7_2:13891942-13891961 None:intergenic 30.0%
TAAGTTTCTTAACCCAAGTT+TGG - chr7_2:13892063-13892082 Msa1050050:intron 30.0%
TTATTATTGGCACCAAACTT+GGG + chr7_2:13892078-13892097 None:intergenic 30.0%
TTTATTATTGGCACCAAACT+TGG + chr7_2:13892079-13892098 None:intergenic 30.0%
! TATGCAACTCTAAAAATGTG+GGG + chr7_2:13892518-13892537 None:intergenic 30.0%
! GATATGCAACTCTAAAAATG+TGG + chr7_2:13892520-13892539 None:intergenic 30.0%
TGCATTACATAGTATAGGAT+AGG - chr7_2:13892656-13892675 Msa1050050:intron 30.0%
! GATGGTAGTTAATTTTCTCT+TGG + chr7_2:13892756-13892775 None:intergenic 30.0%
TAAATCATGGTCTACGTTAA+TGG - chr7_2:13893135-13893154 Msa1050050:intron 30.0%
AATGGAATGCACAAATTCAA+TGG - chr7_2:13893153-13893172 Msa1050050:intron 30.0%
ATTGATTATAATCCAGCACA+AGG + chr7_2:13893253-13893272 None:intergenic 30.0%
! ATAATCAATCGAAGGTTTTC+AGG - chr7_2:13893264-13893283 Msa1050050:intron 30.0%
GTAAAGGAACTTATCGAATT+TGG - chr7_2:13890170-13890189 Msa1050050:CDS 30.0%
GAAGCATAAAAAGTAAAGAG+GGG - chr7_2:13890495-13890514 Msa1050050:CDS 30.0%
!! GTGAGTCAAAATTGTTTTGT+AGG - chr7_2:13890637-13890656 Msa1050050:CDS 30.0%
! AGAGGAATTTTTCCATTCAA+AGG - chr7_2:13894380-13894399 Msa1050050:intron 30.0%
! CGGTTTAATTTACCTTTGAA+TGG + chr7_2:13894395-13894414 None:intergenic 30.0%
TAAGTAGTGAGCCAATAAAT+GGG - chr7_2:13894860-13894879 Msa1050050:intron 30.0%
!!! GGATTTTTTTGGAAAATCTG+TGG - chr7_2:13895168-13895187 Msa1050050:intron 30.0%
! TTGGCACTTAATTTTGTCAA+GGG + chr7_2:13895250-13895269 None:intergenic 30.0%
! ATTGGCACTTAATTTTGTCA+AGG + chr7_2:13895251-13895270 None:intergenic 30.0%
TTAAGTGCCAATTTACAACT+AGG - chr7_2:13895259-13895278 Msa1050050:intron 30.0%
! ATGACTAAACCGGTTTAAAT+CGG + chr7_2:13895655-13895674 None:intergenic 30.0%
!!! TGGTCCGATTTTTAAAACTA+TGG - chr7_2:13895745-13895764 Msa1050050:intron 30.0%
!! ATTAGTTTAGCTCCTTTTCT+TGG + chr7_2:13895990-13896009 None:intergenic 30.0%
ACAAAATTGTGTGAGATCAT+CGG - chr7_2:13896846-13896865 Msa1050050:intron 30.0%
ATGACTCAGAATGCATAAAA+TGG - chr7_2:13897031-13897050 Msa1050050:intron 30.0%
GCATAAAATGGTTGAGTAAA+TGG - chr7_2:13897043-13897062 Msa1050050:intron 30.0%
! ATCACTTGAAAGAATTTGCT+TGG - chr7_2:13897121-13897140 Msa1050050:intron 30.0%
! TCACTTGAAAGAATTTGCTT+GGG - chr7_2:13897122-13897141 Msa1050050:intron 30.0%
!! TACCGTTTTTATGGATAATG+AGG - chr7_2:13897163-13897182 Msa1050050:intron 30.0%
! AGATTTTCTAGATGAGGTTA+AGG - chr7_2:13897227-13897246 Msa1050050:intron 30.0%
ATAGAGGATACATAACTAGT+TGG - chr7_2:13897250-13897269 Msa1050050:intron 30.0%
TTATGCAACACTTGGAAAAT+AGG - chr7_2:13897420-13897439 Msa1050050:intron 30.0%
TATGCAACACTTGGAAAATA+GGG - chr7_2:13897421-13897440 Msa1050050:intron 30.0%
TTAATCACGAGCTCTTTGAA+AGG + chr7_2:13889948-13889967 None:intergenic 35.0%
!! TGAGTTACACGTTTTTGACT+TGG + chr7_2:13890609-13890628 None:intergenic 35.0%
TGGGGGATTGTTGTAATTAT+TGG + chr7_2:13890902-13890921 None:intergenic 35.0%
ACTTCGTAGATGTAATGCAT+CGG - chr7_2:13890971-13890990 Msa1050050:intron 35.0%
!! AAGTCTTATTAGTCTAGGAC+GGG + chr7_2:13891019-13891038 None:intergenic 35.0%
CTAACATACAACAAGTGTCT+TGG + chr7_2:13891077-13891096 None:intergenic 35.0%
!! AGACACTTGTTGTATGTTAG+AGG - chr7_2:13891077-13891096 Msa1050050:intron 35.0%
TGATTACCATAAGCCCTTAT+GGG + chr7_2:13891280-13891299 None:intergenic 35.0%
ATGATTACCATAAGCCCTTA+TGG + chr7_2:13891281-13891300 None:intergenic 35.0%
CACTAGAAAACGACAAGTAA+TGG + chr7_2:13891475-13891494 None:intergenic 35.0%
!!! CATTACTTGTCGTTTTCTAG+TGG - chr7_2:13891473-13891492 Msa1050050:intron 35.0%
TTTCCCTAAATTTCTTCCCA+AGG - chr7_2:13891506-13891525 Msa1050050:intron 35.0%
TTCCCTAAATTTCTTCCCAA+GGG - chr7_2:13891507-13891526 Msa1050050:intron 35.0%
!! ATTTATTTTCCCCAATGTGG+GGG + chr7_2:13891862-13891881 None:intergenic 35.0%
!! GATTTATTTTCCCCAATGTG+GGG + chr7_2:13891863-13891882 None:intergenic 35.0%
!! GGATTTATTTTCCCCAATGT+GGG + chr7_2:13891864-13891883 None:intergenic 35.0%
!! TGGATTTATTTTCCCCAATG+TGG + chr7_2:13891865-13891884 None:intergenic 35.0%
CTTCGCTTATGTCAATATCA+TGG + chr7_2:13892139-13892158 None:intergenic 35.0%
!!! CATTTTGAGGCCATATATGA+TGG + chr7_2:13892774-13892793 None:intergenic 35.0%
!! TGTCATGCTTAGTCATTTTG+AGG + chr7_2:13892787-13892806 None:intergenic 35.0%
! CCTTTTAAGCATGTTGAACA+TGG + chr7_2:13892846-13892865 None:intergenic 35.0%
CCATGTTCAACATGCTTAAA+AGG - chr7_2:13892843-13892862 Msa1050050:intron 35.0%
CAAGTTGCTATAGTACTAGT+TGG + chr7_2:13892981-13893000 None:intergenic 35.0%
GCATGCTGATAACTAAATCA+TGG - chr7_2:13893122-13893141 Msa1050050:intron 35.0%
! TATTGTTGTGTCACTCTACA+AGG + chr7_2:13893217-13893236 None:intergenic 35.0%
TCATCTATTTATCCTTGTGC+TGG - chr7_2:13893238-13893257 Msa1050050:intron 35.0%
GCTGGATTATAATCAATCGA+AGG - chr7_2:13893256-13893275 Msa1050050:intron 35.0%
!! AAGGTTTTCAGGACAGATTT+AGG - chr7_2:13893275-13893294 Msa1050050:intron 35.0%
!! AGGTTTTCAGGACAGATTTA+GGG - chr7_2:13893276-13893295 Msa1050050:intron 35.0%
AGGTGTAATTGCTCGAAATA+AGG + chr7_2:13893305-13893324 None:intergenic 35.0%
GTTTGTGTTAACTGAAACAG+AGG + chr7_2:13893325-13893344 None:intergenic 35.0%
!! TTTCATGGCTGTTGATGATA+GGG + chr7_2:13893437-13893456 None:intergenic 35.0%
!! TGAGTTACACGTTTTTGACT+TGG + chr7_2:13890609-13890628 None:intergenic 35.0%
GTAAGTAGTGAGCCAATAAA+TGG - chr7_2:13894859-13894878 Msa1050050:intron 35.0%
AGTTCAAATCGGATTCTTTG+TGG - chr7_2:13894921-13894940 Msa1050050:intron 35.0%
!!! CATAGTTTTAAAAACCGGCT+CGG - chr7_2:13895002-13895021 Msa1050050:intron 35.0%
!!! TTAATTTTGTCAAGGGTGCT+GGG + chr7_2:13895243-13895262 None:intergenic 35.0%
! TTTAAACCGGTTTAGTCATG+CGG - chr7_2:13895656-13895675 Msa1050050:intron 35.0%
! ACTACATTTTTGTTGGTCCT+TGG + chr7_2:13895855-13895874 None:intergenic 35.0%
AAGGACCAACAAAAATGTAG+TGG - chr7_2:13895854-13895873 Msa1050050:intron 35.0%
AGGACCAACAAAAATGTAGT+GGG - chr7_2:13895855-13895874 Msa1050050:intron 35.0%
ATGTTAGCAAACTTCTCCAT+CGG - chr7_2:13896008-13896027 Msa1050050:intron 35.0%
TAACGTTATGATTCATCCGA+TGG + chr7_2:13896027-13896046 None:intergenic 35.0%
TTAGCGATTAGAATATGCCT+CGG + chr7_2:13896089-13896108 None:intergenic 35.0%
ATGTGATATGTGCACTGTTT+AGG - chr7_2:13896108-13896127 Msa1050050:intron 35.0%
! GATGAAAATTTTGTTGCCGA+TGG - chr7_2:13896700-13896719 Msa1050050:intron 35.0%
CCAATCTAAACTTGTATCCA+AGG + chr7_2:13896728-13896747 None:intergenic 35.0%
CCTTGGATACAAGTTTAGAT+TGG - chr7_2:13896725-13896744 Msa1050050:intron 35.0%
ACAAGTTTAGATTGGATCTC+TGG - chr7_2:13896733-13896752 Msa1050050:intron 35.0%
TGATTCTAATGAAGCTTGGA+AGG + chr7_2:13896783-13896802 None:intergenic 35.0%
TCAGTGATTCTAATGAAGCT+TGG + chr7_2:13896787-13896806 None:intergenic 35.0%
! GATGATCTCACACAATTTTG+TGG + chr7_2:13896847-13896866 None:intergenic 35.0%
AGCCCTAACATATATAGCAT+TGG - chr7_2:13896931-13896950 Msa1050050:intron 35.0%
GGCCAATGCTATATATGTTA+GGG + chr7_2:13896936-13896955 None:intergenic 35.0%
! CACTTGAAAGAATTTGCTTG+GGG - chr7_2:13897123-13897142 Msa1050050:intron 35.0%
GGCCTCATTATCCATAAAAA+CGG + chr7_2:13897168-13897187 None:intergenic 35.0%
AATGAGGCCAGATATAGTAA+TGG - chr7_2:13897179-13897198 Msa1050050:intron 35.0%
ATGAGGCCAGATATAGTAAT+GGG - chr7_2:13897180-13897199 Msa1050050:intron 35.0%
TCTTCACCCATTACTATATC+TGG + chr7_2:13897189-13897208 None:intergenic 35.0%
ACCTCATCTAGAAAATCTTG+TGG + chr7_2:13897225-13897244 None:intergenic 35.0%
AATTCCAACCACAATGAGTT+AGG + chr7_2:13897320-13897339 None:intergenic 35.0%
ACACTTGAAGCAATTTCTTC+AGG - chr7_2:13897342-13897361 Msa1050050:intron 35.0%
AAGAAAGGCCAACAAATAGT+AGG + chr7_2:13897372-13897391 None:intergenic 35.0%
CTGAGCAACAAACAAATTGT+AGG - chr7_2:13897394-13897413 Msa1050050:intron 35.0%
GTAGGTATTTATGCAACACT+TGG - chr7_2:13897412-13897431 Msa1050050:intron 35.0%
!! AGAGATAACCAAACTTGTTG+TGG - chr7_2:13897473-13897492 Msa1050050:intron 35.0%
CATCATTTCCACAACAAGTT+TGG + chr7_2:13897484-13897503 None:intergenic 35.0%
!! CAAACTTGTTGTGGAAATGA+TGG - chr7_2:13897482-13897501 Msa1050050:intron 35.0%
! GAAATGATGGAAGGAGAAAA+AGG - chr7_2:13897495-13897514 Msa1050050:intron 35.0%
AGAGATGAGACAAAATTGCT+TGG - chr7_2:13897521-13897540 Msa1050050:CDS 35.0%
GATGGCAATTATGACTTTGC+TGG - chr7_2:13890014-13890033 Msa1050050:CDS 40.0%
TTATGACTTTGCTGGAAGAG+TGG - chr7_2:13890022-13890041 Msa1050050:CDS 40.0%
TATGACTTTGCTGGAAGAGT+GGG - chr7_2:13890023-13890042 Msa1050050:CDS 40.0%
!! AGATTTTGATGGAGCTGTGT+CGG + chr7_2:13890199-13890218 None:intergenic 40.0%
TCCCCGTTATGAATCATAAG+CGG - chr7_2:13890348-13890367 Msa1050050:CDS 40.0%
TCCGCTTATGATTCATAACG+GGG + chr7_2:13890352-13890371 None:intergenic 40.0%
CTCCGCTTATGATTCATAAC+GGG + chr7_2:13890353-13890372 None:intergenic 40.0%
CCTCCGCTTATGATTCATAA+CGG + chr7_2:13890354-13890373 None:intergenic 40.0%
TGTAGGCAAACTGTAACTGT+TGG - chr7_2:13890654-13890673 Msa1050050:CDS 40.0%
GTAGGCAAACTGTAACTGTT+GGG - chr7_2:13890655-13890674 Msa1050050:CDS 40.0%
GTAGATGTAATGCATCGGAA+CGG - chr7_2:13890976-13890995 Msa1050050:intron 40.0%
AGACTTAACACACAGTGAGT+TGG - chr7_2:13891033-13891052 Msa1050050:intron 40.0%
!! TGAGTTGGTTTAGCAAGCTA+TGG - chr7_2:13891048-13891067 Msa1050050:intron 40.0%
ACCTATATGAGTGTCAAGTG+GGG + chr7_2:13891223-13891242 None:intergenic 40.0%
CACCTATATGAGTGTCAAGT+GGG + chr7_2:13891224-13891243 None:intergenic 40.0%
TCACCTATATGAGTGTCAAG+TGG + chr7_2:13891225-13891244 None:intergenic 40.0%
TGATTGTAGCAGACACTAGA+TGG + chr7_2:13891250-13891269 None:intergenic 40.0%
TACCCATTGAACCTTCTTCA+TGG - chr7_2:13891423-13891442 Msa1050050:intron 40.0%
ACCCATTGAACCTTCTTCAT+GGG - chr7_2:13891424-13891443 Msa1050050:intron 40.0%
TCCCATGAAGAAGGTTCAAT+GGG + chr7_2:13891428-13891447 None:intergenic 40.0%
ATCCCATGAAGAAGGTTCAA+TGG + chr7_2:13891429-13891448 None:intergenic 40.0%
GATCTCCAATCACAAAGGTT+GGG - chr7_2:13891446-13891465 Msa1050050:intron 40.0%
TCCCTAAATTTCTTCCCAAG+GGG - chr7_2:13891508-13891527 Msa1050050:intron 40.0%
ACCCCTTGGGAAGAAATTTA+GGG + chr7_2:13891512-13891531 None:intergenic 40.0%
AACCCCTTGGGAAGAAATTT+AGG + chr7_2:13891513-13891532 None:intergenic 40.0%
!! TTCCCAAGGGGTTTTATACA+CGG - chr7_2:13891520-13891539 Msa1050050:intron 40.0%
ATCCGTGTATAAAACCCCTT+GGG + chr7_2:13891525-13891544 None:intergenic 40.0%
AAAATGTGGGGTCATACATG+CGG + chr7_2:13892506-13892525 None:intergenic 40.0%
GTAATAAGATGGGCACAGTT+TGG - chr7_2:13892590-13892609 Msa1050050:intron 40.0%
TATAGGACATCTGTGAATGG+AGG + chr7_2:13893397-13893416 None:intergenic 40.0%
TGCTATAGGACATCTGTGAA+TGG + chr7_2:13893400-13893419 None:intergenic 40.0%
!! GTTTCATGGCTGTTGATGAT+AGG + chr7_2:13893438-13893457 None:intergenic 40.0%
!! AGATTTTGATGGAGCTGTGT+CGG + chr7_2:13890199-13890218 None:intergenic 40.0%
TCCCCGTTATGAATCATAAG+CGG - chr7_2:13890348-13890367 Msa1050050:CDS 40.0%
TCCGCTTATGATTCATAACG+GGG + chr7_2:13890352-13890371 None:intergenic 40.0%
CTCCGCTTATGATTCATAAC+GGG + chr7_2:13890353-13890372 None:intergenic 40.0%
CCTCCGCTTATGATTCATAA+CGG + chr7_2:13890354-13890373 None:intergenic 40.0%
TGTAGGCAAACTGTAACTGT+TGG - chr7_2:13890654-13890673 Msa1050050:CDS 40.0%
GTAGGCAAACTGTAACTGTT+GGG - chr7_2:13890655-13890674 Msa1050050:CDS 40.0%
TATGGACAGCTTCTACTTGT+GGG - chr7_2:13894321-13894340 Msa1050050:intron 40.0%
TGTGGGATATTTGCAATTCG+AGG - chr7_2:13894346-13894365 Msa1050050:intron 40.0%
TGGCTCACTACTTACTAACA+GGG + chr7_2:13894854-13894873 None:intergenic 40.0%
TTGGCTCACTACTTACTAAC+AGG + chr7_2:13894855-13894874 None:intergenic 40.0%
CCAGTGTCTATCCCATTTAT+TGG + chr7_2:13894874-13894893 None:intergenic 40.0%
CCAATAAATGGGATAGACAC+TGG - chr7_2:13894871-13894890 Msa1050050:intron 40.0%
TTCATGGTCATTGAGTCACA+TGG - chr7_2:13894969-13894988 Msa1050050:intron 40.0%
!!! CGAGCCGGTTTTTAAAACTA+TGG + chr7_2:13895004-13895023 None:intergenic 40.0%
GTATGATCCAATAGCTGACT+CGG + chr7_2:13895075-13895094 None:intergenic 40.0%
!! CTTAATTTTGTCAAGGGTGC+TGG + chr7_2:13895244-13895263 None:intergenic 40.0%
! TCGCTAGCCTAGTTGTAAAT+TGG + chr7_2:13895269-13895288 None:intergenic 40.0%
!! GATGACTCGGTTGTAAAACT+CGG + chr7_2:13895633-13895652 None:intergenic 40.0%
!! ATTTTGACGGATGCCAATCA+TGG - chr7_2:13895806-13895825 Msa1050050:intron 40.0%
!! CAACAAAAATGTAGTGGGCA+CGG - chr7_2:13895860-13895879 Msa1050050:intron 40.0%
TCAGAGAGAGAGAGAAAGAT+TGG - chr7_2:13895895-13895914 Msa1050050:intron 40.0%
TGAAAATGACATTAGCACCG+AGG - chr7_2:13896069-13896088 Msa1050050:intron 40.0%
TGATATGTGCACTGTTTAGG+TGG - chr7_2:13896111-13896130 Msa1050050:intron 40.0%
ACGAAACTGGATTATGTGGA+CGG + chr7_2:13896394-13896413 None:intergenic 40.0%
ACAGACGAAACTGGATTATG+TGG + chr7_2:13896398-13896417 None:intergenic 40.0%
TTAGGTCTAACAGACGAAAC+TGG + chr7_2:13896407-13896426 None:intergenic 40.0%
TCTACAATCGATCATGTGTG+TGG + chr7_2:13896601-13896620 None:intergenic 40.0%
!! TTTAGCCCTAAGAGTGTCAA+GGG + chr7_2:13896911-13896930 None:intergenic 40.0%
!!! TTTTAGCCCTAAGAGTGTCA+AGG + chr7_2:13896912-13896931 None:intergenic 40.0%
GGGCCAATGCTATATATGTT+AGG + chr7_2:13896937-13896956 None:intergenic 40.0%
!! CAGCAAGTGGTTCAAGTTTT+TGG - chr7_2:13897004-13897023 Msa1050050:intron 40.0%
! GCCACAAGATTTTCTAGATG+AGG - chr7_2:13897221-13897240 Msa1050050:intron 40.0%
CTAGATGAGGTTAAGGATAG+AGG - chr7_2:13897234-13897253 Msa1050050:intron 40.0%
! GTTTGTTGCTCAGCAAAGAA+AGG + chr7_2:13897387-13897406 None:intergenic 40.0%
CAACACTTGGAAAATAGGGA+TGG - chr7_2:13897425-13897444 Msa1050050:intron 40.0%
! CTTGTTGTGGAAATGATGGA+AGG - chr7_2:13897486-13897505 Msa1050050:intron 40.0%
TGAGACAAAATTGCTTGGAG+TGG - chr7_2:13897526-13897545 Msa1050050:CDS 40.0%
AGCTACAGATGCTACTAATG+TGG - chr7_2:13897557-13897576 Msa1050050:CDS 40.0%
GCTACAGATGCTACTAATGT+GGG - chr7_2:13897558-13897577 Msa1050050:CDS 40.0%
TGGAAGAGTGGGTAAGGATT+TGG - chr7_2:13890034-13890053 Msa1050050:CDS 45.0%
GGAAGAGTGGGTAAGGATTT+GGG - chr7_2:13890035-13890054 Msa1050050:CDS 45.0%
!!! GGAAGAGTGTGTTGTTTTGC+AGG + chr7_2:13890244-13890263 None:intergenic 45.0%
TGACATAGTCACTGTCCTTG+AGG - chr7_2:13890277-13890296 Msa1050050:CDS 45.0%
TGAGGCGGATAAAATCCTCA+AGG + chr7_2:13890295-13890314 None:intergenic 45.0%
AAGAACTGTTGTATCCTGGG+AGG + chr7_2:13890329-13890348 None:intergenic 45.0%
GGGAAGAACTGTTGTATCCT+GGG + chr7_2:13890332-13890351 None:intergenic 45.0%
CCGTTATGAATCATAAGCGG+AGG - chr7_2:13890351-13890370 Msa1050050:CDS 45.0%
CGTAACAGCAAGAATTGTGG+GGG + chr7_2:13891121-13891140 None:intergenic 45.0%
GCGTAACAGCAAGAATTGTG+GGG + chr7_2:13891122-13891141 None:intergenic 45.0%
CGCGTAACAGCAAGAATTGT+GGG + chr7_2:13891123-13891142 None:intergenic 45.0%
!! CCACAATTCTTGCTGTTACG+CGG - chr7_2:13891121-13891140 Msa1050050:intron 45.0%
! CTAGAGCACTCATGAATACC+AGG + chr7_2:13891173-13891192 None:intergenic 45.0%
ACAATCAAACACCGCCCATA+AGG - chr7_2:13891263-13891282 Msa1050050:intron 45.0%
CAATCAAACACCGCCCATAA+GGG - chr7_2:13891264-13891283 Msa1050050:intron 45.0%
TTACCATAAGCCCTTATGGG+CGG + chr7_2:13891277-13891296 None:intergenic 45.0%
GATTGGAGATCCCATGAAGA+AGG + chr7_2:13891437-13891456 None:intergenic 45.0%
CATGGGATCTCCAATCACAA+AGG - chr7_2:13891441-13891460 Msa1050050:intron 45.0%
GGATCTCCAATCACAAAGGT+TGG - chr7_2:13891445-13891464 Msa1050050:intron 45.0%
GATCCGTGTATAAAACCCCT+TGG + chr7_2:13891526-13891545 None:intergenic 45.0%
TAAGCAACAAACCCCCACAT+TGG - chr7_2:13891848-13891867 Msa1050050:intron 45.0%
AAGCAACAAACCCCCACATT+GGG - chr7_2:13891849-13891868 Msa1050050:intron 45.0%
AGATGTCCTATAGCAGCTTG+CGG - chr7_2:13893405-13893424 Msa1050050:intron 45.0%
!!! GGAAGAGTGTGTTGTTTTGC+AGG + chr7_2:13890244-13890263 None:intergenic 45.0%
TGACATAGTCACTGTCCTTG+AGG - chr7_2:13890277-13890296 Msa1050050:CDS 45.0%
TGAGGCGGATAAAATCCTCA+AGG + chr7_2:13890295-13890314 None:intergenic 45.0%
AAGAACTGTTGTATCCTGGG+AGG + chr7_2:13890329-13890348 None:intergenic 45.0%
GGGAAGAACTGTTGTATCCT+GGG + chr7_2:13890332-13890351 None:intergenic 45.0%
CCGTTATGAATCATAAGCGG+AGG - chr7_2:13890351-13890370 Msa1050050:CDS 45.0%
CTATGGACAGCTTCTACTTG+TGG - chr7_2:13894320-13894339 Msa1050050:intron 45.0%
AGCTTCTACTTGTGGGTTTG+TGG - chr7_2:13894328-13894347 Msa1050050:intron 45.0%
GCTTCTACTTGTGGGTTTGT+GGG - chr7_2:13894329-13894348 Msa1050050:intron 45.0%
ACTACTTACTAACAGGGGTG+TGG + chr7_2:13894848-13894867 None:intergenic 45.0%
GGCTCACTACTTACTAACAG+GGG + chr7_2:13894853-13894872 None:intergenic 45.0%
!!! TTTTAAAAACCGGCTCGGAC+CGG - chr7_2:13895007-13895026 Msa1050050:intron 45.0%
!! TTCTGTACCGGTTCAACAAC+CGG + chr7_2:13895128-13895147 None:intergenic 45.0%
GTTGAACCGGTACAGAAAAC+CGG - chr7_2:13895131-13895150 Msa1050050:intron 45.0%
TTGAACCGGTACAGAAAACC+GGG - chr7_2:13895132-13895151 Msa1050050:intron 45.0%
! TTTGACCCGGTTTTCTGTAC+CGG + chr7_2:13895140-13895159 None:intergenic 45.0%
!!! AAAGGCTGCGCGGATTTTTT+TGG - chr7_2:13895157-13895176 Msa1050050:intron 45.0%
TTAATGGCTCATCCACATCC+AGG - chr7_2:13895210-13895229 Msa1050050:intron 45.0%
GGGATATAGATCGAGTCTTC+TGG - chr7_2:13895567-13895586 Msa1050050:intron 45.0%
!! TCGAGTCTTCTGGTTCAATC+CGG - chr7_2:13895577-13895596 Msa1050050:intron 45.0%
CCGGTTTAAATCGGATGACT+CGG + chr7_2:13895646-13895665 None:intergenic 45.0%
CCGAGTCATCCGATTTAAAC+CGG - chr7_2:13895643-13895662 Msa1050050:intron 45.0%
GTTGAACCGCATGACTAAAC+CGG + chr7_2:13895665-13895684 None:intergenic 45.0%
TGGTTGAACCATTGAGTCAC+TGG + chr7_2:13895687-13895706 None:intergenic 45.0%
GCAAGTGACAACTGTGTCTA+GGG + chr7_2:13895833-13895852 None:intergenic 45.0%
! CGTGCCCACTACATTTTTGT+TGG + chr7_2:13895862-13895881 None:intergenic 45.0%
ATTTGCATACACTGTCAGCG+TGG - chr7_2:13896497-13896516 Msa1050050:intron 45.0%
! ACTTGTATCCAAGGTGCCAT+CGG + chr7_2:13896719-13896738 None:intergenic 45.0%
TGAAGCCCTTGACACTCTTA+GGG - chr7_2:13896903-13896922 Msa1050050:intron 45.0%
! GAAAACGGTTTTGCAGCAAG+TGG - chr7_2:13896991-13897010 Msa1050050:intron 45.0%
! CTGATGGATGAGCAAGAACT+TGG + chr7_2:13897287-13897306 None:intergenic 45.0%
GTTCTTGCTCATCCATCAGT+TGG - chr7_2:13897288-13897307 Msa1050050:intron 45.0%
TTGCTCATCCATCAGTTGGA+GGG - chr7_2:13897292-13897311 Msa1050050:intron 45.0%
GGTTCCTAACTCATTGTGGT+TGG - chr7_2:13897313-13897332 Msa1050050:intron 45.0%
CAGGTCTGCCTACTATTTGT+TGG - chr7_2:13897361-13897380 Msa1050050:intron 45.0%
ACAGATGCTACTAATGTGGG+AGG - chr7_2:13897561-13897580 Msa1050050:CDS 45.0%
!!! AAAATATATATTACTATTTT+TGG - chr7_2:13896343-13896362 Msa1050050:intron 5.0%
CTTTGCTGGAAGAGTGGGTA+AGG - chr7_2:13890028-13890047 Msa1050050:CDS 50.0%
ACACACTCTTCCGTAACCTG+AGG - chr7_2:13890252-13890271 Msa1050050:CDS 50.0%
CTATGTCACGCCTCAGGTTA+CGG + chr7_2:13890265-13890284 None:intergenic 50.0%
GAGGATATGCGCTTATGAGG+CGG + chr7_2:13890310-13890329 None:intergenic 50.0%
TGGGAGGATATGCGCTTATG+AGG + chr7_2:13890313-13890332 None:intergenic 50.0%
TCATAAGCGCATATCCTCCC+AGG - chr7_2:13890312-13890331 Msa1050050:CDS 50.0%
GGGGAAGAACTGTTGTATCC+TGG + chr7_2:13890333-13890352 None:intergenic 50.0%
CGGAACGGTATAGCAAGCTA+TGG - chr7_2:13890991-13891010 Msa1050050:intron 50.0%
CCGCGTAACAGCAAGAATTG+TGG + chr7_2:13891124-13891143 None:intergenic 50.0%
TTACGCGGTTGTGCGCTAAT+AGG - chr7_2:13891136-13891155 Msa1050050:intron 50.0%
GCCCCACTTGACACTCATAT+AGG - chr7_2:13891219-13891238 Msa1050050:intron 50.0%
GGGAACCCAACCTTTGTGAT+TGG + chr7_2:13891454-13891473 None:intergenic 50.0%
AGCAACAAACCCCCACATTG+GGG - chr7_2:13891850-13891869 Msa1050050:intron 50.0%
TTTGCACCGCAAGCTGCTAT+AGG + chr7_2:13893414-13893433 None:intergenic 50.0%
ACACACTCTTCCGTAACCTG+AGG - chr7_2:13890252-13890271 Msa1050050:CDS 50.0%
CTATGTCACGCCTCAGGTTA+CGG + chr7_2:13890265-13890284 None:intergenic 50.0%
GAGGATATGCGCTTATGAGG+CGG + chr7_2:13890310-13890329 None:intergenic 50.0%
TGGGAGGATATGCGCTTATG+AGG + chr7_2:13890313-13890332 None:intergenic 50.0%
TCATAAGCGCATATCCTCCC+AGG - chr7_2:13890312-13890331 Msa1050050:CDS 50.0%
GGGGAAGAACTGTTGTATCC+TGG + chr7_2:13890333-13890352 None:intergenic 50.0%
TTCGAGGAGCTTGTCAACAG+AGG - chr7_2:13894362-13894381 Msa1050050:intron 50.0%
ATGGGATAGACACTGGAGCT+AGG - chr7_2:13894878-13894897 Msa1050050:intron 50.0%
!! ATCCAATAGCTGACTCGGAC+CGG + chr7_2:13895070-13895089 None:intergenic 50.0%
CATCGAACCGGTTGTTGAAC+CGG - chr7_2:13895118-13895137 Msa1050050:intron 50.0%
GGTACAGAAAACCGGGTCAA+AGG - chr7_2:13895139-13895158 Msa1050050:intron 50.0%
CGGTTCAACCAGTGACTCAA+TGG - chr7_2:13895676-13895695 Msa1050050:intron 50.0%
! AATCGGACCAGTCATCGACT+CGG + chr7_2:13895735-13895754 None:intergenic 50.0%
! CTGTGTCTAGGGTCCATGAT+TGG + chr7_2:13895822-13895841 None:intergenic 50.0%
GGCAAGTGACAACTGTGTCT+AGG + chr7_2:13895834-13895853 None:intergenic 50.0%
! GACACAGTTGTCACTTGCCA+AGG - chr7_2:13895835-13895854 Msa1050050:intron 50.0%
! TTTTGTTGCCGATGGCACCT+TGG - chr7_2:13896708-13896727 Msa1050050:intron 50.0%
GTGAAGCCCTTGACACTCTT+AGG - chr7_2:13896902-13896921 Msa1050050:intron 50.0%
ATTGGCCCACTTCACATGCT+TGG - chr7_2:13896949-13896968 Msa1050050:intron 50.0%
GCCTACCAAGCATGTGAAGT+GGG + chr7_2:13896957-13896976 None:intergenic 50.0%
TGCCTACCAAGCATGTGAAG+TGG + chr7_2:13896958-13896977 None:intergenic 50.0%
CTTGCTCATCCATCAGTTGG+AGG - chr7_2:13897291-13897310 Msa1050050:intron 50.0%
GTTAGGAACCCTCCAACTGA+TGG + chr7_2:13897303-13897322 None:intergenic 50.0%
GGAGGGTTCCTAACTCATTG+TGG - chr7_2:13897309-13897328 Msa1050050:intron 50.0%
CAGTGACTATGTCACGCCTC+AGG + chr7_2:13890271-13890290 None:intergenic 55.0%
ATGAATACCAGGCACGCGCA+CGG + chr7_2:13891162-13891181 None:intergenic 55.0%
!! AGTGCTCTAGAGACCTGCCA+CGG - chr7_2:13891183-13891202 Msa1050050:intron 55.0%
ACACCGCCCATAAGGGCTTA+TGG - chr7_2:13891271-13891290 Msa1050050:intron 55.0%
CAGTGACTATGTCACGCCTC+AGG + chr7_2:13890271-13890290 None:intergenic 55.0%
CACGGTTCAACCGGTTGAAC+CGG + chr7_2:13895033-13895052 None:intergenic 55.0%
CAACCGGTTGAACCGTGAAC+CGG - chr7_2:13895036-13895055 Msa1050050:intron 55.0%
!! CAACAACCGGTTCGATGACG+TGG + chr7_2:13895115-13895134 None:intergenic 55.0%
CTGGGTTCGATTCCTGGATG+TGG + chr7_2:13895225-13895244 None:intergenic 55.0%
TCATTGGGTCACTGGGTCAG+TGG + chr7_2:13895707-13895726 None:intergenic 55.0%
!! ATCGACTCGGCAGGGTCATT+GGG + chr7_2:13895722-13895741 None:intergenic 55.0%
GCCCACTTCACATGCTTGGT+AGG - chr7_2:13896953-13896972 Msa1050050:intron 55.0%
CTGCCACGGTCTCATGCAAG+CGG - chr7_2:13891197-13891216 Msa1050050:intron 60.0%
GTTCAACCGGTTGAACCGGC+CGG + chr7_2:13895029-13895048 None:intergenic 60.0%
GGTCCGGTTCACGGTTCAAC+CGG + chr7_2:13895042-13895061 None:intergenic 60.0%
!! AGCTGACTCGGACCGGTCAA+GGG + chr7_2:13895063-13895082 None:intergenic 60.0%
!! TAGCTGACTCGGACCGGTCA+AGG + chr7_2:13895064-13895083 None:intergenic 60.0%
GACCGGTCCGAGTCAGCTAT+TGG - chr7_2:13895065-13895084 Msa1050050:intron 60.0%
TCGCTGCCACGTCATCGAAC+CGG - chr7_2:13895106-13895125 Msa1050050:intron 60.0%
AAACCGGGTCAAAGGCTGCG+CGG - chr7_2:13895147-13895166 Msa1050050:intron 60.0%
AATCCGCGCAGCCTTTGACC+CGG + chr7_2:13895153-13895172 None:intergenic 60.0%
!! AGGGTGCTGGGTTCGATTCC+TGG + chr7_2:13895231-13895250 None:intergenic 60.0%
GGCAGGGTCATTGGGTCACT+GGG + chr7_2:13895714-13895733 None:intergenic 60.0%
!! CATCGACTCGGCAGGGTCAT+TGG + chr7_2:13895723-13895742 None:intergenic 60.0%
!! GACCAGTCATCGACTCGGCA+GGG + chr7_2:13895730-13895749 None:intergenic 60.0%
GTCAAGGCACGCTAGTAGCG+TGG + chr7_2:13895923-13895942 None:intergenic 60.0%
TAATAGGCCGTGCGCGTGCC+TGG - chr7_2:13891152-13891171 Msa1050050:intron 65.0%
CGCTTGCATGAGACCGTGGC+AGG + chr7_2:13891199-13891218 None:intergenic 65.0%
!! AAAAACCGGCTCGGACCGGC+CGG - chr7_2:13895011-13895030 Msa1050050:intron 65.0%
CCGGTCAAGGGTCCGGTTCA+CGG + chr7_2:13895051-13895070 None:intergenic 65.0%
CCGTGAACCGGACCCTTGAC+CGG - chr7_2:13895048-13895067 Msa1050050:intron 65.0%
ACTCGGACCGGTCAAGGGTC+CGG + chr7_2:13895058-13895077 None:intergenic 65.0%
CGGCAGGGTCATTGGGTCAC+TGG + chr7_2:13895715-13895734 None:intergenic 65.0%
GACCCTGCCGAGTCGATGAC+TGG - chr7_2:13895725-13895744 Msa1050050:intron 65.0%
!! GGACCAGTCATCGACTCGGC+AGG + chr7_2:13895731-13895750 None:intergenic 65.0%
GGGCCGCTTGCATGAGACCG+TGG + chr7_2:13891203-13891222 None:intergenic 70.0%
TTGAACCGGCCGGTCCGAGC+CGG + chr7_2:13895019-13895038 None:intergenic 70.0%
! CTCGGACCGGCCGGTTCAAC+CGG - chr7_2:13895020-13895039 Msa1050050:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 13889909 13897644 13889909 ID=Msa1050050;Name=Msa1050050
chr7_2 mRNA 13889909 13897644 13889909 ID=Msa1050050-mRNA-1;Parent=Msa1050050;Name=Msa1050050-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0|0|1|1|1|2|0|359
chr7_2 exon 13897509 13897644 13897509 ID=Msa1050050-mRNA-1:exon:3430;Parent=Msa1050050-mRNA-1
chr7_2 exon 13889909 13890852 13889909 ID=Msa1050050-mRNA-1:exon:3429;Parent=Msa1050050-mRNA-1
chr7_2 CDS 13897509 13897644 13897509 ID=Msa1050050-mRNA-1:cds;Parent=Msa1050050-mRNA-1
chr7_2 CDS 13889909 13890852 13889909 ID=Msa1050050-mRNA-1:cds;Parent=Msa1050050-mRNA-1
Gene Sequence

>Msa1050050

ATGTTGTGTGATTCAACTAGGAAAAATTGTTATGCTCCTTTCAAAGAGCTCGTGATTAAGCTCAACACTTCATCACCTCATATTCCAGTTACTTGTATAATTGCTGATGGCAATTATGACTTTGCTGGAAGAGTGGATGAAAATTTTGTTGCCGATGGCACCTTGGATACAAGTTTAGATTGGATCTCTGGAATAAAAGATATCAGATTGAAAGACCTTCCAAGCTTCATTAGAATCACTGATCTAAATGATATTATGTTTGATTTCTTTTGTGTTAAGCCACAAAATTGTGTGAGATCATCGGCAATCATCATTAACACATTTGAAGAATTAGAAGGTGAAGCCCTTGACACTCTTAGGGCTAAAAGCCCTAACATATATAGCATTGGCCCACTTCACATGCTTGGTAGGCATTTTCATGAGAAAGAAAACGGTTTTGCAGCAAGTGGTTCAAGTTTTTGGAAAAATGACTCAGAATGCATAAAATGGTTGAGTAAATGGGAACCTTGCTCAGTACTATATATTAATTATGGAAGTATAACTGTTATGACAGATCATCACTTGAAAGAATTTGCTTGGGGATTAGCAAATAGTAAGTTACCGTTTTTATGGATAATGAGGCCAGATATAGTAATGGGTGAAGAAACTTCAACTTTGCCACAAGATTTTCTAGATGAGGTTAAGGATAGAGGATACATAACTAGTTGGTGCATGCAAGACCAAGTTCTTGCTCATCCATCAGTTGGAGGGTTCCTAACTCATTGTGGTTGGAATTCTACACTTGAAGCAATTTCTTCAGGTCTGCCTACTATTTGTTGGCCTTTCTTTGCTGAGCAACAAACAAATTGTAGGTATTTATGCAACACTTGGAAAATAGGGATGGAAATTAACTATGATGTGAAAAGGGAAGAGATAACCAAACTTGTTGTGGAAATGATGGAAGGAGAAAAAGGAAAAGAGATGAGACAAAATTGCTTGGAGTGGAAGAAGAAAGCTACAGATGCTACTAATGTGGGAGGATCATCATACAATAATTTCTATAATTTAATTAAAGAGCTTCTTCATCACAATGCTATTTGA
Protein sequence

>Msa1050050

MLCDSTRKNCYAPFKELVIKLNTSSPHIPVTCIIADGNYDFAGRVDENFVADGTLDTSLDWISGIKDIRLKDLPSFIRITDLNDIMFDFFCVKPQNCVRSSAIIINTFEELEGEALDTLRAKSPNIYSIGPLHMLGRHFHEKENGFAASGSSFWKNDSECIKWLSKWEPCSVLYINYGSITVMTDHHLKEFAWGLANSKLPFLWIMRPDIVMGEETSTLPQDFLDEVKDRGYITSWCMQDQVLAHPSVGGFLTHCGWNSTLEAISSGLPTICWPFFAEQQTNCRYLCNTWKIGMEINYDVKREEITKLVVEMMEGEKGKEMRQNCLEWKKKATDATNVGGSSYNNFYNLIKELLHHNAI*