AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0371610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0371610 MtrunA17_Chr3g0118771 89.308 477 51 0 3 479 18 494 0.0 897
Msa0371610 MtrunA17_Chr3g0118711 85.084 476 71 0 3 478 10 485 0.0 863
Msa0371610 MtrunA17_Chr3g0118691 81.420 479 89 0 1 479 10 488 0.0 838
Msa0371610 MtrunA17_Chr3g0118671 80.962 478 91 0 1 478 1 478 0.0 833
Msa0371610 MtrunA17_Chr3g0118701 79.123 479 100 0 1 479 10 488 0.0 823
Msa0371610 MtrunA17_Chr3g0118751 81.002 479 62 2 1 479 1 450 0.0 796
Msa0371610 MtrunA17_Chr3g0118661 64.151 477 170 1 3 479 10 485 0.0 630
Msa0371610 MtrunA17_Chr3g0118721 91.864 295 24 0 185 479 1 295 0.0 574
Msa0371610 MtrunA17_Chr5g0426431 53.503 471 213 5 6 474 12 478 0.0 531
Msa0371610 MtrunA17_Chr3g0092641 52.754 472 217 5 5 474 11 478 0.0 521
Msa0371610 MtrunA17_Chr3g0078841 51.158 475 228 3 2 474 6 478 0.0 516
Msa0371610 MtrunA17_Chr6g0454341 50.105 475 233 3 2 474 6 478 8.56e-178 507
Msa0371610 MtrunA17_Chr6g0454331 50.833 480 226 4 2 474 3 479 7.42e-175 500
Msa0371610 MtrunA17_Chr6g0454191 50.000 478 230 5 3 474 7 481 1.34e-174 499
Msa0371610 MtrunA17_Chr6g0454321 48.967 484 240 4 2 483 6 484 1.51e-172 500
Msa0371610 MtrunA17_Chr6g0454321 46.667 135 67 2 3 132 501 635 5.25e-29 120
Msa0371610 MtrunA17_Chr6g0454301 50.737 475 230 3 2 474 259 731 3.54e-172 502
Msa0371610 MtrunA17_Chr6g0454301 54.585 229 101 2 244 472 3 228 7.37e-84 273
Msa0371610 MtrunA17_Chr4g0050341 49.895 475 232 4 4 473 17 490 6.19e-172 493
Msa0371610 MtrunA17_Chr6g0454401 50.104 479 230 4 2 474 6 481 2.19e-171 491
Msa0371610 MtrunA17_Chr8g0336331 49.895 475 233 4 2 474 6 477 7.96e-171 489
Msa0371610 MtrunA17_Chr6g0454181 48.428 477 238 4 3 474 7 480 7.97e-170 487
Msa0371610 MtrunA17_Chr6g0454201 51.891 476 221 5 4 474 9 481 1.16e-169 487
Msa0371610 MtrunA17_Chr6g0453951 49.896 479 230 5 2 474 53 527 2.10e-168 485
Msa0371610 MtrunA17_Chr2g0278711 49.474 475 232 5 3 474 8 477 5.21e-168 482
Msa0371610 MtrunA17_Chr6g0453961 49.476 477 232 5 4 474 17 490 1.19e-166 479
Msa0371610 MtrunA17_Chr6g0454211 51.148 479 224 5 2 474 293 767 3.01e-166 488
Msa0371610 MtrunA17_Chr6g0454211 34.857 350 143 4 124 473 3 267 4.41e-59 207
Msa0371610 MtrunA17_Chr6g0454361 50.420 476 228 4 4 474 9 481 1.68e-165 476
Msa0371610 MtrunA17_Chr8g0359821 48.109 476 241 3 2 474 6 478 1.88e-165 476
Msa0371610 MtrunA17_Chr6g0454291 49.791 478 232 4 2 474 3 477 5.17e-164 472
Msa0371610 MtrunA17_Chr6g0454351 48.643 479 219 6 2 474 8 465 1.26e-162 468
Msa0371610 MtrunA17_Chr6g0454261 47.699 478 242 4 2 474 6 480 8.66e-159 459
Msa0371610 MtrunA17_Chr6g0454151 47.817 481 241 5 2 477 6 481 1.60e-156 453
Msa0371610 MtrunA17_Chr6g0454141 45.188 478 254 4 2 474 6 480 2.57e-155 450
Msa0371610 MtrunA17_Chr6g0454121 47.158 475 244 4 4 474 8 479 3.31e-154 447
Msa0371610 MtrunA17_Chr6g0452771 47.799 477 241 4 3 474 7 480 1.04e-153 446
Msa0371610 MtrunA17_Chr6g0454131 46.737 475 246 4 4 474 8 479 1.31e-153 446
Msa0371610 MtrunA17_Chr7g0217881 46.875 480 227 6 1 474 5 462 1.02e-150 437
Msa0371610 MtrunA17_Chr5g0423981 46.751 477 209 7 4 474 8 445 1.97e-146 426
Msa0371610 MtrunA17_Chr6g0454251 46.717 396 203 4 2 392 3 395 1.33e-131 386
Msa0371610 MtrunA17_Chr5g0426401 51.282 312 145 5 166 474 4 311 1.03e-111 333
Msa0371610 MtrunA17_Chr6g0454271 53.103 290 133 2 185 474 1 287 2.12e-106 318
Msa0371610 MtrunA17_Chr8g0355011 41.873 363 166 2 112 474 45 362 4.57e-100 305
Msa0371610 MtrunA17_Chr6g0454221 56.303 238 102 2 244 481 3 238 1.12e-92 283
Msa0371610 MtrunA17_Chr5g0412131 35.368 475 281 11 5 471 11 467 9.09e-92 287
Msa0371610 MtrunA17_Chr3g0112771 34.958 472 271 11 7 474 13 452 2.85e-89 280
Msa0371610 MtrunA17_Chr6g0454171 41.667 336 145 5 143 474 22 310 7.22e-89 274
Msa0371610 MtrunA17_Chr5g0412111 33.543 477 290 11 3 471 2 459 5.27e-87 274
Msa0371610 MtrunA17_Chr5g0412101 34.316 475 287 10 5 471 11 468 3.67e-86 272
Msa0371610 MtrunA17_Chr3g0112761 36.211 475 265 13 6 474 8 450 9.50e-86 271
Msa0371610 MtrunA17_Chr4g0032331 34.504 484 273 12 4 478 6 454 4.14e-78 251
Msa0371610 MtrunA17_Chr5g0414331 32.091 483 279 11 6 477 13 457 3.24e-74 241
Msa0371610 MtrunA17_Chr5g0414321 31.352 488 276 11 6 477 11 455 8.15e-73 237
Msa0371610 MtrunA17_Chr7g0250001 30.271 479 300 9 1 475 1 449 6.50e-72 235
Msa0371610 MtrunA17_Chr7g0249981 31.006 487 288 12 4 479 23 472 5.76e-71 233
Msa0371610 MtrunA17_Chr3g0098111 28.747 487 318 10 6 481 9 477 9.31e-70 230
Msa0371610 MtrunA17_Chr8g0365811 31.799 478 277 15 7 462 496 946 5.52e-68 234
Msa0371610 MtrunA17_Chr8g0365811 29.718 461 287 13 6 448 9 450 7.67e-58 206
Msa0371610 MtrunA17_Chr7g0218791 32.158 482 274 15 5 472 4 446 8.35e-68 224
Msa0371610 MtrunA17_Chr7g0218811 30.932 472 281 15 5 470 14 446 3.50e-67 222
Msa0371610 MtrunA17_Chr6g0464881 30.328 488 286 12 2 474 7 455 5.99e-67 222
Msa0371610 MtrunA17_Chr1g0207861 30.417 480 303 11 6 473 8 468 9.97e-67 222
Msa0371610 MtrunA17_Chr6g0464921 29.769 477 296 10 5 473 10 455 1.05e-66 221
Msa0371610 MtrunA17_Chr7g0218831 31.423 471 279 13 5 470 5 436 3.48e-66 219
Msa0371610 MtrunA17_Chr8g0336271 44.583 240 130 2 2 239 6 244 5.09e-66 214
Msa0371610 MtrunA17_Chr1g0161351 30.000 480 305 10 6 473 37 497 8.57e-66 220
Msa0371610 MtrunA17_Chr7g0218841 31.635 471 279 15 5 470 5 437 9.23e-66 218
Msa0371610 MtrunA17_Chr1g0207971 29.436 479 300 11 6 476 8 456 1.32e-65 218
Msa0371610 MtrunA17_Chr1g0207981 30.290 482 302 10 6 474 13 473 3.76e-65 218
Msa0371610 MtrunA17_Chr7g0218821 30.608 477 287 15 5 470 4 447 6.31e-65 216
Msa0371610 MtrunA17_Chr6g0454371 54.651 172 77 1 303 474 1 171 3.56e-64 205
Msa0371610 MtrunA17_Chr6g0464871 31.056 483 285 13 6 476 23 469 3.68e-64 215
Msa0371610 MtrunA17_Chr3g0118731 90.741 108 10 0 58 165 28 135 4.24e-64 205
Msa0371610 MtrunA17_Chr6g0464841 30.228 483 283 13 6 473 11 454 4.77e-63 211
Msa0371610 MtrunA17_Chr4g0044511 29.735 491 304 10 2 473 36 504 5.21e-63 213
Msa0371610 MtrunA17_Chr6g0454231 44.828 232 126 1 2 231 246 477 1.44e-61 208
Msa0371610 MtrunA17_Chr6g0454231 42.188 256 106 4 220 474 5 219 8.65e-59 201
Msa0371610 MtrunA17_Chr6g0464861 30.864 486 283 13 2 473 7 453 3.45e-61 207
Msa0371610 MtrunA17_Chr1g0207951 30.000 480 297 12 6 476 124 573 5.72e-61 216
Msa0371610 MtrunA17_Chr1g0207951 28.571 490 305 12 6 480 656 1115 1.80e-57 205
Msa0371610 MtrunA17_Chr1g0207831 30.060 499 285 16 7 479 9 469 1.09e-60 206
Msa0371610 MtrunA17_Chr5g0431441 31.687 486 280 16 6 475 18 467 5.79e-60 204
Msa0371610 MtrunA17_Chr8g0377921 29.072 485 299 14 5 470 2 460 1.92e-59 202
Msa0371610 MtrunA17_Chr8g0380531 28.452 478 302 12 6 473 10 457 6.41e-59 201
Msa0371610 MtrunA17_Chr3g0121991 30.020 493 304 15 1 473 74 545 8.51e-59 202
Msa0371610 MtrunA17_Chr6g0453981 41.810 232 132 2 124 355 3 231 5.09e-58 191
Msa0371610 MtrunA17_Chr8g0377941 30.185 487 289 15 7 474 8 462 7.37e-58 198
Msa0371610 MtrunA17_Chr8g0336261 60.584 137 53 1 303 439 1 136 2.35e-57 186
Msa0371610 MtrunA17_Chr5g0426411 53.333 165 76 1 2 165 8 172 3.51e-57 187
Msa0371610 MtrunA17_Chr4g0053321 29.268 492 304 14 2 477 20 483 1.50e-56 196
Msa0371610 MtrunA17_Chr3g0122001 29.796 490 309 13 1 473 481 952 4.17e-56 201
Msa0371610 MtrunA17_Chr3g0122001 29.065 492 311 12 1 473 1 473 5.39e-55 197
Msa0371610 MtrunA17_Chr5g0401721 27.328 494 309 16 7 477 9 475 4.35e-56 194
Msa0371610 MtrunA17_Chr5g0393591 30.208 480 262 12 6 473 17 435 1.61e-55 192
Msa0371610 MtrunA17_Chr1g0207931 38.057 247 142 3 223 462 244 486 1.98e-55 192
Msa0371610 MtrunA17_Chr1g0207931 30.263 152 99 4 6 153 92 240 1.28e-11 66.6
Msa0371610 MtrunA17_Chr4g0053501 28.138 494 307 14 6 482 11 473 8.63e-55 191
Msa0371610 MtrunA17_Chr7g0249931 28.986 483 293 14 6 475 40 485 8.10e-54 188
Msa0371610 MtrunA17_Chr4g0072771 26.667 480 303 12 3 471 22 463 5.85e-53 185
Msa0371610 MtrunA17_Chr6g0453941 45.498 211 110 3 125 333 56 263 6.99e-53 179
Msa0371610 MtrunA17_Chr7g0275681 29.528 508 287 17 5 476 11 483 7.11e-53 185
Msa0371610 MtrunA17_Chr7g0243681 29.116 498 294 15 6 473 11 479 1.11e-52 185
Msa0371610 MtrunA17_Chr7g0265041 29.447 506 303 15 5 478 10 493 1.12e-52 185
Msa0371610 MtrunA17_Chr6g0454281 46.316 190 97 2 2 186 6 195 2.00e-52 176
Msa0371610 MtrunA17_Chr7g0243931 28.884 502 303 13 2 473 13 490 2.36e-52 184
Msa0371610 MtrunA17_Chr8g0366391 29.518 498 309 15 6 480 9 487 3.37e-52 184
Msa0371610 MtrunA17_Chr1g0153451 30.059 509 285 17 1 477 1 470 7.45e-52 182
Msa0371610 MtrunA17_Chr7g0243631 29.719 498 296 15 6 473 13 486 8.33e-52 182
Msa0371610 MtrunA17_Chr8g0374931 29.821 503 293 16 3 473 7 481 3.11e-51 181
Msa0371610 MtrunA17_Chr5g0431401 28.016 489 289 16 2 473 6 448 7.14e-51 179
Msa0371610 MtrunA17_Chr8g0336741 30.083 482 276 17 6 461 13 459 2.53e-50 178
Msa0371610 MtrunA17_Chr7g0243771 28.963 511 289 17 1 473 1 475 5.64e-50 177
Msa0371610 MtrunA17_Chr7g0243951 28.231 503 300 14 4 473 9 483 8.08e-50 177
Msa0371610 MtrunA17_Chr7g0265141 29.273 509 289 16 6 474 9 486 8.57e-50 177
Msa0371610 MtrunA17_Chr8g0336691 28.880 509 265 19 6 469 919 1375 8.67e-50 183
Msa0371610 MtrunA17_Chr8g0336691 26.358 497 303 15 1 469 8 469 5.04e-48 178
Msa0371610 MtrunA17_Chr8g0336691 27.869 488 255 16 6 462 480 901 1.56e-45 171
Msa0371610 MtrunA17_Chr5g0431361 28.395 486 286 16 6 473 12 453 8.95e-50 176
Msa0371610 MtrunA17_Chr5g0431421 28.513 491 286 15 2 474 6 449 1.77e-49 175
Msa0371610 MtrunA17_Chr7g0232401 27.160 486 300 14 1 462 1 456 2.28e-49 176
Msa0371610 MtrunA17_Chr6g0449931 29.594 517 270 19 1 473 1 467 6.29e-49 174
Msa0371610 MtrunA17_Chr3g0106231 29.106 481 283 16 6 474 18 452 7.98e-49 174
Msa0371610 MtrunA17_Chr5g0440421 28.008 507 315 17 2 475 6 495 9.46e-49 174
Msa0371610 MtrunA17_Chr4g0072761 26.681 476 299 12 6 471 15 450 1.43e-48 173
Msa0371610 MtrunA17_Chr8g0336651 28.770 504 260 18 6 462 781 1232 1.70e-48 179
Msa0371610 MtrunA17_Chr8g0336651 28.831 496 290 17 1 469 1 460 1.92e-47 176
Msa0371610 MtrunA17_Chr8g0336651 32.941 255 131 6 223 469 548 770 5.37e-37 145
Msa0371610 MtrunA17_Chr5g0431371 28.423 482 288 15 6 473 10 448 1.91e-48 172
Msa0371610 MtrunA17_Chr8g0373301 29.736 417 248 10 72 469 72 462 1.96e-48 173
Msa0371610 MtrunA17_Chr2g0294931 28.770 504 300 15 1 473 6 481 2.32e-48 173
Msa0371610 MtrunA17_Chr4g0044501 28.543 501 307 15 6 480 10 485 2.71e-48 173
Msa0371610 MtrunA17_Chr7g0232331 27.183 504 298 17 1 473 1 466 7.33e-48 171
Msa0371610 MtrunA17_Chr5g0419761 28.628 503 308 15 6 478 9 490 7.72e-48 172
Msa0371610 MtrunA17_Chr5g0448551 26.067 445 293 11 3 441 4 418 1.20e-47 171
Msa0371610 MtrunA17_Chr7g0243801 28.600 500 301 16 3 473 4 476 1.51e-47 171
Msa0371610 MtrunA17_Chr6g0462571 31.319 364 208 10 121 469 121 457 1.56e-47 171
Msa0371610 MtrunA17_Chr8g0335161 28.486 502 300 17 1 477 1 468 1.57e-47 171
Msa0371610 MtrunA17_Chr7g0243861 28.205 507 292 16 6 473 14 487 1.75e-47 171
Msa0371610 MtrunA17_Chr7g0232391 27.778 504 292 17 1 472 1 464 1.83e-47 170
Msa0371610 MtrunA17_Chr7g0232411 27.435 503 295 16 1 472 1 464 1.83e-47 170
Msa0371610 MtrunA17_Chr2g0294921 29.376 497 290 15 9 473 163 630 1.87e-47 173
Msa0371610 MtrunA17_Chr8g0336731 28.834 489 287 17 8 470 34 487 1.93e-47 171
Msa0371610 MtrunA17_Chr6g0486251 27.475 495 298 15 1 469 1 460 2.10e-47 170
Msa0371610 MtrunA17_Chr6g0486201 27.475 495 298 15 1 469 1 460 2.10e-47 170
Msa0371610 MtrunA17_Chr4g0014061 29.903 515 272 22 2 473 4 472 3.01e-47 170
Msa0371610 MtrunA17_Chr8g0335141 28.827 503 290 18 1 473 4 468 3.70e-47 169
Msa0371610 MtrunA17_Chr4g0060511 28.373 504 298 15 6 473 11 487 7.91e-47 169
Msa0371610 MtrunA17_Chr7g0249961 35.000 240 137 5 244 475 33 261 3.59e-46 161
Msa0371610 MtrunA17_Chr4g0011051 28.824 510 302 17 1 474 4 488 4.02e-46 167
Msa0371610 MtrunA17_Chr7g0265101 28.880 509 306 16 2 477 5 490 4.35e-46 167
Msa0371610 MtrunA17_Chr5g0419771 27.451 510 299 15 6 475 36 514 9.36e-46 167
Msa0371610 MtrunA17_Chr4g0066221 28.600 500 305 14 1 473 6 480 1.56e-45 166
Msa0371610 MtrunA17_Chr7g0265151 27.559 508 303 17 6 477 9 487 1.75e-45 165
Msa0371610 MtrunA17_Chr6g0459311 27.545 501 290 18 1 469 8 467 1.75e-45 165
Msa0371610 MtrunA17_Chr7g0232341 27.129 505 297 17 1 473 1 466 2.88e-45 164
Msa0371610 MtrunA17_Chr7g0275511 30.000 490 286 16 5 469 14 471 6.59e-45 164
Msa0371610 MtrunA17_Chr8g0374971 28.231 503 286 16 9 473 15 480 1.15e-44 163
Msa0371610 MtrunA17_Chr7g0265051 28.046 517 298 17 2 477 5 488 1.16e-44 163
Msa0371610 MtrunA17_Chr7g0243871 28.911 505 287 16 3 473 6 472 1.48e-44 163
Msa0371610 MtrunA17_Chr7g0243761 27.328 494 283 14 6 473 11 454 2.42e-44 162
Msa0371610 MtrunA17_Chr6g0462521 27.642 492 287 14 4 471 2 448 4.13e-44 161
Msa0371610 MtrunA17_Chr7g0232311 31.818 308 175 6 182 470 169 460 4.84e-44 161
Msa0371610 MtrunA17_Chr4g0066261 27.992 493 302 16 9 473 14 481 5.14e-44 161
Msa0371610 MtrunA17_Chr6g0462541 29.517 393 237 7 104 482 106 472 7.41e-44 160
Msa0371610 MtrunA17_Chr4g0066201 28.655 513 279 17 1 475 13 476 9.78e-44 160
Msa0371610 MtrunA17_Chr6g0462531 26.869 495 283 14 4 462 2 453 9.83e-44 160
Msa0371610 MtrunA17_Chr5g0428081 27.551 490 306 14 9 473 14 479 1.19e-43 160
Msa0371610 MtrunA17_Chr7g0218311 27.767 497 295 17 9 473 19 483 1.32e-43 160
Msa0371610 MtrunA17_Chr1g0179901 25.549 501 321 15 6 475 16 495 1.32e-43 160
Msa0371610 MtrunA17_Chr7g0235051 28.150 508 258 18 6 472 11 452 2.00e-43 159
Msa0371610 MtrunA17_Chr8g0374941 27.600 500 293 16 9 473 952 1417 2.04e-43 164
Msa0371610 MtrunA17_Chr8g0374941 27.629 485 276 16 9 455 479 926 6.82e-37 145
Msa0371610 MtrunA17_Chr8g0374941 26.653 484 286 17 9 457 14 463 8.76e-37 144
Msa0371610 MtrunA17_Chr5g0442561 27.701 509 298 18 3 476 2 475 3.27e-43 159
Msa0371610 MtrunA17_Chr5g0410941 26.946 501 309 14 1 473 18 489 3.33e-43 159
Msa0371610 MtrunA17_Chr8g0339461 31.746 378 213 10 112 466 109 464 5.70e-43 158
Msa0371610 MtrunA17_Chr5g0442601 28.119 505 305 19 3 476 401 878 7.98e-43 162
Msa0371610 MtrunA17_Chr5g0442601 36.667 180 93 4 246 414 164 333 4.16e-26 112
Msa0371610 MtrunA17_Chr1g0159551 25.926 486 270 16 11 462 19 448 8.57e-43 157
Msa0371610 MtrunA17_Chr8g0374901 28.056 499 290 15 9 473 15 478 8.79e-43 158
Msa0371610 MtrunA17_Chr8g0334851 26.923 494 301 14 1 466 1 462 8.92e-43 158
Msa0371610 MtrunA17_Chr8g0347281 28.306 484 282 13 5 462 17 461 1.32e-42 157
Msa0371610 MtrunA17_Chr1g0153461 39.269 219 114 6 278 477 1 219 1.53e-42 150
Msa0371610 MtrunA17_Chr6g0462551 32.450 302 175 7 182 469 174 460 2.21e-42 157
Msa0371610 MtrunA17_Chr8g0339631 28.947 380 226 9 104 462 101 457 2.31e-42 157
Msa0371610 MtrunA17_Chr7g0243781 26.654 514 290 15 3 473 6 475 3.14e-42 156
Msa0371610 MtrunA17_Chr8g0361371 26.810 511 286 19 2 470 3 467 3.35e-42 156
Msa0371610 MtrunA17_Chr8g0350881 27.976 504 290 13 7 473 13 480 3.72e-42 156
Msa0371610 MtrunA17_Chr5g0442541 29.051 506 284 18 3 474 2 466 4.10e-42 155
Msa0371610 MtrunA17_Chr8g0347271 27.789 475 296 11 5 462 18 462 7.37e-42 155
Msa0371610 MtrunA17_Chr8g0339451 31.675 382 216 10 104 462 93 452 8.09e-42 155
Msa0371610 MtrunA17_Chr3g0079731 26.901 513 298 17 1 471 1 478 1.40e-41 154
Msa0371610 MtrunA17_Chr4g0066281 27.789 493 287 16 9 473 15 466 2.45e-41 154
Msa0371610 MtrunA17_Chr5g0442521 26.378 508 297 16 3 470 2 472 3.15e-41 154
Msa0371610 MtrunA17_Chr5g0442581 26.744 516 304 15 3 479 2 482 4.00e-41 154
Msa0371610 MtrunA17_Chr7g0265111 26.848 514 311 17 6 482 39 524 6.09e-41 154
Msa0371610 MtrunA17_Chr1g0173121 25.470 479 292 14 7 462 15 451 1.08e-40 152
Msa0371610 MtrunA17_Chr8g0334831 26.735 490 269 15 1 443 1 447 1.25e-40 152
Msa0371610 MtrunA17_Chr5g0448521 27.451 510 293 19 3 476 2 470 2.11e-40 151
Msa0371610 MtrunA17_Chr8g0334861 27.455 499 298 18 1 472 1 462 2.73e-40 150
Msa0371610 MtrunA17_Chr8g0339601 33.117 308 170 9 177 461 24 318 3.08e-40 147
Msa0371610 MtrunA17_Chr4g0066151 27.218 496 297 15 7 473 19 479 6.69e-40 150
Msa0371610 MtrunA17_Chr6g0454111 43.558 163 89 2 162 323 23 183 8.57e-40 142
Msa0371610 MtrunA17_Chr6g0463851 26.946 501 298 16 9 473 14 482 2.02e-39 149
Msa0371610 MtrunA17_Chr5g0401851 25.540 509 299 17 8 473 12 483 6.97e-39 147
Msa0371610 MtrunA17_Chr4g0066131 26.016 492 308 11 7 473 14 474 9.37e-39 147
Msa0371610 MtrunA17_Chr8g0339441 38.647 207 108 4 280 467 217 423 1.44e-38 145
Msa0371610 MtrunA17_Chr5g0442511 26.471 510 280 16 3 476 46 496 1.97e-38 146
Msa0371610 MtrunA17_Chr4g0044521 26.585 489 301 16 7 471 10 464 2.01e-38 145
Msa0371610 MtrunA17_Chr2g0329111 28.074 488 293 18 1 459 1 459 5.62e-38 145
Msa0371610 MtrunA17_Chr5g0416741 24.440 491 326 11 7 473 14 483 2.88e-37 143
Msa0371610 MtrunA17_Chr3g0118741 95.000 60 3 0 1 60 1 60 4.69e-37 130
Msa0371610 MtrunA17_Chr5g0432731 31.752 274 147 6 219 475 48 298 5.29e-37 138
Msa0371610 MtrunA17_Chr8g0370941 24.266 511 315 14 4 471 5 486 2.29e-36 140
Msa0371610 MtrunA17_Chr6g0463861 25.992 504 306 17 1 473 6 473 2.93e-36 140
Msa0371610 MtrunA17_Chr5g0429711 26.719 509 292 21 1 477 6 465 4.80e-36 139
Msa0371610 MtrunA17_Chr5g0442491 26.654 514 299 16 3 476 2 477 7.76e-36 139
Msa0371610 MtrunA17_Chr4g0066171 25.737 509 294 14 1 473 16 476 1.24e-35 138
Msa0371610 MtrunA17_Chr5g0403641 30.662 287 156 8 223 478 236 510 2.40e-35 138
Msa0371610 MtrunA17_Chr7g0243851 35.401 274 155 9 219 473 172 442 2.53e-35 137
Msa0371610 MtrunA17_Chr5g0416821 25.306 490 334 12 7 483 15 485 2.57e-35 137
Msa0371610 MtrunA17_Chr5g0429681 25.607 535 270 21 1 477 39 503 4.24e-35 137
Msa0371610 MtrunA17_Chr7g0243711 36.321 212 117 5 279 473 106 316 1.13e-34 132
Msa0371610 MtrunA17_Chr6g0463891 27.383 493 311 15 7 473 13 484 1.75e-34 135
Msa0371610 MtrunA17_Chr5g0420801 26.423 492 306 18 2 473 3 458 4.84e-34 133
Msa0371610 MtrunA17_Chr2g0294941 27.671 365 220 11 115 455 17 361 5.80e-34 131
Msa0371610 MtrunA17_Chr3g0106251 29.545 308 187 8 176 474 8 294 7.28e-34 130
Msa0371610 MtrunA17_Chr4g0044481 27.033 418 255 12 6 417 27 400 1.16e-33 131
Msa0371610 MtrunA17_Chr1g0165701 25.355 493 317 13 7 473 16 483 1.34e-33 132
Msa0371610 MtrunA17_Chr4g0042891 25.714 490 317 17 2 472 3 464 1.46e-33 132
Msa0371610 MtrunA17_Chr7g0241801 27.115 461 263 21 3 450 6 406 2.10e-33 131
Msa0371610 MtrunA17_Chr1g0196851 25.103 486 281 16 2 454 45 480 2.76e-33 132
Msa0371610 MtrunA17_Chr8g0355221 24.494 494 323 13 7 473 16 486 4.30e-33 131
Msa0371610 MtrunA17_Chr3g0079711 38.587 184 94 4 307 471 3 186 6.54e-33 123
Msa0371610 MtrunA17_Chr4g0029151 23.355 471 307 12 1 454 15 448 1.11e-32 129
Msa0371610 MtrunA17_Chr4g0029131 24.790 476 294 16 1 454 7 440 1.86e-32 130
Msa0371610 MtrunA17_Chr8g0361411 27.536 483 298 20 6 473 8 453 7.12e-32 127
Msa0371610 MtrunA17_Chr2g0278721 29.109 505 283 24 6 478 517 978 1.08e-31 129
Msa0371610 MtrunA17_Chr2g0278721 24.565 460 301 16 6 450 15 443 9.76e-27 114
Msa0371610 MtrunA17_Chr2g0302961 24.802 504 300 15 6 473 5 465 1.16e-31 126
Msa0371610 MtrunA17_Chr7g0243911 36.453 203 101 6 277 462 18 209 1.80e-31 120
Msa0371610 MtrunA17_Chr4g0042931 25.896 502 299 16 2 472 3 462 2.11e-31 126
Msa0371610 MtrunA17_Chr7g0241781 27.505 469 259 23 3 454 6 410 3.72e-31 124
Msa0371610 MtrunA17_Chr8g0382021 24.187 492 280 17 11 462 39 477 5.93e-31 125
Msa0371610 MtrunA17_Chr1g0207881 35.185 162 97 2 326 481 233 392 7.40e-31 123
Msa0371610 MtrunA17_Chr1g0207881 25.000 296 170 11 6 289 8 263 6.76e-12 67.0
Msa0371610 MtrunA17_Chr2g0302991 28.477 302 180 7 193 473 176 462 1.35e-30 123
Msa0371610 MtrunA17_Chr2g0307961 27.328 494 299 18 5 474 12 469 2.73e-30 122
Msa0371610 MtrunA17_Chr8g0336251 26.681 461 291 15 6 447 7 439 7.03e-30 121
Msa0371610 MtrunA17_Chr8g0336321 26.681 461 291 15 6 447 7 439 7.66e-30 121
Msa0371610 MtrunA17_Chr8g0369341 24.900 502 311 18 2 473 3 468 8.58e-30 121
Msa0371610 MtrunA17_Chr6g0466831 25.410 488 310 19 6 477 18 467 1.53e-29 120
Msa0371610 MtrunA17_Chr7g0243611 40.690 145 82 3 279 420 134 277 3.25e-28 114
Msa0371610 MtrunA17_Chr6g0466841 24.846 487 314 18 6 477 18 467 3.53e-28 116
Msa0371610 MtrunA17_Chr6g0464091 26.415 477 282 20 2 450 13 448 1.05e-27 115
Msa0371610 MtrunA17_Chr8g0367221 26.580 459 286 18 6 444 798 1225 4.32e-27 115
Msa0371610 MtrunA17_Chr8g0367221 26.681 461 282 20 6 444 12 438 2.47e-24 107
Msa0371610 MtrunA17_Chr8g0367221 25.435 460 300 19 6 449 1288 1720 4.82e-24 106
Msa0371610 MtrunA17_Chr7g0232351 27.619 420 233 16 1 391 1 378 2.37e-26 110
Msa0371610 MtrunA17_Chr5g0427561 55.952 84 37 0 391 474 2 85 3.18e-26 102
Msa0371610 MtrunA17_Chr7g0243811 25.708 424 251 14 18 420 1 381 5.06e-26 109
Msa0371610 MtrunA17_Chr4g0040691 25.000 500 295 21 6 474 8 458 3.29e-25 108
Msa0371610 MtrunA17_Chr6g0482061 24.792 480 314 12 6 461 11 467 3.86e-25 108
Msa0371610 MtrunA17_Chr8g0337381 45.455 121 60 2 353 469 3 121 5.80e-25 100
Msa0371610 MtrunA17_Chr2g0302851 25.322 466 294 18 2 450 11 439 6.24e-25 107
Msa0371610 MtrunA17_Chr5g0409591 25.207 484 277 18 7 440 5 453 8.22e-25 107
Msa0371610 MtrunA17_Chr2g0283041 24.841 471 284 20 6 450 7 433 7.52e-24 103
Msa0371610 MtrunA17_Chr6g0454391 62.687 67 25 0 363 429 8 74 7.55e-24 96.7
Msa0371610 MtrunA17_Chr5g0431431 29.804 255 151 8 179 429 113 343 3.02e-23 100
Msa0371610 MtrunA17_Chr2g0278741 24.622 463 297 17 6 450 97 525 3.39e-23 102
Msa0371610 MtrunA17_Chr4g0040711 25.591 465 277 19 6 444 8 429 6.40e-23 101
Msa0371610 MtrunA17_Chr6g0454381 34.058 138 91 0 124 261 3 140 9.72e-23 94.0
Msa0371610 MtrunA17_Chr7g0231631 28.346 254 173 6 224 473 11 259 2.53e-22 96.7
Msa0371610 MtrunA17_Chr5g0427571 31.718 227 145 6 223 442 45 268 4.24e-22 96.7
Msa0371610 MtrunA17_Chr8g0357361 29.858 211 138 6 208 416 49 251 4.29e-21 92.8
Msa0371610 MtrunA17_Chr4g0066141 37.580 157 81 4 334 473 195 351 7.24e-21 94.0
Msa0371610 MtrunA17_Chr7g0250021 26.879 346 209 12 6 343 12 321 1.12e-20 92.8
Msa0371610 MtrunA17_Chr3g0092031 30.588 170 108 4 282 445 5 170 1.43e-20 89.7
Msa0371610 MtrunA17_Chr4g0069611 29.289 239 149 9 220 450 212 438 4.09e-20 92.8
Msa0371610 MtrunA17_Chr2g0319751 22.863 503 318 18 1 476 478 937 9.19e-20 92.8
Msa0371610 MtrunA17_Chr2g0319751 22.449 490 298 19 6 475 8 435 2.13e-17 85.5
Msa0371610 MtrunA17_Chr2g0319791 24.893 466 291 19 1 444 1 429 5.30e-19 89.4
Msa0371610 MtrunA17_Chr2g0319731 23.011 465 289 17 6 444 25 446 8.86e-19 89.0
Msa0371610 MtrunA17_Chr2g0319801 24.242 462 287 17 6 444 8 429 4.90e-18 86.7
Msa0371610 MtrunA17_Chr2g0319761 29.208 202 133 5 282 474 258 458 7.33e-18 85.9
Msa0371610 MtrunA17_Chr4g0039881 28.085 235 153 7 222 450 191 415 1.00e-17 85.5
Msa0371610 MtrunA17_Chr7g0243731 45.588 68 36 1 350 416 6 73 6.38e-15 69.7
Msa0371610 MtrunA17_Chr1g0207911 26.190 252 163 7 7 251 9 244 7.96e-13 68.6
Msa0371610 MtrunA17_Chr2g0321331 29.012 162 90 5 291 444 94 238 9.08e-12 65.5
Msa0371610 MtrunA17_Chr7g0267931 67.568 37 11 1 11 46 25 61 1.02e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0371610 AT1G22380.1 50.633 474 232 2 2 474 9 481 0.0 521
Msa0371610 AT1G22360.1 49.049 473 239 2 3 474 7 478 1.99e-177 506
Msa0371610 AT1G22400.1 48.101 474 243 3 3 474 10 482 1.17e-174 500
Msa0371610 AT1G22340.1 47.479 476 249 1 3 477 10 485 3.80e-174 498
Msa0371610 AT1G22370.2 49.471 473 232 3 3 474 10 476 2.90e-171 491
Msa0371610 AT1G22360.2 47.569 473 234 3 3 474 7 466 1.73e-168 483
Msa0371610 AT1G78270.1 46.555 479 252 4 3 479 10 486 1.24e-159 462
Msa0371610 AT1G22370.1 48.684 304 154 2 172 474 4 306 9.08e-101 305
Msa0371610 AT3G46660.1 36.831 486 261 14 1 473 6 458 5.75e-88 277
Msa0371610 AT5G59590.1 35.699 479 264 13 3 473 7 449 4.90e-86 271
Msa0371610 AT5G59580.1 35.146 478 273 12 4 477 7 451 2.30e-84 268
Msa0371610 AT3G46690.1 36.152 473 267 10 3 471 6 447 4.58e-84 266
Msa0371610 AT3G46650.1 34.719 481 253 11 1 475 5 430 5.21e-84 266
Msa0371610 AT2G36970.1 31.481 486 296 10 3 473 7 470 5.95e-84 268
Msa0371610 AT3G11340.1 34.316 475 276 9 2 474 5 445 1.92e-83 265
Msa0371610 AT5G38010.1 34.864 479 274 11 2 473 6 453 2.96e-83 265
Msa0371610 AT3G46680.1 34.792 480 266 11 1 470 4 446 3.35e-83 264
Msa0371610 AT3G46670.1 34.855 482 273 13 1 476 1 447 3.43e-83 264
Msa0371610 AT5G38040.1 35.181 469 258 13 14 473 18 449 1.07e-80 258
Msa0371610 AT3G46700.1 33.474 475 276 10 3 473 6 444 9.35e-78 250
Msa0371610 AT3G21560.1 31.288 489 289 12 5 473 11 472 3.83e-76 247
Msa0371610 AT2G28080.1 32.917 480 290 10 10 480 22 478 4.96e-75 244
Msa0371610 AT5G05880.1 32.909 471 277 11 6 470 8 445 7.98e-75 243
Msa0371610 AT5G05890.1 32.632 475 277 11 6 470 8 449 1.87e-73 239
Msa0371610 AT3G46720.1 32.851 484 263 10 3 473 6 440 9.62e-73 237
Msa0371610 AT3G55710.1 32.049 493 274 18 6 478 8 459 1.51e-71 234
Msa0371610 AT4G15480.1 31.405 484 292 13 6 473 19 478 2.23e-70 232
Msa0371610 AT4G15500.1 30.515 485 293 11 5 474 8 463 4.20e-70 231
Msa0371610 AT5G05870.1 31.158 475 292 9 6 473 8 454 1.05e-69 229
Msa0371610 AT4G15490.1 31.622 487 288 14 6 474 8 467 1.19e-69 230
Msa0371610 AT5G05900.1 30.737 475 281 11 6 470 8 444 4.23e-69 228
Msa0371610 AT3G55700.1 29.569 487 294 14 6 480 8 457 1.38e-67 224
Msa0371610 AT5G05860.1 32.700 474 280 10 6 474 9 448 1.73e-67 223
Msa0371610 AT2G26480.1 31.799 478 284 11 3 474 5 446 5.64e-67 222
Msa0371610 AT2G31750.1 31.056 483 290 16 4 475 6 456 7.13e-63 211
Msa0371610 AT2G31750.2 31.056 483 290 16 4 475 6 456 1.70e-62 211
Msa0371610 AT3G02100.1 30.913 482 287 15 4 471 11 460 8.79e-62 209
Msa0371610 AT1G05675.1 29.079 478 302 11 1 470 1 449 5.59e-61 206
Msa0371610 AT1G05680.1 30.149 471 290 12 1 462 1 441 3.50e-60 204
Msa0371610 AT2G43820.1 29.253 482 291 15 3 473 4 446 6.31e-59 201
Msa0371610 AT5G17050.1 28.125 480 302 12 6 475 12 458 6.38e-58 198
Msa0371610 AT2G43840.2 28.033 478 296 13 6 473 7 446 9.33e-57 195
Msa0371610 AT2G43840.1 28.033 478 296 13 6 473 7 446 1.25e-56 195
Msa0371610 AT2G30140.1 30.123 488 288 14 2 477 9 455 1.26e-55 192
Msa0371610 AT2G30140.2 30.123 488 287 14 2 477 9 454 1.51e-55 192
Msa0371610 AT4G15550.1 29.412 493 291 15 5 472 12 472 2.10e-55 192
Msa0371610 AT2G31790.1 29.851 469 292 12 3 462 5 445 5.01e-55 191
Msa0371610 AT5G17040.1 27.521 476 298 11 6 474 5 440 1.67e-54 189
Msa0371610 AT4G34131.1 29.980 507 285 16 3 473 7 479 2.57e-54 189
Msa0371610 AT2G36750.1 32.072 502 283 18 6 475 10 485 2.68e-54 189
Msa0371610 AT2G36800.1 31.275 502 289 18 6 475 12 489 2.79e-54 189
Msa0371610 AT1G30530.1 27.004 474 307 11 6 474 12 451 5.69e-53 185
Msa0371610 AT1G24100.1 29.039 489 289 14 4 473 9 458 2.18e-52 184
Msa0371610 AT2G15490.3 27.812 489 314 10 6 473 7 477 1.17e-51 182
Msa0371610 AT2G30150.2 29.019 479 290 13 6 473 13 452 1.74e-51 181
Msa0371610 AT1G05560.1 28.112 498 291 14 5 479 4 457 3.01e-51 181
Msa0371610 AT5G17040.2 32.248 307 191 4 170 474 47 338 5.98e-51 177
Msa0371610 AT1G05560.2 28.112 498 291 14 5 479 54 507 1.02e-50 181
Msa0371610 AT2G15480.1 27.711 498 313 12 1 473 5 480 1.30e-50 179
Msa0371610 AT2G15490.1 27.846 492 313 11 6 473 7 480 1.88e-50 179
Msa0371610 AT1G05530.1 27.309 498 290 16 4 474 3 455 2.10e-50 178
Msa0371610 AT3G53160.1 30.099 505 294 17 6 477 8 486 7.56e-50 177
Msa0371610 AT4G14090.1 29.132 484 290 16 3 472 10 454 1.14e-49 176
Msa0371610 AT2G30150.1 28.632 475 289 13 10 473 1 436 1.86e-49 175
Msa0371610 AT2G36770.1 27.912 498 312 13 6 476 14 491 4.11e-49 176
Msa0371610 AT2G15480.2 27.362 508 312 13 1 473 5 490 8.27e-49 175
Msa0371610 AT2G23250.1 28.512 477 287 17 9 473 1 435 1.18e-48 173
Msa0371610 AT2G36780.1 29.746 511 284 17 6 475 14 490 1.22e-48 174
Msa0371610 AT2G23260.1 27.479 484 301 15 3 473 7 453 1.23e-48 174
Msa0371610 AT4G01070.1 27.016 496 282 13 3 462 5 456 2.36e-48 173
Msa0371610 AT5G26310.1 28.008 507 282 19 4 472 5 466 2.61e-47 171
Msa0371610 AT2G36760.1 28.968 504 299 17 6 476 14 491 6.65e-47 170
Msa0371610 AT5G37950.1 32.800 375 214 12 22 391 2 343 7.69e-47 166
Msa0371610 AT4G34135.1 28.600 507 293 13 3 473 8 481 1.01e-46 169
Msa0371610 AT5G17030.1 29.801 302 197 3 175 475 170 457 2.18e-46 167
Msa0371610 AT3G22250.1 27.273 462 284 13 3 443 5 435 3.89e-46 167
Msa0371610 AT1G10400.1 30.986 497 285 19 3 476 4 465 4.05e-46 167
Msa0371610 AT5G66690.1 27.579 504 288 18 4 472 5 466 4.74e-46 167
Msa0371610 AT5G37950.2 31.551 374 214 10 22 391 2 337 1.20e-45 162
Msa0371610 AT4G36770.1 29.412 476 282 17 6 458 4 448 8.45e-45 163
Msa0371610 AT1G01420.2 28.270 474 275 15 5 450 10 446 1.62e-44 163
Msa0371610 AT1G01420.1 28.270 474 275 15 5 450 7 443 1.65e-44 163
Msa0371610 AT3G53150.1 27.930 512 313 15 3 476 19 512 3.40e-44 163
Msa0371610 AT4G34138.1 27.362 508 293 15 4 473 9 478 8.00e-44 161
Msa0371610 AT5G14860.1 28.119 505 289 18 6 473 8 475 9.51e-42 155
Msa0371610 AT2G18570.1 26.590 519 278 19 1 471 1 464 2.07e-41 154
Msa0371610 AT1G01390.2 28.980 490 284 17 5 466 24 477 2.14e-41 155
Msa0371610 AT1G01390.1 28.980 490 284 17 5 466 7 460 2.17e-41 154
Msa0371610 AT3G50740.1 27.151 523 278 20 4 475 5 475 4.38e-41 154
Msa0371610 AT2G16890.2 27.381 504 285 17 6 473 9 467 6.15e-41 153
Msa0371610 AT3G16520.3 31.579 323 190 10 162 471 153 457 1.09e-37 144
Msa0371610 AT2G29710.1 25.918 490 317 16 3 474 2 463 3.28e-37 142
Msa0371610 AT5G03490.1 28.131 487 296 20 2 473 15 462 4.04e-37 142
Msa0371610 AT2G36790.1 35.273 275 148 8 223 475 223 489 3.31e-36 140
Msa0371610 AT3G16520.1 32.808 317 176 11 162 459 153 451 1.24e-35 138
Msa0371610 AT3G16520.2 31.922 307 178 10 162 455 153 441 1.63e-35 137
Msa0371610 AT3G21790.1 26.653 499 315 15 4 473 2 478 6.14e-35 137
Msa0371610 AT2G18560.1 29.934 304 162 10 201 471 89 374 2.77e-34 132
Msa0371610 AT2G29730.1 24.536 485 324 17 6 474 5 463 3.46e-34 134
Msa0371610 AT1G51210.1 26.144 459 279 14 4 447 18 431 2.10e-33 131
Msa0371610 AT1G73880.1 26.543 486 312 14 4 474 12 467 2.39e-33 132
Msa0371610 AT5G12890.1 26.747 501 283 20 6 462 10 470 2.66e-33 132
Msa0371610 AT5G65550.1 26.739 460 299 15 4 451 7 440 2.91e-32 129
Msa0371610 AT3G21750.1 23.684 494 332 13 4 476 2 471 4.63e-32 128
Msa0371610 AT5G49690.1 26.754 456 280 18 6 445 10 427 4.89e-32 128
Msa0371610 AT1G07240.1 27.198 364 223 11 131 474 135 476 1.14e-31 127
Msa0371610 AT3G21780.1 25.984 508 311 19 4 480 2 475 1.15e-31 127
Msa0371610 AT4G15260.1 28.328 293 173 6 209 478 81 359 1.82e-31 124
Msa0371610 AT3G21760.1 24.701 502 323 14 4 473 2 480 2.84e-31 126
Msa0371610 AT3G21800.1 31.673 281 154 8 223 478 213 480 3.33e-31 126
Msa0371610 AT1G07250.1 24.063 507 326 14 1 478 1 477 3.56e-31 125
Msa0371610 AT2G29750.1 25.050 503 319 17 6 480 8 480 5.25e-31 125
Msa0371610 AT2G29740.1 31.250 256 145 9 223 463 225 464 2.26e-30 123
Msa0371610 AT4G15280.1 23.211 517 311 15 4 476 2 476 2.97e-30 123
Msa0371610 AT1G07260.1 30.597 268 155 8 223 474 220 472 4.19e-30 122
Msa0371610 AT2G16890.3 25.926 459 260 17 6 429 9 422 5.23e-30 121
Msa0371610 AT4G15280.2 23.404 517 310 15 4 476 34 508 5.58e-30 122
Msa0371610 AT4G27570.1 24.406 463 291 14 4 450 5 424 5.04e-27 113
Msa0371610 AT4G27560.1 24.089 494 301 17 4 474 5 447 5.14e-27 113
Msa0371610 AT2G22590.1 26.415 477 277 19 4 449 13 446 9.72e-26 110
Msa0371610 AT5G54010.1 23.838 495 312 20 1 476 1 449 1.29e-25 109
Msa0371610 AT5G53990.1 24.043 470 285 16 1 450 1 418 7.05e-25 107
Msa0371610 AT1G64910.1 24.675 462 280 18 1 444 1 412 8.97e-24 103
Msa0371610 AT3G29630.1 23.918 439 268 13 1 426 1 386 7.79e-22 98.2
Msa0371610 AT5G54060.1 24.034 466 306 16 7 455 14 448 1.25e-21 97.8
Msa0371610 AT4G34135.2 26.571 350 201 10 3 327 8 326 6.22e-21 94.4
Msa0371610 AT2G22930.1 23.158 475 283 18 1 450 1 418 2.16e-20 94.0
Msa0371610 AT1G64920.1 22.782 496 310 19 1 472 1 447 3.55e-20 93.2
Msa0371610 AT3G29630.2 23.059 438 247 13 1 426 1 360 2.01e-19 90.9
Msa0371610 AT1G06000.1 27.612 268 165 12 223 473 178 433 6.52e-19 89.4
Msa0371610 AT4G09500.2 21.776 473 292 16 1 450 1 418 5.51e-18 86.7
Msa0371610 AT1G50580.1 22.222 459 296 15 1 444 1 413 1.15e-16 82.8
Msa0371610 AT4G09500.1 25.714 175 123 3 283 450 219 393 1.69e-16 82.0
Msa0371610 AT4G01070.2 22.427 379 219 11 3 350 5 339 3.92e-14 73.9

Find 115 sgRNAs with CRISPR-Local

Find 196 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGCAAGTGGTTCGAGTTTA+TGG 0.083284 3_1:-69834672 Msa0371610:CDS
TTATGCAACACTTGGAAAAT+AGG 0.198741 3_1:-69834256 Msa0371610:CDS
AAATTAACCATGATGTTAAA+AGG 0.220501 3_1:-69834228 Msa0371610:CDS
GTTGCATCTTTATCTGATTC+TGG 0.253266 3_1:+69837316 None:intergenic
ACTATTTGTTGGCCTTTCTT+TGG 0.270197 3_1:-69834304 Msa0371610:CDS
TGGAAGAGTGGCTAAGGATT+TGG 0.280456 3_1:-69837155 Msa0371610:CDS
GATTGCTCATTTGATTGATT+TGG 0.290032 3_1:-69833774 Msa0371610:three_prime_UTR
AATCAACACATTTGAAGAAT+TGG 0.298250 3_1:-69834800 Msa0371610:CDS
GCATAACATGGTTGAATAGA+TGG 0.304278 3_1:-69834633 Msa0371610:CDS
CATCATTTCCATCACAAGTT+TGG 0.304396 3_1:+69834195 None:intergenic
CTAATACAACATGTGGCTTT+TGG 0.304454 3_1:+69837524 None:intergenic
CTTGGAGCTGACTTTGTTAA+GGG 0.310099 3_1:-69837379 Msa0371610:CDS
GAAATGTAATAGATTTGTTT+TGG 0.327053 3_1:-69833752 Msa0371610:three_prime_UTR
TATGCAACACTTGGAAAATA+GGG 0.331166 3_1:-69834255 Msa0371610:CDS
GGACCAATGTCATATATGTT+TGG 0.332878 3_1:+69834742 None:intergenic
GACCAATGTCATATATGTTT+GGG 0.345790 3_1:+69834743 None:intergenic
TCTTGGAGCTGACTTTGTTA+AGG 0.346942 3_1:-69837380 Msa0371610:CDS
ACCATTACAACGTAGGAGTT+TGG 0.354802 3_1:+69837456 None:intergenic
GAAATGATGGAAGGAGAAAA+AGG 0.359746 3_1:-69834181 Msa0371610:CDS
CTAGATGAAGTTAAGGATAG+AGG 0.360667 3_1:-69834442 Msa0371610:CDS
TGCTTCTACTTGTGGGTTTG+TGG 0.362942 3_1:-69837107 Msa0371610:CDS
GATGGCAATTATGACTTTGC+TGG 0.363761 3_1:-69837175 Msa0371610:CDS
TCAGTCCTATATGTTAATTA+TGG 0.370543 3_1:-69834601 Msa0371610:CDS
GGAAGAGTGGCTAAGGATTT+GGG 0.372307 3_1:-69837154 Msa0371610:CDS
TCAGCAATTATACAAGTAAC+TGG 0.373014 3_1:+69837196 None:intergenic
TTTGGACTGCTTCTACTTGT+GGG 0.381446 3_1:-69837114 Msa0371610:CDS
CTTTGGAAACAAGTTTAGAT+TGG 0.385572 3_1:-69834951 Msa0371610:CDS
ATGGTCTCAAATTGAAAATC+AGG 0.386462 3_1:+69837352 None:intergenic
TATCTTTGAATATGTTCCTT+TGG 0.386999 3_1:-69833796 Msa0371610:three_prime_UTR
CGGTTTAATTTACCTTTGAA+TGG 0.393186 3_1:+69837043 None:intergenic
TCTTCACCCATTACTACATC+TGG 0.399736 3_1:+69834490 None:intergenic
GTGAGCAACAAACAAATTGT+AGG 0.402362 3_1:-69834282 Msa0371610:CDS
CTTTGGACTGCTTCTACTTG+TGG 0.406475 3_1:-69837115 Msa0371610:CDS
GCTTCTACTTGTGGGTTTGT+GGG 0.409693 3_1:-69837106 Msa0371610:CDS
CAGGTGTGCCTACTATTTGT+TGG 0.410855 3_1:-69834315 Msa0371610:CDS
TGAATTCAACCACAAACGTT+TGG 0.432420 3_1:-69837410 Msa0371610:CDS
GTGAAGCACTTGACACCCTT+AGG 0.440930 3_1:-69834774 Msa0371610:CDS
TCTGATTCTGGTAAACCATC+AGG 0.441558 3_1:+69837328 None:intergenic
AAACGTTTGGTAAAGTCTCT+TGG 0.443702 3_1:-69837397 Msa0371610:CDS
CACTTCCATAATTAACATAT+AGG 0.451185 3_1:+69834596 None:intergenic
CTGATGGATGATCAAGAACT+TGG 0.453339 3_1:+69834392 None:intergenic
GCCAAACTCCTACGTTGTAA+TGG 0.460605 3_1:-69837457 Msa0371610:CDS
TCTGTGATTCTTATGAAGCT+TGG 0.465282 3_1:+69834892 None:intergenic
ACAAGTTTAGATTGGATCTC+GGG 0.469911 3_1:-69834943 Msa0371610:CDS
GTTTGTTGCTCACCAAAGAA+AGG 0.473094 3_1:+69834292 None:intergenic
GAGACTTTACCAAACGTTTG+TGG 0.473697 3_1:+69837401 None:intergenic
CAAACTTGTGATGGAAATGA+TGG 0.476926 3_1:-69834194 Msa0371610:CDS
CAGTGTTCACAAAGGTTATG+TGG 0.477175 3_1:+69837431 None:intergenic
GCTACAGATGCTACTAATGT+TGG 0.477934 3_1:-69834118 Msa0371610:CDS
AATTCCAACCACAATGAGTC+AGG 0.479825 3_1:+69834359 None:intergenic
GATGTAATGTTTAATTTCCA+AGG 0.484094 3_1:-69834862 Msa0371610:CDS
AACAAGTTTAGATTGGATCT+CGG 0.488590 3_1:-69834944 Msa0371610:CDS
ACATGACCTTGTGCTGGAAA+TGG 0.488947 3_1:+69837499 None:intergenic
ATGAGGCCAGATGTAGTAAT+GGG 0.489308 3_1:-69834496 Msa0371610:CDS
CCCATGCAAATTCTTTCAAG+TGG 0.489947 3_1:+69834554 None:intergenic
AATTAACCATGATGTTAAAA+GGG 0.491706 3_1:-69834227 Msa0371610:CDS
CTTGATCATCCATCAGTTGG+AGG 0.492019 3_1:-69834385 Msa0371610:CDS
CACTTTCCTGAGATGGAACA+TGG 0.494914 3_1:-69834700 Msa0371610:CDS
GGTTCCTGACTCATTGTGGT+TGG 0.497226 3_1:-69834363 Msa0371610:CDS
GTAAAACCATGTTCCATCTC+AGG 0.499581 3_1:+69834694 None:intergenic
GTCAACATGACAATGATTGA+TGG 0.501093 3_1:+69833956 None:intergenic
ATACAAGTAACTGGAATATG+AGG 0.502466 3_1:+69837205 None:intergenic
ACCACTTGAAAGAATTTGCA+TGG 0.503004 3_1:-69834555 Msa0371610:CDS
TGGTAGGCACTTTCCTGAGA+TGG 0.504695 3_1:-69834707 Msa0371610:CDS
ACACTTGAAACTATTTCAGC+AGG 0.509242 3_1:-69834334 Msa0371610:CDS
AATGAGGCCAGATGTAGTAA+TGG 0.509860 3_1:-69834497 Msa0371610:CDS
AAGAAAGGCCAACAAATAGT+AGG 0.513282 3_1:+69834307 None:intergenic
AGTTTGGCTAGTTGCATGAA+AGG 0.517620 3_1:+69837472 None:intergenic
GTTCTTGATCATCCATCAGT+TGG 0.519116 3_1:-69834388 Msa0371610:CDS
AGAGGAATTCTTCCATTCAA+AGG 0.528099 3_1:-69837055 Msa0371610:intron
GGGTTCACATGACCTTGTGC+TGG 0.530108 3_1:+69837493 None:intergenic
ATTGGTCCACTTCACATGCT+TGG 0.530255 3_1:-69834727 Msa0371610:CDS
TTGATCATCCATCAGTTGGA+GGG 0.530662 3_1:-69834384 Msa0371610:CDS
TGTGGGATATTTGCAATTCG+AGG 0.531454 3_1:-69837089 Msa0371610:CDS
AGAGATGAGACAAAACTGCT+TGG 0.532493 3_1:-69834155 Msa0371610:CDS
CACAGGATGTTCTAACGTTG+TGG 0.532549 3_1:-69837294 Msa0371610:CDS
CTTTGCTGGAAGAGTGGCTA+AGG 0.536699 3_1:-69837161 Msa0371610:CDS
TTCGAGGAGCTTGTCAAAAG+AGG 0.537426 3_1:-69837073 Msa0371610:CDS
AGAGATAACCAAACTTGTGA+TGG 0.538882 3_1:-69834203 Msa0371610:CDS
TGATTCTTATGAAGCTTGGA+AGG 0.539095 3_1:+69834896 None:intergenic
AAGTAGAAGCAGTCCAAAGT+TGG 0.540479 3_1:+69837119 None:intergenic
GTCAGGAACCCTCCAACTGA+TGG 0.542338 3_1:+69834376 None:intergenic
TTCTGGTAAACCATCAGGTA+TGG 0.543800 3_1:+69837333 None:intergenic
TGAAGCACTTGACACCCTTA+GGG 0.543855 3_1:-69834773 Msa0371610:CDS
ATAGAGGATACATAACTAGT+TGG 0.545228 3_1:-69834426 Msa0371610:CDS
GCATTCGAGAGATCCAACTT+TGG 0.550641 3_1:-69837132 Msa0371610:CDS
GTTACTTGTATAATTGCTGA+TGG 0.554672 3_1:-69837193 Msa0371610:CDS
GTTTGGCTAGTTGCATGAAA+GGG 0.555128 3_1:+69837473 None:intergenic
CCACTTGAAAGAATTTGCAT+GGG 0.559901 3_1:-69834554 Msa0371610:CDS
GTAGGTATTTATGCAACACT+TGG 0.560031 3_1:-69834264 Msa0371610:CDS
ATCAGATAAAGATGCAACAC+AGG 0.561391 3_1:-69837311 Msa0371610:CDS
AACCCAAACATATATGACAT+TGG 0.565039 3_1:-69834745 Msa0371610:CDS
TTATGACTTTGCTGGAAGAG+TGG 0.569942 3_1:-69837167 Msa0371610:CDS
ACAGATGCTACTAATGTTGG+AGG 0.570054 3_1:-69834115 Msa0371610:CDS
CAATTTGAGACCATACCTGA+TGG 0.571463 3_1:-69837343 Msa0371610:CDS
TATTGTGGTTCTTGTTGACA+AGG 0.574072 3_1:-69833845 Msa0371610:three_prime_UTR
CAACACTTGGAAAATAGGGA+TGG 0.580082 3_1:-69834251 Msa0371610:CDS
AACACATTTGAAGAATTGGA+AGG 0.580993 3_1:-69834796 Msa0371610:CDS
TGCCTACCAAGCATGTGAAG+TGG 0.583854 3_1:+69834721 None:intergenic
TTAATCACGAGCTCTTTGAA+AGG 0.592339 3_1:+69837244 None:intergenic
ACAGGATGTTCTAACGTTGT+GGG 0.594620 3_1:-69837293 Msa0371610:CDS
AATGGTACTAATACAACATG+TGG 0.596910 3_1:+69837517 None:intergenic
GTCCACTTCACATGCTTGGT+AGG 0.602957 3_1:-69834723 Msa0371610:CDS
GGAGGGTTCCTGACTCATTG+TGG 0.605368 3_1:-69834367 Msa0371610:CDS
TTAACATATAGGACTGAGCA+AGG 0.608706 3_1:+69834607 None:intergenic
TGAGACAAAACTGCTTGGAG+TGG 0.611958 3_1:-69834150 Msa0371610:CDS
GTATGGACAGGAAAATATTG+TGG 0.616787 3_1:-69833860 Msa0371610:three_prime_UTR
CTGACATAGAATGCATAACA+TGG 0.624105 3_1:-69834645 Msa0371610:CDS
ACTTCATCTAGAAAATCTTG+TGG 0.626314 3_1:+69834454 None:intergenic
TTAGTACCATTTCCAGCACA+AGG 0.640576 3_1:-69837505 Msa0371610:CDS
CAATCAAATGAGCAATCCAA+AGG 0.640979 3_1:+69833780 None:intergenic
CTTGTGATGGAAATGATGGA+AGG 0.651161 3_1:-69834190 Msa0371610:CDS
CACTTGAAAGAATTTGCATG+GGG 0.652156 3_1:-69834553 Msa0371610:CDS
GTTGAATTCAGTGTTCACAA+AGG 0.652579 3_1:+69837423 None:intergenic
TGTGGAAACCATTACAACGT+AGG 0.697450 3_1:+69837449 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATATATTATAAAT+AGG + chr3_1:69834356-69834375 None:intergenic 0.0%
!!! TTTATAATATATTTTTTTTT+AGG - chr3_1:69834357-69834376 Msa0371610:CDS 0.0%
!!! AAATATAAATAAATTATTTT+TGG + chr3_1:69834838-69834857 None:intergenic 0.0%
!!! TTTTTCATGTTTTAATATAT+TGG + chr3_1:69835402-69835421 None:intergenic 10.0%
!! ATACTAAAATAAAGAAATAA+AGG + chr3_1:69835941-69835960 None:intergenic 10.0%
!! AAACATAGAGAAAAAAAAAT+CGG + chr3_1:69834288-69834307 None:intergenic 15.0%
!!! ATTATTTTTGGAACATTTTT+AGG + chr3_1:69834826-69834845 None:intergenic 15.0%
!!! TTTGAACTACTTTTTTTTTA+AGG + chr3_1:69834998-69835017 None:intergenic 15.0%
!! AAAAAAAAAGTAGTTCAAAT+CGG - chr3_1:69834999-69835018 Msa0371610:intron 15.0%
!! TTATACATTCATAAAATTCA+TGG - chr3_1:69835042-69835061 Msa0371610:intron 15.0%
!!! ACTTATTTTATGTAGAATTA+TGG + chr3_1:69835235-69835254 None:intergenic 15.0%
!!! ATTAGATGAAAATTTTATTG+CGG - chr3_1:69836328-69836347 Msa0371610:intron 15.0%
!! TGAAAATTATGAAGAAAAAA+AGG + chr3_1:69837425-69837444 None:intergenic 15.0%
!! CACAGAAAAACAAATTAAAA+TGG - chr3_1:69833760-69833779 Msa0371610:three_prime_UTR 20.0%
!! TTAATTATAATAGTCATCAG+TGG + chr3_1:69834541-69834560 None:intergenic 20.0%
!!! AAAATTCTTCTAAAGAGTAT+TGG - chr3_1:69834778-69834797 Msa0371610:CDS 20.0%
!! TTAATGCGATATGAATATTT+AGG - chr3_1:69835909-69835928 Msa0371610:intron 20.0%
!! AAATTAACCATGATGTTAAA+AGG - chr3_1:69837080-69837099 Msa0371610:CDS 20.0%
!! AATTAACCATGATGTTAAAA+GGG - chr3_1:69837081-69837100 Msa0371610:CDS 20.0%
!!! GAAATGTAATAGATTTGTTT+TGG - chr3_1:69837556-69837575 Msa0371610:five_prime_UTR 20.0%
! AGAAAGAAATACAAAGATTG+AGG - chr3_1:69834406-69834425 Msa0371610:CDS 25.0%
! GAAAGAAATACAAAGATTGA+GGG - chr3_1:69834407-69834426 Msa0371610:CDS 25.0%
! TAAATGGTGAGCTAATAAAT+GGG - chr3_1:69834925-69834944 Msa0371610:CDS 25.0%
!! GATGTAATGTTTAATTTCCA+AGG - chr3_1:69836446-69836465 Msa0371610:intron 25.0%
! AATCAACACATTTGAAGAAT+TGG - chr3_1:69836508-69836527 Msa0371610:intron 25.0%
! TCAGTCCTATATGTTAATTA+TGG - chr3_1:69836707-69836726 Msa0371610:intron 25.0%
! CACTTCCATAATTAACATAT+AGG + chr3_1:69836715-69836734 None:intergenic 25.0%
!!! ATAGTAAGTTACCGTTTTTA+TGG - chr3_1:69836786-69836805 Msa0371610:intron 25.0%
!! AGATTTTCTAGATGAAGTTA+AGG - chr3_1:69836859-69836878 Msa0371610:intron 25.0%
!!! CATGTTGACTATTTTGAATT+TGG - chr3_1:69837366-69837385 Msa0371610:CDS 25.0%
!! CTTCATAATTTTCAACTGTA+TGG - chr3_1:69837431-69837450 Msa0371610:CDS 25.0%
! TATCTTTGAATATGTTCCTT+TGG - chr3_1:69837512-69837531 Msa0371610:CDS 25.0%
!! ATTTGTTTTTCTGTGAGAGT+GGG + chr3_1:69833755-69833774 None:intergenic 30.0%
!! AATTTGTTTTTCTGTGAGAG+TGG + chr3_1:69833756-69833775 None:intergenic 30.0%
AATGGTACTAATACAACATG+TGG + chr3_1:69833794-69833813 None:intergenic 30.0%
ATGGTCTCAAATTGAAAATC+AGG + chr3_1:69833959-69833978 None:intergenic 30.0%
ATACAAGTAACTGGAATATG+AGG + chr3_1:69834106-69834125 None:intergenic 30.0%
TCAGCAATTATACAAGTAAC+TGG + chr3_1:69834115-69834134 None:intergenic 30.0%
GTTACTTGTATAATTGCTGA+TGG - chr3_1:69834115-69834134 Msa0371610:CDS 30.0%
! CGGTTTAATTTACCTTTGAA+TGG + chr3_1:69834268-69834287 None:intergenic 30.0%
TTCACACCCTTATTAGTAAA+TGG - chr3_1:69834909-69834928 Msa0371610:CDS 30.0%
AGCTCACCATTTACTAATAA+GGG + chr3_1:69834918-69834937 None:intergenic 30.0%
TAGCTCACCATTTACTAATA+AGG + chr3_1:69834919-69834938 None:intergenic 30.0%
GTAAATGGTGAGCTAATAAA+TGG - chr3_1:69834924-69834943 Msa0371610:CDS 30.0%
GATTTAGAAGATATGTTCTG+TGG + chr3_1:69835575-69835594 None:intergenic 30.0%
! AGTTTAGTTTAGCTACTTCT+TGG + chr3_1:69835597-69835616 None:intergenic 30.0%
AAGAAACTAGGTTATACGAA+CGG + chr3_1:69836031-69836050 None:intergenic 30.0%
AAATGTACACTACCACAAAT+TGG + chr3_1:69836063-69836082 None:intergenic 30.0%
! GATGAAAATTTTATTGCGGA+TGG - chr3_1:69836332-69836351 Msa0371610:intron 30.0%
! CTTTGGAAACAAGTTTAGAT+TGG - chr3_1:69836357-69836376 Msa0371610:intron 30.0%
AACAAGTTTAGATTGGATCT+CGG - chr3_1:69836364-69836383 Msa0371610:intron 30.0%
!!! AATTTTGTGCTTTAGAACCT+TGG + chr3_1:69836466-69836485 None:intergenic 30.0%
AACACATTTGAAGAATTGGA+AGG - chr3_1:69836512-69836531 Msa0371610:intron 30.0%
!! GTCATATATGTTTGGGTTTT+TGG + chr3_1:69836561-69836580 None:intergenic 30.0%
AACCCAAACATATATGACAT+TGG - chr3_1:69836563-69836582 Msa0371610:intron 30.0%
GACCAATGTCATATATGTTT+GGG + chr3_1:69836568-69836587 None:intergenic 30.0%
!! TACCGTTTTTATGGATAATG+AGG - chr3_1:69836795-69836814 Msa0371610:intron 30.0%
ACTTCATCTAGAAAATCTTG+TGG + chr3_1:69836857-69836876 None:intergenic 30.0%
ATAGAGGATACATAACTAGT+TGG - chr3_1:69836882-69836901 Msa0371610:intron 30.0%
TTATGCAACACTTGGAAAAT+AGG - chr3_1:69837052-69837071 Msa0371610:intron 30.0%
TATGCAACACTTGGAAAATA+GGG - chr3_1:69837053-69837072 Msa0371610:intron 30.0%
! TAATTTTCAACTGTATGGAC+AGG - chr3_1:69837436-69837455 Msa0371610:CDS 30.0%
GATTGCTCATTTGATTGATT+TGG - chr3_1:69837534-69837553 Msa0371610:exon 30.0%
! CTAATACAACATGTGGCTTT+TGG + chr3_1:69833787-69833806 None:intergenic 35.0%
GTTGAATTCAGTGTTCACAA+AGG + chr3_1:69833888-69833907 None:intergenic 35.0%
TGAATTCAACCACAAACGTT+TGG - chr3_1:69833898-69833917 Msa0371610:three_prime_UTR 35.0%
AAACGTTTGGTAAAGTCTCT+TGG - chr3_1:69833911-69833930 Msa0371610:three_prime_UTR 35.0%
GTTGCATCTTTATCTGATTC+TGG + chr3_1:69833995-69834014 None:intergenic 35.0%
ATCAGATAAAGATGCAACAC+AGG - chr3_1:69833997-69834016 Msa0371610:three_prime_UTR 35.0%
TTAATCACGAGCTCTTTGAA+AGG + chr3_1:69834067-69834086 None:intergenic 35.0%
AGAGGAATTCTTCCATTCAA+AGG - chr3_1:69834253-69834272 Msa0371610:CDS 35.0%
!! ATTCTCGTTTGAGTTTTCCT+GGG + chr3_1:69834446-69834465 None:intergenic 35.0%
!! TATTCTCGTTTGAGTTTTCC+TGG + chr3_1:69834447-69834466 None:intergenic 35.0%
CTAATAAATGGGATAGACAC+TGG - chr3_1:69834936-69834955 Msa0371610:CDS 35.0%
!! GAACTACTTGTTGACTCATT+TGG + chr3_1:69834968-69834987 None:intergenic 35.0%
AGTTCAAATCGGATTCTTTG+TGG - chr3_1:69835010-69835029 Msa0371610:intron 35.0%
! TCTTTTGTCTTAACCCCTTT+CGG - chr3_1:69835182-69835201 Msa0371610:intron 35.0%
ATTCTTCTACAAACCGAAAG+GGG + chr3_1:69835198-69835217 None:intergenic 35.0%
CATTCTTCTACAAACCGAAA+GGG + chr3_1:69835199-69835218 None:intergenic 35.0%
ACATTCTTCTACAAACCGAA+AGG + chr3_1:69835200-69835219 None:intergenic 35.0%
! TTTCGGTTTGTAGAAGAATG+TGG - chr3_1:69835199-69835218 Msa0371610:intron 35.0%
! CTACATTTTTGTTGGTACCT+TGG + chr3_1:69835549-69835568 None:intergenic 35.0%
AGGTACCAACAAAAATGTAG+TGG - chr3_1:69835549-69835568 Msa0371610:intron 35.0%
TGAAAATGACATTAGCACAG+AGG - chr3_1:69835684-69835703 Msa0371610:intron 35.0%
!!! TTCTATTTTTGGCGCTTGAT+AGG - chr3_1:69835991-69836010 Msa0371610:intron 35.0%
!! TGGCTCTAACAAAAGAAACT+AGG + chr3_1:69836043-69836062 None:intergenic 35.0%
! CTTTTGTTAGAGCCAATTTG+TGG - chr3_1:69836048-69836067 Msa0371610:intron 35.0%
TTAAAAACTATCCACGCTGA+CGG + chr3_1:69836143-69836162 None:intergenic 35.0%
ACAAGTTTAGATTGGATCTC+GGG - chr3_1:69836365-69836384 Msa0371610:intron 35.0%
TGATTCTTATGAAGCTTGGA+AGG + chr3_1:69836415-69836434 None:intergenic 35.0%
TCTGTGATTCTTATGAAGCT+TGG + chr3_1:69836419-69836438 None:intergenic 35.0%
GGACCAATGTCATATATGTT+TGG + chr3_1:69836569-69836588 None:intergenic 35.0%
!! TGAGATGGAACATGGTTTTA+CGG - chr3_1:69836616-69836635 Msa0371610:intron 35.0%
CTGACATAGAATGCATAACA+TGG - chr3_1:69836663-69836682 Msa0371610:intron 35.0%
GCATAACATGGTTGAATAGA+TGG - chr3_1:69836675-69836694 Msa0371610:intron 35.0%
TTAACATATAGGACTGAGCA+AGG + chr3_1:69836704-69836723 None:intergenic 35.0%
ACCACTTGAAAGAATTTGCA+TGG - chr3_1:69836753-69836772 Msa0371610:intron 35.0%
CCACTTGAAAGAATTTGCAT+GGG - chr3_1:69836754-69836773 Msa0371610:intron 35.0%
CACTTGAAAGAATTTGCATG+GGG - chr3_1:69836755-69836774 Msa0371610:intron 35.0%
GGCCTCATTATCCATAAAAA+CGG + chr3_1:69836800-69836819 None:intergenic 35.0%
CTAGATGAAGTTAAGGATAG+AGG - chr3_1:69836866-69836885 Msa0371610:intron 35.0%
ACACTTGAAACTATTTCAGC+AGG - chr3_1:69836974-69836993 Msa0371610:intron 35.0%
AAGAAAGGCCAACAAATAGT+AGG + chr3_1:69837004-69837023 None:intergenic 35.0%
!! ACTATTTGTTGGCCTTTCTT+TGG - chr3_1:69837004-69837023 Msa0371610:intron 35.0%
GTGAGCAACAAACAAATTGT+AGG - chr3_1:69837026-69837045 Msa0371610:intron 35.0%
GTAGGTATTTATGCAACACT+TGG - chr3_1:69837044-69837063 Msa0371610:intron 35.0%
! TCTCTTCCCTTTTAACATCA+TGG + chr3_1:69837090-69837109 None:intergenic 35.0%
AGAGATAACCAAACTTGTGA+TGG - chr3_1:69837105-69837124 Msa0371610:CDS 35.0%
CATCATTTCCATCACAAGTT+TGG + chr3_1:69837116-69837135 None:intergenic 35.0%
! CAAACTTGTGATGGAAATGA+TGG - chr3_1:69837114-69837133 Msa0371610:CDS 35.0%
! GAAATGATGGAAGGAGAAAA+AGG - chr3_1:69837127-69837146 Msa0371610:CDS 35.0%
GTCAACATGACAATGATTGA+TGG + chr3_1:69837355-69837374 None:intergenic 35.0%
GTATGGACAGGAAAATATTG+TGG - chr3_1:69837448-69837467 Msa0371610:CDS 35.0%
TATTGTGGTTCTTGTTGACA+AGG - chr3_1:69837463-69837482 Msa0371610:CDS 35.0%
CAATCAAATGAGCAATCCAA+AGG + chr3_1:69837531-69837550 None:intergenic 35.0%
TTAGTACCATTTCCAGCACA+AGG - chr3_1:69833803-69833822 Msa0371610:three_prime_UTR 40.0%
! GTTTGGCTAGTTGCATGAAA+GGG + chr3_1:69833838-69833857 None:intergenic 40.0%
! AGTTTGGCTAGTTGCATGAA+AGG + chr3_1:69833839-69833858 None:intergenic 40.0%
ACCATTACAACGTAGGAGTT+TGG + chr3_1:69833855-69833874 None:intergenic 40.0%
TGTGGAAACCATTACAACGT+AGG + chr3_1:69833862-69833881 None:intergenic 40.0%
CAGTGTTCACAAAGGTTATG+TGG + chr3_1:69833880-69833899 None:intergenic 40.0%
GAGACTTTACCAAACGTTTG+TGG + chr3_1:69833910-69833929 None:intergenic 40.0%
! TCTTGGAGCTGACTTTGTTA+AGG - chr3_1:69833928-69833947 Msa0371610:three_prime_UTR 40.0%
! CTTGGAGCTGACTTTGTTAA+GGG - chr3_1:69833929-69833948 Msa0371610:three_prime_UTR 40.0%
! CAATTTGAGACCATACCTGA+TGG - chr3_1:69833965-69833984 Msa0371610:three_prime_UTR 40.0%
TTCTGGTAAACCATCAGGTA+TGG + chr3_1:69833978-69833997 None:intergenic 40.0%
TCTGATTCTGGTAAACCATC+AGG + chr3_1:69833983-69834002 None:intergenic 40.0%
ACAGGATGTTCTAACGTTGT+GGG - chr3_1:69834015-69834034 Msa0371610:three_prime_UTR 40.0%
GATGGCAATTATGACTTTGC+TGG - chr3_1:69834133-69834152 Msa0371610:CDS 40.0%
TTATGACTTTGCTGGAAGAG+TGG - chr3_1:69834141-69834160 Msa0371610:CDS 40.0%
AAGTAGAAGCAGTCCAAAGT+TGG + chr3_1:69834192-69834211 None:intergenic 40.0%
TTTGGACTGCTTCTACTTGT+GGG - chr3_1:69834194-69834213 Msa0371610:CDS 40.0%
TGTGGGATATTTGCAATTCG+AGG - chr3_1:69834219-69834238 Msa0371610:CDS 40.0%
AACGAGAATACAACGTATCG+TGG - chr3_1:69834457-69834476 Msa0371610:CDS 40.0%
!! AGTGTTATGTCTCTAGGACA+CGG + chr3_1:69835484-69835503 None:intergenic 40.0%
CCTAGAGACATAACACTTGA+CGG - chr3_1:69835487-69835506 Msa0371610:intron 40.0%
GCAAGTGACAACTATGTCTA+GGG + chr3_1:69835527-69835546 None:intergenic 40.0%
! TGTGGCCACTACATTTTTGT+TGG + chr3_1:69835557-69835576 None:intergenic 40.0%
TTGCTCACATACTTCTCCAT+CGG - chr3_1:69835618-69835637 Msa0371610:intron 40.0%
CAACGTTATGATTCATCCGA+TGG + chr3_1:69835637-69835656 None:intergenic 40.0%
! TTTTATTGCGGATGGCACTT+TGG - chr3_1:69836340-69836359 Msa0371610:intron 40.0%
GTAAAACCATGTTCCATCTC+AGG + chr3_1:69836617-69836636 None:intergenic 40.0%
CCCATGCAAATTCTTTCAAG+TGG + chr3_1:69836757-69836776 None:intergenic 40.0%
AATGAGGCCAGATGTAGTAA+TGG - chr3_1:69836811-69836830 Msa0371610:intron 40.0%
ATGAGGCCAGATGTAGTAAT+GGG - chr3_1:69836812-69836831 Msa0371610:intron 40.0%
TCTTCACCCATTACTACATC+TGG + chr3_1:69836821-69836840 None:intergenic 40.0%
! CTGATGGATGATCAAGAACT+TGG + chr3_1:69836919-69836938 None:intergenic 40.0%
GTTCTTGATCATCCATCAGT+TGG - chr3_1:69836920-69836939 Msa0371610:intron 40.0%
TTGATCATCCATCAGTTGGA+GGG - chr3_1:69836924-69836943 Msa0371610:intron 40.0%
AATTCCAACCACAATGAGTC+AGG + chr3_1:69836952-69836971 None:intergenic 40.0%
! GTTTGTTGCTCACCAAAGAA+AGG + chr3_1:69837019-69837038 None:intergenic 40.0%
CAACACTTGGAAAATAGGGA+TGG - chr3_1:69837057-69837076 Msa0371610:CDS 40.0%
! CTTGTGATGGAAATGATGGA+AGG - chr3_1:69837118-69837137 Msa0371610:CDS 40.0%
AGAGATGAGACAAAACTGCT+TGG - chr3_1:69837153-69837172 Msa0371610:CDS 40.0%
GCTACAGATGCTACTAATGT+TGG - chr3_1:69837190-69837209 Msa0371610:CDS 40.0%
ACAGATGCTACTAATGTTGG+AGG - chr3_1:69837193-69837212 Msa0371610:CDS 40.0%
ACATGACCTTGTGCTGGAAA+TGG + chr3_1:69833812-69833831 None:intergenic 45.0%
GCCAAACTCCTACGTTGTAA+TGG - chr3_1:69833851-69833870 Msa0371610:three_prime_UTR 45.0%
CACAGGATGTTCTAACGTTG+TGG - chr3_1:69834014-69834033 Msa0371610:three_prime_UTR 45.0%
TGGAAGAGTGGCTAAGGATT+TGG - chr3_1:69834153-69834172 Msa0371610:CDS 45.0%
GGAAGAGTGGCTAAGGATTT+GGG - chr3_1:69834154-69834173 Msa0371610:CDS 45.0%
GCATTCGAGAGATCCAACTT+TGG - chr3_1:69834176-69834195 Msa0371610:CDS 45.0%
CTTTGGACTGCTTCTACTTG+TGG - chr3_1:69834193-69834212 Msa0371610:CDS 45.0%
TGCTTCTACTTGTGGGTTTG+TGG - chr3_1:69834201-69834220 Msa0371610:CDS 45.0%
GCTTCTACTTGTGGGTTTGT+GGG - chr3_1:69834202-69834221 Msa0371610:CDS 45.0%
TTCGAGGAGCTTGTCAAAAG+AGG - chr3_1:69834235-69834254 Msa0371610:CDS 45.0%
TTCATGGTCATTGAGTCGCA+CGG - chr3_1:69835058-69835077 Msa0371610:intron 45.0%
CCGTCAAGTGTTATGTCTCT+AGG + chr3_1:69835490-69835509 None:intergenic 45.0%
! CTATGTCTAGGGTCCATGAT+TGG + chr3_1:69835516-69835535 None:intergenic 45.0%
GGCAAGTGACAACTATGTCT+AGG + chr3_1:69835528-69835547 None:intergenic 45.0%
! GACATAGTTGTCACTTGCCA+AGG - chr3_1:69835529-69835548 Msa0371610:intron 45.0%
! TGAAGCACTTGACACCCTTA+GGG - chr3_1:69836535-69836554 Msa0371610:intron 45.0%
!!! GTTTGGGTTTTTGGCCCTAA+GGG + chr3_1:69836552-69836571 None:intergenic 45.0%
!!! TGTTTGGGTTTTTGGCCCTA+AGG + chr3_1:69836553-69836572 None:intergenic 45.0%
ATTGGTCCACTTCACATGCT+TGG - chr3_1:69836581-69836600 Msa0371610:intron 45.0%
CACTTTCCTGAGATGGAACA+TGG - chr3_1:69836608-69836627 Msa0371610:intron 45.0%
!! GAACATGGTTTTACGGCAAG+TGG - chr3_1:69836623-69836642 Msa0371610:intron 45.0%
CTTGATCATCCATCAGTTGG+AGG - chr3_1:69836923-69836942 Msa0371610:intron 45.0%
CAGGTGTGCCTACTATTTGT+TGG - chr3_1:69836993-69837012 Msa0371610:intron 45.0%
TGAGACAAAACTGCTTGGAG+TGG - chr3_1:69837158-69837177 Msa0371610:CDS 45.0%
!!! TCTAAATAATTATTTTTTAT+TGG - chr3_1:69835300-69835319 Msa0371610:intron 5.0%
!!! AAAAATATATATTCTATTTT+TGG - chr3_1:69835980-69835999 Msa0371610:intron 5.0%
CTTTGCTGGAAGAGTGGCTA+AGG - chr3_1:69834147-69834166 Msa0371610:CDS 50.0%
!! CGTTTGAGTTTTCCTGGGTC+AGG + chr3_1:69834441-69834460 None:intergenic 50.0%
! CACTTGACGGATGCCAATCA+TGG - chr3_1:69835500-69835519 Msa0371610:intron 50.0%
ATTTGCATACACCGTCAGCG+TGG - chr3_1:69836129-69836148 Msa0371610:intron 50.0%
! GTGAAGCACTTGACACCCTT+AGG - chr3_1:69836534-69836553 Msa0371610:intron 50.0%
GTCCACTTCACATGCTTGGT+AGG - chr3_1:69836585-69836604 Msa0371610:intron 50.0%
TGCCTACCAAGCATGTGAAG+TGG + chr3_1:69836590-69836609 None:intergenic 50.0%
TGGTAGGCACTTTCCTGAGA+TGG - chr3_1:69836601-69836620 Msa0371610:intron 50.0%
! CGGCAAGTGGTTCGAGTTTA+TGG - chr3_1:69836636-69836655 Msa0371610:intron 50.0%
GGTTCCTGACTCATTGTGGT+TGG - chr3_1:69836945-69836964 Msa0371610:intron 50.0%
GGGTTCACATGACCTTGTGC+TGG + chr3_1:69833818-69833837 None:intergenic 55.0%
AGGGACATGATACCTGACCC+AGG - chr3_1:69834426-69834445 Msa0371610:CDS 55.0%
GTCAGGAACCCTCCAACTGA+TGG + chr3_1:69836935-69836954 None:intergenic 55.0%
GGAGGGTTCCTGACTCATTG+TGG - chr3_1:69836941-69836960 Msa0371610:intron 55.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 69833733 69837597 69833733 ID=Msa0371610;Name=Msa0371610
chr3_1 mRNA 69833733 69837597 69833733 ID=Msa0371610-mRNA-1;Parent=Msa0371610;Name=Msa0371610-mRNA-1;_AED=0.01;_eAED=0.01;_QI=46|1|1|1|1|1|2|309|483
chr3_1 exon 69833733 69834997 69833733 ID=Msa0371610-mRNA-1:exon:14981;Parent=Msa0371610-mRNA-1
chr3_1 exon 69837056 69837597 69837056 ID=Msa0371610-mRNA-1:exon:14980;Parent=Msa0371610-mRNA-1
chr3_1 five_prime_UTR 69837552 69837597 69837552 ID=Msa0371610-mRNA-1:five_prime_utr;Parent=Msa0371610-mRNA-1
chr3_1 CDS 69837056 69837551 69837056 ID=Msa0371610-mRNA-1:cds;Parent=Msa0371610-mRNA-1
chr3_1 CDS 69834042 69834997 69834042 ID=Msa0371610-mRNA-1:cds;Parent=Msa0371610-mRNA-1
chr3_1 three_prime_UTR 69833733 69834041 69833733 ID=Msa0371610-mRNA-1:three_prime_utr;Parent=Msa0371610-mRNA-1
Gene Sequence

>Msa0371610

ATGGACCAAAAGCCACATGTTGTATTAGTACCATTTCCAGCACAAGGTCATGTGAACCCTTTCATGCAACTAGCCAAACTCCTACGTTGTAATGGTTTCCACATAACCTTTGTGAACACTGAATTCAACCACAAACGTTTGGTAAAGTCTCTTGGAGCTGACTTTGTTAAGGGTCTACCTGATTTTCAATTTGAGACCATACCTGATGGTTTACCAGAATCAGATAAAGATGCAACACAGGATGTTCTAACGTTGTGGGATGCAACTAGAAATTTTTTTTATGCTCCTTTCAAAGAGCTCGTGATTAAGCTCAACACTTCATCACCTCATATTCCAGTTACTTGTATAATTGCTGATGGCAATTATGACTTTGCTGGAAGAGTGGCTAAGGATTTGGGCATTCGAGAGATCCAACTTTGGACTGCTTCTACTTGTGGGTTTGTGGGATATTTGCAATTCGAGGAGCTTGTCAAAAGAGGAATTCTTCCATTCAAAGATGAAAATTTTATTGCGGATGGCACTTTGGAAACAAGTTTAGATTGGATCTCGGGAATGAAAGATATTAGACTAAAAGACCTTCCAAGCTTCATAAGAATCACAGATCTTAATGATGTAATGTTTAATTTCCAAGGTTCTAAAGCACAAAATTGTTTAAGATCATCAATGATTATAATCAACACATTTGAAGAATTGGAAGGTGAAGCACTTGACACCCTTAGGGCCAAAAACCCAAACATATATGACATTGGTCCACTTCACATGCTTGGTAGGCACTTTCCTGAGATGGAACATGGTTTTACGGCAAGTGGTTCGAGTTTATGGAAATCTGACATAGAATGCATAACATGGTTGAATAGATGGAAACCTTGCTCAGTCCTATATGTTAATTATGGAAGTGTAACTGTTATGACTGATCACCACTTGAAAGAATTTGCATGGGGAATAGCAAATAGTAAGTTACCGTTTTTATGGATAATGAGGCCAGATGTAGTAATGGGTGAAGAAACTTCATCTTTGCCACAAGATTTTCTAGATGAAGTTAAGGATAGAGGATACATAACTAGTTGGTGCATGCAAGACCAAGTTCTTGATCATCCATCAGTTGGAGGGTTCCTGACTCATTGTGGTTGGAATTCTACACTTGAAACTATTTCAGCAGGTGTGCCTACTATTTGTTGGCCTTTCTTTGGTGAGCAACAAACAAATTGTAGGTATTTATGCAACACTTGGAAAATAGGGATGGAAATTAACCATGATGTTAAAAGGGAAGAGATAACCAAACTTGTGATGGAAATGATGGAAGGAGAAAAAGGAAAAGAGATGAGACAAAACTGCTTGGAGTGGAAGAAGAAAGCTACAGATGCTACTAATGTTGGAGGATCATCATACAATAATTTCTATAATTTAATTAAAGAGCTTCTTCATCACAATGCTATTTCAGTTATATTATAA
Protein sequence

>Msa0371610

MDQKPHVVLVPFPAQGHVNPFMQLAKLLRCNGFHITFVNTEFNHKRLVKSLGADFVKGLPDFQFETIPDGLPESDKDATQDVLTLWDATRNFFYAPFKELVIKLNTSSPHIPVTCIIADGNYDFAGRVAKDLGIREIQLWTASTCGFVGYLQFEELVKRGILPFKDENFIADGTLETSLDWISGMKDIRLKDLPSFIRITDLNDVMFNFQGSKAQNCLRSSMIIINTFEELEGEALDTLRAKNPNIYDIGPLHMLGRHFPEMEHGFTASGSSLWKSDIECITWLNRWKPCSVLYVNYGSVTVMTDHHLKEFAWGIANSKLPFLWIMRPDVVMGEETSSLPQDFLDEVKDRGYITSWCMQDQVLDHPSVGGFLTHCGWNSTLETISAGVPTICWPFFGEQQTNCRYLCNTWKIGMEINHDVKREEITKLVMEMMEGEKGKEMRQNCLEWKKKATDATNVGGSSYNNFYNLIKELLHHNAISVIL*