AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0903730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0903730 MtrunA17_Chr6g0452181 92.222 180 6 1 1 180 1 172 4.98e-113 330
Msa0903730 MtrunA17_Chr1g0205121 54.762 84 36 1 53 136 81 162 1.75e-20 89.4
Msa0903730 MtrunA17_Chr5g0394901 42.017 119 62 2 23 136 48 164 1.93e-20 89.4
Msa0903730 MtrunA17_Chr6g0479511 54.054 74 31 2 65 137 47 118 5.99e-20 87.0
Msa0903730 MtrunA17_Chr7g0260081 59.722 72 27 1 65 136 93 162 3.07e-19 85.5
Msa0903730 MtrunA17_Chr1g0185281 57.333 75 30 1 62 136 90 162 7.42e-19 84.7
Msa0903730 MtrunA17_Chr6g0466801 51.948 77 35 1 59 135 93 167 1.06e-18 84.3
Msa0903730 MtrunA17_Chr1g0201271 47.115 104 51 3 34 135 70 171 2.44e-18 83.2
Msa0903730 MtrunA17_Chr7g0263111 41.880 117 43 3 64 180 89 180 3.23e-18 82.4
Msa0903730 MtrunA17_Chr5g0400311 43.210 81 44 1 59 139 101 179 2.11e-17 80.5
Msa0903730 MtrunA17_Chr8g0355021 32.857 140 90 2 1 140 1 136 6.96e-17 78.6
Msa0903730 MtrunA17_Chr8g0375751 35.484 155 72 6 62 215 58 185 9.22e-17 78.2
Msa0903730 MtrunA17_Chr1g0165011 31.073 177 111 5 45 212 45 219 1.57e-16 77.8
Msa0903730 MtrunA17_Chr8g0382571 52.778 72 32 1 64 135 39 108 4.12e-16 76.6
Msa0903730 MtrunA17_Chr4g0054941 41.667 96 52 3 59 153 68 160 5.09e-16 76.3
Msa0903730 MtrunA17_Chr4g0054951 41.975 81 45 1 59 139 71 149 1.15e-15 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0903730 AT1G05470.2 59.494 79 30 1 59 137 87 163 2.01e-21 92.4
Msa0903730 AT1G05470.1 59.494 79 30 1 59 137 87 163 2.01e-21 92.4
Msa0903730 AT2G32010.2 64.789 71 23 1 66 136 93 161 2.79e-21 92.0
Msa0903730 AT2G32010.1 64.789 71 23 1 66 136 93 161 2.79e-21 92.0
Msa0903730 AT2G32010.4 64.789 71 23 1 66 136 93 161 2.79e-21 92.0
Msa0903730 AT2G32010.3 64.789 71 23 1 66 136 93 161 2.79e-21 92.0
Msa0903730 AT3G63240.2 38.095 147 78 4 37 179 63 200 3.71e-19 85.9
Msa0903730 AT3G63240.1 38.095 147 78 4 37 179 63 200 3.71e-19 85.9
Msa0903730 AT2G37440.1 43.651 126 57 4 64 180 83 203 8.29e-19 84.7
Msa0903730 AT2G37440.3 43.651 126 57 4 64 180 83 203 8.29e-19 84.7
Msa0903730 AT1G34120.4 51.948 77 35 1 59 135 96 170 3.38e-17 80.1
Msa0903730 AT1G34120.1 51.948 77 35 1 59 135 96 170 4.01e-17 80.1
Msa0903730 AT1G34120.3 51.948 77 35 1 59 135 100 174 4.38e-17 79.7
Msa0903730 AT1G34120.2 51.948 77 35 1 59 135 100 174 4.38e-17 79.7
Msa0903730 AT1G71710.1 46.753 77 39 1 59 135 123 197 1.31e-16 78.6
Msa0903730 AT1G71710.2 46.753 77 39 1 59 135 114 188 1.39e-16 78.6
Msa0903730 AT4G18010.1 44.156 77 41 1 59 135 106 180 2.01e-16 77.8
Msa0903730 AT4G18010.2 44.156 77 41 1 59 135 106 180 2.13e-16 77.8
Msa0903730 AT2G37440.2 37.584 149 61 5 66 195 1 136 1.16e-14 72.4
Msa0903730 AT2G01900.3 35.897 117 60 4 65 180 67 169 7.57e-14 70.1
Msa0903730 AT2G01900.1 35.897 117 60 4 65 180 59 161 8.04e-14 70.1
Msa0903730 AT2G01900.2 35.897 117 60 4 65 180 59 161 8.51e-14 70.1
Msa0903730 AT5G65090.2 45.205 73 38 1 63 135 9 79 8.68e-14 70.1
Msa0903730 AT5G65090.3 45.205 73 38 1 63 135 72 142 1.06e-13 70.1
Msa0903730 AT5G65090.1 45.205 73 38 1 63 135 72 142 1.06e-13 70.1
Msa0903730 AT5G04980.1 47.761 67 33 1 64 130 9 73 4.84e-12 65.1
Msa0903730 AT5G04980.3 47.761 67 33 1 64 130 9 73 4.84e-12 65.1
Msa0903730 AT5G04980.2 47.761 67 33 1 64 130 38 102 4.86e-12 65.1

Find 97 sgRNAs with CRISPR-Local

Find 924 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCATGACTTATAAGATTT+TGG 0.148800 6_2:+1115858 None:intergenic
TTGAAGACCTCAACAGTAAT+AGG 0.217504 6_2:-1114330 Msa0903730:CDS
GTTGTAGCACATTTAGCTTC+TGG 0.239187 6_2:-1113954 Msa0903730:three_prime_UTR
CATTTCCACAAGTTCTTTGC+TGG 0.241196 6_2:+1109174 None:intergenic
TAAGATTTGACTGTAGAATT+TGG 0.253750 6_2:-1108588 Msa0903730:three_prime_UTR
ACCTATTGCCCTTAGGATAC+TGG 0.275359 6_2:-1108939 Msa0903730:intron
CACTTCTTCTTGTTTCTATA+AGG 0.279840 6_2:-1116052 Msa0903730:five_prime_UTR
TGTGGTGTTATGGGATATTT+AGG 0.280551 6_2:-1114032 Msa0903730:CDS
TTCAGTTGCATGTGGTGTTA+TGG 0.281058 6_2:-1114042 Msa0903730:CDS
ACAAATTGGAACAATCTTAT+AGG 0.311233 6_2:-1114285 Msa0903730:CDS
TATGTAACAGTCGCATATTT+TGG 0.312136 6_2:-1110254 Msa0903730:intron
TTCTTTCTTGTCATAGATAT+TGG 0.312976 6_2:-1115940 Msa0903730:five_prime_UTR
ATCCATCAGTGGCAACAAAT+TGG 0.315420 6_2:-1114299 Msa0903730:CDS
CAAGAAGAAGTGACAAAATA+AGG 0.315451 6_2:+1116063 None:intergenic
GCAAAACCCTAAGAAAATTA+AGG 0.329760 6_2:-1108913 Msa0903730:three_prime_UTR
TCATGGCCTAAGATTGTTAG+AGG 0.356206 6_2:+1113843 None:intergenic
CATCATCCTCTAACAATCTT+AGG 0.357579 6_2:-1113849 Msa0903730:three_prime_UTR
GGGAAGCTTAGCTGTTGATT+TGG 0.366330 6_2:-1115334 Msa0903730:CDS
TTGTAGCACATTTAGCTTCT+GGG 0.368059 6_2:-1113953 Msa0903730:three_prime_UTR
ATACACAACACTTACATGAT+TGG 0.370791 6_2:+1109123 None:intergenic
TCAGTTGCATGTGGTGTTAT+GGG 0.377051 6_2:-1114041 Msa0903730:CDS
TGAAGACCTCAACAGTAATA+GGG 0.381134 6_2:-1114329 Msa0903730:CDS
TTGGAGTATTCATAAGTGTT+TGG 0.398491 6_2:-1114115 Msa0903730:CDS
TATCAAAACATTGGAGATAG+TGG 0.400846 6_2:-1114183 Msa0903730:CDS
GTTGGTACTTGGAATGTTGC+TGG 0.407117 6_2:-1115369 Msa0903730:CDS
TTATTAGATGCCTAGCTAGA+TGG 0.410366 6_2:+1110196 None:intergenic
AGAAAGGTGATGAAGGTAGA+AGG 0.414224 6_2:-1113926 Msa0903730:three_prime_UTR
TTAAGTTTGTATGAAATTGA+AGG 0.414336 6_2:-1115760 Msa0903730:intron
AAGATGAGTACTTATATGTT+GGG 0.424011 6_2:+1110070 None:intergenic
GAAGGATATGATATATATCA+AGG 0.425478 6_2:+1115880 None:intergenic
ATCAAATTCCAGTGACTGAA+TGG 0.428675 6_2:+1115561 None:intergenic
TGATTGGATTGCAAAATTGT+TGG 0.441238 6_2:+1109139 None:intergenic
AAATCTTTCCATTCAGTCAC+TGG 0.441692 6_2:-1115569 Msa0903730:CDS
ATTTCATACAAACTTAATGA+TGG 0.452320 6_2:+1115766 None:intergenic
ATCTAATAAGAAAGCAAGAT+TGG 0.453124 6_2:-1110182 Msa0903730:three_prime_UTR
GCAGGTGTGATAGAATTCTA+TGG 0.456577 6_2:-1109303 Msa0903730:intron
AAGATGAAAGATGATTTGAT+AGG 0.458094 6_2:+1116012 None:intergenic
TTCCAATTTGTTGCCACTGA+TGG 0.460598 6_2:+1114297 None:intergenic
CAAAATAAGGTAGCTTAAGA+TGG 0.462011 6_2:+1116076 None:intergenic
GAAGATGAGTACTTATATGT+TGG 0.474834 6_2:+1110069 None:intergenic
GATATAAGAGGCTATCCAAT+TGG 0.478067 6_2:-1115816 Msa0903730:CDS
TTCTGCCCCTATTACTGTTG+AGG 0.480423 6_2:+1114323 None:intergenic
TTGGTTAAAAGAACAAGTGT+TGG 0.481233 6_2:-1114096 Msa0903730:CDS
TTAGCTTCTGGGGAAAAGAA+AGG 0.481354 6_2:-1113942 Msa0903730:three_prime_UTR
TCTGCAGATATATATGTTCT+CGG 0.485834 6_2:-1115288 Msa0903730:CDS
TTCCAAAATCTTATAAGTCA+TGG 0.487370 6_2:-1115860 Msa0903730:exon
GTAGAGAAGAGTGCTGAAAC+TGG 0.489823 6_2:+1109217 None:intergenic
AGCAATATCTATTGTGGTGG+TGG 0.490845 6_2:-1110042 Msa0903730:three_prime_UTR
AGATGAGAGTGATGAATATG+AGG 0.493133 6_2:-1115593 Msa0903730:CDS
TTGGTTCACCACCAAACAAA+AGG 0.498272 6_2:-1115797 Msa0903730:CDS
GGTGGCCTTCCAACTAGATC+AGG 0.501700 6_2:-1110024 Msa0903730:three_prime_UTR
AAGGTAGCTTAAGATGGAGT+TGG 0.506822 6_2:+1116082 None:intergenic
ATGGGATATTTAGGAAACAA+AGG 0.510358 6_2:-1114023 Msa0903730:CDS
ATCATCCAGCAAAGAACTTG+TGG 0.511436 6_2:-1109179 Msa0903730:three_prime_UTR
CAAGAAAATTATCAAAACAT+TGG 0.513877 6_2:-1114192 Msa0903730:CDS
CTTCATTAACATTGAAAGTG+AGG 0.516557 6_2:+1108739 None:intergenic
AGAATTCTATGGTATGGTAA+AGG 0.528647 6_2:-1109292 Msa0903730:three_prime_UTR
TGTGATAGAATTCTATGGTA+TGG 0.529314 6_2:-1109298 Msa0903730:three_prime_UTR
AATAAGAAAGCAAGATTGGA+AGG 0.529530 6_2:-1110178 Msa0903730:three_prime_UTR
ACAACAAATTTGAGTTCCCA+TGG 0.529948 6_2:-1114251 Msa0903730:CDS
CTGCAGATATATATGTTCTC+GGG 0.531854 6_2:-1115287 Msa0903730:intron
TTGTTTGGTGGTGAACCAAT+TGG 0.532362 6_2:+1115801 None:intergenic
TTTCTCCTGATCTAGTTGGA+AGG 0.532772 6_2:+1110019 None:intergenic
TTAGGAAACAAAGGTTGTGT+GGG 0.539213 6_2:-1114014 Msa0903730:CDS
GGAGTTAGTATGTTGATTGA+AGG 0.544715 6_2:-1113993 Msa0903730:exon
GGCAAGGATGAATTTAACAT+AGG 0.550454 6_2:+1114222 None:intergenic
TTTGGTAAATACAATTGTGG+TGG 0.554873 6_2:-1108570 Msa0903730:three_prime_UTR
TTTAGGAAACAAAGGTTGTG+TGG 0.554999 6_2:-1114015 Msa0903730:CDS
ATTACTGTTGAGGTCTTCAA+AGG 0.559244 6_2:+1114333 None:intergenic
TTGGATTGCAAAATTGTTGG+AGG 0.563405 6_2:+1109142 None:intergenic
GGGGAAAAGAAAGGTGATGA+AGG 0.566624 6_2:-1113933 Msa0903730:three_prime_UTR
GCATTTCAACAAATAAGCTA+AGG 0.576448 6_2:-1115534 Msa0903730:intron
TCCACTAGCAATATCTATTG+TGG 0.577164 6_2:-1110048 Msa0903730:three_prime_UTR
ACTTGAAAGACCATCTAGCT+AGG 0.579325 6_2:-1110206 Msa0903730:three_prime_UTR
TAGTGTGTTTGTGACTTGCA+TGG 0.581411 6_2:-1115914 Msa0903730:five_prime_UTR
TTAACATAGGTGTTAACCAT+GGG 0.581644 6_2:+1114235 None:intergenic
TGTAGCACATTTAGCTTCTG+GGG 0.589661 6_2:-1113952 Msa0903730:three_prime_UTR
TGGATTGCAAAATTGTTGGA+GGG 0.599777 6_2:+1109143 None:intergenic
TTTAACATAGGTGTTAACCA+TGG 0.603323 6_2:+1114234 None:intergenic
GAATTTGGTAAATACAATTG+TGG 0.604043 6_2:-1108573 Msa0903730:three_prime_UTR
ATTGTGGTGGAGACTGAAGA+TGG 0.609468 6_2:-1108557 Msa0903730:three_prime_UTR
AGAGTTTGTTCAGTTGCATG+TGG 0.609478 6_2:-1114050 Msa0903730:CDS
TAGCTGTTGATTTGGATGAG+TGG 0.611111 6_2:-1115326 Msa0903730:CDS
TTATTGCAGGAGGTGAGCAA+AGG 0.611315 6_2:-1108782 Msa0903730:intron
GATGAGAGTGATGAATATGA+GGG 0.613097 6_2:-1115592 Msa0903730:CDS
GAAGACCTCAACAGTAATAG+GGG 0.617039 6_2:-1114328 Msa0903730:CDS
TGTTGCTGGAAGATCTCCTG+TGG 0.622172 6_2:-1115355 Msa0903730:CDS
TCAACAGCTAAGCTTCCCAC+AGG 0.622850 6_2:+1115339 None:intergenic
TTGAGCGTTGAACACAAGAG+AGG 0.623495 6_2:+1116109 None:intergenic
ATGTTAATGAAGAATGTACA+AGG 0.625047 6_2:-1108728 Msa0903730:three_prime_UTR
AGATGAGTACTTATATGTTG+GGG 0.634547 6_2:+1110071 None:intergenic
AAGTGGTTACTATACCATGC+TGG 0.634633 6_2:+1109985 None:intergenic
ACTAGCAATATCTATTGTGG+TGG 0.637512 6_2:-1110045 Msa0903730:three_prime_UTR
ACCACAATAGATATTGCTAG+TGG 0.647730 6_2:+1110047 None:intergenic
AAAAGCAAAGAACACCAGCA+TGG 0.661082 6_2:-1109999 Msa0903730:intron
GTTGCTGGAAGATCTCCTGT+GGG 0.696089 6_2:-1115354 Msa0903730:CDS
AGGGGCAGAAGATCCATCAG+TGG 0.708283 6_2:-1114310 Msa0903730:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTTTATTTTTTTAT+TGG - chr6_2:1111584-1111603 Msa0903730:intron 0.0%
!!! TTATTTTTTATTTTTTTATT+GGG - chr6_2:1111585-1111604 Msa0903730:intron 0.0%
!! AAAAATTAATAAAAAAAATT+TGG - chr6_2:1111657-1111676 Msa0903730:intron 0.0%
!!! AAAAATTAATAAAAAAATTT+TGG + chr6_2:1112974-1112993 None:intergenic 0.0%
!! AAAAAAATATTAAAAAATTA+AGG + chr6_2:1113016-1113035 None:intergenic 0.0%
!!! TTATTTTTTATTTTTTTATT+GGG + chr6_2:1111585-1111604 None:intergenic 0.0%
!!! TTTATTTTTTATTTTTTTAT+TGG + chr6_2:1111584-1111603 None:intergenic 0.0%
!!! ATTTATTTTTTATAATATTA+TGG + chr6_2:1113827-1113846 None:intergenic 0.0%
!!! TTTATTTTTTATTTTTTTAT+TGG - chr6_2:1111584-1111603 Msa0903730:intron 0.0%
!!! TTATTTTTTATTTTTTTATT+GGG - chr6_2:1111585-1111604 Msa0903730:intron 0.0%
!! AAAAATTAATAAAAAAAATT+TGG - chr6_2:1111657-1111676 Msa0903730:intron 0.0%
!!! AAAAATTAATAAAAAAATTT+TGG + chr6_2:1112974-1112993 None:intergenic 0.0%
!! AAAAAAATATTAAAAAATTA+AGG + chr6_2:1113016-1113035 None:intergenic 0.0%
!!! TTATTTTTTATTTTTTTATT+GGG + chr6_2:1111585-1111604 None:intergenic 0.0%
!!! TTTATTTTTTATTTTTTTAT+TGG + chr6_2:1111584-1111603 None:intergenic 0.0%
!!! ATTTATTTTTTATAATATTA+TGG + chr6_2:1113827-1113846 None:intergenic 0.0%
!!! TACAATTTTTTTACATATAA+TGG + chr6_2:1108602-1108621 None:intergenic 10.0%
!! TAGAAAAAAAAAATGTATAT+AGG - chr6_2:1108909-1108928 Msa0903730:three_prime_UTR 10.0%
!!! TTAGAAATTTTATAAAATAC+AGG - chr6_2:1109458-1109477 Msa0903730:intron 10.0%
!!! ATAAATCGAATTTTAATTAA+AGG + chr6_2:1109914-1109933 None:intergenic 10.0%
!! AATTAAAATTCGATTTATTT+CGG - chr6_2:1109657-1109676 Msa0903730:intron 10.0%
!!! AATAAATCGAATTTTAATTA+AGG - chr6_2:1109913-1109932 Msa0903730:intron 10.0%
!!! ATAAATCGAATTTTAATTAA+GGG - chr6_2:1109914-1109933 Msa0903730:intron 10.0%
!!! ACAATTTAAAATTATTACAT+AGG - chr6_2:1110103-1110122 Msa0903730:three_prime_UTR 10.0%
!! ACAACATTAATATTAATATA+AGG + chr6_2:1110780-1110799 None:intergenic 10.0%
!!! AAAAACTAAATTTTAGAAAT+GGG + chr6_2:1110971-1110990 None:intergenic 10.0%
!! ATGAAAAAATTTAAAAATTC+TGG - chr6_2:1111862-1111881 Msa0903730:intron 10.0%
!!! ATTTTTATTAGTATTTTTTC+CGG + chr6_2:1112606-1112625 None:intergenic 10.0%
!!! TTAATTACACTTTTAATATT+AGG - chr6_2:1112437-1112456 Msa0903730:intron 10.0%
!!! ATTTTTATTAGTATTTTTTC+CGG - chr6_2:1112606-1112625 Msa0903730:intron 10.0%
!! ATGAAAAAATTTAAAAATTC+TGG + chr6_2:1111862-1111881 None:intergenic 10.0%
!! GATAAAAAAATTAAAAATTC+TGG + chr6_2:1112904-1112923 None:intergenic 10.0%
!!! AATATTTTTAGGTTAAAAAA+TGG - chr6_2:1113415-1113434 Msa0903730:intron 10.0%
!!! ATATTTTTAGGTTAAAAAAT+GGG - chr6_2:1113416-1113435 Msa0903730:intron 10.0%
!!! TGTTTAAAATAATTTTTTCA+TGG - chr6_2:1115011-1115030 Msa0903730:intron 10.0%
!!! TACAATTTTTTTACATATAA+TGG + chr6_2:1108602-1108621 None:intergenic 10.0%
!! TAGAAAAAAAAAATGTATAT+AGG - chr6_2:1108909-1108928 Msa0903730:three_prime_UTR 10.0%
!!! TTAGAAATTTTATAAAATAC+AGG - chr6_2:1109458-1109477 Msa0903730:intron 10.0%
!!! ATAAATCGAATTTTAATTAA+AGG + chr6_2:1109914-1109933 None:intergenic 10.0%
!! AATTAAAATTCGATTTATTT+CGG - chr6_2:1109657-1109676 Msa0903730:intron 10.0%
!!! AATAAATCGAATTTTAATTA+AGG - chr6_2:1109913-1109932 Msa0903730:intron 10.0%
!!! ATAAATCGAATTTTAATTAA+GGG - chr6_2:1109914-1109933 Msa0903730:intron 10.0%
!!! ACAATTTAAAATTATTACAT+AGG - chr6_2:1110103-1110122 Msa0903730:three_prime_UTR 10.0%
!! ACAACATTAATATTAATATA+AGG + chr6_2:1110780-1110799 None:intergenic 10.0%
!!! AAAAACTAAATTTTAGAAAT+GGG + chr6_2:1110971-1110990 None:intergenic 10.0%
!! ATGAAAAAATTTAAAAATTC+TGG - chr6_2:1111862-1111881 Msa0903730:intron 10.0%
!!! ATTTTTATTAGTATTTTTTC+CGG + chr6_2:1112606-1112625 None:intergenic 10.0%
!!! TTAATTACACTTTTAATATT+AGG - chr6_2:1112437-1112456 Msa0903730:intron 10.0%
!!! ATTTTTATTAGTATTTTTTC+CGG - chr6_2:1112606-1112625 Msa0903730:intron 10.0%
!! ATGAAAAAATTTAAAAATTC+TGG + chr6_2:1111862-1111881 None:intergenic 10.0%
!! GATAAAAAAATTAAAAATTC+TGG + chr6_2:1112904-1112923 None:intergenic 10.0%
!!! AATATTTTTAGGTTAAAAAA+TGG - chr6_2:1113415-1113434 Msa0903730:intron 10.0%
!!! ATATTTTTAGGTTAAAAAAT+GGG - chr6_2:1113416-1113435 Msa0903730:intron 10.0%
!!! TGTTTAAAATAATTTTTTCA+TGG - chr6_2:1115011-1115030 Msa0903730:intron 10.0%
!!! AGATTTATTTCTTAATCTAA+CGG + chr6_2:1109387-1109406 None:intergenic 15.0%
!!! TTTTATAAAATACAGGTTAA+TGG - chr6_2:1109465-1109484 Msa0903730:intron 15.0%
!! TTAAAATTATTACATAGGTT+TGG - chr6_2:1110108-1110127 Msa0903730:three_prime_UTR 15.0%
!!! AAAACTAAATTTTAGAAATG+GGG + chr6_2:1110970-1110989 None:intergenic 15.0%
!!! CAAAAACTAAATTTTAGAAA+TGG + chr6_2:1110972-1110991 None:intergenic 15.0%
!! CTATTTCACTTATATTAAAA+TGG - chr6_2:1110992-1111011 Msa0903730:intron 15.0%
!!! TTGTTATTGTTTTTTACAAA+GGG + chr6_2:1111066-1111085 None:intergenic 15.0%
!!! TTTGTTATTGTTTTTTACAA+AGG + chr6_2:1111067-1111086 None:intergenic 15.0%
!!! TTGTTATTGTTTTTTTATGA+AGG - chr6_2:1111341-1111360 Msa0903730:intron 15.0%
!!! TGTTATTGTTTTTTTATGAA+GGG - chr6_2:1111342-1111361 Msa0903730:intron 15.0%
!!! ATTTTTGTGTATTTATAAAC+CGG + chr6_2:1112631-1112650 None:intergenic 15.0%
!!! TTTTTATTAGTATTTTTTCC+GGG + chr6_2:1112607-1112626 None:intergenic 15.0%
!! TATAAATAAACAAAAATTCC+CGG - chr6_2:1112121-1112140 Msa0903730:intron 15.0%
!! AGTATTTATCAAAAAAATTC+CGG + chr6_2:1112488-1112507 None:intergenic 15.0%
!! TTAATGTTAGTGTTAATATT+AGG - chr6_2:1112413-1112432 Msa0903730:intron 15.0%
!! AGTATTTATCAAAAAAATTC+CGG - chr6_2:1112488-1112507 Msa0903730:intron 15.0%
!! TATAAATAAACAAAAATTCC+CGG + chr6_2:1112121-1112140 None:intergenic 15.0%
!!! TTTTTATTAGTATTTTTTCC+GGG - chr6_2:1112607-1112626 Msa0903730:intron 15.0%
!!! ATTTTTGTGTATTTATAAAC+CGG - chr6_2:1112631-1112650 Msa0903730:intron 15.0%
!! ATCAACTTTGTAAAATTAAT+TGG + chr6_2:1113484-1113503 None:intergenic 15.0%
!!! TTTTTCATACGTAAAAATTA+GGG + chr6_2:1114036-1114055 None:intergenic 15.0%
!!! TTTTTTCATACGTAAAAATT+AGG + chr6_2:1114037-1114056 None:intergenic 15.0%
!!! CTTTTTTCTTTGTTAATTAT+AGG - chr6_2:1114627-1114646 Msa0903730:intron 15.0%
!! AAAATATCAAGCTTAAAATA+TGG + chr6_2:1114761-1114780 None:intergenic 15.0%
!!! TTAACAACTGTAATTTTTTT+TGG - chr6_2:1114922-1114941 Msa0903730:intron 15.0%
!! TTAATGTTATTGAAATTAGA+TGG + chr6_2:1115119-1115138 None:intergenic 15.0%
!! TTAATATAGAAATTATGCAT+TGG - chr6_2:1115535-1115554 Msa0903730:CDS 15.0%
!! ATTAGAAAAATGACAAAAAT+TGG - chr6_2:1115923-1115942 Msa0903730:five_prime_UTR 15.0%
!!! AGATTTATTTCTTAATCTAA+CGG + chr6_2:1109387-1109406 None:intergenic 15.0%
!!! TTTTATAAAATACAGGTTAA+TGG - chr6_2:1109465-1109484 Msa0903730:intron 15.0%
!! TTAAAATTATTACATAGGTT+TGG - chr6_2:1110108-1110127 Msa0903730:three_prime_UTR 15.0%
!!! AAAACTAAATTTTAGAAATG+GGG + chr6_2:1110970-1110989 None:intergenic 15.0%
!!! CAAAAACTAAATTTTAGAAA+TGG + chr6_2:1110972-1110991 None:intergenic 15.0%
!! CTATTTCACTTATATTAAAA+TGG - chr6_2:1110992-1111011 Msa0903730:intron 15.0%
!!! TTGTTATTGTTTTTTACAAA+GGG + chr6_2:1111066-1111085 None:intergenic 15.0%
!!! TTTGTTATTGTTTTTTACAA+AGG + chr6_2:1111067-1111086 None:intergenic 15.0%
!!! TTGTTATTGTTTTTTTATGA+AGG - chr6_2:1111341-1111360 Msa0903730:intron 15.0%
!!! TGTTATTGTTTTTTTATGAA+GGG - chr6_2:1111342-1111361 Msa0903730:intron 15.0%
!!! ATTTTTGTGTATTTATAAAC+CGG + chr6_2:1112631-1112650 None:intergenic 15.0%
!!! TTTTTATTAGTATTTTTTCC+GGG + chr6_2:1112607-1112626 None:intergenic 15.0%
!! TATAAATAAACAAAAATTCC+CGG - chr6_2:1112121-1112140 Msa0903730:intron 15.0%
!! AGTATTTATCAAAAAAATTC+CGG + chr6_2:1112488-1112507 None:intergenic 15.0%
!! TTAATGTTAGTGTTAATATT+AGG - chr6_2:1112413-1112432 Msa0903730:intron 15.0%
!! AGTATTTATCAAAAAAATTC+CGG - chr6_2:1112488-1112507 Msa0903730:intron 15.0%
!! TATAAATAAACAAAAATTCC+CGG + chr6_2:1112121-1112140 None:intergenic 15.0%
!!! TTTTTATTAGTATTTTTTCC+GGG - chr6_2:1112607-1112626 Msa0903730:intron 15.0%
!!! ATTTTTGTGTATTTATAAAC+CGG - chr6_2:1112631-1112650 Msa0903730:intron 15.0%
!! ATCAACTTTGTAAAATTAAT+TGG + chr6_2:1113484-1113503 None:intergenic 15.0%
!!! TTTTTCATACGTAAAAATTA+GGG + chr6_2:1114036-1114055 None:intergenic 15.0%
!!! TTTTTTCATACGTAAAAATT+AGG + chr6_2:1114037-1114056 None:intergenic 15.0%
!!! CTTTTTTCTTTGTTAATTAT+AGG - chr6_2:1114627-1114646 Msa0903730:intron 15.0%
!! AAAATATCAAGCTTAAAATA+TGG + chr6_2:1114761-1114780 None:intergenic 15.0%
!!! TTAACAACTGTAATTTTTTT+TGG - chr6_2:1114922-1114941 Msa0903730:intron 15.0%
!! TTAATGTTATTGAAATTAGA+TGG + chr6_2:1115119-1115138 None:intergenic 15.0%
!! TTAATATAGAAATTATGCAT+TGG - chr6_2:1115535-1115554 Msa0903730:CDS 15.0%
!! ATTAGAAAAATGACAAAAAT+TGG - chr6_2:1115923-1115942 Msa0903730:five_prime_UTR 15.0%
!! ATTTCATACAAACTTAATGA+TGG + chr6_2:1108819-1108838 None:intergenic 20.0%
!! TTAAGTTTGTATGAAATTGA+AGG - chr6_2:1108822-1108841 Msa0903730:intron 20.0%
!!! ATATTTTTCAGGATTTTTGT+TGG - chr6_2:1109195-1109214 Msa0903730:three_prime_UTR 20.0%
!!! CGTTTTTGAATTAAAACTAA+CGG + chr6_2:1109849-1109868 None:intergenic 20.0%
!!! AGTTTTAATTCAAAAACGTT+AGG - chr6_2:1109722-1109741 Msa0903730:intron 20.0%
!!! CGTTTTTGAATTAAAACTAA+CGG - chr6_2:1109849-1109868 Msa0903730:intron 20.0%
!! GATACTACATAAATAGTTAA+GGG - chr6_2:1109945-1109964 Msa0903730:intron 20.0%
!!! TTATTCTTTTAATTAGAGTG+AGG - chr6_2:1110185-1110204 Msa0903730:three_prime_UTR 20.0%
!!! TGATAATTTTCTTGATCATT+TGG + chr6_2:1110384-1110403 None:intergenic 20.0%
!! CAAGAAAATTATCAAAACAT+TGG - chr6_2:1110390-1110409 Msa0903730:intron 20.0%
!!! ATCAAGTTGAAGAAATTTTT+AGG - chr6_2:1110683-1110702 Msa0903730:intron 20.0%
!!! TTATCATTTTTTGACACTTT+TGG - chr6_2:1111451-1111470 Msa0903730:intron 20.0%
!! GAAAAAAAAGGAAAAAAATC+TGG - chr6_2:1111823-1111842 Msa0903730:intron 20.0%
!! TATTTATAAACCGAGAATAA+GGG + chr6_2:1112522-1112541 None:intergenic 20.0%
!! TTATTTATAAACCGAGAATA+AGG + chr6_2:1112521-1112540 None:intergenic 20.0%
!! TATAAATAAACAAAAGTTCC+CGG - chr6_2:1111978-1111997 Msa0903730:intron 20.0%
!!! TTTTTGTGTATTTATAAACC+GGG + chr6_2:1112632-1112651 None:intergenic 20.0%
!! TATAAATACACAAAAATTCC+CGG - chr6_2:1112003-1112022 Msa0903730:intron 20.0%
!! ATATATAAAAAACCTAAGCT+CGG - chr6_2:1112061-1112080 Msa0903730:intron 20.0%
!! TATTTATAAACCGAGAATAA+GGG + chr6_2:1112522-1112541 None:intergenic 20.0%
!! TTATTTATAAACCGAGAATA+AGG + chr6_2:1112521-1112540 None:intergenic 20.0%
!! GTATTTATCAAAAAAATTCC+GGG + chr6_2:1112489-1112508 None:intergenic 20.0%
!! CAACAAGTAATTTACATATT+AGG - chr6_2:1112221-1112240 Msa0903730:intron 20.0%
!!! AGTACCAAAATATATGTTTT+TGG - chr6_2:1112269-1112288 Msa0903730:intron 20.0%
!!! AGTACCAAAAACATATATTT+TGG + chr6_2:1112276-1112295 None:intergenic 20.0%
!! TCAAAAAAATGATCAAATAG+CGG - chr6_2:1112320-1112339 Msa0903730:intron 20.0%
!! ATTTCCATAATAGTCAATAT+CGG + chr6_2:1112380-1112399 None:intergenic 20.0%
!! GTATTTATCAAAAAAATTCC+GGG - chr6_2:1112489-1112508 Msa0903730:intron 20.0%
!! TTATTTATAAACCGAGAATA+AGG - chr6_2:1112521-1112540 Msa0903730:intron 20.0%
!! TATTTATAAACCGAGAATAA+GGG - chr6_2:1112522-1112541 Msa0903730:intron 20.0%
!! TATAAATACACAAAAATTCC+CGG + chr6_2:1112003-1112022 None:intergenic 20.0%
!!! TTTTTGTGTATTTATAAACC+GGG - chr6_2:1112632-1112651 Msa0903730:intron 20.0%
!! TATTTATAAACCGAGAATAA+GGG - chr6_2:1112522-1112541 Msa0903730:intron 20.0%
!! GAAAAAAAAGGAAAAAAATC+TGG + chr6_2:1111823-1111842 None:intergenic 20.0%
!!! TTATCATTTTTTGACACTTT+TGG + chr6_2:1111451-1111470 None:intergenic 20.0%
!!! TTTCGAAGTGAATTTTTAAT+AGG + chr6_2:1113361-1113380 None:intergenic 20.0%
!!! AAATGTGTTACTCAATATAA+GGG + chr6_2:1113694-1113713 None:intergenic 20.0%
!! TTATATTGAGTAACACATTT+CGG - chr6_2:1113694-1113713 Msa0903730:intron 20.0%
!!! ATTAATTTTAAGAACGAACT+AGG + chr6_2:1113868-1113887 None:intergenic 20.0%
!! ATTAATAGTAAACATGTCTA+AGG + chr6_2:1113891-1113910 None:intergenic 20.0%
!! AAATGTTATATGGTAGAATT+TGG + chr6_2:1113956-1113975 None:intergenic 20.0%
!!! TTTTAGACAGAAATGTTATA+TGG + chr6_2:1113966-1113985 None:intergenic 20.0%
!!! ATAACATTTCTGTCTAAAAT+TGG - chr6_2:1113967-1113986 Msa0903730:three_prime_UTR 20.0%
!!! TAAAATTGGTTTTAATGGTA+AGG - chr6_2:1113981-1114000 Msa0903730:three_prime_UTR 20.0%
!!! AAAATTGGTTTTAATGGTAA+GGG - chr6_2:1113982-1114001 Msa0903730:three_prime_UTR 20.0%
!!! TTTTACGTATGAAAAAATTC+CGG - chr6_2:1114040-1114059 Msa0903730:CDS 20.0%
!! AAAGTCTATTTCATATTTGT+AGG - chr6_2:1114151-1114170 Msa0903730:CDS 20.0%
!!! GTAAAACATTTTTACATTGT+TGG + chr6_2:1115092-1115111 None:intergenic 20.0%
!!! ATTATTGTAGAGTTTTTTTG+AGG - chr6_2:1115193-1115212 Msa0903730:intron 20.0%
!!! TTATTGTAGAGTTTTTTTGA+GGG - chr6_2:1115194-1115213 Msa0903730:intron 20.0%
!! TGTTGTGTATATTAAGAAAA+TGG - chr6_2:1115472-1115491 Msa0903730:intron 20.0%
!! GTTGTGTATATTAAGAAAAT+GGG - chr6_2:1115473-1115492 Msa0903730:intron 20.0%
!!! TTCTTCAAGTTTTTTGAAAT+TGG - chr6_2:1115752-1115771 Msa0903730:intron 20.0%
!!! TTTTTGAAATTGGTATTCTA+AGG - chr6_2:1115762-1115781 Msa0903730:CDS 20.0%
!! ATTTCATACAAACTTAATGA+TGG + chr6_2:1108819-1108838 None:intergenic 20.0%
!! TTAAGTTTGTATGAAATTGA+AGG - chr6_2:1108822-1108841 Msa0903730:intron 20.0%
!!! ATATTTTTCAGGATTTTTGT+TGG - chr6_2:1109195-1109214 Msa0903730:three_prime_UTR 20.0%
!!! CGTTTTTGAATTAAAACTAA+CGG + chr6_2:1109849-1109868 None:intergenic 20.0%
!!! AGTTTTAATTCAAAAACGTT+AGG - chr6_2:1109722-1109741 Msa0903730:intron 20.0%
!!! CGTTTTTGAATTAAAACTAA+CGG - chr6_2:1109849-1109868 Msa0903730:intron 20.0%
!! GATACTACATAAATAGTTAA+GGG - chr6_2:1109945-1109964 Msa0903730:intron 20.0%
!!! TTATTCTTTTAATTAGAGTG+AGG - chr6_2:1110185-1110204 Msa0903730:three_prime_UTR 20.0%
!!! TGATAATTTTCTTGATCATT+TGG + chr6_2:1110384-1110403 None:intergenic 20.0%
!! CAAGAAAATTATCAAAACAT+TGG - chr6_2:1110390-1110409 Msa0903730:intron 20.0%
!!! ATCAAGTTGAAGAAATTTTT+AGG - chr6_2:1110683-1110702 Msa0903730:intron 20.0%
!!! TTATCATTTTTTGACACTTT+TGG - chr6_2:1111451-1111470 Msa0903730:intron 20.0%
!! GAAAAAAAAGGAAAAAAATC+TGG - chr6_2:1111823-1111842 Msa0903730:intron 20.0%
!! TATTTATAAACCGAGAATAA+GGG + chr6_2:1112522-1112541 None:intergenic 20.0%
!! TTATTTATAAACCGAGAATA+AGG + chr6_2:1112521-1112540 None:intergenic 20.0%
!! TATAAATAAACAAAAGTTCC+CGG - chr6_2:1111978-1111997 Msa0903730:intron 20.0%
!!! TTTTTGTGTATTTATAAACC+GGG + chr6_2:1112632-1112651 None:intergenic 20.0%
!! TATAAATACACAAAAATTCC+CGG - chr6_2:1112003-1112022 Msa0903730:intron 20.0%
!! ATATATAAAAAACCTAAGCT+CGG - chr6_2:1112061-1112080 Msa0903730:intron 20.0%
!! TATTTATAAACCGAGAATAA+GGG + chr6_2:1112522-1112541 None:intergenic 20.0%
!! TTATTTATAAACCGAGAATA+AGG + chr6_2:1112521-1112540 None:intergenic 20.0%
!! GTATTTATCAAAAAAATTCC+GGG + chr6_2:1112489-1112508 None:intergenic 20.0%
!! CAACAAGTAATTTACATATT+AGG - chr6_2:1112221-1112240 Msa0903730:intron 20.0%
!!! AGTACCAAAATATATGTTTT+TGG - chr6_2:1112269-1112288 Msa0903730:intron 20.0%
!!! AGTACCAAAAACATATATTT+TGG + chr6_2:1112276-1112295 None:intergenic 20.0%
!! TCAAAAAAATGATCAAATAG+CGG - chr6_2:1112320-1112339 Msa0903730:intron 20.0%
!! ATTTCCATAATAGTCAATAT+CGG + chr6_2:1112380-1112399 None:intergenic 20.0%
!! GTATTTATCAAAAAAATTCC+GGG - chr6_2:1112489-1112508 Msa0903730:intron 20.0%
!! TTATTTATAAACCGAGAATA+AGG - chr6_2:1112521-1112540 Msa0903730:intron 20.0%
!! TATTTATAAACCGAGAATAA+GGG - chr6_2:1112522-1112541 Msa0903730:intron 20.0%
!! TATAAATACACAAAAATTCC+CGG + chr6_2:1112003-1112022 None:intergenic 20.0%
!!! TTTTTGTGTATTTATAAACC+GGG - chr6_2:1112632-1112651 Msa0903730:intron 20.0%
!! TATTTATAAACCGAGAATAA+GGG - chr6_2:1112522-1112541 Msa0903730:intron 20.0%
!! GAAAAAAAAGGAAAAAAATC+TGG + chr6_2:1111823-1111842 None:intergenic 20.0%
!!! TTATCATTTTTTGACACTTT+TGG + chr6_2:1111451-1111470 None:intergenic 20.0%
!!! TTTCGAAGTGAATTTTTAAT+AGG + chr6_2:1113361-1113380 None:intergenic 20.0%
!!! AAATGTGTTACTCAATATAA+GGG + chr6_2:1113694-1113713 None:intergenic 20.0%
!! TTATATTGAGTAACACATTT+CGG - chr6_2:1113694-1113713 Msa0903730:intron 20.0%
!!! ATTAATTTTAAGAACGAACT+AGG + chr6_2:1113868-1113887 None:intergenic 20.0%
!! ATTAATAGTAAACATGTCTA+AGG + chr6_2:1113891-1113910 None:intergenic 20.0%
!! AAATGTTATATGGTAGAATT+TGG + chr6_2:1113956-1113975 None:intergenic 20.0%
!!! TTTTAGACAGAAATGTTATA+TGG + chr6_2:1113966-1113985 None:intergenic 20.0%
!!! ATAACATTTCTGTCTAAAAT+TGG - chr6_2:1113967-1113986 Msa0903730:three_prime_UTR 20.0%
!!! TAAAATTGGTTTTAATGGTA+AGG - chr6_2:1113981-1114000 Msa0903730:three_prime_UTR 20.0%
!!! AAAATTGGTTTTAATGGTAA+GGG - chr6_2:1113982-1114001 Msa0903730:three_prime_UTR 20.0%
!!! TTTTACGTATGAAAAAATTC+CGG - chr6_2:1114040-1114059 Msa0903730:CDS 20.0%
!! AAAGTCTATTTCATATTTGT+AGG - chr6_2:1114151-1114170 Msa0903730:CDS 20.0%
!!! GTAAAACATTTTTACATTGT+TGG + chr6_2:1115092-1115111 None:intergenic 20.0%
!!! ATTATTGTAGAGTTTTTTTG+AGG - chr6_2:1115193-1115212 Msa0903730:intron 20.0%
!!! TTATTGTAGAGTTTTTTTGA+GGG - chr6_2:1115194-1115213 Msa0903730:intron 20.0%
!! TGTTGTGTATATTAAGAAAA+TGG - chr6_2:1115472-1115491 Msa0903730:intron 20.0%
!! GTTGTGTATATTAAGAAAAT+GGG - chr6_2:1115473-1115492 Msa0903730:intron 20.0%
!!! TTCTTCAAGTTTTTTGAAAT+TGG - chr6_2:1115752-1115771 Msa0903730:intron 20.0%
!!! TTTTTGAAATTGGTATTCTA+AGG - chr6_2:1115762-1115781 Msa0903730:CDS 20.0%
! AAGATGAAAGATGATTTGAT+AGG + chr6_2:1108573-1108592 None:intergenic 25.0%
! TTCTTTCTTGTCATAGATAT+TGG - chr6_2:1108642-1108661 Msa0903730:three_prime_UTR 25.0%
! GAAGGATATGATATATATCA+AGG + chr6_2:1108705-1108724 None:intergenic 25.0%
!! ATGACTTATAAGATTTTGGA+AGG + chr6_2:1108723-1108742 None:intergenic 25.0%
! TTCCAAAATCTTATAAGTCA+TGG - chr6_2:1108722-1108741 Msa0903730:three_prime_UTR 25.0%
! ACCAAAAATCAAGATATAAG+AGG - chr6_2:1108754-1108773 Msa0903730:three_prime_UTR 25.0%
!! TTTAGGCTAAATTGCATTTT+TGG - chr6_2:1109597-1109616 Msa0903730:intron 25.0%
! GATACTACCTAAATAGTTAA+GGG + chr6_2:1109624-1109643 None:intergenic 25.0%
! TTGAATTAAAACTAACGGAA+AGG + chr6_2:1109854-1109873 None:intergenic 25.0%
!!! TTTTCTTCTGGAATTTTTCT+AGG - chr6_2:1109754-1109773 Msa0903730:intron 25.0%
!!! TTCTTGTTGTTAAAGGTTTA+TGG - chr6_2:1109778-1109797 Msa0903730:intron 25.0%
! ATGATATGAAGATGAAAAAG+AGG - chr6_2:1109803-1109822 Msa0903730:intron 25.0%
! CGATACTACATAAATAGTTA+AGG - chr6_2:1109944-1109963 Msa0903730:intron 25.0%
!! AAAAACGTAGACGATTTTAT+TGG + chr6_2:1110147-1110166 None:intergenic 25.0%
! ACAAATTGGAACAATCTTAT+AGG - chr6_2:1110297-1110316 Msa0903730:intron 25.0%
! TAGCTAGTAAAAAAATGGTT+TGG - chr6_2:1110448-1110467 Msa0903730:intron 25.0%
! TAAACAAGAAAAAACACAGA+GGG + chr6_2:1110819-1110838 None:intergenic 25.0%
! ATAAACAAGAAAAAACACAG+AGG + chr6_2:1110820-1110839 None:intergenic 25.0%
!!! AACTGCAACAAGTTTTTTTA+CGG + chr6_2:1110911-1110930 None:intergenic 25.0%
!!! AAAAAAACTTGTTGCAGTTT+TGG - chr6_2:1110912-1110931 Msa0903730:intron 25.0%
! ATCGTAAACTAGTGAAAATA+TGG + chr6_2:1110941-1110960 None:intergenic 25.0%
!!! TTTTCACTAGTTTACGATAT+TGG - chr6_2:1110943-1110962 Msa0903730:intron 25.0%
! ATAAAGTGATCGATCAAAAT+TGG + chr6_2:1111135-1111154 None:intergenic 25.0%
!! GATCGATCACTTTATTTATT+AGG - chr6_2:1111140-1111159 Msa0903730:intron 25.0%
!! ATTAGGCTTAATTGCAATTT+TGG - chr6_2:1111157-1111176 Msa0903730:intron 25.0%
!! TGTGACTTTCTATTTTCTTA+GGG + chr6_2:1111216-1111235 None:intergenic 25.0%
!! ATGTGACTTTCTATTTTCTT+AGG + chr6_2:1111217-1111236 None:intergenic 25.0%
!!! AGTTTTGTCAGGTTTTAAAA+GGG + chr6_2:1113221-1113240 None:intergenic 25.0%
! TGTCAAAAAATGATAACTGA+AGG + chr6_2:1113195-1113214 None:intergenic 25.0%
!!! TGTATTTTTTCCCTTATTCT+CGG - chr6_2:1111953-1111972 Msa0903730:intron 25.0%
!!! CATATTTTTTCCCTTATTCT+CGG - chr6_2:1112096-1112115 Msa0903730:intron 25.0%
! TACTAATATGTGAGAAACTT+TGG - chr6_2:1112198-1112217 Msa0903730:intron 25.0%
!!! CATATTTTTTCCCTTATTCT+CGG + chr6_2:1112096-1112115 None:intergenic 25.0%
! ATACATAAAAAACCTAAGCT+CGG + chr6_2:1112570-1112589 None:intergenic 25.0%
! TATAAATACACAAAAGTTCC+CGG + chr6_2:1112653-1112672 None:intergenic 25.0%
! GTATTTATAAACCGAGAATA+AGG - chr6_2:1112664-1112683 Msa0903730:intron 25.0%
!!! TGTATTTTTTCCCTTATTCT+CGG + chr6_2:1111953-1111972 None:intergenic 25.0%
! TGTCAAAAAATGATAACTGA+AGG - chr6_2:1113195-1113214 Msa0903730:intron 25.0%
!!! AGTTTTGTCAGGTTTTAAAA+GGG - chr6_2:1113221-1113240 Msa0903730:intron 25.0%
!! AAAAGGCTTAATTACACTTT+TGG + chr6_2:1113283-1113302 None:intergenic 25.0%
!! CTTGTCAAGTCAATATTTTT+AGG - chr6_2:1113404-1113423 Msa0903730:intron 25.0%
!!! TTTCAAGTTTAGTCTTTCTT+AGG - chr6_2:1113566-1113585 Msa0903730:intron 25.0%
!! AATGTGTTACTCAATATAAG+GGG + chr6_2:1113693-1113712 None:intergenic 25.0%
!! GAAATGTGTTACTCAATATA+AGG + chr6_2:1113695-1113714 None:intergenic 25.0%
! TATATTGAGTAACACATTTC+GGG - chr6_2:1113695-1113714 Msa0903730:intron 25.0%
! CTTTAGCATGAAACATTATT+TGG + chr6_2:1113784-1113803 None:intergenic 25.0%
! CAAATAATGTTTCATGCTAA+AGG - chr6_2:1113782-1113801 Msa0903730:intron 25.0%
!!! CTGTCTAAAATTGGTTTTAA+TGG - chr6_2:1113976-1113995 Msa0903730:three_prime_UTR 25.0%
!! AATTTTTATCGATGATCTGT+TGG + chr6_2:1114094-1114113 None:intergenic 25.0%
! ATCTAATAAGAAAGCAAGAT+TGG - chr6_2:1114400-1114419 Msa0903730:intron 25.0%
! AAGATGAGTACTTATATGTT+GGG + chr6_2:1114515-1114534 None:intergenic 25.0%
!! AAGAAAAAAGTATAAGCAAG+TGG + chr6_2:1114617-1114636 None:intergenic 25.0%
! TTAATTATAGGCCATGAATT+AGG - chr6_2:1114639-1114658 Msa0903730:intron 25.0%
! TAATTATAGGCCATGAATTA+GGG - chr6_2:1114640-1114659 Msa0903730:intron 25.0%
! TTCATGGAATTAATTATGTG+TGG - chr6_2:1115027-1115046 Msa0903730:intron 25.0%
!! CATTGTCCTTAATTTTCTTA+GGG + chr6_2:1115678-1115697 None:intergenic 25.0%
!! TCATTGTCCTTAATTTTCTT+AGG + chr6_2:1115679-1115698 None:intergenic 25.0%
! ATGTTTCATGTTATTATTGC+AGG - chr6_2:1115787-1115806 Msa0903730:CDS 25.0%
! ATGTTAATGAAGAATGTACA+AGG - chr6_2:1115854-1115873 Msa0903730:exon 25.0%
!! ATATGTTTTCAGTCATGTTA+TGG - chr6_2:1115898-1115917 Msa0903730:five_prime_UTR 25.0%
!! CAAAAAAAATGTCGGATTTT+AGG + chr6_2:1115952-1115971 None:intergenic 25.0%
!!! CTAAAATCCGACATTTTTTT+TGG - chr6_2:1115950-1115969 Msa0903730:five_prime_UTR 25.0%
! TAGATCTCCAAAAAAAATGT+CGG + chr6_2:1115960-1115979 None:intergenic 25.0%
!!! TGGAGATCTAAATTTTAGAA+AGG - chr6_2:1115970-1115989 Msa0903730:five_prime_UTR 25.0%
! TAAGATTTGACTGTAGAATT+TGG - chr6_2:1115994-1116013 Msa0903730:five_prime_UTR 25.0%
! GAATTTGGTAAATACAATTG+TGG - chr6_2:1116009-1116028 Msa0903730:five_prime_UTR 25.0%
!! ATATTTTGCATGACAAACAT+CGG + chr6_2:1116078-1116097 None:intergenic 25.0%
! AAGATGAAAGATGATTTGAT+AGG + chr6_2:1108573-1108592 None:intergenic 25.0%
! TTCTTTCTTGTCATAGATAT+TGG - chr6_2:1108642-1108661 Msa0903730:three_prime_UTR 25.0%
! GAAGGATATGATATATATCA+AGG + chr6_2:1108705-1108724 None:intergenic 25.0%
!! ATGACTTATAAGATTTTGGA+AGG + chr6_2:1108723-1108742 None:intergenic 25.0%
! TTCCAAAATCTTATAAGTCA+TGG - chr6_2:1108722-1108741 Msa0903730:three_prime_UTR 25.0%
! ACCAAAAATCAAGATATAAG+AGG - chr6_2:1108754-1108773 Msa0903730:three_prime_UTR 25.0%
!! TTTAGGCTAAATTGCATTTT+TGG - chr6_2:1109597-1109616 Msa0903730:intron 25.0%
! GATACTACCTAAATAGTTAA+GGG + chr6_2:1109624-1109643 None:intergenic 25.0%
! TTGAATTAAAACTAACGGAA+AGG + chr6_2:1109854-1109873 None:intergenic 25.0%
!!! TTTTCTTCTGGAATTTTTCT+AGG - chr6_2:1109754-1109773 Msa0903730:intron 25.0%
!!! TTCTTGTTGTTAAAGGTTTA+TGG - chr6_2:1109778-1109797 Msa0903730:intron 25.0%
! ATGATATGAAGATGAAAAAG+AGG - chr6_2:1109803-1109822 Msa0903730:intron 25.0%
! CGATACTACATAAATAGTTA+AGG - chr6_2:1109944-1109963 Msa0903730:intron 25.0%
!! AAAAACGTAGACGATTTTAT+TGG + chr6_2:1110147-1110166 None:intergenic 25.0%
! ACAAATTGGAACAATCTTAT+AGG - chr6_2:1110297-1110316 Msa0903730:intron 25.0%
! TAGCTAGTAAAAAAATGGTT+TGG - chr6_2:1110448-1110467 Msa0903730:intron 25.0%
! TAAACAAGAAAAAACACAGA+GGG + chr6_2:1110819-1110838 None:intergenic 25.0%
! ATAAACAAGAAAAAACACAG+AGG + chr6_2:1110820-1110839 None:intergenic 25.0%
!!! AACTGCAACAAGTTTTTTTA+CGG + chr6_2:1110911-1110930 None:intergenic 25.0%
!!! AAAAAAACTTGTTGCAGTTT+TGG - chr6_2:1110912-1110931 Msa0903730:intron 25.0%
! ATCGTAAACTAGTGAAAATA+TGG + chr6_2:1110941-1110960 None:intergenic 25.0%
!!! TTTTCACTAGTTTACGATAT+TGG - chr6_2:1110943-1110962 Msa0903730:intron 25.0%
! ATAAAGTGATCGATCAAAAT+TGG + chr6_2:1111135-1111154 None:intergenic 25.0%
!! GATCGATCACTTTATTTATT+AGG - chr6_2:1111140-1111159 Msa0903730:intron 25.0%
!! ATTAGGCTTAATTGCAATTT+TGG - chr6_2:1111157-1111176 Msa0903730:intron 25.0%
!! TGTGACTTTCTATTTTCTTA+GGG + chr6_2:1111216-1111235 None:intergenic 25.0%
!! ATGTGACTTTCTATTTTCTT+AGG + chr6_2:1111217-1111236 None:intergenic 25.0%
!!! AGTTTTGTCAGGTTTTAAAA+GGG + chr6_2:1113221-1113240 None:intergenic 25.0%
! TGTCAAAAAATGATAACTGA+AGG + chr6_2:1113195-1113214 None:intergenic 25.0%
!!! TGTATTTTTTCCCTTATTCT+CGG - chr6_2:1111953-1111972 Msa0903730:intron 25.0%
!!! CATATTTTTTCCCTTATTCT+CGG - chr6_2:1112096-1112115 Msa0903730:intron 25.0%
! TACTAATATGTGAGAAACTT+TGG - chr6_2:1112198-1112217 Msa0903730:intron 25.0%
!!! CATATTTTTTCCCTTATTCT+CGG + chr6_2:1112096-1112115 None:intergenic 25.0%
! ATACATAAAAAACCTAAGCT+CGG + chr6_2:1112570-1112589 None:intergenic 25.0%
! TATAAATACACAAAAGTTCC+CGG + chr6_2:1112653-1112672 None:intergenic 25.0%
! GTATTTATAAACCGAGAATA+AGG - chr6_2:1112664-1112683 Msa0903730:intron 25.0%
!!! TGTATTTTTTCCCTTATTCT+CGG + chr6_2:1111953-1111972 None:intergenic 25.0%
! TGTCAAAAAATGATAACTGA+AGG - chr6_2:1113195-1113214 Msa0903730:intron 25.0%
!!! AGTTTTGTCAGGTTTTAAAA+GGG - chr6_2:1113221-1113240 Msa0903730:intron 25.0%
!! AAAAGGCTTAATTACACTTT+TGG + chr6_2:1113283-1113302 None:intergenic 25.0%
!! CTTGTCAAGTCAATATTTTT+AGG - chr6_2:1113404-1113423 Msa0903730:intron 25.0%
!!! TTTCAAGTTTAGTCTTTCTT+AGG - chr6_2:1113566-1113585 Msa0903730:intron 25.0%
!! AATGTGTTACTCAATATAAG+GGG + chr6_2:1113693-1113712 None:intergenic 25.0%
!! GAAATGTGTTACTCAATATA+AGG + chr6_2:1113695-1113714 None:intergenic 25.0%
! TATATTGAGTAACACATTTC+GGG - chr6_2:1113695-1113714 Msa0903730:intron 25.0%
! CTTTAGCATGAAACATTATT+TGG + chr6_2:1113784-1113803 None:intergenic 25.0%
! CAAATAATGTTTCATGCTAA+AGG - chr6_2:1113782-1113801 Msa0903730:intron 25.0%
!!! CTGTCTAAAATTGGTTTTAA+TGG - chr6_2:1113976-1113995 Msa0903730:three_prime_UTR 25.0%
!! AATTTTTATCGATGATCTGT+TGG + chr6_2:1114094-1114113 None:intergenic 25.0%
! ATCTAATAAGAAAGCAAGAT+TGG - chr6_2:1114400-1114419 Msa0903730:intron 25.0%
! AAGATGAGTACTTATATGTT+GGG + chr6_2:1114515-1114534 None:intergenic 25.0%
!! AAGAAAAAAGTATAAGCAAG+TGG + chr6_2:1114617-1114636 None:intergenic 25.0%
! TTAATTATAGGCCATGAATT+AGG - chr6_2:1114639-1114658 Msa0903730:intron 25.0%
! TAATTATAGGCCATGAATTA+GGG - chr6_2:1114640-1114659 Msa0903730:intron 25.0%
! TTCATGGAATTAATTATGTG+TGG - chr6_2:1115027-1115046 Msa0903730:intron 25.0%
!! CATTGTCCTTAATTTTCTTA+GGG + chr6_2:1115678-1115697 None:intergenic 25.0%
!! TCATTGTCCTTAATTTTCTT+AGG + chr6_2:1115679-1115698 None:intergenic 25.0%
! ATGTTTCATGTTATTATTGC+AGG - chr6_2:1115787-1115806 Msa0903730:CDS 25.0%
! ATGTTAATGAAGAATGTACA+AGG - chr6_2:1115854-1115873 Msa0903730:exon 25.0%
!! ATATGTTTTCAGTCATGTTA+TGG - chr6_2:1115898-1115917 Msa0903730:five_prime_UTR 25.0%
!! CAAAAAAAATGTCGGATTTT+AGG + chr6_2:1115952-1115971 None:intergenic 25.0%
!!! CTAAAATCCGACATTTTTTT+TGG - chr6_2:1115950-1115969 Msa0903730:five_prime_UTR 25.0%
! TAGATCTCCAAAAAAAATGT+CGG + chr6_2:1115960-1115979 None:intergenic 25.0%
!!! TGGAGATCTAAATTTTAGAA+AGG - chr6_2:1115970-1115989 Msa0903730:five_prime_UTR 25.0%
! TAAGATTTGACTGTAGAATT+TGG - chr6_2:1115994-1116013 Msa0903730:five_prime_UTR 25.0%
! GAATTTGGTAAATACAATTG+TGG - chr6_2:1116009-1116028 Msa0903730:five_prime_UTR 25.0%
!! ATATTTTGCATGACAAACAT+CGG + chr6_2:1116078-1116097 None:intergenic 25.0%
CAAAATAAGGTAGCTTAAGA+TGG + chr6_2:1108509-1108528 None:intergenic 30.0%
CAAGAAGAAGTGACAAAATA+AGG + chr6_2:1108522-1108541 None:intergenic 30.0%
!! CACTTCTTCTTGTTTCTATA+AGG - chr6_2:1108530-1108549 Msa0903730:three_prime_UTR 30.0%
! CTCCATGACTTATAAGATTT+TGG + chr6_2:1108727-1108746 None:intergenic 30.0%
! GCCTCTTATATCTTGATTTT+TGG + chr6_2:1108758-1108777 None:intergenic 30.0%
!! CTTATTTTCCTTTTGTTTGG+TGG + chr6_2:1108796-1108815 None:intergenic 30.0%
!! TGGCTTATTTTCCTTTTGTT+TGG + chr6_2:1108799-1108818 None:intergenic 30.0%
GCATTTCAACAAATAAGCTA+AGG - chr6_2:1109048-1109067 Msa0903730:intron 30.0%
TTGTGTGATATGTGTTTATG+TGG - chr6_2:1109166-1109185 Msa0903730:three_prime_UTR 30.0%
TCTGCAGATATATATGTTCT+CGG - chr6_2:1109294-1109313 Msa0903730:three_prime_UTR 30.0%
! GTAAAGGCTTCAAAGTTTTT+AGG - chr6_2:1109580-1109599 Msa0903730:intron 30.0%
! TTTTGGTCCCTTAACTATTT+AGG - chr6_2:1109614-1109633 Msa0903730:intron 30.0%
CGATACTACCTAAATAGTTA+AGG + chr6_2:1109625-1109644 None:intergenic 30.0%
! AGGTTTTCTTCATTTTCTTC+TGG - chr6_2:1109742-1109761 Msa0903730:intron 30.0%
!! TCTAGGATTCTTGTTGTTAA+AGG - chr6_2:1109771-1109790 Msa0903730:intron 30.0%
GAAATGACCAAAATGTGTAA+CGG - chr6_2:1109871-1109890 Msa0903730:intron 30.0%
CTATTTATGTAGTATCGCTT+TGG + chr6_2:1109941-1109960 None:intergenic 30.0%
TAATTAGAGTGAGGAATGAA+AGG - chr6_2:1110194-1110213 Msa0903730:three_prime_UTR 30.0%
! GAAAGGCTTATCAAATTTTC+AGG - chr6_2:1110211-1110230 Msa0903730:three_prime_UTR 30.0%
TTAACATAGGTGTTAACCAT+GGG + chr6_2:1110350-1110369 None:intergenic 30.0%
TTTAACATAGGTGTTAACCA+TGG + chr6_2:1110351-1110370 None:intergenic 30.0%
! ATTTTCTTGATCATTTGGCA+AGG + chr6_2:1110379-1110398 None:intergenic 30.0%
TATCAAAACATTGGAGATAG+TGG - chr6_2:1110399-1110418 Msa0903730:intron 30.0%
!!! CATCTTGTACTTGTTTTTGT+TGG + chr6_2:1110427-1110446 None:intergenic 30.0%
CAACAAAAACAAGTACAAGA+TGG - chr6_2:1110425-1110444 Msa0903730:intron 30.0%
GATGGTAGCTAGTAAAAAAA+TGG - chr6_2:1110443-1110462 Msa0903730:intron 30.0%
! TTGGAGTATTCATAAGTGTT+TGG - chr6_2:1110467-1110486 Msa0903730:intron 30.0%
TTGGTTAAAAGAACAAGTGT+TGG - chr6_2:1110486-1110505 Msa0903730:intron 30.0%
ATGGGATATTTAGGAAACAA+AGG - chr6_2:1110559-1110578 Msa0903730:intron 30.0%
TGCAAAAGGAGATAAACTTA+GGG + chr6_2:1111096-1111115 None:intergenic 30.0%
! TGACTTTCTATTTTCTTAGG+GGG + chr6_2:1111214-1111233 None:intergenic 30.0%
! GTGACTTTCTATTTTCTTAG+GGG + chr6_2:1111215-1111234 None:intergenic 30.0%
AGAAAATAGAAAGTCACATG+TGG - chr6_2:1111218-1111237 Msa0903730:intron 30.0%
!!! CAGTTTTGTCAGGTTTTAAA+AGG + chr6_2:1113220-1113239 None:intergenic 30.0%
!!! CTTTTAAAACCTGACAAAAC+TGG - chr6_2:1111420-1111439 Msa0903730:intron 30.0%
TGTATTTATAAACCGAGCTT+AGG + chr6_2:1112555-1112574 None:intergenic 30.0%
GGTCATACTATGGAAAATAA+TGG - chr6_2:1112341-1112360 Msa0903730:intron 30.0%
ACTATGGAAAATAATGGTGT+TGG - chr6_2:1112347-1112366 Msa0903730:intron 30.0%
TGTATTTATAAACCGAGCTT+AGG - chr6_2:1112555-1112574 Msa0903730:intron 30.0%
!!! CTTTTAAAACCTGACAAAAC+TGG + chr6_2:1111420-1111439 None:intergenic 30.0%
!!! CAGTTTTGTCAGGTTTTAAA+AGG - chr6_2:1113220-1113239 Msa0903730:intron 30.0%
TGATATTGGCACTTCATAAA+AGG + chr6_2:1113300-1113319 None:intergenic 30.0%
GTATCACAATCTTGTGATAT+TGG + chr6_2:1113314-1113333 None:intergenic 30.0%
! TTTAGGTTAAAAAATGGGAG+TGG - chr6_2:1113421-1113440 Msa0903730:intron 30.0%
TTAGGTTAAAAAATGGGAGT+GGG - chr6_2:1113422-1113441 Msa0903730:intron 30.0%
! ATATCTAATTTGCATGGACT+TGG + chr6_2:1113626-1113645 None:intergenic 30.0%
AAGTCCATGCAAATTAGATA+TGG - chr6_2:1113625-1113644 Msa0903730:intron 30.0%
! CAAACCATATCTAATTTGCA+TGG + chr6_2:1113632-1113651 None:intergenic 30.0%
! ATGTGTTACTCAATATAAGG+GGG + chr6_2:1113692-1113711 None:intergenic 30.0%
ATGAAAAAATTCCGGTTGAA+AGG - chr6_2:1114048-1114067 Msa0903730:CDS 30.0%
! TATGTAACAGTCGCATATTT+TGG - chr6_2:1114328-1114347 Msa0903730:CDS 30.0%
AATAAGAAAGCAAGATTGGA+AGG - chr6_2:1114404-1114423 Msa0903730:intron 30.0%
AGATGAGTACTTATATGTTG+GGG + chr6_2:1114514-1114533 None:intergenic 30.0%
GAAGATGAGTACTTATATGT+TGG + chr6_2:1114516-1114535 None:intergenic 30.0%
CAATTCAAATCCCTAATTCA+TGG + chr6_2:1114653-1114672 None:intergenic 30.0%
TTAGGGATTTGAATTGTCTA+TGG - chr6_2:1114657-1114676 Msa0903730:intron 30.0%
!! TCAGACGGTCTATATTTTAA+CGG - chr6_2:1114734-1114753 Msa0903730:intron 30.0%
AATCCAAATCTATGTAGTAG+AGG - chr6_2:1114883-1114902 Msa0903730:intron 30.0%
ATCCAAATCTATGTAGTAGA+GGG - chr6_2:1114884-1114903 Msa0903730:intron 30.0%
AACTAACAACATTCCTTTGA+TGG - chr6_2:1115255-1115274 Msa0903730:intron 30.0%
ACTAACAACATTCCTTTGAT+GGG - chr6_2:1115256-1115275 Msa0903730:intron 30.0%
TGTGATAGAATTCTATGGTA+TGG - chr6_2:1115284-1115303 Msa0903730:intron 30.0%
AGAATTCTATGGTATGGTAA+AGG - chr6_2:1115290-1115309 Msa0903730:CDS 30.0%
TGATTGGATTGCAAAATTGT+TGG + chr6_2:1115446-1115465 None:intergenic 30.0%
ATACACAACACTTACATGAT+TGG + chr6_2:1115462-1115481 None:intergenic 30.0%
CATTGGAAATTGATGAAAAG+TGG - chr6_2:1115552-1115571 Msa0903730:CDS 30.0%
GCAAAACCCTAAGAAAATTA+AGG - chr6_2:1115669-1115688 Msa0903730:intron 30.0%
TTTCATGTTATTATTGCAGG+AGG - chr6_2:1115790-1115809 Msa0903730:CDS 30.0%
CTTCATTAACATTGAAAGTG+AGG + chr6_2:1115846-1115865 None:intergenic 30.0%
TTTGGTAAATACAATTGTGG+TGG - chr6_2:1116012-1116031 Msa0903730:five_prime_UTR 30.0%
CAAAATAAGGTAGCTTAAGA+TGG + chr6_2:1108509-1108528 None:intergenic 30.0%
CAAGAAGAAGTGACAAAATA+AGG + chr6_2:1108522-1108541 None:intergenic 30.0%
!! CACTTCTTCTTGTTTCTATA+AGG - chr6_2:1108530-1108549 Msa0903730:three_prime_UTR 30.0%
! CTCCATGACTTATAAGATTT+TGG + chr6_2:1108727-1108746 None:intergenic 30.0%
! GCCTCTTATATCTTGATTTT+TGG + chr6_2:1108758-1108777 None:intergenic 30.0%
!! CTTATTTTCCTTTTGTTTGG+TGG + chr6_2:1108796-1108815 None:intergenic 30.0%
!! TGGCTTATTTTCCTTTTGTT+TGG + chr6_2:1108799-1108818 None:intergenic 30.0%
GCATTTCAACAAATAAGCTA+AGG - chr6_2:1109048-1109067 Msa0903730:intron 30.0%
TTGTGTGATATGTGTTTATG+TGG - chr6_2:1109166-1109185 Msa0903730:three_prime_UTR 30.0%
TCTGCAGATATATATGTTCT+CGG - chr6_2:1109294-1109313 Msa0903730:three_prime_UTR 30.0%
! GTAAAGGCTTCAAAGTTTTT+AGG - chr6_2:1109580-1109599 Msa0903730:intron 30.0%
! TTTTGGTCCCTTAACTATTT+AGG - chr6_2:1109614-1109633 Msa0903730:intron 30.0%
CGATACTACCTAAATAGTTA+AGG + chr6_2:1109625-1109644 None:intergenic 30.0%
! AGGTTTTCTTCATTTTCTTC+TGG - chr6_2:1109742-1109761 Msa0903730:intron 30.0%
!! TCTAGGATTCTTGTTGTTAA+AGG - chr6_2:1109771-1109790 Msa0903730:intron 30.0%
GAAATGACCAAAATGTGTAA+CGG - chr6_2:1109871-1109890 Msa0903730:intron 30.0%
CTATTTATGTAGTATCGCTT+TGG + chr6_2:1109941-1109960 None:intergenic 30.0%
TAATTAGAGTGAGGAATGAA+AGG - chr6_2:1110194-1110213 Msa0903730:three_prime_UTR 30.0%
! GAAAGGCTTATCAAATTTTC+AGG - chr6_2:1110211-1110230 Msa0903730:three_prime_UTR 30.0%
TTAACATAGGTGTTAACCAT+GGG + chr6_2:1110350-1110369 None:intergenic 30.0%
TTTAACATAGGTGTTAACCA+TGG + chr6_2:1110351-1110370 None:intergenic 30.0%
! ATTTTCTTGATCATTTGGCA+AGG + chr6_2:1110379-1110398 None:intergenic 30.0%
TATCAAAACATTGGAGATAG+TGG - chr6_2:1110399-1110418 Msa0903730:intron 30.0%
!!! CATCTTGTACTTGTTTTTGT+TGG + chr6_2:1110427-1110446 None:intergenic 30.0%
CAACAAAAACAAGTACAAGA+TGG - chr6_2:1110425-1110444 Msa0903730:intron 30.0%
GATGGTAGCTAGTAAAAAAA+TGG - chr6_2:1110443-1110462 Msa0903730:intron 30.0%
! TTGGAGTATTCATAAGTGTT+TGG - chr6_2:1110467-1110486 Msa0903730:intron 30.0%
TTGGTTAAAAGAACAAGTGT+TGG - chr6_2:1110486-1110505 Msa0903730:intron 30.0%
ATGGGATATTTAGGAAACAA+AGG - chr6_2:1110559-1110578 Msa0903730:intron 30.0%
TGCAAAAGGAGATAAACTTA+GGG + chr6_2:1111096-1111115 None:intergenic 30.0%
! TGACTTTCTATTTTCTTAGG+GGG + chr6_2:1111214-1111233 None:intergenic 30.0%
! GTGACTTTCTATTTTCTTAG+GGG + chr6_2:1111215-1111234 None:intergenic 30.0%
AGAAAATAGAAAGTCACATG+TGG - chr6_2:1111218-1111237 Msa0903730:intron 30.0%
!!! CAGTTTTGTCAGGTTTTAAA+AGG + chr6_2:1113220-1113239 None:intergenic 30.0%
!!! CTTTTAAAACCTGACAAAAC+TGG - chr6_2:1111420-1111439 Msa0903730:intron 30.0%
TGTATTTATAAACCGAGCTT+AGG + chr6_2:1112555-1112574 None:intergenic 30.0%
GGTCATACTATGGAAAATAA+TGG - chr6_2:1112341-1112360 Msa0903730:intron 30.0%
ACTATGGAAAATAATGGTGT+TGG - chr6_2:1112347-1112366 Msa0903730:intron 30.0%
TGTATTTATAAACCGAGCTT+AGG - chr6_2:1112555-1112574 Msa0903730:intron 30.0%
!!! CTTTTAAAACCTGACAAAAC+TGG + chr6_2:1111420-1111439 None:intergenic 30.0%
!!! CAGTTTTGTCAGGTTTTAAA+AGG - chr6_2:1113220-1113239 Msa0903730:intron 30.0%
TGATATTGGCACTTCATAAA+AGG + chr6_2:1113300-1113319 None:intergenic 30.0%
GTATCACAATCTTGTGATAT+TGG + chr6_2:1113314-1113333 None:intergenic 30.0%
! TTTAGGTTAAAAAATGGGAG+TGG - chr6_2:1113421-1113440 Msa0903730:intron 30.0%
TTAGGTTAAAAAATGGGAGT+GGG - chr6_2:1113422-1113441 Msa0903730:intron 30.0%
! ATATCTAATTTGCATGGACT+TGG + chr6_2:1113626-1113645 None:intergenic 30.0%
AAGTCCATGCAAATTAGATA+TGG - chr6_2:1113625-1113644 Msa0903730:intron 30.0%
! CAAACCATATCTAATTTGCA+TGG + chr6_2:1113632-1113651 None:intergenic 30.0%
! ATGTGTTACTCAATATAAGG+GGG + chr6_2:1113692-1113711 None:intergenic 30.0%
ATGAAAAAATTCCGGTTGAA+AGG - chr6_2:1114048-1114067 Msa0903730:CDS 30.0%
! TATGTAACAGTCGCATATTT+TGG - chr6_2:1114328-1114347 Msa0903730:CDS 30.0%
AATAAGAAAGCAAGATTGGA+AGG - chr6_2:1114404-1114423 Msa0903730:intron 30.0%
AGATGAGTACTTATATGTTG+GGG + chr6_2:1114514-1114533 None:intergenic 30.0%
GAAGATGAGTACTTATATGT+TGG + chr6_2:1114516-1114535 None:intergenic 30.0%
CAATTCAAATCCCTAATTCA+TGG + chr6_2:1114653-1114672 None:intergenic 30.0%
TTAGGGATTTGAATTGTCTA+TGG - chr6_2:1114657-1114676 Msa0903730:intron 30.0%
!! TCAGACGGTCTATATTTTAA+CGG - chr6_2:1114734-1114753 Msa0903730:intron 30.0%
AATCCAAATCTATGTAGTAG+AGG - chr6_2:1114883-1114902 Msa0903730:intron 30.0%
ATCCAAATCTATGTAGTAGA+GGG - chr6_2:1114884-1114903 Msa0903730:intron 30.0%
AACTAACAACATTCCTTTGA+TGG - chr6_2:1115255-1115274 Msa0903730:intron 30.0%
ACTAACAACATTCCTTTGAT+GGG - chr6_2:1115256-1115275 Msa0903730:intron 30.0%
TGTGATAGAATTCTATGGTA+TGG - chr6_2:1115284-1115303 Msa0903730:intron 30.0%
AGAATTCTATGGTATGGTAA+AGG - chr6_2:1115290-1115309 Msa0903730:CDS 30.0%
TGATTGGATTGCAAAATTGT+TGG + chr6_2:1115446-1115465 None:intergenic 30.0%
ATACACAACACTTACATGAT+TGG + chr6_2:1115462-1115481 None:intergenic 30.0%
CATTGGAAATTGATGAAAAG+TGG - chr6_2:1115552-1115571 Msa0903730:CDS 30.0%
GCAAAACCCTAAGAAAATTA+AGG - chr6_2:1115669-1115688 Msa0903730:intron 30.0%
TTTCATGTTATTATTGCAGG+AGG - chr6_2:1115790-1115809 Msa0903730:CDS 30.0%
CTTCATTAACATTGAAAGTG+AGG + chr6_2:1115846-1115865 None:intergenic 30.0%
TTTGGTAAATACAATTGTGG+TGG - chr6_2:1116012-1116031 Msa0903730:five_prime_UTR 30.0%
GATATAAGAGGCTATCCAAT+TGG - chr6_2:1108766-1108785 Msa0903730:three_prime_UTR 35.0%
AGATGAGAGTGATGAATATG+AGG - chr6_2:1108989-1109008 Msa0903730:intron 35.0%
GATGAGAGTGATGAATATGA+GGG - chr6_2:1108990-1109009 Msa0903730:intron 35.0%
AAATCTTTCCATTCAGTCAC+TGG - chr6_2:1109013-1109032 Msa0903730:intron 35.0%
ATCAAATTCCAGTGACTGAA+TGG + chr6_2:1109024-1109043 None:intergenic 35.0%
! TGTGGCTAAGCATATTTTTC+AGG - chr6_2:1109184-1109203 Msa0903730:three_prime_UTR 35.0%
! TCAGGATTTTTGTTGGTACT+TGG - chr6_2:1109202-1109221 Msa0903730:three_prime_UTR 35.0%
CTGCAGATATATATGTTCTC+GGG - chr6_2:1109295-1109314 Msa0903730:three_prime_UTR 35.0%
TTAATCTAACGGCCTACAAT+CGG + chr6_2:1109376-1109395 None:intergenic 35.0%
!!! GGACTCGTAGTTTTAAATTG+TGG - chr6_2:1109486-1109505 Msa0903730:intron 35.0%
CTATTTAGGTAGTATCGCTT+TGG - chr6_2:1109628-1109647 Msa0903730:intron 35.0%
GAAAGGACCAAAATGTGTAA+CGG + chr6_2:1109698-1109717 None:intergenic 35.0%
TTTGTCTACAACCTCAATTG+TGG + chr6_2:1110008-1110027 None:intergenic 35.0%
ATTACTGTTGAGGTCTTCAA+AGG + chr6_2:1110252-1110271 None:intergenic 35.0%
TTGAAGACCTCAACAGTAAT+AGG - chr6_2:1110252-1110271 Msa0903730:intron 35.0%
TGAAGACCTCAACAGTAATA+GGG - chr6_2:1110253-1110272 Msa0903730:intron 35.0%
! ACAACAAATTTGAGTTCCCA+TGG - chr6_2:1110331-1110350 Msa0903730:intron 35.0%
GGCAAGGATGAATTTAACAT+AGG + chr6_2:1110363-1110382 None:intergenic 35.0%
!! TGTGGTGTTATGGGATATTT+AGG - chr6_2:1110550-1110569 Msa0903730:intron 35.0%
TTTAGGAAACAAAGGTTGTG+TGG - chr6_2:1110567-1110586 Msa0903730:intron 35.0%
TTAGGAAACAAAGGTTGTGT+GGG - chr6_2:1110568-1110587 Msa0903730:intron 35.0%
! GGAGTTAGTATGTTGATTGA+AGG - chr6_2:1110589-1110608 Msa0903730:intron 35.0%
! TTGTAGCACATTTAGCTTCT+GGG - chr6_2:1110629-1110648 Msa0903730:intron 35.0%
! TTAGGAGAACATCTTTTCCT+AGG - chr6_2:1110701-1110720 Msa0903730:intron 35.0%
CATCATCCTCTAACAATCTT+AGG - chr6_2:1110733-1110752 Msa0903730:intron 35.0%
ATCGCAAAATTGTGGTACTT+AGG + chr6_2:1111038-1111057 None:intergenic 35.0%
CAAAAGGAGATAAACTTAGG+GGG + chr6_2:1111094-1111113 None:intergenic 35.0%
GCAAAAGGAGATAAACTTAG+GGG + chr6_2:1111095-1111114 None:intergenic 35.0%
GTGCAAAAGGAGATAAACTT+AGG + chr6_2:1111097-1111116 None:intergenic 35.0%
GCAAGATTGTGATACTTAAG+GGG + chr6_2:1111183-1111202 None:intergenic 35.0%
CGCAAGATTGTGATACTTAA+GGG + chr6_2:1111184-1111203 None:intergenic 35.0%
TCGCAAGATTGTGATACTTA+AGG + chr6_2:1111185-1111204 None:intergenic 35.0%
!! GTGTTAAGTATGCATTGACT+TGG - chr6_2:1111263-1111282 Msa0903730:intron 35.0%
!! TGCATTGACTTGGTCAAAAT+TGG - chr6_2:1111273-1111292 Msa0903730:intron 35.0%
! TTTACTCCCTTTTGCACTTT+TGG + chr6_2:1111307-1111326 None:intergenic 35.0%
CAAAAGGGAGTAAACTTAGA+GGG - chr6_2:1111313-1111332 Msa0903730:intron 35.0%
! GAAGGGCTTAATTACACTTT+TGG - chr6_2:1111359-1111378 Msa0903730:intron 35.0%
!! TTTTTGGAGGAAAAAATGGG+GGG + chr6_2:1111482-1111501 None:intergenic 35.0%
!! GTTTTTGGAGGAAAAAATGG+GGG + chr6_2:1111483-1111502 None:intergenic 35.0%
!! CGTTTTTGGAGGAAAAAATG+GGG + chr6_2:1111484-1111503 None:intergenic 35.0%
!! GCGTTTTTGGAGGAAAAAAT+GGG + chr6_2:1111485-1111504 None:intergenic 35.0%
!! AGCGTTTTTGGAGGAAAAAA+TGG + chr6_2:1111486-1111505 None:intergenic 35.0%
!!! TTTTTTTATTGGGGTACACG+TGG - chr6_2:1111595-1111614 Msa0903730:intron 35.0%
ATCAAATAGCGGTCATACTA+TGG - chr6_2:1112331-1112350 Msa0903730:intron 35.0%
CCATAATAGTCAATATCGGA+TGG + chr6_2:1112376-1112395 None:intergenic 35.0%
! CCATCCGATATTGACTATTA+TGG - chr6_2:1112373-1112392 Msa0903730:intron 35.0%
!!! TTTTTTTATTGGGGTACACG+TGG + chr6_2:1111595-1111614 None:intergenic 35.0%
!! AGCGTTTTTGGAGGAAAAAT+GGG - chr6_2:1113157-1113176 Msa0903730:intron 35.0%
TAAAAAATGGGAGTGGGAAT+TGG - chr6_2:1113428-1113447 Msa0903730:intron 35.0%
AATTAACTGCACTGCTATGT+TGG + chr6_2:1113539-1113558 None:intergenic 35.0%
ACATAGCAGTGCAGTTAATT+CGG - chr6_2:1113539-1113558 Msa0903730:intron 35.0%
! TTTAGTCTTTCTTAGGTAGC+AGG - chr6_2:1113573-1113592 Msa0903730:intron 35.0%
AATTTGCATGGACTTGGATT+TGG + chr6_2:1113620-1113639 None:intergenic 35.0%
! TGTGTTACTCAATATAAGGG+GGG + chr6_2:1113691-1113710 None:intergenic 35.0%
! TTATACTAGAGTACTAGGCT+AGG + chr6_2:1113759-1113778 None:intergenic 35.0%
! TGGACTTATACTAGAGTACT+AGG + chr6_2:1113764-1113783 None:intergenic 35.0%
!!! AACAGTCGCATATTTTGGTT+TGG - chr6_2:1114333-1114352 Msa0903730:CDS 35.0%
!!! ACAGTCGCATATTTTGGTTT+GGG - chr6_2:1114334-1114353 Msa0903730:CDS 35.0%
TTATTAGATGCCTAGCTAGA+TGG + chr6_2:1114389-1114408 None:intergenic 35.0%
CTTCAAAAAGAGTTAGCAGA+AGG - chr6_2:1114447-1114466 Msa0903730:intron 35.0%
TCCACTAGCAATATCTATTG+TGG - chr6_2:1114534-1114553 Msa0903730:intron 35.0%
ACCACAATAGATATTGCTAG+TGG + chr6_2:1114538-1114557 None:intergenic 35.0%
ACTAGCAATATCTATTGTGG+TGG - chr6_2:1114537-1114556 Msa0903730:intron 35.0%
! CATTCAGATAGCCAATGTTT+TGG + chr6_2:1114842-1114861 None:intergenic 35.0%
! AAACATTGGCTATCTGAATG+TGG - chr6_2:1114842-1114861 Msa0903730:intron 35.0%
! AACATTGGCTATCTGAATGT+GGG - chr6_2:1114843-1114862 Msa0903730:intron 35.0%
TACCCTCTACTACATAGATT+TGG + chr6_2:1114889-1114908 None:intergenic 35.0%
CTAACAACATTCCTTTGATG+GGG - chr6_2:1115257-1115276 Msa0903730:intron 35.0%
TGGATTGCAAAATTGTTGGA+GGG + chr6_2:1115442-1115461 None:intergenic 35.0%
TTGGATTGCAAAATTGTTGG+AGG + chr6_2:1115443-1115462 None:intergenic 35.0%
CTTCTTAACTAGTGCTCTTA+GGG + chr6_2:1115514-1115533 None:intergenic 35.0%
TCTTCTTAACTAGTGCTCTT+AGG + chr6_2:1115515-1115534 None:intergenic 35.0%
TTTGCTAACCAGTATCCTAA+GGG + chr6_2:1115654-1115673 None:intergenic 35.0%
! TTTTGCTAACCAGTATCCTA+AGG + chr6_2:1115655-1115674 None:intergenic 35.0%
GATATAAGAGGCTATCCAAT+TGG - chr6_2:1108766-1108785 Msa0903730:three_prime_UTR 35.0%
AGATGAGAGTGATGAATATG+AGG - chr6_2:1108989-1109008 Msa0903730:intron 35.0%
GATGAGAGTGATGAATATGA+GGG - chr6_2:1108990-1109009 Msa0903730:intron 35.0%
AAATCTTTCCATTCAGTCAC+TGG - chr6_2:1109013-1109032 Msa0903730:intron 35.0%
ATCAAATTCCAGTGACTGAA+TGG + chr6_2:1109024-1109043 None:intergenic 35.0%
! TGTGGCTAAGCATATTTTTC+AGG - chr6_2:1109184-1109203 Msa0903730:three_prime_UTR 35.0%
! TCAGGATTTTTGTTGGTACT+TGG - chr6_2:1109202-1109221 Msa0903730:three_prime_UTR 35.0%
CTGCAGATATATATGTTCTC+GGG - chr6_2:1109295-1109314 Msa0903730:three_prime_UTR 35.0%
TTAATCTAACGGCCTACAAT+CGG + chr6_2:1109376-1109395 None:intergenic 35.0%
!!! GGACTCGTAGTTTTAAATTG+TGG - chr6_2:1109486-1109505 Msa0903730:intron 35.0%
CTATTTAGGTAGTATCGCTT+TGG - chr6_2:1109628-1109647 Msa0903730:intron 35.0%
GAAAGGACCAAAATGTGTAA+CGG + chr6_2:1109698-1109717 None:intergenic 35.0%
TTTGTCTACAACCTCAATTG+TGG + chr6_2:1110008-1110027 None:intergenic 35.0%
ATTACTGTTGAGGTCTTCAA+AGG + chr6_2:1110252-1110271 None:intergenic 35.0%
TTGAAGACCTCAACAGTAAT+AGG - chr6_2:1110252-1110271 Msa0903730:intron 35.0%
TGAAGACCTCAACAGTAATA+GGG - chr6_2:1110253-1110272 Msa0903730:intron 35.0%
! ACAACAAATTTGAGTTCCCA+TGG - chr6_2:1110331-1110350 Msa0903730:intron 35.0%
GGCAAGGATGAATTTAACAT+AGG + chr6_2:1110363-1110382 None:intergenic 35.0%
!! TGTGGTGTTATGGGATATTT+AGG - chr6_2:1110550-1110569 Msa0903730:intron 35.0%
TTTAGGAAACAAAGGTTGTG+TGG - chr6_2:1110567-1110586 Msa0903730:intron 35.0%
TTAGGAAACAAAGGTTGTGT+GGG - chr6_2:1110568-1110587 Msa0903730:intron 35.0%
! GGAGTTAGTATGTTGATTGA+AGG - chr6_2:1110589-1110608 Msa0903730:intron 35.0%
! TTGTAGCACATTTAGCTTCT+GGG - chr6_2:1110629-1110648 Msa0903730:intron 35.0%
! TTAGGAGAACATCTTTTCCT+AGG - chr6_2:1110701-1110720 Msa0903730:intron 35.0%
CATCATCCTCTAACAATCTT+AGG - chr6_2:1110733-1110752 Msa0903730:intron 35.0%
ATCGCAAAATTGTGGTACTT+AGG + chr6_2:1111038-1111057 None:intergenic 35.0%
CAAAAGGAGATAAACTTAGG+GGG + chr6_2:1111094-1111113 None:intergenic 35.0%
GCAAAAGGAGATAAACTTAG+GGG + chr6_2:1111095-1111114 None:intergenic 35.0%
GTGCAAAAGGAGATAAACTT+AGG + chr6_2:1111097-1111116 None:intergenic 35.0%
GCAAGATTGTGATACTTAAG+GGG + chr6_2:1111183-1111202 None:intergenic 35.0%
CGCAAGATTGTGATACTTAA+GGG + chr6_2:1111184-1111203 None:intergenic 35.0%
TCGCAAGATTGTGATACTTA+AGG + chr6_2:1111185-1111204 None:intergenic 35.0%
!! GTGTTAAGTATGCATTGACT+TGG - chr6_2:1111263-1111282 Msa0903730:intron 35.0%
!! TGCATTGACTTGGTCAAAAT+TGG - chr6_2:1111273-1111292 Msa0903730:intron 35.0%
! TTTACTCCCTTTTGCACTTT+TGG + chr6_2:1111307-1111326 None:intergenic 35.0%
CAAAAGGGAGTAAACTTAGA+GGG - chr6_2:1111313-1111332 Msa0903730:intron 35.0%
! GAAGGGCTTAATTACACTTT+TGG - chr6_2:1111359-1111378 Msa0903730:intron 35.0%
!! TTTTTGGAGGAAAAAATGGG+GGG + chr6_2:1111482-1111501 None:intergenic 35.0%
!! GTTTTTGGAGGAAAAAATGG+GGG + chr6_2:1111483-1111502 None:intergenic 35.0%
!! CGTTTTTGGAGGAAAAAATG+GGG + chr6_2:1111484-1111503 None:intergenic 35.0%
!! GCGTTTTTGGAGGAAAAAAT+GGG + chr6_2:1111485-1111504 None:intergenic 35.0%
!! AGCGTTTTTGGAGGAAAAAA+TGG + chr6_2:1111486-1111505 None:intergenic 35.0%
!!! TTTTTTTATTGGGGTACACG+TGG - chr6_2:1111595-1111614 Msa0903730:intron 35.0%
ATCAAATAGCGGTCATACTA+TGG - chr6_2:1112331-1112350 Msa0903730:intron 35.0%
CCATAATAGTCAATATCGGA+TGG + chr6_2:1112376-1112395 None:intergenic 35.0%
! CCATCCGATATTGACTATTA+TGG - chr6_2:1112373-1112392 Msa0903730:intron 35.0%
!!! TTTTTTTATTGGGGTACACG+TGG + chr6_2:1111595-1111614 None:intergenic 35.0%
!! AGCGTTTTTGGAGGAAAAAT+GGG - chr6_2:1113157-1113176 Msa0903730:intron 35.0%
TAAAAAATGGGAGTGGGAAT+TGG - chr6_2:1113428-1113447 Msa0903730:intron 35.0%
AATTAACTGCACTGCTATGT+TGG + chr6_2:1113539-1113558 None:intergenic 35.0%
ACATAGCAGTGCAGTTAATT+CGG - chr6_2:1113539-1113558 Msa0903730:intron 35.0%
! TTTAGTCTTTCTTAGGTAGC+AGG - chr6_2:1113573-1113592 Msa0903730:intron 35.0%
AATTTGCATGGACTTGGATT+TGG + chr6_2:1113620-1113639 None:intergenic 35.0%
! TGTGTTACTCAATATAAGGG+GGG + chr6_2:1113691-1113710 None:intergenic 35.0%
! TTATACTAGAGTACTAGGCT+AGG + chr6_2:1113759-1113778 None:intergenic 35.0%
! TGGACTTATACTAGAGTACT+AGG + chr6_2:1113764-1113783 None:intergenic 35.0%
!!! AACAGTCGCATATTTTGGTT+TGG - chr6_2:1114333-1114352 Msa0903730:CDS 35.0%
!!! ACAGTCGCATATTTTGGTTT+GGG - chr6_2:1114334-1114353 Msa0903730:CDS 35.0%
TTATTAGATGCCTAGCTAGA+TGG + chr6_2:1114389-1114408 None:intergenic 35.0%
CTTCAAAAAGAGTTAGCAGA+AGG - chr6_2:1114447-1114466 Msa0903730:intron 35.0%
TCCACTAGCAATATCTATTG+TGG - chr6_2:1114534-1114553 Msa0903730:intron 35.0%
ACCACAATAGATATTGCTAG+TGG + chr6_2:1114538-1114557 None:intergenic 35.0%
ACTAGCAATATCTATTGTGG+TGG - chr6_2:1114537-1114556 Msa0903730:intron 35.0%
! CATTCAGATAGCCAATGTTT+TGG + chr6_2:1114842-1114861 None:intergenic 35.0%
! AAACATTGGCTATCTGAATG+TGG - chr6_2:1114842-1114861 Msa0903730:intron 35.0%
! AACATTGGCTATCTGAATGT+GGG - chr6_2:1114843-1114862 Msa0903730:intron 35.0%
TACCCTCTACTACATAGATT+TGG + chr6_2:1114889-1114908 None:intergenic 35.0%
CTAACAACATTCCTTTGATG+GGG - chr6_2:1115257-1115276 Msa0903730:intron 35.0%
TGGATTGCAAAATTGTTGGA+GGG + chr6_2:1115442-1115461 None:intergenic 35.0%
TTGGATTGCAAAATTGTTGG+AGG + chr6_2:1115443-1115462 None:intergenic 35.0%
CTTCTTAACTAGTGCTCTTA+GGG + chr6_2:1115514-1115533 None:intergenic 35.0%
TCTTCTTAACTAGTGCTCTT+AGG + chr6_2:1115515-1115534 None:intergenic 35.0%
TTTGCTAACCAGTATCCTAA+GGG + chr6_2:1115654-1115673 None:intergenic 35.0%
! TTTTGCTAACCAGTATCCTA+AGG + chr6_2:1115655-1115674 None:intergenic 35.0%
AAGGTAGCTTAAGATGGAGT+TGG + chr6_2:1108503-1108522 None:intergenic 40.0%
! TAGTGTGTTTGTGACTTGCA+TGG - chr6_2:1108668-1108687 Msa0903730:three_prime_UTR 40.0%
!! TTGTTTGGTGGTGAACCAAT+TGG + chr6_2:1108784-1108803 None:intergenic 40.0%
TTGGTTCACCACCAAACAAA+AGG - chr6_2:1108785-1108804 Msa0903730:intron 40.0%
!! TAGCTGTTGATTTGGATGAG+TGG - chr6_2:1109256-1109275 Msa0903730:three_prime_UTR 40.0%
ATAGTTAGATTCTCCGCAGT+CGG - chr6_2:1109327-1109346 Msa0903730:intron 40.0%
! CAGTTGCGATCAAGTTGTAA+AGG - chr6_2:1109564-1109583 Msa0903730:intron 40.0%
! GTGTAACGGAGAGAAGTTAA+GGG + chr6_2:1109885-1109904 None:intergenic 40.0%
! TGTGTAACGGAGAGAAGTTA+AGG + chr6_2:1109884-1109903 None:intergenic 40.0%
! CTTCTCTCCGTTACACATTT+TGG - chr6_2:1109688-1109707 Msa0903730:intron 40.0%
! CTTCTCTCCGTTACACATTT+TGG + chr6_2:1109688-1109707 None:intergenic 40.0%
! TGTGTAACGGAGAGAAGTTA+AGG - chr6_2:1109884-1109903 Msa0903730:intron 40.0%
! GTGTAACGGAGAGAAGTTAA+GGG - chr6_2:1109885-1109904 Msa0903730:intron 40.0%
GTGGTTGCAGCATAAAAACT+TGG + chr6_2:1109989-1110008 None:intergenic 40.0%
TTATGCTGCAACCACAATTG+AGG - chr6_2:1109994-1110013 Msa0903730:intron 40.0%
TTGTAACGAGATTGCAGGTT+TGG + chr6_2:1110036-1110055 None:intergenic 40.0%
AGTCTTTGTAACGAGATTGC+AGG + chr6_2:1110041-1110060 None:intergenic 40.0%
TTTATGTTGCGACCGTAACT+AGG - chr6_2:1110070-1110089 Msa0903730:three_prime_UTR 40.0%
TTATGTTGCGACCGTAACTA+GGG - chr6_2:1110071-1110090 Msa0903730:three_prime_UTR 40.0%
!! ATTTTATTGGCCTCCGAGTA+GGG + chr6_2:1110134-1110153 None:intergenic 40.0%
GAAGACCTCAACAGTAATAG+GGG - chr6_2:1110254-1110273 Msa0903730:intron 40.0%
ATCCATCAGTGGCAACAAAT+TGG - chr6_2:1110283-1110302 Msa0903730:intron 40.0%
!! TTCCAATTTGTTGCCACTGA+TGG + chr6_2:1110288-1110307 None:intergenic 40.0%
! AGAGTTTGTTCAGTTGCATG+TGG - chr6_2:1110532-1110551 Msa0903730:intron 40.0%
! TTCAGTTGCATGTGGTGTTA+TGG - chr6_2:1110540-1110559 Msa0903730:intron 40.0%
!! TCAGTTGCATGTGGTGTTAT+GGG - chr6_2:1110541-1110560 Msa0903730:intron 40.0%
! GTTGTAGCACATTTAGCTTC+TGG - chr6_2:1110628-1110647 Msa0903730:intron 40.0%
! TGTAGCACATTTAGCTTCTG+GGG - chr6_2:1110630-1110649 Msa0903730:intron 40.0%
! TTAGCTTCTGGGGAAAAGAA+AGG - chr6_2:1110640-1110659 Msa0903730:intron 40.0%
AGAAAGGTGATGAAGGTAGA+AGG - chr6_2:1110656-1110675 Msa0903730:intron 40.0%
! GGATGATGTTTTGTGTTCCT+AGG + chr6_2:1110721-1110740 None:intergenic 40.0%
TCATGGCCTAAGATTGTTAG+AGG + chr6_2:1110742-1110761 None:intergenic 40.0%
GGTAGAGACAAACTTACTCA+TGG + chr6_2:1110759-1110778 None:intergenic 40.0%
GCAAAATTGTGGTACTTAGG+AGG + chr6_2:1111035-1111054 None:intergenic 40.0%
GGGTCAAAATCGCAAAATTG+TGG + chr6_2:1111046-1111065 None:intergenic 40.0%
! TCGATCAAAATTGGTCTGGA+GGG + chr6_2:1111126-1111145 None:intergenic 40.0%
! ATCGATCAAAATTGGTCTGG+AGG + chr6_2:1111127-1111146 None:intergenic 40.0%
GTGATCGATCAAAATTGGTC+TGG + chr6_2:1111130-1111149 None:intergenic 40.0%
CACCTCACTTTAAGTGATGT+GGG - chr6_2:1111241-1111260 Msa0903730:intron 40.0%
!! TGACTTGGTCAAAATTGGTC+TGG - chr6_2:1111278-1111297 Msa0903730:intron 40.0%
! GACTTGGTCAAAATTGGTCT+GGG - chr6_2:1111279-1111298 Msa0903730:intron 40.0%
! ACTTGGTCAAAATTGGTCTG+GGG - chr6_2:1111280-1111299 Msa0903730:intron 40.0%
GCAAAAGGGAGTAAACTTAG+AGG - chr6_2:1111312-1111331 Msa0903730:intron 40.0%
!!! TTGTCAGGTTTTAAAAGGGC+AGG + chr6_2:1113225-1113244 None:intergenic 40.0%
!! CAGCGTTTTTGGAGGAAAAA+TGG - chr6_2:1113156-1113175 Msa0903730:intron 40.0%
!! GCGTTTTTGGAGGAAAAATG+GGG - chr6_2:1113158-1113177 Msa0903730:intron 40.0%
!! CGTTTTTGGAGGAAAAATGG+GGG - chr6_2:1113159-1113178 Msa0903730:intron 40.0%
!! GTTTTTGGAGGAAAAATGGG+GGG - chr6_2:1113160-1113179 Msa0903730:intron 40.0%
!!! TTGTCAGGTTTTAAAAGGGC+AGG - chr6_2:1113225-1113244 Msa0903730:intron 40.0%
! TTTTAATGGTAAGGGTCTCG+AGG - chr6_2:1113990-1114009 Msa0903730:exon 40.0%
!!! CAGTCGCATATTTTGGTTTG+GGG - chr6_2:1114335-1114354 Msa0903730:CDS 40.0%
ACTTGAAAGACCATCTAGCT+AGG - chr6_2:1114376-1114395 Msa0903730:intron 40.0%
CAAAAAGAGTTAGCAGAAGG+TGG - chr6_2:1114450-1114469 Msa0903730:intron 40.0%
!! GTTTTTGAGGGTTGGAAAGA+AGG - chr6_2:1114474-1114493 Msa0903730:intron 40.0%
AGCAATATCTATTGTGGTGG+TGG - chr6_2:1114540-1114559 Msa0903730:intron 40.0%
TTTCTCCTGATCTAGTTGGA+AGG + chr6_2:1114566-1114585 None:intergenic 40.0%
! TGCTTTTCTCCTGATCTAGT+TGG + chr6_2:1114570-1114589 None:intergenic 40.0%
AAAAGCAAAGAACACCAGCA+TGG - chr6_2:1114583-1114602 Msa0903730:intron 40.0%
AAGTGGTTACTATACCATGC+TGG + chr6_2:1114600-1114619 None:intergenic 40.0%
CCAGTTGGATCAAAATCAGA+CGG - chr6_2:1114719-1114738 Msa0903730:intron 40.0%
!! TCAGATAGCCAATGTTTTGG+TGG + chr6_2:1114839-1114858 None:intergenic 40.0%
GCAGGTGTGATAGAATTCTA+TGG - chr6_2:1115279-1115298 Msa0903730:intron 40.0%
ATCATCCAGCAAAGAACTTG+TGG - chr6_2:1115403-1115422 Msa0903730:intron 40.0%
CATTTCCACAAGTTCTTTGC+TGG + chr6_2:1115411-1115430 None:intergenic 40.0%
CATTCTTACCTATTGCCCTT+AGG - chr6_2:1115636-1115655 Msa0903730:intron 40.0%
AAGGTAGCTTAAGATGGAGT+TGG + chr6_2:1108503-1108522 None:intergenic 40.0%
! TAGTGTGTTTGTGACTTGCA+TGG - chr6_2:1108668-1108687 Msa0903730:three_prime_UTR 40.0%
!! TTGTTTGGTGGTGAACCAAT+TGG + chr6_2:1108784-1108803 None:intergenic 40.0%
TTGGTTCACCACCAAACAAA+AGG - chr6_2:1108785-1108804 Msa0903730:intron 40.0%
!! TAGCTGTTGATTTGGATGAG+TGG - chr6_2:1109256-1109275 Msa0903730:three_prime_UTR 40.0%
ATAGTTAGATTCTCCGCAGT+CGG - chr6_2:1109327-1109346 Msa0903730:intron 40.0%
! CAGTTGCGATCAAGTTGTAA+AGG - chr6_2:1109564-1109583 Msa0903730:intron 40.0%
! GTGTAACGGAGAGAAGTTAA+GGG + chr6_2:1109885-1109904 None:intergenic 40.0%
! TGTGTAACGGAGAGAAGTTA+AGG + chr6_2:1109884-1109903 None:intergenic 40.0%
! CTTCTCTCCGTTACACATTT+TGG - chr6_2:1109688-1109707 Msa0903730:intron 40.0%
! CTTCTCTCCGTTACACATTT+TGG + chr6_2:1109688-1109707 None:intergenic 40.0%
! TGTGTAACGGAGAGAAGTTA+AGG - chr6_2:1109884-1109903 Msa0903730:intron 40.0%
! GTGTAACGGAGAGAAGTTAA+GGG - chr6_2:1109885-1109904 Msa0903730:intron 40.0%
GTGGTTGCAGCATAAAAACT+TGG + chr6_2:1109989-1110008 None:intergenic 40.0%
TTATGCTGCAACCACAATTG+AGG - chr6_2:1109994-1110013 Msa0903730:intron 40.0%
TTGTAACGAGATTGCAGGTT+TGG + chr6_2:1110036-1110055 None:intergenic 40.0%
AGTCTTTGTAACGAGATTGC+AGG + chr6_2:1110041-1110060 None:intergenic 40.0%
TTTATGTTGCGACCGTAACT+AGG - chr6_2:1110070-1110089 Msa0903730:three_prime_UTR 40.0%
TTATGTTGCGACCGTAACTA+GGG - chr6_2:1110071-1110090 Msa0903730:three_prime_UTR 40.0%
!! ATTTTATTGGCCTCCGAGTA+GGG + chr6_2:1110134-1110153 None:intergenic 40.0%
GAAGACCTCAACAGTAATAG+GGG - chr6_2:1110254-1110273 Msa0903730:intron 40.0%
ATCCATCAGTGGCAACAAAT+TGG - chr6_2:1110283-1110302 Msa0903730:intron 40.0%
!! TTCCAATTTGTTGCCACTGA+TGG + chr6_2:1110288-1110307 None:intergenic 40.0%
! AGAGTTTGTTCAGTTGCATG+TGG - chr6_2:1110532-1110551 Msa0903730:intron 40.0%
! TTCAGTTGCATGTGGTGTTA+TGG - chr6_2:1110540-1110559 Msa0903730:intron 40.0%
!! TCAGTTGCATGTGGTGTTAT+GGG - chr6_2:1110541-1110560 Msa0903730:intron 40.0%
! GTTGTAGCACATTTAGCTTC+TGG - chr6_2:1110628-1110647 Msa0903730:intron 40.0%
! TGTAGCACATTTAGCTTCTG+GGG - chr6_2:1110630-1110649 Msa0903730:intron 40.0%
! TTAGCTTCTGGGGAAAAGAA+AGG - chr6_2:1110640-1110659 Msa0903730:intron 40.0%
AGAAAGGTGATGAAGGTAGA+AGG - chr6_2:1110656-1110675 Msa0903730:intron 40.0%
! GGATGATGTTTTGTGTTCCT+AGG + chr6_2:1110721-1110740 None:intergenic 40.0%
TCATGGCCTAAGATTGTTAG+AGG + chr6_2:1110742-1110761 None:intergenic 40.0%
GGTAGAGACAAACTTACTCA+TGG + chr6_2:1110759-1110778 None:intergenic 40.0%
GCAAAATTGTGGTACTTAGG+AGG + chr6_2:1111035-1111054 None:intergenic 40.0%
GGGTCAAAATCGCAAAATTG+TGG + chr6_2:1111046-1111065 None:intergenic 40.0%
! TCGATCAAAATTGGTCTGGA+GGG + chr6_2:1111126-1111145 None:intergenic 40.0%
! ATCGATCAAAATTGGTCTGG+AGG + chr6_2:1111127-1111146 None:intergenic 40.0%
GTGATCGATCAAAATTGGTC+TGG + chr6_2:1111130-1111149 None:intergenic 40.0%
CACCTCACTTTAAGTGATGT+GGG - chr6_2:1111241-1111260 Msa0903730:intron 40.0%
!! TGACTTGGTCAAAATTGGTC+TGG - chr6_2:1111278-1111297 Msa0903730:intron 40.0%
! GACTTGGTCAAAATTGGTCT+GGG - chr6_2:1111279-1111298 Msa0903730:intron 40.0%
! ACTTGGTCAAAATTGGTCTG+GGG - chr6_2:1111280-1111299 Msa0903730:intron 40.0%
GCAAAAGGGAGTAAACTTAG+AGG - chr6_2:1111312-1111331 Msa0903730:intron 40.0%
!!! TTGTCAGGTTTTAAAAGGGC+AGG + chr6_2:1113225-1113244 None:intergenic 40.0%
!! CAGCGTTTTTGGAGGAAAAA+TGG - chr6_2:1113156-1113175 Msa0903730:intron 40.0%
!! GCGTTTTTGGAGGAAAAATG+GGG - chr6_2:1113158-1113177 Msa0903730:intron 40.0%
!! CGTTTTTGGAGGAAAAATGG+GGG - chr6_2:1113159-1113178 Msa0903730:intron 40.0%
!! GTTTTTGGAGGAAAAATGGG+GGG - chr6_2:1113160-1113179 Msa0903730:intron 40.0%
!!! TTGTCAGGTTTTAAAAGGGC+AGG - chr6_2:1113225-1113244 Msa0903730:intron 40.0%
! TTTTAATGGTAAGGGTCTCG+AGG - chr6_2:1113990-1114009 Msa0903730:exon 40.0%
!!! CAGTCGCATATTTTGGTTTG+GGG - chr6_2:1114335-1114354 Msa0903730:CDS 40.0%
ACTTGAAAGACCATCTAGCT+AGG - chr6_2:1114376-1114395 Msa0903730:intron 40.0%
CAAAAAGAGTTAGCAGAAGG+TGG - chr6_2:1114450-1114469 Msa0903730:intron 40.0%
!! GTTTTTGAGGGTTGGAAAGA+AGG - chr6_2:1114474-1114493 Msa0903730:intron 40.0%
AGCAATATCTATTGTGGTGG+TGG - chr6_2:1114540-1114559 Msa0903730:intron 40.0%
TTTCTCCTGATCTAGTTGGA+AGG + chr6_2:1114566-1114585 None:intergenic 40.0%
! TGCTTTTCTCCTGATCTAGT+TGG + chr6_2:1114570-1114589 None:intergenic 40.0%
AAAAGCAAAGAACACCAGCA+TGG - chr6_2:1114583-1114602 Msa0903730:intron 40.0%
AAGTGGTTACTATACCATGC+TGG + chr6_2:1114600-1114619 None:intergenic 40.0%
CCAGTTGGATCAAAATCAGA+CGG - chr6_2:1114719-1114738 Msa0903730:intron 40.0%
!! TCAGATAGCCAATGTTTTGG+TGG + chr6_2:1114839-1114858 None:intergenic 40.0%
GCAGGTGTGATAGAATTCTA+TGG - chr6_2:1115279-1115298 Msa0903730:intron 40.0%
ATCATCCAGCAAAGAACTTG+TGG - chr6_2:1115403-1115422 Msa0903730:intron 40.0%
CATTTCCACAAGTTCTTTGC+TGG + chr6_2:1115411-1115430 None:intergenic 40.0%
CATTCTTACCTATTGCCCTT+AGG - chr6_2:1115636-1115655 Msa0903730:intron 40.0%
GTTGGTACTTGGAATGTTGC+TGG - chr6_2:1109213-1109232 Msa0903730:three_prime_UTR 45.0%
! GGGAAGCTTAGCTGTTGATT+TGG - chr6_2:1109248-1109267 Msa0903730:three_prime_UTR 45.0%
GTGAACAAATGCTCCTGATG+CGG - chr6_2:1109532-1109551 Msa0903730:intron 45.0%
GTAGTCTGCAACCCTAGTTA+CGG + chr6_2:1110085-1110104 None:intergenic 45.0%
TACATAGGTTTGGCCCTACT+CGG - chr6_2:1110118-1110137 Msa0903730:three_prime_UTR 45.0%
!! GATTTTATTGGCCTCCGAGT+AGG + chr6_2:1110135-1110154 None:intergenic 45.0%
TTCTGCCCCTATTACTGTTG+AGG + chr6_2:1110262-1110281 None:intergenic 45.0%
GGGGAAAAGAAAGGTGATGA+AGG - chr6_2:1110649-1110668 Msa0903730:intron 45.0%
! TGGAGGGCTAAAAGTGCAAA+AGG + chr6_2:1111110-1111129 None:intergenic 45.0%
GCACCTCACTTTAAGTGATG+TGG - chr6_2:1111240-1111259 Msa0903730:intron 45.0%
CACCCACATCACTTAAAGTG+AGG + chr6_2:1111246-1111265 None:intergenic 45.0%
! CTTGGTCAAAATTGGTCTGG+GGG - chr6_2:1111281-1111300 Msa0903730:intron 45.0%
AGGGAGTAAACTTAGAGGGT+CGG - chr6_2:1111317-1111336 Msa0903730:intron 45.0%
GTTTGCCAAACTCGCGAAAT+TGG - chr6_2:1111390-1111409 Msa0903730:intron 45.0%
!! ACTGAAGGACCAGTTTTGTC+AGG + chr6_2:1113210-1113229 None:intergenic 45.0%
TTCCTCCAAAAACGCTGATG+TGG - chr6_2:1111490-1111509 Msa0903730:intron 45.0%
! ATGTGCCACATCAGCGTTTT+TGG + chr6_2:1113145-1113164 None:intergenic 45.0%
! ATGTGCCACATCAGCGTTTT+TGG - chr6_2:1113145-1113164 Msa0903730:intron 45.0%
TTCCTCCAAAAACGCTGATG+TGG + chr6_2:1111490-1111509 None:intergenic 45.0%
!! ACTGAAGGACCAGTTTTGTC+AGG - chr6_2:1113210-1113229 Msa0903730:intron 45.0%
GTTTGCCAAACTCGCGAAAT+TGG + chr6_2:1111390-1111409 None:intergenic 45.0%
!! AACACATTTCGGGTTTCTGC+TGG - chr6_2:1113705-1113724 Msa0903730:intron 45.0%
! AGCAGAAGGTGGAGTTTTTG+AGG - chr6_2:1114461-1114480 Msa0903730:intron 45.0%
! GCAGAAGGTGGAGTTTTTGA+GGG - chr6_2:1114462-1114481 Msa0903730:intron 45.0%
!! AAGGTGGAGTTTTTGAGGGT+TGG - chr6_2:1114466-1114485 Msa0903730:intron 45.0%
! GTTTGCACTTTTGTGCCAGT+TGG - chr6_2:1114704-1114723 Msa0903730:intron 45.0%
!! CCGTCTGATTTTGATCCAAC+TGG + chr6_2:1114722-1114741 None:intergenic 45.0%
!! TTCTGAGGCCACCAAAACAT+TGG - chr6_2:1114828-1114847 Msa0903730:intron 45.0%
ATGTGGGAATTTGTGACTGC+AGG - chr6_2:1114859-1114878 Msa0903730:intron 45.0%
!! GTAGAGAAGAGTGCTGAAAC+TGG + chr6_2:1115368-1115387 None:intergenic 45.0%
ACCTATTGCCCTTAGGATAC+TGG - chr6_2:1115643-1115662 Msa0903730:intron 45.0%
ACCAGTATCCTAAGGGCAAT+AGG + chr6_2:1115647-1115666 None:intergenic 45.0%
TTATTGCAGGAGGTGAGCAA+AGG - chr6_2:1115800-1115819 Msa0903730:CDS 45.0%
! ATTGTGGTGGAGACTGAAGA+TGG - chr6_2:1116025-1116044 Msa0903730:five_prime_UTR 45.0%
GTTGGTACTTGGAATGTTGC+TGG - chr6_2:1109213-1109232 Msa0903730:three_prime_UTR 45.0%
! GGGAAGCTTAGCTGTTGATT+TGG - chr6_2:1109248-1109267 Msa0903730:three_prime_UTR 45.0%
GTGAACAAATGCTCCTGATG+CGG - chr6_2:1109532-1109551 Msa0903730:intron 45.0%
GTAGTCTGCAACCCTAGTTA+CGG + chr6_2:1110085-1110104 None:intergenic 45.0%
TACATAGGTTTGGCCCTACT+CGG - chr6_2:1110118-1110137 Msa0903730:three_prime_UTR 45.0%
!! GATTTTATTGGCCTCCGAGT+AGG + chr6_2:1110135-1110154 None:intergenic 45.0%
TTCTGCCCCTATTACTGTTG+AGG + chr6_2:1110262-1110281 None:intergenic 45.0%
GGGGAAAAGAAAGGTGATGA+AGG - chr6_2:1110649-1110668 Msa0903730:intron 45.0%
! TGGAGGGCTAAAAGTGCAAA+AGG + chr6_2:1111110-1111129 None:intergenic 45.0%
GCACCTCACTTTAAGTGATG+TGG - chr6_2:1111240-1111259 Msa0903730:intron 45.0%
CACCCACATCACTTAAAGTG+AGG + chr6_2:1111246-1111265 None:intergenic 45.0%
! CTTGGTCAAAATTGGTCTGG+GGG - chr6_2:1111281-1111300 Msa0903730:intron 45.0%
AGGGAGTAAACTTAGAGGGT+CGG - chr6_2:1111317-1111336 Msa0903730:intron 45.0%
GTTTGCCAAACTCGCGAAAT+TGG - chr6_2:1111390-1111409 Msa0903730:intron 45.0%
!! ACTGAAGGACCAGTTTTGTC+AGG + chr6_2:1113210-1113229 None:intergenic 45.0%
TTCCTCCAAAAACGCTGATG+TGG - chr6_2:1111490-1111509 Msa0903730:intron 45.0%
! ATGTGCCACATCAGCGTTTT+TGG + chr6_2:1113145-1113164 None:intergenic 45.0%
! ATGTGCCACATCAGCGTTTT+TGG - chr6_2:1113145-1113164 Msa0903730:intron 45.0%
TTCCTCCAAAAACGCTGATG+TGG + chr6_2:1111490-1111509 None:intergenic 45.0%
!! ACTGAAGGACCAGTTTTGTC+AGG - chr6_2:1113210-1113229 Msa0903730:intron 45.0%
GTTTGCCAAACTCGCGAAAT+TGG + chr6_2:1111390-1111409 None:intergenic 45.0%
!! AACACATTTCGGGTTTCTGC+TGG - chr6_2:1113705-1113724 Msa0903730:intron 45.0%
! AGCAGAAGGTGGAGTTTTTG+AGG - chr6_2:1114461-1114480 Msa0903730:intron 45.0%
! GCAGAAGGTGGAGTTTTTGA+GGG - chr6_2:1114462-1114481 Msa0903730:intron 45.0%
!! AAGGTGGAGTTTTTGAGGGT+TGG - chr6_2:1114466-1114485 Msa0903730:intron 45.0%
! GTTTGCACTTTTGTGCCAGT+TGG - chr6_2:1114704-1114723 Msa0903730:intron 45.0%
!! CCGTCTGATTTTGATCCAAC+TGG + chr6_2:1114722-1114741 None:intergenic 45.0%
!! TTCTGAGGCCACCAAAACAT+TGG - chr6_2:1114828-1114847 Msa0903730:intron 45.0%
ATGTGGGAATTTGTGACTGC+AGG - chr6_2:1114859-1114878 Msa0903730:intron 45.0%
!! GTAGAGAAGAGTGCTGAAAC+TGG + chr6_2:1115368-1115387 None:intergenic 45.0%
ACCTATTGCCCTTAGGATAC+TGG - chr6_2:1115643-1115662 Msa0903730:intron 45.0%
ACCAGTATCCTAAGGGCAAT+AGG + chr6_2:1115647-1115666 None:intergenic 45.0%
TTATTGCAGGAGGTGAGCAA+AGG - chr6_2:1115800-1115819 Msa0903730:CDS 45.0%
! ATTGTGGTGGAGACTGAAGA+TGG - chr6_2:1116025-1116044 Msa0903730:five_prime_UTR 45.0%
!!! TATTTTTTATTTTTTTATTG+GGG - chr6_2:1111586-1111605 Msa0903730:intron 5.0%
!! AAAAAAATATTAAAAAACTA+AGG - chr6_2:1111627-1111646 Msa0903730:intron 5.0%
!! ATAAAAAAAATTAAAAATTC+TGG - chr6_2:1111728-1111747 Msa0903730:intron 5.0%
!! AAAAAAATATTAAAAAATTC+TGG - chr6_2:1111698-1111717 Msa0903730:intron 5.0%
!! ATTAATAAAAATGAAAAAAA+AGG - chr6_2:1111811-1111830 Msa0903730:intron 5.0%
!! ATTAATAAAAATGAAAAAAA+AGG + chr6_2:1111811-1111830 None:intergenic 5.0%
!! AAAAAAATATTAAAAAATTC+TGG + chr6_2:1111698-1111717 None:intergenic 5.0%
!!! TATTTTTTATTTTTTTATTG+GGG + chr6_2:1111586-1111605 None:intergenic 5.0%
!! AATATATCATAAAATATAAT+AGG - chr6_2:1115137-1115156 Msa0903730:intron 5.0%
!!! TATTTTTTATTTTTTTATTG+GGG - chr6_2:1111586-1111605 Msa0903730:intron 5.0%
!! AAAAAAATATTAAAAAACTA+AGG - chr6_2:1111627-1111646 Msa0903730:intron 5.0%
!! ATAAAAAAAATTAAAAATTC+TGG - chr6_2:1111728-1111747 Msa0903730:intron 5.0%
!! AAAAAAATATTAAAAAATTC+TGG - chr6_2:1111698-1111717 Msa0903730:intron 5.0%
!! ATTAATAAAAATGAAAAAAA+AGG - chr6_2:1111811-1111830 Msa0903730:intron 5.0%
!! ATTAATAAAAATGAAAAAAA+AGG + chr6_2:1111811-1111830 None:intergenic 5.0%
!! AAAAAAATATTAAAAAATTC+TGG + chr6_2:1111698-1111717 None:intergenic 5.0%
!!! TATTTTTTATTTTTTTATTG+GGG + chr6_2:1111586-1111605 None:intergenic 5.0%
!! AATATATCATAAAATATAAT+AGG - chr6_2:1115137-1115156 Msa0903730:intron 5.0%
TGTTGCTGGAAGATCTCCTG+TGG - chr6_2:1109227-1109246 Msa0903730:three_prime_UTR 50.0%
GTTGCTGGAAGATCTCCTGT+GGG - chr6_2:1109228-1109247 Msa0903730:three_prime_UTR 50.0%
TCAACAGCTAAGCTTCCCAC+AGG + chr6_2:1109246-1109265 None:intergenic 50.0%
AGCCGACTACAACCGATTGT+AGG - chr6_2:1109361-1109380 Msa0903730:intron 50.0%
GGCCTACAATCGGTTGTAGT+CGG + chr6_2:1109366-1109385 None:intergenic 50.0%
ACTGCAATTGAGACCGCATC+AGG + chr6_2:1109548-1109567 None:intergenic 50.0%
! TGGGGGCCAAAAGTGCAAAA+GGG - chr6_2:1111298-1111317 Msa0903730:intron 50.0%
CAGGACCAATTTCGCGAGTT+TGG + chr6_2:1113244-1113263 None:intergenic 50.0%
TGGAGGAAAAAATGGGGGGT+AGG + chr6_2:1111478-1111497 None:intergenic 50.0%
!! TGCCACATCAGCGTTTTTGG+AGG + chr6_2:1113148-1113167 None:intergenic 50.0%
AACGCTGATGTGGCACATGA+AGG - chr6_2:1111500-1111519 Msa0903730:intron 50.0%
AACGCTGATGTGGCACATGA+AGG + chr6_2:1111500-1111519 None:intergenic 50.0%
!! TGCCACATCAGCGTTTTTGG+AGG - chr6_2:1113148-1113167 Msa0903730:intron 50.0%
TTGGAGGAAAAATGGGGGGT+AGG - chr6_2:1113164-1113183 Msa0903730:intron 50.0%
CAGGACCAATTTCGCGAGTT+TGG - chr6_2:1113244-1113263 Msa0903730:intron 50.0%
GCAAGTTCTCGCCTTTCAAC+CGG + chr6_2:1114062-1114081 None:intergenic 50.0%
CACCCTCTAACATCGTTCTG+AGG - chr6_2:1114813-1114832 Msa0903730:intron 50.0%
GGCCTCAGAACGATGTTAGA+GGG + chr6_2:1114818-1114837 None:intergenic 50.0%
TGGCCTCAGAACGATGTTAG+AGG + chr6_2:1114819-1114838 None:intergenic 50.0%
CAACATTCCTTTGATGGGGC+AGG - chr6_2:1115261-1115280 Msa0903730:intron 50.0%
TATCACACCTGCCCCATCAA+AGG + chr6_2:1115271-1115290 None:intergenic 50.0%
TGTTGCTGGAAGATCTCCTG+TGG - chr6_2:1109227-1109246 Msa0903730:three_prime_UTR 50.0%
GTTGCTGGAAGATCTCCTGT+GGG - chr6_2:1109228-1109247 Msa0903730:three_prime_UTR 50.0%
TCAACAGCTAAGCTTCCCAC+AGG + chr6_2:1109246-1109265 None:intergenic 50.0%
AGCCGACTACAACCGATTGT+AGG - chr6_2:1109361-1109380 Msa0903730:intron 50.0%
GGCCTACAATCGGTTGTAGT+CGG + chr6_2:1109366-1109385 None:intergenic 50.0%
ACTGCAATTGAGACCGCATC+AGG + chr6_2:1109548-1109567 None:intergenic 50.0%
! TGGGGGCCAAAAGTGCAAAA+GGG - chr6_2:1111298-1111317 Msa0903730:intron 50.0%
CAGGACCAATTTCGCGAGTT+TGG + chr6_2:1113244-1113263 None:intergenic 50.0%
TGGAGGAAAAAATGGGGGGT+AGG + chr6_2:1111478-1111497 None:intergenic 50.0%
!! TGCCACATCAGCGTTTTTGG+AGG + chr6_2:1113148-1113167 None:intergenic 50.0%
AACGCTGATGTGGCACATGA+AGG - chr6_2:1111500-1111519 Msa0903730:intron 50.0%
AACGCTGATGTGGCACATGA+AGG + chr6_2:1111500-1111519 None:intergenic 50.0%
!! TGCCACATCAGCGTTTTTGG+AGG - chr6_2:1113148-1113167 Msa0903730:intron 50.0%
TTGGAGGAAAAATGGGGGGT+AGG - chr6_2:1113164-1113183 Msa0903730:intron 50.0%
CAGGACCAATTTCGCGAGTT+TGG - chr6_2:1113244-1113263 Msa0903730:intron 50.0%
GCAAGTTCTCGCCTTTCAAC+CGG + chr6_2:1114062-1114081 None:intergenic 50.0%
CACCCTCTAACATCGTTCTG+AGG - chr6_2:1114813-1114832 Msa0903730:intron 50.0%
GGCCTCAGAACGATGTTAGA+GGG + chr6_2:1114818-1114837 None:intergenic 50.0%
TGGCCTCAGAACGATGTTAG+AGG + chr6_2:1114819-1114838 None:intergenic 50.0%
CAACATTCCTTTGATGGGGC+AGG - chr6_2:1115261-1115280 Msa0903730:intron 50.0%
TATCACACCTGCCCCATCAA+AGG + chr6_2:1115271-1115290 None:intergenic 50.0%
CTGCTTCATGCAACCGACTG+CGG + chr6_2:1109343-1109362 None:intergenic 55.0%
ATAGGTTTGGCCCTACTCGG+AGG - chr6_2:1110121-1110140 Msa0903730:three_prime_UTR 55.0%
AGGGGCAGAAGATCCATCAG+TGG - chr6_2:1110272-1110291 Msa0903730:intron 55.0%
! CTGGGGGCCAAAAGTGCAAA+AGG - chr6_2:1111297-1111316 Msa0903730:intron 55.0%
CGCGAGTTTGGCAAACTACG+AGG + chr6_2:1113256-1113275 None:intergenic 55.0%
GTGGCACATGAAGGCCTATG+TGG - chr6_2:1111509-1111528 Msa0903730:intron 55.0%
GTCAGCAGTTTCTGCTGACG+TGG - chr6_2:1111540-1111559 Msa0903730:intron 55.0%
GTCAGCAGATTCTGCTGACG+TGG + chr6_2:1113103-1113122 None:intergenic 55.0%
GTGGCACATGAAGGCCTATG+TGG + chr6_2:1111509-1111528 None:intergenic 55.0%
CGCGAGTTTGGCAAACTACG+AGG - chr6_2:1113256-1113275 Msa0903730:intron 55.0%
GGTGGCCTTCCAACTAGATC+AGG - chr6_2:1114558-1114577 Msa0903730:intron 55.0%
CTGCTTCATGCAACCGACTG+CGG + chr6_2:1109343-1109362 None:intergenic 55.0%
ATAGGTTTGGCCCTACTCGG+AGG - chr6_2:1110121-1110140 Msa0903730:three_prime_UTR 55.0%
AGGGGCAGAAGATCCATCAG+TGG - chr6_2:1110272-1110291 Msa0903730:intron 55.0%
! CTGGGGGCCAAAAGTGCAAA+AGG - chr6_2:1111297-1111316 Msa0903730:intron 55.0%
CGCGAGTTTGGCAAACTACG+AGG + chr6_2:1113256-1113275 None:intergenic 55.0%
GTGGCACATGAAGGCCTATG+TGG - chr6_2:1111509-1111528 Msa0903730:intron 55.0%
GTCAGCAGTTTCTGCTGACG+TGG - chr6_2:1111540-1111559 Msa0903730:intron 55.0%
GTCAGCAGATTCTGCTGACG+TGG + chr6_2:1113103-1113122 None:intergenic 55.0%
GTGGCACATGAAGGCCTATG+TGG + chr6_2:1111509-1111528 None:intergenic 55.0%
CGCGAGTTTGGCAAACTACG+AGG - chr6_2:1113256-1113275 Msa0903730:intron 55.0%
GGTGGCCTTCCAACTAGATC+AGG - chr6_2:1114558-1114577 Msa0903730:intron 55.0%
GCTGACGTCGCGTGCCACAT+AGG + chr6_2:1113117-1113136 None:intergenic 65.0%
GCTGACGTCGCGTGCCACAT+AGG - chr6_2:1113117-1113136 Msa0903730:intron 65.0%
GCTGACGTCGCGTGCCACAT+AGG + chr6_2:1113117-1113136 None:intergenic 65.0%
GCTGACGTCGCGTGCCACAT+AGG - chr6_2:1113117-1113136 Msa0903730:intron 65.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 1108474 1116130 1108474 ID=Msa0903730;Name=Msa0903730
chr6_2 mRNA 1108474 1116130 1108474 ID=Msa0903730-mRNA-1;Parent=Msa0903730;Name=Msa0903730-mRNA-1;_AED=0.18;_eAED=0.18;_QI=267|1|1|1|0.71|0.75|8|987|222
chr6_2 exon 1108474 1108795 1108474 ID=Msa0903730-mRNA-1:exon:491;Parent=Msa0903730-mRNA-1
chr6_2 exon 1108898 1108946 1108898 ID=Msa0903730-mRNA-1:exon:490;Parent=Msa0903730-mRNA-1
chr6_2 exon 1109138 1109321 1109138 ID=Msa0903730-mRNA-1:exon:489;Parent=Msa0903730-mRNA-1
chr6_2 exon 1110000 1110266 1110000 ID=Msa0903730-mRNA-1:exon:488;Parent=Msa0903730-mRNA-1
chr6_2 exon 1113843 1114371 1113843 ID=Msa0903730-mRNA-1:exon:487;Parent=Msa0903730-mRNA-1
chr6_2 exon 1115288 1115398 1115288 ID=Msa0903730-mRNA-1:exon:486;Parent=Msa0903730-mRNA-1
chr6_2 exon 1115535 1115625 1115535 ID=Msa0903730-mRNA-1:exon:485;Parent=Msa0903730-mRNA-1
chr6_2 exon 1115761 1116130 1115761 ID=Msa0903730-mRNA-1:exon:484;Parent=Msa0903730-mRNA-1
chr6_2 five_prime_UTR 1115864 1116130 1115864 ID=Msa0903730-mRNA-1:five_prime_utr;Parent=Msa0903730-mRNA-1
chr6_2 CDS 1115761 1115863 1115761 ID=Msa0903730-mRNA-1:cds;Parent=Msa0903730-mRNA-1
chr6_2 CDS 1115535 1115625 1115535 ID=Msa0903730-mRNA-1:cds;Parent=Msa0903730-mRNA-1
chr6_2 CDS 1115288 1115398 1115288 ID=Msa0903730-mRNA-1:cds;Parent=Msa0903730-mRNA-1
chr6_2 CDS 1114008 1114371 1114008 ID=Msa0903730-mRNA-1:cds;Parent=Msa0903730-mRNA-1
chr6_2 three_prime_UTR 1113843 1114007 1113843 ID=Msa0903730-mRNA-1:three_prime_utr;Parent=Msa0903730-mRNA-1
chr6_2 three_prime_UTR 1110000 1110266 1110000 ID=Msa0903730-mRNA-1:three_prime_utr;Parent=Msa0903730-mRNA-1
chr6_2 three_prime_UTR 1109138 1109321 1109138 ID=Msa0903730-mRNA-1:three_prime_utr;Parent=Msa0903730-mRNA-1
chr6_2 three_prime_UTR 1108898 1108946 1108898 ID=Msa0903730-mRNA-1:three_prime_utr;Parent=Msa0903730-mRNA-1
chr6_2 three_prime_UTR 1108474 1108795 1108474 ID=Msa0903730-mRNA-1:three_prime_utr;Parent=Msa0903730-mRNA-1
Gene Sequence

>Msa0903730

ATGGAGTTGAAGAACCAAAAATCAAGATATAAGAGGCTATCCAATTGGTTCACCACCAAACAAAAGGAAAATAAGCCATCATTAAGTTTGTATGAAATTGAAGATATAGTTGAAGATGAGAGTGATGAATATGAGGGAAATCTTTCCATTCAGTCACTGGAATTTGATTCTTGCATTTCAACAAATAAGCTAAGGATTTTTGTTGGTACTTGGAATGTTGCTGGAAGATCTCCTGTGGGAAGCTTAGCTGTTGATTTGGATGAGTGGTTAAATCTCAAGAATTCTGCAGATATATATGTTCTCGGGTTTCAAGAGATTGTACCTTTGAAGACCTCAACAGTAATAGGGGCAGAAGATCCATCAGTGGCAACAAATTGGAACAATCTTATAGGAAAAACACTAAACAACAAATTTGAGTTCCCATGGTTAACACCTATGTTAAATTCATCCTTGCCAAATGATCAAGAAAATTATCAAAACATTGGAGATAGTGGAACCAACAAAAACAAGTACAAGATGGTAGCTAGTAAAAAAATGGTTTGGAGTATTCATAAGTGTTTGGTTAAAAGAACAAGTGTTGGAAAAATATTGTGTTTCAAATGTGAGAGTTTGTTCAGTTGCATGTGGTGTTATGGGATATTTAGGAAACAAAGGTTGTGTGGGAGTTAG

Protein sequence

>Msa0903730

MELKNQKSRYKRLSNWFTTKQKENKPSLSLYEIEDIVEDESDEYEGNLSIQSLEFDSCISTNKLRIFVGTWNVAGRSPVGSLAVDLDEWLNLKNSADIYVLGFQEIVPLKTSTVIGAEDPSVATNWNNLIGKTLNNKFEFPWLTPMLNSSLPNDQENYQNIGDSGTNKNKYKMVASKKMVWSIHKCLVKRTSVGKILCFKCESLFSCMWCYGIFRKQRLCGS*