AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1052580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1052580 MtrunA17_Chr7g0222731 95.771 875 31 2 1 874 1 870 0.0 1706
Msa1052580 MtrunA17_Chr3g0123501 58.865 423 135 4 88 510 51 434 3.08e-169 507
Msa1052580 MtrunA17_Chr8g0381371 55.628 462 137 6 57 496 33 448 3.04e-166 501
Msa1052580 MtrunA17_Chr4g0065631 31.944 144 97 1 180 323 40 182 9.65e-20 87.8
Msa1052580 MtrunA17_Chr8g0385841 34.483 145 90 2 179 319 732 875 4.17e-17 86.7
Msa1052580 MtrunA17_Chr3g0131721 33.103 145 92 2 179 319 676 819 4.84e-17 86.3
Msa1052580 MtrunA17_Chr5g0438601 31.852 135 85 2 183 317 53 180 4.86e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1052580 AT3G06110.2 34.028 144 94 1 176 319 23 165 1.95e-23 98.6
Msa1052580 AT3G06110.3 34.028 144 94 1 176 319 23 165 1.95e-23 98.6
Msa1052580 AT3G23610.4 32.653 147 98 1 175 321 48 193 4.25e-22 95.9
Msa1052580 AT3G23610.2 32.414 145 97 1 175 319 48 191 3.81e-21 92.8
Msa1052580 AT3G23610.5 32.639 144 96 1 175 318 48 190 5.42e-21 92.4
Msa1052580 AT3G23610.1 32.639 144 96 1 175 318 48 190 6.17e-21 92.0
Msa1052580 AT3G23610.3 32.639 144 96 1 175 318 48 190 1.09e-20 92.4
Msa1052580 AT3G06110.1 32.414 145 85 3 176 319 23 155 1.56e-19 87.0
Msa1052580 AT5G23720.2 32.414 145 93 2 179 319 621 764 2.67e-16 84.3
Msa1052580 AT5G23720.1 27.586 232 141 5 92 319 640 848 2.77e-16 84.3
Msa1052580 AT5G23720.3 27.586 232 141 5 92 319 631 839 2.83e-16 84.3
Msa1052580 AT2G04550.1 32.847 137 81 3 183 317 56 183 2.48e-12 68.6
Msa1052580 AT2G04550.3 34.711 121 68 3 183 301 56 167 6.07e-12 65.5

Find 241 sgRNAs with CRISPR-Local

Find 394 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAACATGATGAATGAAATT+TGG 0.117040 7_2:-21413253 None:intergenic
CTTTGTCTGCTTTGGATTCT+AGG 0.128713 7_2:+21414642 Msa1052580:CDS
AAATATTCTCATGTTATTTA+TGG 0.140350 7_2:+21418388 Msa1052580:three_prime_UTR
TGAAAGGTGAATTGGGATTT+TGG 0.172719 7_2:-21413200 None:intergenic
TAGGGTTCCGAGCAAGAATT+AGG 0.213778 7_2:+21413477 Msa1052580:five_prime_UTR
TCGAAATCGAAACAATTTAA+TGG 0.226951 7_2:-21413551 None:intergenic
GGGATTTCTAAAATAATAAT+TGG 0.227851 7_2:-21418574 None:intergenic
TCAAACTTGGTGGAAGAAAT+TGG 0.231100 7_2:-21413513 None:intergenic
TATTTGAAAGAGAAAGAAAT+TGG 0.231384 7_2:-21413368 None:intergenic
ACTGGTTGAGAACTATAATT+TGG 0.250958 7_2:-21415379 None:intergenic
CAAATTCCCGGAAAATGTTT+TGG 0.263012 7_2:+21413625 Msa1052580:CDS
TTGATTACTTTGAGGATGTT+AGG 0.266289 7_2:+21414321 Msa1052580:CDS
TACAATGGACTCTCATTAAA+TGG 0.266648 7_2:-21418312 None:intergenic
GAATTGGGAAAGAAAGAAAA+AGG 0.269984 7_2:-21413178 None:intergenic
CCTTCAGTAGATAGTTTATC+TGG 0.276754 7_2:+21415790 Msa1052580:CDS
GAACATGATGAATGAAATTT+GGG 0.278995 7_2:-21413252 None:intergenic
AGGTATTGCTGATCCGAATA+TGG 0.280862 7_2:+21414475 Msa1052580:CDS
TTCCTTCGGCGTTATATGTT+TGG 0.283380 7_2:+21414684 Msa1052580:CDS
GTGAGGAACCACGTTCGTTT+TGG 0.288504 7_2:+21414813 Msa1052580:CDS
CCTCTCCCACCAGGAGTAAT+AGG 0.297230 7_2:-21413918 None:intergenic
GGCATTTGGTGCAAATCATT+TGG 0.302469 7_2:+21415921 Msa1052580:CDS
AATTTCACCGATCCGAATTC+CGG 0.317202 7_2:+21413711 Msa1052580:CDS
CGAAATCGAAACAATTTAAT+GGG 0.321610 7_2:-21413550 None:intergenic
AGGATTTGCGGCGGCGGAAC+GGG 0.335561 7_2:-21413670 None:intergenic
GTTTCGATTTCGAATCGATT+TGG 0.341103 7_2:+21413561 Msa1052580:five_prime_UTR
CCACCATTATTCCTACTATC+AGG 0.342012 7_2:-21414053 None:intergenic
GGATCCGTCTTTGTCTGCTT+TGG 0.346747 7_2:+21414634 Msa1052580:CDS
GATTCGATTCATTACCTTGC+TGG 0.351500 7_2:-21417163 None:intergenic
TTGTTATTGCTTATCTTATG+TGG 0.354511 7_2:+21414402 Msa1052580:CDS
GCAGTTGACTGGAACAAAAT+TGG 0.360784 7_2:+21416087 Msa1052580:CDS
TCATCAATGCGACACCGTTT+TGG 0.361011 7_2:+21413431 Msa1052580:five_prime_UTR
AGGATCGATTATCATGATTA+AGG 0.361414 7_2:+21414787 Msa1052580:CDS
GATAGACAGCCTGATTTGAT+TGG 0.364391 7_2:+21416063 Msa1052580:CDS
GTGAATGAGCTAAGGGGAAG+TGG 0.365847 7_2:-21413144 None:intergenic
CATGCCACCTTTCAAATTCC+CGG 0.370480 7_2:+21413613 Msa1052580:CDS
GATAGGGAGTTCTTTCAAAC+TGG 0.379216 7_2:+21416014 Msa1052580:CDS
CGTTCAGCAATGGAAGTTGA+TGG 0.379234 7_2:-21415481 None:intergenic
GCATTTGGTGCAAATCATTT+GGG 0.381223 7_2:+21415922 Msa1052580:CDS
GCTCTTTGTTGAGAATGTAT+AGG 0.383451 7_2:+21414558 Msa1052580:CDS
TTAGAAAAGATTGAGGCATT+TGG 0.383736 7_2:+21415907 Msa1052580:CDS
CTCCAACTACTCTCTCTTGC+AGG 0.386094 7_2:-21415034 None:intergenic
TTGCCTTTGATGGACATGTC+TGG 0.387446 7_2:+21414854 Msa1052580:CDS
CGCAAATCCTTCCGGTGAAC+CGG 0.393028 7_2:+21413683 Msa1052580:CDS
AAAACGAGAGAGGAAGAATC+TGG 0.393317 7_2:-21415301 None:intergenic
CGACTGGAAGGAATAGTTGA+TGG 0.394521 7_2:-21415571 None:intergenic
ATTGCTAGAATCAGAAGAAA+TGG 0.397572 7_2:-21415251 None:intergenic
AACTGGATGCTTCACATGTT+CGG 0.398281 7_2:+21416031 Msa1052580:CDS
AATCCTGATAGTAGGAATAA+TGG 0.400129 7_2:+21414050 Msa1052580:CDS
AGTAATAGTAGTAATAATAA+TGG 0.400503 7_2:+21413984 Msa1052580:CDS
GAATCAGAAGAAATGGAATC+TGG 0.401454 7_2:-21415244 None:intergenic
TTTGTCTGCTTTGGATTCTA+GGG 0.403725 7_2:+21414643 Msa1052580:CDS
TCAGTATCTTCATCTTTGTC+TGG 0.404142 7_2:+21415334 Msa1052580:CDS
ATAGACAGCCTGATTTGATT+GGG 0.406982 7_2:+21416064 Msa1052580:CDS
CCACCACCACTGCCGGAATT+CGG 0.408779 7_2:-21413723 None:intergenic
GGCTCTAATTTGATTTCCCC+TGG 0.410061 7_2:+21417130 Msa1052580:CDS
ATTTGATTGGGGCAGTTGAC+TGG 0.410264 7_2:+21416076 Msa1052580:CDS
TACTCTCTCTTGCAGGAAGA+TGG 0.421748 7_2:-21415027 None:intergenic
AAGGATTTGCGGCGGCGGAA+CGG 0.421804 7_2:-21413671 None:intergenic
GACGGATCCGTCAACATCTT+CGG 0.422116 7_2:-21414620 None:intergenic
TGATTACTTTGAGGATGTTA+GGG 0.423136 7_2:+21414322 Msa1052580:CDS
TGTGCCTCCGTTTGCATCAT+CGG 0.425195 7_2:+21414988 Msa1052580:CDS
TGCTGTGACCTTGGCGTCAA+AGG 0.428961 7_2:-21413777 None:intergenic
GGATCGGTGAAATTCGATTC+CGG 0.429389 7_2:-21413702 None:intergenic
AAGCGAGTTCCGATGATATC+GGG 0.431247 7_2:+21413880 Msa1052580:CDS
AGTTGTTGCAGTGTCAGAAA+AGG 0.431769 7_2:+21414510 Msa1052580:CDS
TCCGCCGCCGCAAATCCTTC+CGG 0.433567 7_2:+21413675 Msa1052580:CDS
CCCTTGGTAATGATAACTTA+GGG 0.438101 7_2:-21415108 None:intergenic
AGAATAATAATCCTGATAGT+AGG 0.438363 7_2:+21414042 Msa1052580:CDS
TTACAATTCTGCTGTGACCT+TGG 0.441011 7_2:-21413786 None:intergenic
ATATCATCGGAACTCGCTTT+CGG 0.442175 7_2:-21413876 None:intergenic
AAAGCGAGTTCCGATGATAT+CGG 0.445061 7_2:+21413879 Msa1052580:CDS
CGGTTCACCGGAAGGATTTG+CGG 0.446551 7_2:-21413682 None:intergenic
GTTGCTGAACATGTTTATCT+TGG 0.448416 7_2:+21414125 Msa1052580:CDS
TGACAAGCGAAACCCATATT+CGG 0.448761 7_2:-21414488 None:intergenic
CCGAATTCCGGCAGTGGTGG+TGG 0.450748 7_2:+21413723 Msa1052580:CDS
GGTATTGCTGATCCGAATAT+GGG 0.453348 7_2:+21414476 Msa1052580:CDS
GACCTTGGCGTCAAAGGCGG+TGG 0.453467 7_2:-21413771 None:intergenic
ACTCCTGGTGGGAGAGGTAA+TGG 0.460370 7_2:+21413924 Msa1052580:CDS
GTGTTTGTTCATTGTTGTCA+AGG 0.460704 7_2:+21414359 Msa1052580:CDS
TGCCTTTGATGGACATGTCT+GGG 0.461962 7_2:+21414855 Msa1052580:CDS
TTCCTGCAAGAGAGAGTAGT+TGG 0.463033 7_2:+21415032 Msa1052580:CDS
TTCGAACCCTAATTCTTGCT+CGG 0.463128 7_2:-21413484 None:intergenic
TCAACTGCCCCAATCAAATC+AGG 0.464657 7_2:-21416072 None:intergenic
TAAGTATTGTGCGGCTATCA+TGG 0.465295 7_2:+21414712 Msa1052580:CDS
GAGGATGTTAGGGAAAAGAA+TGG 0.472600 7_2:+21414332 Msa1052580:CDS
GTTTATTGTGCACATTCCTT+CGG 0.473183 7_2:+21414670 Msa1052580:CDS
GAAGAAAGATTCAAACTTGG+TGG 0.474236 7_2:-21413523 None:intergenic
ACTTCATTCATAAATCGCTT+CGG 0.475888 7_2:+21413390 Msa1052580:five_prime_UTR
TGATGTGTTTGATTACTTTG+AGG 0.476178 7_2:+21414313 Msa1052580:CDS
CTCCACCGCCTTTGACGCCA+AGG 0.476639 7_2:+21413769 Msa1052580:CDS
ACCGGAAGGATTTGCGGCGG+CGG 0.476669 7_2:-21413676 None:intergenic
GAAATTCGATTCCGGTTCAC+CGG 0.477328 7_2:-21413694 None:intergenic
GCTGAACATGTTTATCTTGG+TGG 0.480796 7_2:+21414128 Msa1052580:CDS
CTTGGCGTCAAAGGCGGTGG+AGG 0.482350 7_2:-21413768 None:intergenic
AATGGTAATGGTAATGGTAA+TGG 0.486351 7_2:+21413942 Msa1052580:CDS
TTCGATTCCGGTTCACCGGA+AGG 0.488338 7_2:-21413690 None:intergenic
ACCGATCCGAATTCCGGCAG+TGG 0.489853 7_2:+21413717 Msa1052580:CDS
AACAAAGAGCTTGGACTAAG+TGG 0.490105 7_2:-21414545 None:intergenic
ACCCTTGGTAATGATAACTT+AGG 0.490670 7_2:-21415109 None:intergenic
GAGAGAAACTCCTTCACATC+AGG 0.491036 7_2:-21415082 None:intergenic
ATTTGAAAGAGAAAGAAATT+GGG 0.491092 7_2:-21413367 None:intergenic
AGAGGTAATGGTAATGGTAA+TGG 0.493942 7_2:+21413936 Msa1052580:CDS
AGGGTTCCGAGCAAGAATTA+GGG 0.495169 7_2:+21413478 Msa1052580:five_prime_UTR
TACATTCTCAACAAAGAGCT+TGG 0.497832 7_2:-21414554 None:intergenic
TCGGCGTTATATGTTTGGAT+TGG 0.499633 7_2:+21414689 Msa1052580:CDS
CTTGCATGCATATGTATGCT+TGG 0.499660 7_2:-21415973 None:intergenic
AATGAGAGTCCATTGTAGCT+TGG 0.500146 7_2:+21418318 Msa1052580:exon
CGGGAATTTGAAAGGTGGCA+TGG 0.502986 7_2:-21413612 None:intergenic
TGCTCGGAACCCTAGAAACT+AGG 0.504949 7_2:-21413468 None:intergenic
GCAATGAACCATCAGTTCTC+AGG 0.505417 7_2:+21415755 Msa1052580:CDS
GTTGTTGCAGTGTCAGAAAA+GGG 0.508525 7_2:+21414511 Msa1052580:CDS
CCCACGCTATCAGCAATGTC+TGG 0.508926 7_2:-21415730 None:intergenic
TGTTTGTTCATTGTTGTCAA+GGG 0.515447 7_2:+21414360 Msa1052580:CDS
ACTCTCTCTTGCAGGAAGAT+GGG 0.518329 7_2:-21415026 None:intergenic
TGCAAATCATTTGGGTTCAG+AGG 0.518719 7_2:+21415930 Msa1052580:CDS
GAGCAATCGAAAGCGGCTGA+AGG 0.519600 7_2:-21413833 None:intergenic
TGCACATATATAACATTGCA+AGG 0.520372 7_2:-21418595 None:intergenic
AAGGGATGCTAGAGGGGCTG+CGG 0.520478 7_2:+21414736 Msa1052580:CDS
TCTTGTTCCGAAGATGTTGA+CGG 0.520562 7_2:+21414613 Msa1052580:CDS
TCGAATCGATTTGGCATGGT+GGG 0.521287 7_2:+21413570 Msa1052580:exon
CCCTAAGTTATCATTACCAA+GGG 0.521837 7_2:+21415108 Msa1052580:CDS
ATGGAATCTGGAGAAACAAA+AGG 0.523568 7_2:-21415232 None:intergenic
ATCGAAAGCGGCTGAAGGGG+CGG 0.525187 7_2:-21413828 None:intergenic
TACAAAGTTTAGTATATCGC+TGG 0.526719 7_2:+21415878 Msa1052580:CDS
TTGAAGTCTGCATCATCAAA+GGG 0.527606 7_2:+21415820 Msa1052580:CDS
AGCAATCGAAAGCGGCTGAA+GGG 0.531267 7_2:-21413832 None:intergenic
TTTGAAGTCTGCATCATCAA+AGG 0.533322 7_2:+21415819 Msa1052580:CDS
GGGCTGCGGATCAGATTGTC+CGG 0.533827 7_2:+21414750 Msa1052580:CDS
GCAATGTCTGGACATGAAGC+TGG 0.534202 7_2:-21415718 None:intergenic
AAACGAGAGAGGAAGAATCT+GGG 0.536025 7_2:-21415300 None:intergenic
TCATGGAAAGGGATGCTAGA+GGG 0.536253 7_2:+21414729 Msa1052580:CDS
CCACAACCACCTATTACTCC+TGG 0.537279 7_2:+21413909 Msa1052580:CDS
AATCATAAGCCAAGCTACAA+TGG 0.538168 7_2:-21418327 None:intergenic
AGGATGTTAGGGAAAAGAAT+GGG 0.538950 7_2:+21414333 Msa1052580:CDS
GCAATCGAAAGCGGCTGAAG+GGG 0.539990 7_2:-21413831 None:intergenic
ATCAACTATTCCTTCCAGTC+GGG 0.542142 7_2:+21415573 Msa1052580:CDS
CCTATTACTCCTGGTGGGAG+AGG 0.542296 7_2:+21413918 Msa1052580:CDS
AAGGTCACAGCAGAATTGTA+AGG 0.544690 7_2:+21413788 Msa1052580:CDS
TGAATGAGCTAAGGGGAAGT+GGG 0.545882 7_2:-21413143 None:intergenic
TTTGAAGAAAGATTCAAACT+TGG 0.546725 7_2:-21413526 None:intergenic
GTGGTGGAGATAATACTAAC+CGG 0.548066 7_2:+21413739 Msa1052580:CDS
GCTTATCTTATGTGGAGGGA+AGG 0.549467 7_2:+21414410 Msa1052580:CDS
ATGGAATCTGAATAAACCCT+TGG 0.549789 7_2:-21415124 None:intergenic
ATTATCTCCACCACCACTGC+CGG 0.550629 7_2:-21413730 None:intergenic
ACTACCTCTGCGTTCAGCAA+TGG 0.550884 7_2:-21415491 None:intergenic
GGTGGGAGAGGTAATGGTAA+TGG 0.552609 7_2:+21413930 Msa1052580:CDS
TCCAGACATTGCTGATAGCG+TGG 0.553859 7_2:+21415729 Msa1052580:CDS
ATTTGCGGCGGCGGAACGGG+CGG 0.555854 7_2:-21413667 None:intergenic
GTTGACAACATTGACGGTGA+TGG 0.555931 7_2:-21415178 None:intergenic
GATCCGAATTCCGGCAGTGG+TGG 0.558814 7_2:+21413720 Msa1052580:CDS
AGAAACAAAAGGAGGTGAAG+AGG 0.559901 7_2:-21415221 None:intergenic
ATCCTTGCACTCTCTCATAC+CGG 0.560757 7_2:-21414769 None:intergenic
CTCCCAGACATGTCCATCAA+AGG 0.564021 7_2:-21414857 None:intergenic
GAGTCAGTTGACAACATTGA+CGG 0.564336 7_2:-21415184 None:intergenic
TTGTCTGCTTTGGATTCTAG+GGG 0.565145 7_2:+21414644 Msa1052580:CDS
ATAAGCGATACATTTAATGA+AGG 0.565150 7_2:-21418430 None:intergenic
AAGGCGGTGGAGGAAATCTC+CGG 0.565206 7_2:-21413758 None:intergenic
TCATTCTCCGATGATGCAAA+CGG 0.566987 7_2:-21414995 None:intergenic
AAATCACCTTTAAAATACTC+AGG 0.568354 7_2:-21414230 None:intergenic
ACACAGTTCCTGAGAACTGA+TGG 0.568539 7_2:-21415763 None:intergenic
AAATTCCTGTCCTGATGTGA+AGG 0.569689 7_2:+21415072 Msa1052580:CDS
GCTCTAATTTGATTTCCCCT+GGG 0.570205 7_2:+21417131 Msa1052580:CDS
GCCAAGTTTAGAAAAGATTG+AGG 0.571378 7_2:+21415900 Msa1052580:CDS
CTTATCTTATGTGGAGGGAA+GGG 0.572287 7_2:+21414411 Msa1052580:CDS
CAAAGATGAAGATACTGAGA+CGG 0.574070 7_2:-21415329 None:intergenic
TTTGAGTTGTGAATGAGCTA+AGG 0.574216 7_2:-21413152 None:intergenic
CATGGAAAGGGATGCTAGAG+GGG 0.574678 7_2:+21414730 Msa1052580:CDS
GCATCCACTTTCCTCTCACC+AGG 0.576849 7_2:-21414917 None:intergenic
TATTCTCATGTTATTTATGG+AGG 0.577700 7_2:+21418391 Msa1052580:three_prime_UTR
CCAGGAGTAATAGGTGGTTG+TGG 0.578018 7_2:-21413909 None:intergenic
ATTCCTTCCAGTCGGGAACA+TGG 0.579148 7_2:+21415580 Msa1052580:CDS
AAACTCCTTCACATCAGGAC+AGG 0.581663 7_2:-21415077 None:intergenic
TGGCCACTCCCCGATATCAT+CGG 0.582916 7_2:-21413889 None:intergenic
TTGTGCGGCTATCATGGAAA+GGG 0.583248 7_2:+21414718 Msa1052580:CDS
ATCTTCGGAACAAGATGCAA+AGG 0.584565 7_2:-21414605 None:intergenic
TTATTGCTTATCTTATGTGG+AGG 0.584840 7_2:+21414405 Msa1052580:CDS
CATCAACTATTCCTTCCAGT+CGG 0.585320 7_2:+21415572 Msa1052580:CDS
CCCCTAAGTTATCATTACCA+AGG 0.586855 7_2:+21415107 Msa1052580:CDS
GTAGTAATAATAATGGTGAA+AGG 0.588930 7_2:+21413991 Msa1052580:CDS
CTCGCCGGAGTTTAGATGAG+TGG 0.589080 7_2:+21413853 Msa1052580:CDS
ACAAGATGCAAAGGATCATA+CGG 0.589777 7_2:-21414596 None:intergenic
ATTGTTGTCAAGGGGTGTCG+AGG 0.590797 7_2:+21414369 Msa1052580:CDS
CCAGATAAACTATCTACTGA+AGG 0.592515 7_2:-21415790 None:intergenic
GATTTCGAATCGATTTGGCA+TGG 0.593438 7_2:+21413566 Msa1052580:exon
TCGATTATCATGATTAAGGA+AGG 0.594375 7_2:+21414791 Msa1052580:CDS
TTCAGAAAAGCCATCGTGGG+AGG 0.595501 7_2:+21414962 Msa1052580:CDS
TATTGCTTATCTTATGTGGA+GGG 0.595972 7_2:+21414406 Msa1052580:CDS
GTTTGTTCATTGTTGTCAAG+GGG 0.598014 7_2:+21414361 Msa1052580:CDS
GAATCCAAAGCAGACAAAGA+CGG 0.598188 7_2:-21414638 None:intergenic
AAGAACACCATGTTCCCGAC+TGG 0.599065 7_2:-21415587 None:intergenic
GTCCGGTATGAGAGAGTGCA+AGG 0.602354 7_2:+21414767 Msa1052580:CDS
TTGAGTTGTGAATGAGCTAA+GGG 0.606199 7_2:-21413151 None:intergenic
AAAGGATCATACGGCGAGTG+AGG 0.606806 7_2:-21414587 None:intergenic
CAGTTTGTGAAGGCGGCGAG+AGG 0.607174 7_2:+21414455 Msa1052580:CDS
ACACCATGTTCCCGACTGGA+AGG 0.607395 7_2:-21415583 None:intergenic
TTACCATTACCTCTCCCACC+AGG 0.608019 7_2:-21413927 None:intergenic
TTCGAATCGATTTGGCATGG+TGG 0.609498 7_2:+21413569 Msa1052580:exon
ACTGTGGATATCTGTACAGT+TGG 0.612503 7_2:-21415404 None:intergenic
ATTGTGCGGCTATCATGGAA+AGG 0.612909 7_2:+21414717 Msa1052580:CDS
TGTGACCTTGGCGTCAAAGG+CGG 0.613053 7_2:-21413774 None:intergenic
AAAGATGAAGATACTGAGAC+GGG 0.615809 7_2:-21415328 None:intergenic
ACCACTGCCGGAATTCGGAT+CGG 0.616777 7_2:-21413718 None:intergenic
AACGAGAGAGGAAGAATCTG+GGG 0.619918 7_2:-21415299 None:intergenic
TCAAAGGGAGATTACGAGAG+TGG 0.621777 7_2:+21415835 Msa1052580:CDS
CTCCGGCGAGCAATCGAAAG+CGG 0.624516 7_2:-21413840 None:intergenic
TATCATGATTAAGGAAGGTG+AGG 0.626606 7_2:+21414796 Msa1052580:CDS
TTTGTGTTATCACTCATGAG+AGG 0.632566 7_2:-21415535 None:intergenic
TAGACAGCCTGATTTGATTG+GGG 0.632885 7_2:+21416065 Msa1052580:CDS
ATCCAAACATATAACGCCGA+AGG 0.633669 7_2:-21414686 None:intergenic
CCTGATAGTAGGAATAATGG+TGG 0.635478 7_2:+21414053 Msa1052580:CDS
AGCGAGTTCCGATGATATCG+GGG 0.636424 7_2:+21413881 Msa1052580:CDS
ACAATGAACTCAGCAGAGCA+AGG 0.638990 7_2:-21417015 None:intergenic
GTTCCGATGATATCGGGGAG+TGG 0.639001 7_2:+21413886 Msa1052580:CDS
TTCACCGGAAGGATTTGCGG+CGG 0.641408 7_2:-21413679 None:intergenic
CAACCACCTATTACTCCTGG+TGG 0.643523 7_2:+21413912 Msa1052580:CDS
CCTTGGTAATGATAACTTAG+GGG 0.645677 7_2:-21415107 None:intergenic
AACCACCTATTACTCCTGGT+GGG 0.645942 7_2:+21413913 Msa1052580:CDS
ATACTAGTAATATCCTCACT+AGG 0.646717 7_2:-21414284 None:intergenic
GTTACAAGATAGTCCTAGTG+AGG 0.647978 7_2:+21414271 Msa1052580:CDS
CCAGACATTGCTGATAGCGT+GGG 0.649233 7_2:+21415730 Msa1052580:CDS
ATGTTAGGGAAAAGAATGGG+AGG 0.650783 7_2:+21414336 Msa1052580:CDS
TGTTAGGGAAAAGAATGGGA+GGG 0.656791 7_2:+21414337 Msa1052580:CDS
GCACATATATAACATTGCAA+GGG 0.663741 7_2:-21418594 None:intergenic
CTCCCACCAGGAGTAATAGG+TGG 0.667076 7_2:-21413915 None:intergenic
GCAGATCGAGAACATAGATG+TGG 0.667316 7_2:-21415439 None:intergenic
ATATCTGTACAGTTGGACAC+TGG 0.675328 7_2:-21415397 None:intergenic
ATCATGGAAAGGGATGCTAG+AGG 0.675923 7_2:+21414728 Msa1052580:CDS
ACTTCCATTGCTGAACGCAG+AGG 0.680053 7_2:+21415487 Msa1052580:CDS
AGCAGAGCAAGGAACTCTTG+TGG 0.680964 7_2:-21417004 None:intergenic
CTGGGAAAAGAAATCCAGCA+AGG 0.682968 7_2:+21417149 Msa1052580:CDS
GAATCTGGAGAAACAAAAGG+AGG 0.683570 7_2:-21415229 None:intergenic
TTCTCCGATGATGCAAACGG+AGG 0.687515 7_2:-21414992 None:intergenic
AAAGCATCCCAAAACGAACG+TGG 0.693995 7_2:-21414821 None:intergenic
AGATGTATGAATGCACAACA+TGG 0.702134 7_2:-21415143 None:intergenic
TCGGCCACTCATCTAAACTC+CGG 0.702273 7_2:-21413857 None:intergenic
AGGCACAAAACCTCCCACGA+TGG 0.704213 7_2:-21414972 None:intergenic
GCCGCACAATACAGTCACCA+AGG 0.707837 7_2:+21416137 Msa1052580:CDS
TGAGTTGTGAATGAGCTAAG+GGG 0.708515 7_2:-21413150 None:intergenic
TTGGATTGGTAAGTATTGTG+CGG 0.708780 7_2:+21414703 Msa1052580:CDS
ACCTTGGTGACTGTATTGTG+CGG 0.749659 7_2:-21416138 None:intergenic
GTGGCGATAACTTGACACTG+TGG 0.783804 7_2:-21415420 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTTATATTATATATCAAA+AGG - chr7_2:21416241-21416260 None:intergenic 10.0%
!!! CTTTTGATATATAATATAAA+TGG + chr7_2:21416239-21416258 Msa1052580:intron 10.0%
!! AAAATAAAAAAAAATGAATG+TGG - chr7_2:21416685-21416704 None:intergenic 10.0%
!! AGTAAAATAAAAACATTAAA+TGG - chr7_2:21417894-21417913 None:intergenic 10.0%
!! AGTAATAGTAGTAATAATAA+TGG + chr7_2:21413984-21414003 Msa1052580:CDS 15.0%
!!! GATTGATAATTTAATATAAG+AGG + chr7_2:21416384-21416403 Msa1052580:intron 15.0%
!! AAAGAAAAAACTCAAAAAAA+AGG + chr7_2:21416707-21416726 Msa1052580:intron 15.0%
!! ATTATAACATAAATCAACAA+AGG - chr7_2:21416853-21416872 None:intergenic 15.0%
!!! TTTCATTTTTTCTATTTTCA+CGG + chr7_2:21416878-21416897 Msa1052580:intron 15.0%
!!! CATTAATTACTTTATTTACA+AGG - chr7_2:21417822-21417841 None:intergenic 15.0%
!!! AAATATTCTCATGTTATTTA+TGG + chr7_2:21418388-21418407 Msa1052580:three_prime_UTR 15.0%
!! TGAAAAAATGGATAGAAATT+GGG - chr7_2:21413337-21413356 None:intergenic 20.0%
!! ATTTGAAAGAGAAAGAAATT+GGG - chr7_2:21413370-21413389 None:intergenic 20.0%
!! TATTTGAAAGAGAAAGAAAT+TGG - chr7_2:21413371-21413390 None:intergenic 20.0%
!!! TTTTTGTAATAGAACCAAAA+CGG - chr7_2:21413448-21413467 None:intergenic 20.0%
!!! TGAAGTATTAATGCTAAATA+GGG - chr7_2:21416430-21416449 None:intergenic 20.0%
!!! ATGAAGTATTAATGCTAAAT+AGG - chr7_2:21416431-21416450 None:intergenic 20.0%
!! ATGTGTAAAAATGCTATTAA+CGG - chr7_2:21417286-21417305 None:intergenic 20.0%
!!! GTATCTAAAACAAAAAACAA+AGG - chr7_2:21417549-21417568 None:intergenic 20.0%
!!! TTTGTTTTAGATACTCAAAT+TGG + chr7_2:21417555-21417574 Msa1052580:intron 20.0%
!!! TCAAATTGGTTTTTAAGTTT+GGG + chr7_2:21417569-21417588 Msa1052580:intron 20.0%
!! ATCATATCTCATTTAATTCA+AGG + chr7_2:21418038-21418057 Msa1052580:intron 20.0%
!! TCATATCTCATTTAATTCAA+GGG + chr7_2:21418039-21418058 Msa1052580:intron 20.0%
!!! GGGATTTCTAAAATAATAAT+TGG - chr7_2:21418577-21418596 None:intergenic 20.0%
! AATTGGGAAAGAAAGAAAAA+GGG - chr7_2:21413180-21413199 None:intergenic 25.0%
!!! TTGATTTTGAAAGGTGAATT+GGG - chr7_2:21413210-21413229 None:intergenic 25.0%
!!! TTTGATTTTGAAAGGTGAAT+TGG - chr7_2:21413211-21413230 None:intergenic 25.0%
! GAACATGATGAATGAAATTT+GGG - chr7_2:21413255-21413274 None:intergenic 25.0%
! AGAACATGATGAATGAAATT+TGG - chr7_2:21413256-21413275 None:intergenic 25.0%
! AAATTGGGAAGAAAGAAAAA+TGG - chr7_2:21413322-21413341 None:intergenic 25.0%
! GTGAAAAAATGGATAGAAAT+TGG - chr7_2:21413338-21413357 None:intergenic 25.0%
! GGAATATTGAAGTGAAAAAA+TGG - chr7_2:21413349-21413368 None:intergenic 25.0%
! ATTACAAAAACCTAGTTTCT+AGG + chr7_2:21413458-21413477 Msa1052580:five_prime_UTR 25.0%
! TTACAAAAACCTAGTTTCTA+GGG + chr7_2:21413459-21413478 Msa1052580:five_prime_UTR 25.0%
! TTTGAAGAAAGATTCAAACT+TGG - chr7_2:21413529-21413548 None:intergenic 25.0%
! CGAAATCGAAACAATTTAAT+GGG - chr7_2:21413553-21413572 None:intergenic 25.0%
! TCGAAATCGAAACAATTTAA+TGG - chr7_2:21413554-21413573 None:intergenic 25.0%
! GTAGTAATAATAATGGTGAA+AGG + chr7_2:21413991-21414010 Msa1052580:CDS 25.0%
! AGAATAATAATCCTGATAGT+AGG + chr7_2:21414042-21414061 Msa1052580:CDS 25.0%
!!! AAATCACCTTTAAAATACTC+AGG - chr7_2:21414233-21414252 None:intergenic 25.0%
!! TTAAAGGTGATTTTGTGTAT+AGG + chr7_2:21414240-21414259 Msa1052580:CDS 25.0%
!! TTGTTATTGCTTATCTTATG+TGG + chr7_2:21414402-21414421 Msa1052580:CDS 25.0%
!! CAAGAAACGTTTTGTATATT+TGG + chr7_2:21415992-21416011 Msa1052580:CDS 25.0%
!! AACGTTTTGTATATTTGGAT+AGG + chr7_2:21415997-21416016 Msa1052580:CDS 25.0%
!! ACGTTTTGTATATTTGGATA+GGG + chr7_2:21415998-21416017 Msa1052580:CDS 25.0%
!! AGAAAATACTGCAATGTTTT+TGG - chr7_2:21416321-21416340 None:intergenic 25.0%
!! AAACATTGCAGTATTTTCTT+TGG + chr7_2:21416322-21416341 Msa1052580:intron 25.0%
!! AAAGAGATACTTCCTATTTT+GGG - chr7_2:21416350-21416369 None:intergenic 25.0%
! GCATTAATACTTCATATTGA+AGG + chr7_2:21416436-21416455 Msa1052580:intron 25.0%
! AACTAAACCTATTGTAAGTT+TGG + chr7_2:21416583-21416602 Msa1052580:intron 25.0%
! ACTAAACCTATTGTAAGTTT+GGG + chr7_2:21416584-21416603 Msa1052580:intron 25.0%
!!! CATTCACCTTTTAAGATTTT+TGG + chr7_2:21416626-21416645 Msa1052580:intron 25.0%
! GATAAATACATTCCAAAAGA+AGG - chr7_2:21416656-21416675 None:intergenic 25.0%
! AAAAAAATGAATGTGGTTTG+TGG - chr7_2:21416678-21416697 None:intergenic 25.0%
!! AAATTGATGATCAGCTTAAA+TGG + chr7_2:21416732-21416751 Msa1052580:intron 25.0%
!! TTCTCTTTAACAATCTGTTT+TGG - chr7_2:21416977-21416996 None:intergenic 25.0%
!! TCTATGTATGTCAATTTTGA+AGG + chr7_2:21417109-21417128 Msa1052580:CDS 25.0%
! TAAATAATAATGCAACTGCT+AGG - chr7_2:21417191-21417210 None:intergenic 25.0%
!!! CTCAAATTGGTTTTTAAGTT+TGG + chr7_2:21417568-21417587 Msa1052580:intron 25.0%
! GGATAATACATTAAATCTCA+TGG + chr7_2:21417590-21417609 Msa1052580:intron 25.0%
! TACATTAAATCTCATGGAAA+AGG + chr7_2:21417596-21417615 Msa1052580:intron 25.0%
! ATAATAAATGAAGACGTTGT+AGG - chr7_2:21417706-21417725 None:intergenic 25.0%
! GTGGAAAGAATAATTATAGT+TGG - chr7_2:21417741-21417760 None:intergenic 25.0%
! AGATTGTTGCCTATTAAAAA+AGG + chr7_2:21417939-21417958 Msa1052580:intron 25.0%
!!! TAGACAAAGCCTTTTTTAAT+AGG - chr7_2:21417951-21417970 None:intergenic 25.0%
! TCTAACATGTACAAGTAAAA+TGG + chr7_2:21417967-21417986 Msa1052580:intron 25.0%
!!! ACAAATGTCTTTTTCACTAT+TGG + chr7_2:21418003-21418022 Msa1052580:intron 25.0%
! AGAATTTATTGATCCAATTG+TGG + chr7_2:21418063-21418082 Msa1052580:intron 25.0%
!! CATTCATGAACATTTTCTAA+TGG - chr7_2:21418143-21418162 None:intergenic 25.0%
! AAATGTTCATGAATGATTGA+AGG + chr7_2:21418148-21418167 Msa1052580:intron 25.0%
! ACAAAATAGTAAGTCAAAAG+TGG - chr7_2:21418270-21418289 None:intergenic 25.0%
!! TATTCTCATGTTATTTATGG+AGG + chr7_2:21418391-21418410 Msa1052580:three_prime_UTR 25.0%
! ATAAGCGATACATTTAATGA+AGG - chr7_2:21418433-21418452 None:intergenic 25.0%
GAATTGGGAAAGAAAGAAAA+AGG - chr7_2:21413181-21413200 None:intergenic 30.0%
!!! TGAATTGGGATTTTGGAATT+GGG - chr7_2:21413196-21413215 None:intergenic 30.0%
!!! AGATGGGTTTTGATTTTGAA+AGG - chr7_2:21413219-21413238 None:intergenic 30.0%
ACTTCATTCATAAATCGCTT+CGG + chr7_2:21413390-21413409 Msa1052580:five_prime_UTR 30.0%
!! AATGGTAATGGTAATGGTAA+TGG + chr7_2:21413942-21413961 Msa1052580:CDS 30.0%
AATCCTGATAGTAGGAATAA+TGG + chr7_2:21414050-21414069 Msa1052580:CDS 30.0%
!! GAGATAGAGAGATTTTGAAA+AGG + chr7_2:21414165-21414184 Msa1052580:CDS 30.0%
!! AGAGAGATTTTGAAAAGGAA+TGG + chr7_2:21414170-21414189 Msa1052580:CDS 30.0%
!! GAGAGATTTTGAAAAGGAAT+GGG + chr7_2:21414171-21414190 Msa1052580:CDS 30.0%
!! ACTCATGTTTTGAATTGTGT+TGG + chr7_2:21414197-21414216 Msa1052580:CDS 30.0%
! ATTTTGTGTATAGGACTTTG+TGG + chr7_2:21414249-21414268 Msa1052580:CDS 30.0%
ATACTAGTAATATCCTCACT+AGG - chr7_2:21414287-21414306 None:intergenic 30.0%
TGATGTGTTTGATTACTTTG+AGG + chr7_2:21414313-21414332 Msa1052580:CDS 30.0%
! TTGATTACTTTGAGGATGTT+AGG + chr7_2:21414321-21414340 Msa1052580:CDS 30.0%
! TGATTACTTTGAGGATGTTA+GGG + chr7_2:21414322-21414341 Msa1052580:CDS 30.0%
TGTTTGTTCATTGTTGTCAA+GGG + chr7_2:21414360-21414379 Msa1052580:CDS 30.0%
TTATTGCTTATCTTATGTGG+AGG + chr7_2:21414405-21414424 Msa1052580:CDS 30.0%
TATTGCTTATCTTATGTGGA+GGG + chr7_2:21414406-21414425 Msa1052580:CDS 30.0%
AGGATCGATTATCATGATTA+AGG + chr7_2:21414787-21414806 Msa1052580:CDS 30.0%
TCGATTATCATGATTAAGGA+AGG + chr7_2:21414791-21414810 Msa1052580:CDS 30.0%
! TTCAAAGTTTTTGCCTTTGA+TGG + chr7_2:21414844-21414863 Msa1052580:CDS 30.0%
! TCAAGTGTTAGAATTTTTCC+TGG + chr7_2:21414899-21414918 Msa1052580:CDS 30.0%
!! AGAGTAGTTGGAGTATTTTA+AGG + chr7_2:21415044-21415063 Msa1052580:CDS 30.0%
ATTGCTAGAATCAGAAGAAA+TGG - chr7_2:21415254-21415273 None:intergenic 30.0%
ACTGGTTGAGAACTATAATT+TGG - chr7_2:21415382-21415401 None:intergenic 30.0%
!!! TGGTTTTTTCAATGGTAAAG+AGG - chr7_2:21415464-21415483 None:intergenic 30.0%
!!! GAAGTTGATGGTTTTTTCAA+TGG - chr7_2:21415472-21415491 None:intergenic 30.0%
TCCACTGCTAATGTAAAAAA+TGG + chr7_2:21415667-21415686 Msa1052580:CDS 30.0%
!!! TCCATTTTTTACATTAGCAG+TGG - chr7_2:21415671-21415690 None:intergenic 30.0%
ACTGCTAATGTAAAAAATGG+AGG + chr7_2:21415670-21415689 Msa1052580:CDS 30.0%
TACAAAGTTTAGTATATCGC+TGG + chr7_2:21415878-21415897 Msa1052580:CDS 30.0%
! TTAGAAAAGATTGAGGCATT+TGG + chr7_2:21415907-21415926 Msa1052580:CDS 30.0%
GATGCAAATTGATTATAGTG+TGG - chr7_2:21416206-21416225 None:intergenic 30.0%
TGTTGTATAAATGCACGAAA+TGG + chr7_2:21416272-21416291 Msa1052580:intron 30.0%
! GAAAGAGATACTTCCTATTT+TGG - chr7_2:21416351-21416370 None:intergenic 30.0%
! AAATAATGGAATACATGTGC+CGG - chr7_2:21416489-21416508 None:intergenic 30.0%
!!! CACCTTTTAAGATTTTTGGT+TGG + chr7_2:21416630-21416649 Msa1052580:intron 30.0%
! TTTTTACACATTTAACACCG+TGG + chr7_2:21417295-21417314 Msa1052580:intron 30.0%
ATTGTTCAACATATGAACCA+CGG - chr7_2:21417315-21417334 None:intergenic 30.0%
!! AGACTTTGTTATGGTTTTCA+TGG - chr7_2:21417433-21417452 None:intergenic 30.0%
GAAAACCATAACAAAGTCTT+AGG + chr7_2:21417434-21417453 Msa1052580:intron 30.0%
TAATGCAACTGTATTCAGAA+TGG - chr7_2:21417520-21417539 None:intergenic 30.0%
TACTAGAATTCCATGTTTCA+AGG + chr7_2:21417910-21417929 Msa1052580:intron 30.0%
! ATCTTTTGATCCTTGAAACA+TGG - chr7_2:21417923-21417942 None:intergenic 30.0%
! TGATTGAAGGTGAATTCTTT+TGG + chr7_2:21418161-21418180 Msa1052580:intron 30.0%
! TGAATTCTTTTGGATAGTGT+TGG + chr7_2:21418171-21418190 Msa1052580:intron 30.0%
! TACAATGGACTCTCATTAAA+TGG - chr7_2:21418315-21418334 None:intergenic 30.0%
GCACATATATAACATTGCAA+GGG - chr7_2:21418597-21418616 None:intergenic 30.0%
TGCACATATATAACATTGCA+AGG - chr7_2:21418598-21418617 None:intergenic 30.0%
! TTGAGTTGTGAATGAGCTAA+GGG - chr7_2:21413154-21413173 None:intergenic 35.0%
!! TTTGAGTTGTGAATGAGCTA+AGG - chr7_2:21413155-21413174 None:intergenic 35.0%
!!! GTGAATTGGGATTTTGGAAT+TGG - chr7_2:21413197-21413216 None:intergenic 35.0%
! TGAAAGGTGAATTGGGATTT+TGG - chr7_2:21413203-21413222 None:intergenic 35.0%
!! GGGATTTGATTTTGAGAGAT+GGG - chr7_2:21413235-21413254 None:intergenic 35.0%
!! TGGGATTTGATTTTGAGAGA+TGG - chr7_2:21413236-21413255 None:intergenic 35.0%
! TCAAACTTGGTGGAAGAAAT+TGG - chr7_2:21413516-21413535 None:intergenic 35.0%
GAAGAAAGATTCAAACTTGG+TGG - chr7_2:21413526-21413545 None:intergenic 35.0%
GTTTCGATTTCGAATCGATT+TGG + chr7_2:21413561-21413580 Msa1052580:five_prime_UTR 35.0%
! ACATTTTCCGGGAATTTGAA+AGG - chr7_2:21413623-21413642 None:intergenic 35.0%
! CAAATTCCCGGAAAATGTTT+TGG + chr7_2:21413625-21413644 Msa1052580:CDS 35.0%
!! AGAGGTAATGGTAATGGTAA+TGG + chr7_2:21413936-21413955 Msa1052580:CDS 35.0%
GTTGCTGAACATGTTTATCT+TGG + chr7_2:21414125-21414144 Msa1052580:CDS 35.0%
!! GTGTGTCCTGAGTATTTTAA+AGG + chr7_2:21414224-21414243 Msa1052580:CDS 35.0%
AGGATGTTAGGGAAAAGAAT+GGG + chr7_2:21414333-21414352 Msa1052580:CDS 35.0%
GTGTTTGTTCATTGTTGTCA+AGG + chr7_2:21414359-21414378 Msa1052580:CDS 35.0%
GTTTGTTCATTGTTGTCAAG+GGG + chr7_2:21414361-21414380 Msa1052580:CDS 35.0%
! TGATGCTTTTCAGTTTGTGA+AGG + chr7_2:21414445-21414464 Msa1052580:CDS 35.0%
TACATTCTCAACAAAGAGCT+TGG - chr7_2:21414557-21414576 None:intergenic 35.0%
GCTCTTTGTTGAGAATGTAT+AGG + chr7_2:21414558-21414577 Msa1052580:CDS 35.0%
ACAAGATGCAAAGGATCATA+CGG - chr7_2:21414599-21414618 None:intergenic 35.0%
! TTTGTCTGCTTTGGATTCTA+GGG + chr7_2:21414643-21414662 Msa1052580:CDS 35.0%
GTTTATTGTGCACATTCCTT+CGG + chr7_2:21414670-21414689 Msa1052580:CDS 35.0%
!! TTGGATTGGTAAGTATTGTG+CGG + chr7_2:21414703-21414722 Msa1052580:CDS 35.0%
TATCATGATTAAGGAAGGTG+AGG + chr7_2:21414796-21414815 Msa1052580:CDS 35.0%
! TTAGAATTTTTCCTGGTGAG+AGG + chr7_2:21414906-21414925 Msa1052580:CDS 35.0%
!! GTAGTTGGAGTATTTTAAGG+CGG + chr7_2:21415047-21415066 Msa1052580:CDS 35.0%
!! CCTTGGTAATGATAACTTAG+GGG - chr7_2:21415110-21415129 None:intergenic 35.0%
!! CCCTTGGTAATGATAACTTA+GGG - chr7_2:21415111-21415130 None:intergenic 35.0%
CCCTAAGTTATCATTACCAA+GGG + chr7_2:21415108-21415127 Msa1052580:CDS 35.0%
!! ACCCTTGGTAATGATAACTT+AGG - chr7_2:21415112-21415131 None:intergenic 35.0%
ATGGAATCTGAATAAACCCT+TGG - chr7_2:21415127-21415146 None:intergenic 35.0%
AGATGTATGAATGCACAACA+TGG - chr7_2:21415146-21415165 None:intergenic 35.0%
ATGGAATCTGGAGAAACAAA+AGG - chr7_2:21415235-21415254 None:intergenic 35.0%
GAATCAGAAGAAATGGAATC+TGG - chr7_2:21415247-21415266 None:intergenic 35.0%
AAAGATGAAGATACTGAGAC+GGG - chr7_2:21415331-21415350 None:intergenic 35.0%
CAAAGATGAAGATACTGAGA+CGG - chr7_2:21415332-21415351 None:intergenic 35.0%
TCAGTATCTTCATCTTTGTC+TGG + chr7_2:21415334-21415353 Msa1052580:CDS 35.0%
TTTGTGTTATCACTCATGAG+AGG - chr7_2:21415538-21415557 None:intergenic 35.0%
CCAGATAAACTATCTACTGA+AGG - chr7_2:21415793-21415812 None:intergenic 35.0%
CCTTCAGTAGATAGTTTATC+TGG + chr7_2:21415790-21415809 Msa1052580:CDS 35.0%
! TTTGAAGTCTGCATCATCAA+AGG + chr7_2:21415819-21415838 Msa1052580:CDS 35.0%
TTGAAGTCTGCATCATCAAA+GGG + chr7_2:21415820-21415839 Msa1052580:CDS 35.0%
GCCAAGTTTAGAAAAGATTG+AGG + chr7_2:21415900-21415919 Msa1052580:CDS 35.0%
! GCCTCAATCTTTTCTAAACT+TGG - chr7_2:21415904-21415923 None:intergenic 35.0%
!! GCATTTGGTGCAAATCATTT+GGG + chr7_2:21415922-21415941 Msa1052580:CDS 35.0%
! ATAGACAGCCTGATTTGATT+GGG + chr7_2:21416064-21416083 Msa1052580:CDS 35.0%
AGAGATAAGATCACATACCT+TGG - chr7_2:21416157-21416176 None:intergenic 35.0%
!! TTTTCTTTGGCTCCCAAAAT+AGG + chr7_2:21416335-21416354 Msa1052580:intron 35.0%
TATCTCTTTCCATTTCAGAG+TGG + chr7_2:21416361-21416380 Msa1052580:intron 35.0%
ATCTCTTTCCATTTCAGAGT+GGG + chr7_2:21416362-21416381 Msa1052580:intron 35.0%
! TTATCAATCCCACTCTGAAA+TGG - chr7_2:21416373-21416392 None:intergenic 35.0%
! ACTTCATATTGAAGGTGTGT+CGG + chr7_2:21416444-21416463 Msa1052580:intron 35.0%
GGCCAACCAAAAATCTTAAA+AGG - chr7_2:21416635-21416654 None:intergenic 35.0%
!!! ATTTTTGGTTGGCCTTCTTT+TGG + chr7_2:21416641-21416660 Msa1052580:intron 35.0%
ACAAAGGCTAACACAAGAAA+AGG - chr7_2:21416837-21416856 None:intergenic 35.0%
ATTGTAGCACAAGAGTTACT+TGG + chr7_2:21417033-21417052 Msa1052580:intron 35.0%
ACGGAAATTTACTTGAACTC+AGG - chr7_2:21417064-21417083 None:intergenic 35.0%
ATAATAATGCAACTGCTAGG+AGG - chr7_2:21417188-21417207 None:intergenic 35.0%
!! TAACGGTTGATAGAAACTGT+AGG - chr7_2:21417269-21417288 None:intergenic 35.0%
TTGCTCCTAAGACTTTGTTA+TGG - chr7_2:21417442-21417461 None:intergenic 35.0%
TAAGAGTTACTCTTACTGGT+AGG - chr7_2:21417763-21417782 None:intergenic 35.0%
TGAACCAAGTGTCTTTATTG+CGG - chr7_2:21417786-21417805 None:intergenic 35.0%
GTGAAAAAGACATTTGTGCA+TGG - chr7_2:21418000-21418019 None:intergenic 35.0%
! TTTGGATAGTGTTGGAAACT+AGG + chr7_2:21418179-21418198 Msa1052580:intron 35.0%
!! ATTTTGTATATGCTGCTTGC+AGG + chr7_2:21418283-21418302 Msa1052580:intron 35.0%
AATCATAAGCCAAGCTACAA+TGG - chr7_2:21418330-21418349 None:intergenic 35.0%
TATGGAGGAAGAAAAATCTC+AGG + chr7_2:21418406-21418425 Msa1052580:three_prime_UTR 35.0%
TGAGTTGTGAATGAGCTAAG+GGG - chr7_2:21413153-21413172 None:intergenic 40.0%
TTCGAACCCTAATTCTTGCT+CGG - chr7_2:21413487-21413506 None:intergenic 40.0%
!! GATTTCGAATCGATTTGGCA+TGG + chr7_2:21413566-21413585 Msa1052580:exon 40.0%
! TTTTCCGGGAATTTGAAAGG+TGG - chr7_2:21413620-21413639 None:intergenic 40.0%
! TGAACGCCAAAACATTTTCC+GGG - chr7_2:21413634-21413653 None:intergenic 40.0%
! CTGAACGCCAAAACATTTTC+CGG - chr7_2:21413635-21413654 None:intergenic 40.0%
AATTTCACCGATCCGAATTC+CGG + chr7_2:21413711-21413730 Msa1052580:CDS 40.0%
! GTGGTGGAGATAATACTAAC+CGG + chr7_2:21413739-21413758 Msa1052580:CDS 40.0%
TTACAATTCTGCTGTGACCT+TGG - chr7_2:21413789-21413808 None:intergenic 40.0%
AAGGTCACAGCAGAATTGTA+AGG + chr7_2:21413788-21413807 Msa1052580:CDS 40.0%
ATATCATCGGAACTCGCTTT+CGG - chr7_2:21413879-21413898 None:intergenic 40.0%
AAAGCGAGTTCCGATGATAT+CGG + chr7_2:21413879-21413898 Msa1052580:CDS 40.0%
CCACCATTATTCCTACTATC+AGG - chr7_2:21414056-21414075 None:intergenic 40.0%
CCTGATAGTAGGAATAATGG+TGG + chr7_2:21414053-21414072 Msa1052580:CDS 40.0%
GCTGAACATGTTTATCTTGG+TGG + chr7_2:21414128-21414147 Msa1052580:CDS 40.0%
GTTACAAGATAGTCCTAGTG+AGG + chr7_2:21414271-21414290 Msa1052580:CDS 40.0%
GAGGATGTTAGGGAAAAGAA+TGG + chr7_2:21414332-21414351 Msa1052580:CDS 40.0%
ATGTTAGGGAAAAGAATGGG+AGG + chr7_2:21414336-21414355 Msa1052580:CDS 40.0%
TGTTAGGGAAAAGAATGGGA+GGG + chr7_2:21414337-21414356 Msa1052580:CDS 40.0%
CTTATCTTATGTGGAGGGAA+GGG + chr7_2:21414411-21414430 Msa1052580:CDS 40.0%
! TGCTTTTCAGTTTGTGAAGG+CGG + chr7_2:21414448-21414467 Msa1052580:CDS 40.0%
! AGGTATTGCTGATCCGAATA+TGG + chr7_2:21414475-21414494 Msa1052580:CDS 40.0%
GGTATTGCTGATCCGAATAT+GGG + chr7_2:21414476-21414495 Msa1052580:CDS 40.0%
TGACAAGCGAAACCCATATT+CGG - chr7_2:21414491-21414510 None:intergenic 40.0%
AGTTGTTGCAGTGTCAGAAA+AGG + chr7_2:21414510-21414529 Msa1052580:CDS 40.0%
GTTGTTGCAGTGTCAGAAAA+GGG + chr7_2:21414511-21414530 Msa1052580:CDS 40.0%
AACAAAGAGCTTGGACTAAG+TGG - chr7_2:21414548-21414567 None:intergenic 40.0%
ATCTTCGGAACAAGATGCAA+AGG - chr7_2:21414608-21414627 None:intergenic 40.0%
TCTTGTTCCGAAGATGTTGA+CGG + chr7_2:21414613-21414632 Msa1052580:CDS 40.0%
GAATCCAAAGCAGACAAAGA+CGG - chr7_2:21414641-21414660 None:intergenic 40.0%
! CTTTGTCTGCTTTGGATTCT+AGG + chr7_2:21414642-21414661 Msa1052580:CDS 40.0%
! TTGTCTGCTTTGGATTCTAG+GGG + chr7_2:21414644-21414663 Msa1052580:CDS 40.0%
TTCCTTCGGCGTTATATGTT+TGG + chr7_2:21414684-21414703 Msa1052580:CDS 40.0%
ATCCAAACATATAACGCCGA+AGG - chr7_2:21414689-21414708 None:intergenic 40.0%
TCGGCGTTATATGTTTGGAT+TGG + chr7_2:21414689-21414708 Msa1052580:CDS 40.0%
! TAAGTATTGTGCGGCTATCA+TGG + chr7_2:21414712-21414731 Msa1052580:CDS 40.0%
! AGTTTTCAGAAAAGCCATCG+TGG + chr7_2:21414958-21414977 Msa1052580:CDS 40.0%
! GTTTTCAGAAAAGCCATCGT+GGG + chr7_2:21414959-21414978 Msa1052580:CDS 40.0%
TCATTCTCCGATGATGCAAA+CGG - chr7_2:21414998-21415017 None:intergenic 40.0%
AAATTCCTGTCCTGATGTGA+AGG + chr7_2:21415072-21415091 Msa1052580:CDS 40.0%
CCCCTAAGTTATCATTACCA+AGG + chr7_2:21415107-21415126 Msa1052580:CDS 40.0%
GAGTCAGTTGACAACATTGA+CGG - chr7_2:21415187-21415206 None:intergenic 40.0%
AGAAACAAAAGGAGGTGAAG+AGG - chr7_2:21415224-21415243 None:intergenic 40.0%
GAATCTGGAGAAACAAAAGG+AGG - chr7_2:21415232-21415251 None:intergenic 40.0%
AAACGAGAGAGGAAGAATCT+GGG - chr7_2:21415303-21415322 None:intergenic 40.0%
AAAACGAGAGAGGAAGAATC+TGG - chr7_2:21415304-21415323 None:intergenic 40.0%
ATATCTGTACAGTTGGACAC+TGG - chr7_2:21415400-21415419 None:intergenic 40.0%
ACTGTGGATATCTGTACAGT+TGG - chr7_2:21415407-21415426 None:intergenic 40.0%
CATCAACTATTCCTTCCAGT+CGG + chr7_2:21415572-21415591 Msa1052580:CDS 40.0%
ATCAACTATTCCTTCCAGTC+GGG + chr7_2:21415573-21415592 Msa1052580:CDS 40.0%
!! GGCATTTGGTGCAAATCATT+TGG + chr7_2:21415921-21415940 Msa1052580:CDS 40.0%
! TGCAAATCATTTGGGTTCAG+AGG + chr7_2:21415930-21415949 Msa1052580:CDS 40.0%
CTTGCATGCATATGTATGCT+TGG - chr7_2:21415976-21415995 None:intergenic 40.0%
GATAGGGAGTTCTTTCAAAC+TGG + chr7_2:21416014-21416033 Msa1052580:CDS 40.0%
AACTGGATGCTTCACATGTT+CGG + chr7_2:21416031-21416050 Msa1052580:CDS 40.0%
! GATAGACAGCCTGATTTGAT+TGG + chr7_2:21416063-21416082 Msa1052580:CDS 40.0%
! TAGACAGCCTGATTTGATTG+GGG + chr7_2:21416065-21416084 Msa1052580:CDS 40.0%
GCAGTTGACTGGAACAAAAT+TGG + chr7_2:21416087-21416106 Msa1052580:CDS 40.0%
GTGTGGAGTTATAAAGTGTG+AGG - chr7_2:21416189-21416208 None:intergenic 40.0%
CCTCAACCCAAACTTACAAT+AGG - chr7_2:21416593-21416612 None:intergenic 40.0%
!! CCTATTGTAAGTTTGGGTTG+AGG + chr7_2:21416590-21416609 Msa1052580:intron 40.0%
CACAAGAAAAGGTTGCTGAA+GGG - chr7_2:21416826-21416845 None:intergenic 40.0%
ACACAAGAAAAGGTTGCTGA+AGG - chr7_2:21416827-21416846 None:intergenic 40.0%
GAATTAAGCTTCATGCACTG+TGG + chr7_2:21416907-21416926 Msa1052580:intron 40.0%
TGCAGATGAAGGAAAGGTTA+CGG - chr7_2:21417083-21417102 None:intergenic 40.0%
ATAGAAACAGCTGCAGATGA+AGG - chr7_2:21417094-21417113 None:intergenic 40.0%
! GCTCTAATTTGATTTCCCCT+GGG + chr7_2:21417131-21417150 Msa1052580:CDS 40.0%
! TTGCTGGATTTCTTTTCCCA+GGG - chr7_2:21417150-21417169 None:intergenic 40.0%
GATTCGATTCATTACCTTGC+TGG - chr7_2:21417166-21417185 None:intergenic 40.0%
TGCAACACTCACTAAAGCAA+AGG - chr7_2:21417378-21417397 None:intergenic 40.0%
CTTACCGCAATAAAGACACT+TGG + chr7_2:21417779-21417798 Msa1052580:intron 40.0%
! CACAAGTTAGCTTCCACAAT+TGG - chr7_2:21418079-21418098 None:intergenic 40.0%
AGATGAGGTGATGAAGTGAA+GGG - chr7_2:21418219-21418238 None:intergenic 40.0%
GCATACACACAAAACAGATG+AGG - chr7_2:21418234-21418253 None:intergenic 40.0%
AATGAGAGTCCATTGTAGCT+TGG + chr7_2:21418318-21418337 Msa1052580:exon 40.0%
TGAATGAGCTAAGGGGAAGT+GGG - chr7_2:21413146-21413165 None:intergenic 45.0%
! TCATCAATGCGACACCGTTT+TGG + chr7_2:21413431-21413450 Msa1052580:five_prime_UTR 45.0%
TAGGGTTCCGAGCAAGAATT+AGG + chr7_2:21413477-21413496 Msa1052580:five_prime_UTR 45.0%
AGGGTTCCGAGCAAGAATTA+GGG + chr7_2:21413478-21413497 Msa1052580:five_prime_UTR 45.0%
!! TTCGAATCGATTTGGCATGG+TGG + chr7_2:21413569-21413588 Msa1052580:exon 45.0%
!! TCGAATCGATTTGGCATGGT+GGG + chr7_2:21413570-21413589 Msa1052580:exon 45.0%
CATGCCACCTTTCAAATTCC+CGG + chr7_2:21413613-21413632 Msa1052580:CDS 45.0%
!!! TGTTTTGGCGTTCAGCTTCA+TGG + chr7_2:21413640-21413659 Msa1052580:CDS 45.0%
GAAATTCGATTCCGGTTCAC+CGG - chr7_2:21413697-21413716 None:intergenic 45.0%
GGATCGGTGAAATTCGATTC+CGG - chr7_2:21413705-21413724 None:intergenic 45.0%
AAGCGAGTTCCGATGATATC+GGG + chr7_2:21413880-21413899 Msa1052580:CDS 45.0%
AACCACCTATTACTCCTGGT+GGG + chr7_2:21413913-21413932 Msa1052580:CDS 45.0%
GCTTATCTTATGTGGAGGGA+AGG + chr7_2:21414410-21414429 Msa1052580:CDS 45.0%
ATTGTGCGGCTATCATGGAA+AGG + chr7_2:21414717-21414736 Msa1052580:CDS 45.0%
TTGTGCGGCTATCATGGAAA+GGG + chr7_2:21414718-21414737 Msa1052580:CDS 45.0%
ATCATGGAAAGGGATGCTAG+AGG + chr7_2:21414728-21414747 Msa1052580:CDS 45.0%
TCATGGAAAGGGATGCTAGA+GGG + chr7_2:21414729-21414748 Msa1052580:CDS 45.0%
ATCCTTGCACTCTCTCATAC+CGG - chr7_2:21414772-21414791 None:intergenic 45.0%
! TGAGGAACCACGTTCGTTTT+GGG + chr7_2:21414814-21414833 Msa1052580:CDS 45.0%
! AAAGCATCCCAAAACGAACG+TGG - chr7_2:21414824-21414843 None:intergenic 45.0%
! TTGCCTTTGATGGACATGTC+TGG + chr7_2:21414854-21414873 Msa1052580:CDS 45.0%
! TGCCTTTGATGGACATGTCT+GGG + chr7_2:21414855-21414874 Msa1052580:CDS 45.0%
! TTTTCCTGGTGAGAGGAAAG+TGG + chr7_2:21414913-21414932 Msa1052580:CDS 45.0%
ACTCTCTCTTGCAGGAAGAT+GGG - chr7_2:21415029-21415048 None:intergenic 45.0%
TACTCTCTCTTGCAGGAAGA+TGG - chr7_2:21415030-21415049 None:intergenic 45.0%
TTCCTGCAAGAGAGAGTAGT+TGG + chr7_2:21415032-21415051 Msa1052580:CDS 45.0%
AAACTCCTTCACATCAGGAC+AGG - chr7_2:21415080-21415099 None:intergenic 45.0%
GAGAGAAACTCCTTCACATC+AGG - chr7_2:21415085-21415104 None:intergenic 45.0%
GTTGACAACATTGACGGTGA+TGG - chr7_2:21415181-21415200 None:intergenic 45.0%
AACGAGAGAGGAAGAATCTG+GGG - chr7_2:21415302-21415321 None:intergenic 45.0%
GCAGATCGAGAACATAGATG+TGG - chr7_2:21415442-21415461 None:intergenic 45.0%
CGTTCAGCAATGGAAGTTGA+TGG - chr7_2:21415484-21415503 None:intergenic 45.0%
CGACTGGAAGGAATAGTTGA+TGG - chr7_2:21415574-21415593 None:intergenic 45.0%
GCAATGAACCATCAGTTCTC+AGG + chr7_2:21415755-21415774 Msa1052580:CDS 45.0%
ACACAGTTCCTGAGAACTGA+TGG - chr7_2:21415766-21415785 None:intergenic 45.0%
TCAAAGGGAGATTACGAGAG+TGG + chr7_2:21415835-21415854 Msa1052580:CDS 45.0%
TCAACTGCCCCAATCAAATC+AGG - chr7_2:21416075-21416094 None:intergenic 45.0%
ATTTGATTGGGGCAGTTGAC+TGG + chr7_2:21416076-21416095 Msa1052580:CDS 45.0%
! ACCTTGGTGACTGTATTGTG+CGG - chr7_2:21416141-21416160 None:intergenic 45.0%
! GTGTTTGTCAGTGTCGAGAA+TGG + chr7_2:21416533-21416552 Msa1052580:intron 45.0%
TCGAGAATGGTGTTTGTGTC+TGG + chr7_2:21416546-21416565 Msa1052580:intron 45.0%
CGAGAATGGTGTTTGTGTCT+GGG + chr7_2:21416547-21416566 Msa1052580:intron 45.0%
ACAATGAACTCAGCAGAGCA+AGG - chr7_2:21417018-21417037 None:intergenic 45.0%
AACAGCTGCAGATGAAGGAA+AGG - chr7_2:21417089-21417108 None:intergenic 45.0%
! GGCTCTAATTTGATTTCCCC+TGG + chr7_2:21417130-21417149 Msa1052580:CDS 45.0%
! TGCTGGATTTCTTTTCCCAG+GGG - chr7_2:21417149-21417168 None:intergenic 45.0%
! CTTGCTGGATTTCTTTTCCC+AGG - chr7_2:21417151-21417170 None:intergenic 45.0%
CTGGGAAAAGAAATCCAGCA+AGG + chr7_2:21417149-21417168 Msa1052580:CDS 45.0%
GAGTTACTCTTACTGGTAGG+TGG - chr7_2:21417760-21417779 None:intergenic 45.0%
GCGGTAAGAGTTACTCTTAC+TGG - chr7_2:21417767-21417786 None:intergenic 45.0%
TGGTCAATTCTACTGTGCAC+AGG - chr7_2:21418123-21418142 None:intergenic 45.0%
CAGATGAGGTGATGAAGTGA+AGG - chr7_2:21418220-21418239 None:intergenic 45.0%
! TTGTATATGCTGCTTGCAGG+AGG + chr7_2:21418286-21418305 Msa1052580:intron 45.0%
!! AGAAATAAAATATAAAATAA+TGG - chr7_2:21416503-21416522 None:intergenic 5.0%
GTGAATGAGCTAAGGGGAAG+TGG - chr7_2:21413147-21413166 None:intergenic 50.0%
TGCTCGGAACCCTAGAAACT+AGG - chr7_2:21413471-21413490 None:intergenic 50.0%
CGGGAATTTGAAAGGTGGCA+TGG - chr7_2:21413615-21413634 None:intergenic 50.0%
ATTATCTCCACCACCACTGC+CGG - chr7_2:21413733-21413752 None:intergenic 50.0%
AGCAATCGAAAGCGGCTGAA+GGG - chr7_2:21413835-21413854 None:intergenic 50.0%
TCGGCCACTCATCTAAACTC+CGG - chr7_2:21413860-21413879 None:intergenic 50.0%
AGCGAGTTCCGATGATATCG+GGG + chr7_2:21413881-21413900 Msa1052580:CDS 50.0%
CCAGGAGTAATAGGTGGTTG+TGG - chr7_2:21413912-21413931 None:intergenic 50.0%
CCACAACCACCTATTACTCC+TGG + chr7_2:21413909-21413928 Msa1052580:CDS 50.0%
CAACCACCTATTACTCCTGG+TGG + chr7_2:21413912-21413931 Msa1052580:CDS 50.0%
TTACCATTACCTCTCCCACC+AGG - chr7_2:21413930-21413949 None:intergenic 50.0%
! GGTGGGAGAGGTAATGGTAA+TGG + chr7_2:21413930-21413949 Msa1052580:CDS 50.0%
!! ATTGTTGTCAAGGGGTGTCG+AGG + chr7_2:21414369-21414388 Msa1052580:CDS 50.0%
AAAGGATCATACGGCGAGTG+AGG - chr7_2:21414590-21414609 None:intergenic 50.0%
GACGGATCCGTCAACATCTT+CGG - chr7_2:21414623-21414642 None:intergenic 50.0%
GGATCCGTCTTTGTCTGCTT+TGG + chr7_2:21414634-21414653 Msa1052580:CDS 50.0%
CATGGAAAGGGATGCTAGAG+GGG + chr7_2:21414730-21414749 Msa1052580:CDS 50.0%
! GTGAGGAACCACGTTCGTTT+TGG + chr7_2:21414813-21414832 Msa1052580:CDS 50.0%
CTCCCAGACATGTCCATCAA+AGG - chr7_2:21414860-21414879 None:intergenic 50.0%
TTCAGAAAAGCCATCGTGGG+AGG + chr7_2:21414962-21414981 Msa1052580:CDS 50.0%
TGTGCCTCCGTTTGCATCAT+CGG + chr7_2:21414988-21415007 Msa1052580:CDS 50.0%
TTCTCCGATGATGCAAACGG+AGG - chr7_2:21414995-21415014 None:intergenic 50.0%
CTCCAACTACTCTCTCTTGC+AGG - chr7_2:21415037-21415056 None:intergenic 50.0%
GACGGGAGTAAAAACGAGAG+AGG - chr7_2:21415314-21415333 None:intergenic 50.0%
GTGGCGATAACTTGACACTG+TGG - chr7_2:21415423-21415442 None:intergenic 50.0%
ACTTCCATTGCTGAACGCAG+AGG + chr7_2:21415487-21415506 Msa1052580:CDS 50.0%
ACTACCTCTGCGTTCAGCAA+TGG - chr7_2:21415494-21415513 None:intergenic 50.0%
ATTCCTTCCAGTCGGGAACA+TGG + chr7_2:21415580-21415599 Msa1052580:CDS 50.0%
AAGAACACCATGTTCCCGAC+TGG - chr7_2:21415590-21415609 None:intergenic 50.0%
GCAATGTCTGGACATGAAGC+TGG - chr7_2:21415721-21415740 None:intergenic 50.0%
! TCCAGACATTGCTGATAGCG+TGG + chr7_2:21415729-21415748 Msa1052580:CDS 50.0%
! CCAGACATTGCTGATAGCGT+GGG + chr7_2:21415730-21415749 Msa1052580:CDS 50.0%
TGTCAGACATGTGTCGTCAC+CGG + chr7_2:21416467-21416486 Msa1052580:intron 50.0%
AGCAGAGCAAGGAACTCTTG+TGG - chr7_2:21417007-21417026 None:intergenic 50.0%
TTCACCGGAAGGATTTGCGG+CGG - chr7_2:21413682-21413701 None:intergenic 55.0%
CGGTTCACCGGAAGGATTTG+CGG - chr7_2:21413685-21413704 None:intergenic 55.0%
CGCAAATCCTTCCGGTGAAC+CGG + chr7_2:21413683-21413702 Msa1052580:CDS 55.0%
TTCGATTCCGGTTCACCGGA+AGG - chr7_2:21413693-21413712 None:intergenic 55.0%
ACCACTGCCGGAATTCGGAT+CGG - chr7_2:21413721-21413740 None:intergenic 55.0%
AAGGCGGTGGAGGAAATCTC+CGG - chr7_2:21413761-21413780 None:intergenic 55.0%
TGTGACCTTGGCGTCAAAGG+CGG - chr7_2:21413777-21413796 None:intergenic 55.0%
TGCTGTGACCTTGGCGTCAA+AGG - chr7_2:21413780-21413799 None:intergenic 55.0%
GCAATCGAAAGCGGCTGAAG+GGG - chr7_2:21413834-21413853 None:intergenic 55.0%
GAGCAATCGAAAGCGGCTGA+AGG - chr7_2:21413836-21413855 None:intergenic 55.0%
CTCGCCGGAGTTTAGATGAG+TGG + chr7_2:21413853-21413872 Msa1052580:CDS 55.0%
GTTCCGATGATATCGGGGAG+TGG + chr7_2:21413886-21413905 Msa1052580:CDS 55.0%
TGGCCACTCCCCGATATCAT+CGG - chr7_2:21413892-21413911 None:intergenic 55.0%
CTCCCACCAGGAGTAATAGG+TGG - chr7_2:21413918-21413937 None:intergenic 55.0%
CCTCTCCCACCAGGAGTAAT+AGG - chr7_2:21413921-21413940 None:intergenic 55.0%
CCTATTACTCCTGGTGGGAG+AGG + chr7_2:21413918-21413937 Msa1052580:CDS 55.0%
ACTCCTGGTGGGAGAGGTAA+TGG + chr7_2:21413924-21413943 Msa1052580:CDS 55.0%
! GTCCGGTATGAGAGAGTGCA+AGG + chr7_2:21414767-21414786 Msa1052580:CDS 55.0%
GCATCCACTTTCCTCTCACC+AGG - chr7_2:21414920-21414939 None:intergenic 55.0%
AGGCACAAAACCTCCCACGA+TGG - chr7_2:21414975-21414994 None:intergenic 55.0%
ACACCATGTTCCCGACTGGA+AGG - chr7_2:21415586-21415605 None:intergenic 55.0%
CCCACGCTATCAGCAATGTC+TGG - chr7_2:21415733-21415752 None:intergenic 55.0%
GCCGCACAATACAGTCACCA+AGG + chr7_2:21416137-21416156 Msa1052580:CDS 55.0%
AAGGATTTGCGGCGGCGGAA+CGG - chr7_2:21413674-21413693 None:intergenic 60.0%
ACCGATCCGAATTCCGGCAG+TGG + chr7_2:21413717-21413736 Msa1052580:CDS 60.0%
GATCCGAATTCCGGCAGTGG+TGG + chr7_2:21413720-21413739 Msa1052580:CDS 60.0%
CCACCACCACTGCCGGAATT+CGG - chr7_2:21413726-21413745 None:intergenic 60.0%
ATCGAAAGCGGCTGAAGGGG+CGG - chr7_2:21413831-21413850 None:intergenic 60.0%
! AGCCGCTTTCGATTGCTCGC+CGG + chr7_2:21413838-21413857 Msa1052580:CDS 60.0%
CTCCGGCGAGCAATCGAAAG+CGG - chr7_2:21413843-21413862 None:intergenic 60.0%
CAGTTTGTGAAGGCGGCGAG+AGG + chr7_2:21414455-21414474 Msa1052580:CDS 60.0%
AAGGGATGCTAGAGGGGCTG+CGG + chr7_2:21414736-21414755 Msa1052580:CDS 60.0%
GGGCTGCGGATCAGATTGTC+CGG + chr7_2:21414750-21414769 Msa1052580:CDS 60.0%
AGGATTTGCGGCGGCGGAAC+GGG - chr7_2:21413673-21413692 None:intergenic 65.0%
TCCGCCGCCGCAAATCCTTC+CGG + chr7_2:21413675-21413694 Msa1052580:CDS 65.0%
ACCGGAAGGATTTGCGGCGG+CGG - chr7_2:21413679-21413698 None:intergenic 65.0%
CCGAATTCCGGCAGTGGTGG+TGG + chr7_2:21413723-21413742 Msa1052580:CDS 65.0%
CTTGGCGTCAAAGGCGGTGG+AGG - chr7_2:21413771-21413790 None:intergenic 65.0%
CTCCACCGCCTTTGACGCCA+AGG + chr7_2:21413769-21413788 Msa1052580:CDS 65.0%
GACCTTGGCGTCAAAGGCGG+TGG - chr7_2:21413774-21413793 None:intergenic 65.0%
ATTTGCGGCGGCGGAACGGG+CGG - chr7_2:21413670-21413689 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 21413143 21418618 21413143 ID=Msa1052580;Name=Msa1052580
chr7_2 mRNA 21413143 21418618 21413143 ID=Msa1052580-mRNA-1;Parent=Msa1052580;Name=Msa1052580-mRNA-1;_AED=0.01;_eAED=0.01;_QI=442|0.66|0.5|1|1|1|4|283|905
chr7_2 exon 21413143 21416158 21413143 ID=Msa1052580-mRNA-1:exon:4767;Parent=Msa1052580-mRNA-1
chr7_2 exon 21416983 21417028 21416983 ID=Msa1052580-mRNA-1:exon:4768;Parent=Msa1052580-mRNA-1
chr7_2 exon 21417104 21417170 21417104 ID=Msa1052580-mRNA-1:exon:4769;Parent=Msa1052580-mRNA-1
chr7_2 exon 21418305 21418618 21418305 ID=Msa1052580-mRNA-1:exon:4770;Parent=Msa1052580-mRNA-1
chr7_2 five_prime_UTR 21413143 21413584 21413143 ID=Msa1052580-mRNA-1:five_prime_utr;Parent=Msa1052580-mRNA-1
chr7_2 CDS 21413585 21416158 21413585 ID=Msa1052580-mRNA-1:cds;Parent=Msa1052580-mRNA-1
chr7_2 CDS 21416983 21417028 21416983 ID=Msa1052580-mRNA-1:cds;Parent=Msa1052580-mRNA-1
chr7_2 CDS 21417104 21417170 21417104 ID=Msa1052580-mRNA-1:cds;Parent=Msa1052580-mRNA-1
chr7_2 CDS 21418305 21418335 21418305 ID=Msa1052580-mRNA-1:cds;Parent=Msa1052580-mRNA-1
chr7_2 three_prime_UTR 21418336 21418618 21418336 ID=Msa1052580-mRNA-1:three_prime_utr;Parent=Msa1052580-mRNA-1
Gene Sequence

>Msa1052580

ATGGTGGGTAACGACGATGCTCGAGCTCCATGCCACCTTTCAAATTCCCGGAAAATGTTTTGGCGTTCAGCTTCATGGTCTTCCGCCCGTTCCGCCGCCGCAAATCCTTCCGGTGAACCGGAATCGAATTTCACCGATCCGAATTCCGGCAGTGGTGGTGGAGATAATACTAACCGGAGATTTCCTCCACCGCCTTTGACGCCAAGGTCACAGCAGAATTGTAAGGCAAGATCATCATGTCTGCCGCCCCTTCAGCCGCTTTCGATTGCTCGCCGGAGTTTAGATGAGTGGCCGAAAGCGAGTTCCGATGATATCGGGGAGTGGCCACAACCACCTATTACTCCTGGTGGGAGAGGTAATGGTAATGGTAATGGTAATGGTAATAGCAGTAGTAGTAATAGTAATAGTAGTAATAATAATGGTGAAAGGTTGAAACTTGATTTGTCTACAATTCAGCAGAATAATAATCCTGATAGTAGGAATAATGGTGGACTTGTGAAGAGAGATAAAATTGCTTTTTTTGATAAAGAATGTTCTAAAGTTGCTGAACATGTTTATCTTGGTGGTGATGCTGTTGCTAGAGATAGAGAGATTTTGAAAAGGAATGGGATTACTCATGTTTTGAATTGTGTTGGTTTTGTGTGTCCTGAGTATTTTAAAGGTGATTTTGTGTATAGGACTTTGTGGTTACAAGATAGTCCTAGTGAGGATATTACTAGTATATTGTATGATGTGTTTGATTACTTTGAGGATGTTAGGGAAAAGAATGGGAGGGTGTTTGTTCATTGTTGTCAAGGGGTGTCGAGGTCGACGTCTCTTGTTATTGCTTATCTTATGTGGAGGGAAGGGCAGAGTTTCGATGATGCTTTTCAGTTTGTGAAGGCGGCGAGAGGTATTGCTGATCCGAATATGGGTTTCGCTTGTCAGTTGTTGCAGTGTCAGAAAAGGGTTCATGCGTTTCCACTTAGTCCAAGCTCTTTGTTGAGAATGTATAGGATTGCTCCTCACTCGCCGTATGATCCTTTGCATCTTGTTCCGAAGATGTTGACGGATCCGTCTTTGTCTGCTTTGGATTCTAGGGGTGCGTTTATTGTGCACATTCCTTCGGCGTTATATGTTTGGATTGGTAAGTATTGTGCGGCTATCATGGAAAGGGATGCTAGAGGGGCTGCGGATCAGATTGTCCGGTATGAGAGAGTGCAAGGATCGATTATCATGATTAAGGAAGGTGAGGAACCACGTTCGTTTTGGGATGCTTTTTCAAAGTTTTTGCCTTTGATGGACATGTCTGGGAGTAGAGTAGAAAGTTGCAAATCAAGTGTTAGAATTTTTCCTGGTGAGAGGAAAGTGGATGCGTTCGATGTTGATTTTGAAGTTTTCAGAAAAGCCATCGTGGGAGGTTTTGTGCCTCCGTTTGCATCATCGGAGAATGATCATGAAACCCATCTTCCTGCAAGAGAGAGTAGTTGGAGTATTTTAAGGCGGAAAAATTCCTGTCCTGATGTGAAGGAGTTTCTCTCAGCCCCTAAGTTATCATTACCAAGGGTTTATTCAGATTCCATGTTGTGCATTCATACATCTGCAAATTCATTTCCATCACCGTCAATGTTGTCAACTGACTCATCTTTATCATCTTCCTCTTCACCTCCTTTTGTTTCTCCAGATTCCATTTCTTCTGATTCTAGCAATCACTCAAAGTTGTTGTTAGAATTATCCCCAGATTCTTCCTCTCTCGTTTTTACTCCCGTCTCAGTATCTTCATCTTTGTCTGGCTTCTCTAATTTGTCTCTCTTGCCAAATTATAGTTCTCAACCAGTGTCCAACTGTACAGATATCCACAGTGTCAAGTTATCGCCACATCTATGTTCTCGATCTGCCTCTTTACCATTGAAAAAACCATCAACTTCCATTGCTGAACGCAGAGGTAGTTTATCGAAATCTTTGAATTTGCCTCTCATGAGTGATAACACAAAAGTATTAGATAAACCATCAACTATTCCTTCCAGTCGGGAACATGGTGTTCTTGTTAACAGCAACTTTAGCTGTGTGCAAGATTCTGACAGTATAGAATATTTGTTCGAGTCCACTGCTAATGTAAAAAATGGAGGTACGAATTCAATTCAACAGTGTGAACCAGCTTCATGTCCAGACATTGCTGATAGCGTGGGCTGCAATGAACCATCAGTTCTCAGGAACTGTGTTGAACCTTCAGTAGATAGTTTATCTGGAGAAGATTTGAAGTCTGCATCATCAAAGGGAGATTACGAGAGTGGCTCGTCGCAGTGTAGTAAGATACAAAGTTTAGTATATCGCTGGCCAAGTTTAGAAAAGATTGAGGCATTTGGTGCAAATCATTTGGGTTCAGAGGCTGCTTTTGCTGTATTCTCTCCAAGCATACATATGCATGCAAGAAACGTTTTGTATATTTGGATAGGGAGTTCTTTCAAACTGGATGCTTCACATGTTCGGTTAGATAGTGATAGACAGCCTGATTTGATTGGGGCAGTTGACTGGAACAAAATTGGTTGTGATCTTCTTGCTCAGTTTAATTTGCCGCACAATACAGTCACCAAGATTGTTAAAGAGAATGAAGAACCACAAGAGTTCCTTGCTCTGCTGACTGTTTCTATGTATGTCAATTTTGAAGGCTCTAATTTGATTTCCCCTGGGAAAAGAAATCCAGCAAGGAGGTTGCCATTTAATGAGAGTCCATTGTAG
Protein sequence

>Msa1052580

MVGNDDARAPCHLSNSRKMFWRSASWSSARSAAANPSGEPESNFTDPNSGSGGGDNTNRRFPPPPLTPRSQQNCKARSSCLPPLQPLSIARRSLDEWPKASSDDIGEWPQPPITPGGRGNGNGNGNGNSSSSNSNSSNNNGERLKLDLSTIQQNNNPDSRNNGGLVKRDKIAFFDKECSKVAEHVYLGGDAVARDREILKRNGITHVLNCVGFVCPEYFKGDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREKNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQFVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLTDPSLSALDSRGAFIVHIPSALYVWIGKYCAAIMERDARGAADQIVRYERVQGSIIMIKEGEEPRSFWDAFSKFLPLMDMSGSRVESCKSSVRIFPGERKVDAFDVDFEVFRKAIVGGFVPPFASSENDHETHLPARESSWSILRRKNSCPDVKEFLSAPKLSLPRVYSDSMLCIHTSANSFPSPSMLSTDSSLSSSSSPPFVSPDSISSDSSNHSKLLLELSPDSSSLVFTPVSVSSSLSGFSNLSLLPNYSSQPVSNCTDIHSVKLSPHLCSRSASLPLKKPSTSIAERRGSLSKSLNLPLMSDNTKVLDKPSTIPSSREHGVLVNSNFSCVQDSDSIEYLFESTANVKNGGTNSIQQCEPASCPDIADSVGCNEPSVLRNCVEPSVDSLSGEDLKSASSKGDYESGSSQCSKIQSLVYRWPSLEKIEAFGANHLGSEAAFAVFSPSIHMHARNVLYIWIGSSFKLDASHVRLDSDRQPDLIGAVDWNKIGCDLLAQFNLPHNTVTKIVKENEEPQEFLALLTVSMYVNFEGSNLISPGKRNPARRLPFNESPL*