AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0693100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0693100 MtrunA17_Chr4g0043411 96.949 590 18 0 1 590 1 590 0.0 1181
Msa0693100 MtrunA17_Chr2g0311581 55.276 635 198 17 1 590 1 594 0.0 596
Msa0693100 MtrunA17_Chr7g0259201 51.692 532 117 8 31 553 1 401 2.60e-165 477
Msa0693100 MtrunA17_Chr7g0259191 49.673 459 124 10 149 590 3 371 1.95e-110 335
Msa0693100 MtrunA17_Chr1g0205721 49.721 179 90 0 35 213 141 319 1.53e-57 196
Msa0693100 MtrunA17_Chr5g0422971 33.600 250 156 6 30 277 5 246 2.69e-41 154
Msa0693100 MtrunA17_Chr5g0397381 32.800 250 158 6 30 277 5 246 3.90e-40 151
Msa0693100 MtrunA17_Chr7g0235101 26.522 230 152 4 44 273 24 236 4.44e-20 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0693100 AT5G45190.1 55.519 607 186 14 1 582 1 548 0.0 597
Msa0693100 AT5G45190.2 54.045 618 189 15 1 582 1 559 0.0 580
Msa0693100 AT4G19600.1 55.705 596 171 13 1 586 1 513 0.0 576
Msa0693100 AT5G45190.3 51.205 498 158 14 111 582 1 439 9.96e-141 417
Msa0693100 AT4G19560.1 48.780 451 175 10 15 462 14 411 3.28e-116 353
Msa0693100 AT1G35440.1 50.607 247 113 2 34 278 7 246 9.21e-86 267
Msa0693100 AT1G27630.1 53.782 238 107 2 32 269 32 266 2.41e-85 269
Msa0693100 AT1G27630.4 53.712 229 103 2 32 260 32 257 9.38e-83 261
Msa0693100 AT4G19560.2 43.767 361 149 9 105 462 30 339 1.23e-67 225
Msa0693100 AT1G27630.6 49.457 184 90 2 86 269 1 181 5.41e-55 186
Msa0693100 AT1G27630.3 49.457 184 90 2 86 269 1 181 5.41e-55 186
Msa0693100 AT1G27630.5 49.457 184 90 2 86 269 1 181 5.41e-55 186
Msa0693100 AT1G27630.2 49.457 184 90 2 86 269 1 181 5.41e-55 186
Msa0693100 AT2G26430.1 33.200 250 157 6 30 277 5 246 1.03e-39 150
Msa0693100 AT2G26430.4 33.200 250 157 6 30 277 5 246 6.20e-37 139
Msa0693100 AT2G26430.3 31.313 198 127 5 82 277 1 191 2.11e-27 114
Msa0693100 AT2G26430.2 31.313 198 127 5 82 277 1 191 2.11e-27 114
Msa0693100 AT5G48630.1 26.009 223 148 4 51 273 31 236 1.33e-16 80.5
Msa0693100 AT5G48630.2 26.009 223 148 4 51 273 34 239 2.93e-16 79.3
Msa0693100 AT5G48640.1 25.854 205 135 3 68 272 48 235 1.27e-14 74.7
Msa0693100 AT5G48640.2 26.733 202 131 4 71 272 3 187 2.72e-14 72.4
Msa0693100 AT5G48640.5 23.626 182 122 2 91 272 3 167 1.20e-11 64.3
Msa0693100 AT5G48640.3 23.626 182 122 2 91 272 3 167 1.20e-11 64.3
Msa0693100 AT5G48640.4 23.626 182 122 2 91 272 3 167 1.20e-11 64.3

Find 176 sgRNAs with CRISPR-Local

Find 517 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCAATCTTGATTGCTTCTT+TGG 0.078252 4_4:-61925529 None:intergenic
CTGACGGAAGCTTCACTTTC+AGG 0.142810 4_4:-61924702 None:intergenic
AGCAACATTGAACTTCTTTA+TGG 0.142833 4_4:-61924468 None:intergenic
CTTCTGACATTTCTTAATTA+TGG 0.157184 4_4:+61926173 Msa0693100:three_prime_UTR
TCAAGACGTTTCTTCGTTTC+TGG 0.177305 4_4:-61926011 None:intergenic
TTCGTTTCTGGTTGACTTGC+TGG 0.211936 4_4:-61925999 None:intergenic
CCTAATTCTGTAGCCTCCTT+TGG 0.222544 4_4:-61925420 None:intergenic
GGAACGGGATGCCTCAATTT+TGG 0.233829 4_4:+61926194 Msa0693100:three_prime_UTR
CCAAAGGAGGCTACAGAATT+AGG 0.239989 4_4:+61925420 Msa0693100:CDS
TTAATAGCTTATGCTTTCTT+TGG 0.244097 4_4:+61926225 Msa0693100:three_prime_UTR
TTTAGTAGTTTCACTTCTTT+AGG 0.246738 4_4:-61926389 None:intergenic
GATGGATTCAATGCAGAAAA+AGG 0.254848 4_4:+61925915 Msa0693100:CDS
GCCACTTTAGCTGTAGTAAA+TGG 0.259714 4_4:+61926512 Msa0693100:three_prime_UTR
GTCTTTGTCAATCATCTTGT+TGG 0.262210 4_4:-61925676 None:intergenic
CTAATTCTGTAGCCTCCTTT+GGG 0.284087 4_4:-61925419 None:intergenic
CTCTCTCTCTATACTATTGT+TGG 0.287887 4_4:-61926453 None:intergenic
GAGAATTTCATGCTGTTGTC+AGG 0.291019 4_4:+61926259 Msa0693100:three_prime_UTR
TGTACATTCTTACAAGATTT+AGG 0.291338 4_4:+61921345 Msa0693100:CDS
TAATAGCTTATGCTTTCTTT+GGG 0.291700 4_4:+61926226 Msa0693100:three_prime_UTR
CTTGCAATTCACGAGGCTTC+AGG 0.292854 4_4:+61919499 Msa0693100:five_prime_UTR
GCCTCGACAAGGGGCTTATA+TGG 0.299564 4_4:-61924446 None:intergenic
CAAGGCTTTACACATATCTA+AGG 0.302357 4_4:+61926476 Msa0693100:three_prime_UTR
CTGCACTCCCATCATTGCTT+TGG 0.304701 4_4:-61925281 None:intergenic
TCAATCTTGATTGCTTCTTT+GGG 0.317346 4_4:-61925528 None:intergenic
GGCTTCTCTTCTCTACCTTC+TGG 0.319081 4_4:+61919520 Msa0693100:five_prime_UTR
GAATCGATGACAAAATATTA+TGG 0.323728 4_4:-61921804 None:intergenic
GGGTTAGTTGCACTGTTGAC+TGG 0.342169 4_4:-61921128 None:intergenic
GAAGCAGAAGGGGCTGCTGC+AGG 0.353238 4_4:+61925129 Msa0693100:CDS
GTTTCGTCGTGTTCGGCAAT+TGG 0.356817 4_4:-61919477 None:intergenic
CCCGACAAAGATAAACTTGT+TGG 0.366292 4_4:+61925375 Msa0693100:CDS
ACTCAAAATGAATTAGAATA+GGG 0.371597 4_4:+61926338 Msa0693100:three_prime_UTR
GAACTTGGCAGCAAGGAAAA+TGG 0.372793 4_4:-61924680 None:intergenic
TTTATTTGCTTAATGTGATA+AGG 0.377884 4_4:+61926121 Msa0693100:three_prime_UTR
ACATTTCTTAATTATGGAAC+GGG 0.377979 4_4:+61926179 Msa0693100:three_prime_UTR
TTATCACATTAAGCAAATAA+AGG 0.378007 4_4:-61926119 None:intergenic
CAATGATGGGAGTGCAGAAA+TGG 0.380246 4_4:+61925287 Msa0693100:CDS
CTTCAATGTTGGTCAAAATC+TGG 0.381107 4_4:+61925476 Msa0693100:CDS
TCCAACAAGTTTATCTTTGT+CGG 0.386957 4_4:-61925376 None:intergenic
TTTATCCTCTGTGCAGCAGC+AGG 0.390517 4_4:-61923227 None:intergenic
CAGACACAAGTGCTGCCATA+TGG 0.396129 4_4:-61921149 None:intergenic
AAGAAACACTAGCAGATTAC+TGG 0.397858 4_4:-61926364 None:intergenic
TATGATGTGGCTTAAATTGT+AGG 0.409195 4_4:-61924645 None:intergenic
GCTTCACTTCCTTGTGATTG+TGG 0.410396 4_4:-61925111 None:intergenic
TACTCAAAATGAATTAGAAT+AGG 0.411849 4_4:+61926337 Msa0693100:three_prime_UTR
TTCTGAGGTCTGAGAATCCC+TGG 0.414945 4_4:-61925346 None:intergenic
ATTGCAAGTTTCGTCGTGTT+CGG 0.419483 4_4:-61919484 None:intergenic
TGATGTCACCCCACGCCAAT+TGG 0.422376 4_4:+61924753 Msa0693100:CDS
GCATGGAACTTTGTTAATGA+TGG 0.427217 4_4:+61924512 Msa0693100:CDS
GAGGGTTGTACTTGCCACTT+TGG 0.427992 4_4:+61924400 Msa0693100:CDS
CCAACAAGTTTATCTTTGTC+GGG 0.428315 4_4:-61925375 None:intergenic
AAGCAGAAGGGGCTGCTGCA+GGG 0.429292 4_4:+61925130 Msa0693100:CDS
AGAGACTCCTCGTCCTCTTA+AGG 0.429831 4_4:+61923163 Msa0693100:CDS
AAGCTTCACTTTCAGGAACT+TGG 0.431818 4_4:-61924695 None:intergenic
TCACCATGATCTTCATCATC+AGG 0.433315 4_4:-61925867 None:intergenic
CGTCAGACGGTGAGAAGGTC+TGG 0.435777 4_4:+61924719 Msa0693100:CDS
CATATGGCAGCACTTGTGTC+TGG 0.444420 4_4:+61921150 Msa0693100:exon
ACCGAAAACCAAAGCAATGA+TGG 0.455608 4_4:+61925273 Msa0693100:CDS
ACCATTTACTACAGCTAAAG+TGG 0.456702 4_4:-61926513 None:intergenic
GACGATAAAGAAAGATGTAA+TGG 0.462192 4_4:+61925605 Msa0693100:CDS
GACATTAAAGAAAGATGTAA+TGG 0.462660 4_4:+61925746 Msa0693100:CDS
GGGAGCGAGAGCTGCTGCAA+GGG 0.466897 4_4:+61925152 Msa0693100:CDS
GATGGCACCAACCCTCCAAT+TGG 0.470978 4_4:-61924768 None:intergenic
ATGAGAATAACATCCTTAAG+AGG 0.474735 4_4:-61923176 None:intergenic
AGCAGAAGGGGCTGCTGCAG+GGG 0.477059 4_4:+61925131 Msa0693100:CDS
ACCTTGAGGAGGCTAGAGAC+GGG 0.482848 4_4:+61925892 Msa0693100:CDS
CGGTGAGAAGGTCTGGTGGC+AGG 0.483751 4_4:+61924726 Msa0693100:CDS
ATCCTTCCCATCCCCTTACT+CGG 0.488602 4_4:-61926057 None:intergenic
ACCAACCCTCCAATTGGCGT+GGG 0.488824 4_4:-61924762 None:intergenic
AAGAAGAAGCATTGGGTCGC+TGG 0.490936 4_4:+61921232 Msa0693100:CDS
AGAATTTCATGCTGTTGTCA+GGG 0.491351 4_4:+61926260 Msa0693100:three_prime_UTR
AATGCTCCGTCAAGAAAAGA+TGG 0.494895 4_4:+61921282 Msa0693100:CDS
TGGTCAAAATCTGGAGCGTC+GGG 0.495188 4_4:+61925485 Msa0693100:CDS
GCAGAAGGGGCTGCTGCAGG+GGG 0.499172 4_4:+61925132 Msa0693100:CDS
GACATTTCTTAATTATGGAA+CGG 0.500098 4_4:+61926178 Msa0693100:three_prime_UTR
GCTTGAAGATGGAGTAGAGT+TGG 0.501501 4_4:+61925794 Msa0693100:CDS
TTGCATTACTACCAAAATTG+AGG 0.502018 4_4:-61926289 None:intergenic
AAGCCACATCATATTGCGGC+AGG 0.507122 4_4:+61924655 Msa0693100:CDS
CTTTCAGGAACTTGGCAGCA+AGG 0.508345 4_4:-61924687 None:intergenic
GAGCGTCGGGAAGGCCCACT+TGG 0.512626 4_4:+61925498 Msa0693100:CDS
AGATAAGCAAGAAGAAGCAT+TGG 0.512627 4_4:+61921224 Msa0693100:CDS
ATTGAGAGGGAGCTTGAAGA+TGG 0.513193 4_4:+61925642 Msa0693100:CDS
ATTGAGAGGGAGCTTGAAGA+TGG 0.513193 4_4:+61925783 Msa0693100:CDS
AACAGTGCAACTAACCCATA+TGG 0.513524 4_4:+61921134 Msa0693100:exon
TTCTTTATGGCCTCGACAAG+GGG 0.513974 4_4:-61924455 None:intergenic
AGACACAAGTGCTGCCATAT+GGG 0.513981 4_4:-61921148 None:intergenic
AAAGAAAGATGTAATGGATG+AGG 0.521411 4_4:+61925611 Msa0693100:CDS
ACAAGATGGACTCGGAAACC+AGG 0.523113 4_4:+61925328 Msa0693100:CDS
TCCTGCGATGAGTGAAGAGC+AGG 0.524474 4_4:+61925176 Msa0693100:CDS
CAAGGGGCTTATATGGATGT+TGG 0.524723 4_4:-61924439 None:intergenic
CATGGAACTTTGTTAATGAT+GGG 0.529596 4_4:+61924513 Msa0693100:CDS
TGTCACCCCACGCCAATTGG+AGG 0.530719 4_4:+61924756 Msa0693100:CDS
GAACAATCGCAAGAGAAAGA+AGG 0.530737 4_4:+61925968 Msa0693100:CDS
TAGCTTATGCTTTCTTTGGG+GGG 0.531506 4_4:+61926229 Msa0693100:three_prime_UTR
TAATTGCACTACCAAAATTG+AGG 0.532832 4_4:-61926205 None:intergenic
GGGGAGCGAGAGCTGCTGCA+AGG 0.533292 4_4:+61925151 Msa0693100:CDS
TTGGTCAAAATCTGGAGCGT+CGG 0.534668 4_4:+61925484 Msa0693100:CDS
AATCAAGATTGACAAAGATA+AGG 0.536877 4_4:+61925539 Msa0693100:CDS
GACCTTGAGGAGGCTAGAGA+CGG 0.538134 4_4:+61925891 Msa0693100:CDS
CACCAACCCTCCAATTGGCG+TGG 0.539896 4_4:-61924763 None:intergenic
GGTTAGTTGCACTGTTGACT+GGG 0.542770 4_4:-61921127 None:intergenic
GGAGCGAGAGCTGCTGCAAG+GGG 0.545688 4_4:+61925153 Msa0693100:CDS
GCCTGCTCTTCACTCATCGC+AGG 0.545877 4_4:-61925177 None:intergenic
AATGATGGGAGTGCAGAAAT+GGG 0.546932 4_4:+61925288 Msa0693100:CDS
AACAAGTCTAGCTTCAATGT+TGG 0.549540 4_4:+61925465 Msa0693100:CDS
AGAAGTTAGCAATCAAATGT+TGG 0.552225 4_4:+61925065 Msa0693100:intron
GATAAGCAAGAAGAAGCATT+GGG 0.552512 4_4:+61921225 Msa0693100:CDS
AGAGAAACTTGTTGCCCCAA+AGG 0.553413 4_4:+61925404 Msa0693100:CDS
AGTTCCATGCAACTTGTGCA+AGG 0.554121 4_4:-61924499 None:intergenic
TCTGGAGAGTTGCCACATCA+TGG 0.557018 4_4:+61921168 Msa0693100:CDS
TTTCCACAGATGAGCACTGA+GGG 0.558715 4_4:-61925227 None:intergenic
CTTCTTTATGGCCTCGACAA+GGG 0.558922 4_4:-61924456 None:intergenic
CACAAGGAAGTGAAGCAGAA+GGG 0.559027 4_4:+61925118 Msa0693100:CDS
AACAATCGCAAGAGAAAGAA+GGG 0.561015 4_4:+61925969 Msa0693100:CDS
GGAAGATGCAGCAAAGGTCG+AGG 0.562151 4_4:-61919456 None:intergenic
CCCCGTCTCTAGCCTCCTCA+AGG 0.562396 4_4:-61925893 None:intergenic
GATTGACAAAGATAAGGTAA+AGG 0.564547 4_4:+61925545 Msa0693100:CDS
ATAGCTTATGCTTTCTTTGG+GGG 0.565752 4_4:+61926228 Msa0693100:three_prime_UTR
AATAGCTTATGCTTTCTTTG+GGG 0.570413 4_4:+61926227 Msa0693100:three_prime_UTR
ACTTCTTTATGGCCTCGACA+AGG 0.571121 4_4:-61924457 None:intergenic
TTATCCTCTGTGCAGCAGCA+GGG 0.572300 4_4:-61923226 None:intergenic
TTCCGAGTAAGGGGATGGGA+AGG 0.576072 4_4:+61926055 Msa0693100:exon
ACGCCCTTGCACAAGTTGCA+TGG 0.578134 4_4:+61924495 Msa0693100:CDS
TGATAAGGAATTGATGACTC+TGG 0.578618 4_4:+61926136 Msa0693100:three_prime_UTR
TAATTCTGTAGCCTCCTTTG+GGG 0.580016 4_4:-61925418 None:intergenic
AATAGTATAGAGAGAGAGCA+AGG 0.581744 4_4:+61926458 Msa0693100:three_prime_UTR
CCGAAAACCAAAGCAATGAT+GGG 0.583069 4_4:+61925274 Msa0693100:CDS
CCGTCAGATGCTCCATGATG+TGG 0.583282 4_4:-61921180 None:intergenic
CATAATTAAGAAATGTCAGA+AGG 0.586172 4_4:-61926172 None:intergenic
CAAAATCTGGAGCGTCGGGA+AGG 0.591685 4_4:+61925489 Msa0693100:CDS
CTTTGGGTGACTGACCAAGT+GGG 0.592539 4_4:-61925512 None:intergenic
AAAGTGAAGCTTCCGTCAGA+CGG 0.595709 4_4:+61924706 Msa0693100:CDS
CGAGGATGATCTCATTGAGA+GGG 0.600498 4_4:+61925770 Msa0693100:CDS
TCACAAGGAAGTGAAGCAGA+AGG 0.601746 4_4:+61925117 Msa0693100:CDS
TCCATATAAGCCCCTTGTCG+AGG 0.604206 4_4:+61924445 Msa0693100:CDS
GCTTCCGTCAGACGGTGAGA+AGG 0.605256 4_4:+61924714 Msa0693100:CDS
GTCACCCCACGCCAATTGGA+GGG 0.605796 4_4:+61924757 Msa0693100:CDS
ATTCAAGTCAAAAGCCAAAG+TGG 0.607668 4_4:-61924414 None:intergenic
ACAAGGAAGTGAAGCAGAAG+GGG 0.610265 4_4:+61925119 Msa0693100:CDS
GAATTTCATGCTGTTGTCAG+GGG 0.610576 4_4:+61926261 Msa0693100:three_prime_UTR
CTCATGCAAAGAATGACCGA+AGG 0.612140 4_4:+61921840 Msa0693100:CDS
CCACATCATGGAGCATCTGA+CGG 0.614623 4_4:+61921180 Msa0693100:CDS
GAAACTTGTTGCCCCAAAGG+AGG 0.614964 4_4:+61925407 Msa0693100:CDS
AGGAGGCTACAGAATTAGGA+AGG 0.615379 4_4:+61925424 Msa0693100:CDS
GAGGAGGCTAGAGACGGGGA+TGG 0.615541 4_4:+61925897 Msa0693100:CDS
GCAATTGGAAGATGCAGCAA+AGG 0.615685 4_4:-61919462 None:intergenic
TCTTTGGGTGACTGACCAAG+TGG 0.615707 4_4:-61925513 None:intergenic
TGAGGATGATCTCATTGAGA+GGG 0.615735 4_4:+61925629 Msa0693100:CDS
TGACATTACTGATCACAAGA+TGG 0.617081 4_4:+61925314 Msa0693100:CDS
AGATCATGGTGAGGACCTTG+AGG 0.617441 4_4:+61925878 Msa0693100:CDS
TCCACAGATGAGCACTGAGG+GGG 0.619491 4_4:-61925225 None:intergenic
GCTGTTGCTATAGTTACTTG+AGG 0.621138 4_4:-61921782 None:intergenic
CAGACCTTCTCACCGTCTGA+CGG 0.622614 4_4:-61924718 None:intergenic
AAGGCTTTACACATATCTAA+GGG 0.624719 4_4:+61926477 Msa0693100:three_prime_UTR
GTTCCATGCAACTTGTGCAA+GGG 0.625785 4_4:-61924498 None:intergenic
ATGAGGATGATCTCATTGAG+AGG 0.630170 4_4:+61925628 Msa0693100:CDS
AAAGAAAGATGTAATGGACG+AGG 0.631127 4_4:+61925752 Msa0693100:CDS
AAGCCTGATGATGAAGATCA+TGG 0.631489 4_4:+61925864 Msa0693100:CDS
ATAACATCCTTAAGAGGACG+AGG 0.631649 4_4:-61923170 None:intergenic
ACGAGGATGATCTCATTGAG+AGG 0.632466 4_4:+61925769 Msa0693100:CDS
CAAGATGGACTCGGAAACCA+GGG 0.633256 4_4:+61925329 Msa0693100:CDS
ATTTAAGCCACATCATATTG+CGG 0.635161 4_4:+61924651 Msa0693100:CDS
AATTTCATGCTGTTGTCAGG+GGG 0.638756 4_4:+61926262 Msa0693100:three_prime_UTR
TACTGATCACAAGATGGACT+CGG 0.641859 4_4:+61925320 Msa0693100:CDS
TGCACAGAGGATAAAACAGA+AGG 0.652187 4_4:+61923235 Msa0693100:CDS
TCATGCAAAGAATGACCGAA+GGG 0.662631 4_4:+61921841 Msa0693100:CDS
CCTTGAGGAGGCTAGAGACG+GGG 0.664202 4_4:+61925893 Msa0693100:CDS
CCAACCCTCCAATTGGCGTG+GGG 0.665875 4_4:-61924761 None:intergenic
TCATGGTGAGGACCTTGAGG+AGG 0.679281 4_4:+61925881 Msa0693100:CDS
GACGAAACTTGCAATTCACG+AGG 0.693484 4_4:+61919492 Msa0693100:five_prime_UTR
TTCCACAGATGAGCACTGAG+GGG 0.694472 4_4:-61925226 None:intergenic
AATAGAATTCCACAATCACA+AGG 0.696079 4_4:+61925102 Msa0693100:CDS
TGATGATGAAGATCATGGTG+AGG 0.696108 4_4:+61925869 Msa0693100:CDS
CAGACGGTGAGAAGGTCTGG+TGG 0.696264 4_4:+61924722 Msa0693100:CDS
GCACCTGCCGCAATATGATG+TGG 0.706575 4_4:-61924658 None:intergenic
AAGACCCTGCTGCTGCACAG+AGG 0.732068 4_4:+61923222 Msa0693100:CDS
AATCTGAAACACAAATAACG+TGG 0.755631 4_4:+61919377 Msa0693100:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAATATGTTTATATTTG+TGG + chr4_4:61921630-61921649 Msa0693100:intron 10.0%
!!! ATATTCTAAAAATATGTTTA+AGG + chr4_4:61922685-61922704 Msa0693100:intron 10.0%
!!! GTTGATTATTTTTTTTTTTT+GGG + chr4_4:61922892-61922911 Msa0693100:intron 10.0%
!!! TTTATTGAATTCATTTTAAT+AGG + chr4_4:61924571-61924590 Msa0693100:intron 10.0%
!! ATTTCAATTTCAATTTCAAT+TGG + chr4_4:61919670-61919689 Msa0693100:intron 15.0%
!! TTTCAATTTCAATTTCAATT+GGG + chr4_4:61919671-61919690 Msa0693100:intron 15.0%
!! AACAAAATAATGAATATCAT+TGG - chr4_4:61921045-61921064 None:intergenic 15.0%
!! GAATAGGAAATAAATATTTA+CGG - chr4_4:61921710-61921729 None:intergenic 15.0%
!!! GGTTGATTATTTTTTTTTTT+TGG + chr4_4:61922891-61922910 Msa0693100:intron 15.0%
!! AAACTTAAAAGAATACTTAT+TGG + chr4_4:61923063-61923082 Msa0693100:intron 15.0%
!! AACTTAAAAGAATACTTATT+GGG + chr4_4:61923064-61923083 Msa0693100:intron 15.0%
!! AATAAATAGAATTAATTGCA+TGG + chr4_4:61924125-61924144 Msa0693100:intron 15.0%
!! TCAACAAACAAATATAATAA+GGG - chr4_4:61924317-61924336 None:intergenic 15.0%
!! TTCAACAAACAAATATAATA+AGG - chr4_4:61924318-61924337 None:intergenic 15.0%
!! AAGTTTACTATTATTTAAAC+AGG + chr4_4:61924971-61924990 Msa0693100:intron 15.0%
!! GAATTCGTATATTAAATGTT+GGG + chr4_4:61919854-61919873 Msa0693100:intron 20.0%
!!! TTTTCTATAATCTCATGATT+TGG + chr4_4:61920829-61920848 Msa0693100:intron 20.0%
!! TTTCTATAATCTCATGATTT+GGG + chr4_4:61920830-61920849 Msa0693100:intron 20.0%
!! TTACATGCATATTATGTATT+TGG + chr4_4:61921429-61921448 Msa0693100:intron 20.0%
!!! AAATTGCTTTTAAATGTACT+TGG + chr4_4:61921670-61921689 Msa0693100:intron 20.0%
!!! AATTGCTTTTAAATGTACTT+GGG + chr4_4:61921671-61921690 Msa0693100:intron 20.0%
!!! CTTTCAAATAGATATTTTGT+AGG + chr4_4:61921873-61921892 Msa0693100:intron 20.0%
!! AAAAAAATTCAAAACCAAAC+AGG - chr4_4:61922127-61922146 None:intergenic 20.0%
!!! AGATAGCTCAAATTTTAAAA+TGG + chr4_4:61922305-61922324 Msa0693100:intron 20.0%
!!! ATGCTAATTACAATTTTAGT+TGG + chr4_4:61922551-61922570 Msa0693100:intron 20.0%
!! AACAAATTTCAATATTGAGA+AGG - chr4_4:61922654-61922673 None:intergenic 20.0%
!! AAAAACTCAACTTAAAAACA+TGG - chr4_4:61922802-61922821 None:intergenic 20.0%
!! ATCTATCATTCATATAAACT+AGG - chr4_4:61923030-61923049 None:intergenic 20.0%
!!! TTTTTTTGCTTGTATTTGAA+AGG - chr4_4:61923623-61923642 None:intergenic 20.0%
!! ATATGAATAAAAGAGGTTAT+TGG + chr4_4:61923973-61923992 Msa0693100:intron 20.0%
!! TAAGCATGATATCATTAAAT+AGG + chr4_4:61924021-61924040 Msa0693100:intron 20.0%
!! AAGCATGATATCATTAAATA+GGG + chr4_4:61924022-61924041 Msa0693100:intron 20.0%
!! AATCACAAAAATTTCGAATT+CGG - chr4_4:61924083-61924102 None:intergenic 20.0%
!!! TTTGTGATTATATTTGAAAC+TGG + chr4_4:61924094-61924113 Msa0693100:intron 20.0%
!! ATAGAATTTGTAAATGATGT+AGG + chr4_4:61924337-61924356 Msa0693100:intron 20.0%
!!! CAGAAAGAATTAATTTTACT+TGG + chr4_4:61924374-61924393 Msa0693100:CDS 20.0%
!! TTATCACATTAAGCAAATAA+AGG - chr4_4:61926122-61926141 None:intergenic 20.0%
!! TTTATTTGCTTAATGTGATA+AGG + chr4_4:61926121-61926140 Msa0693100:three_prime_UTR 20.0%
!!! ATTTTGAGTAATTCTTAACA+GGG - chr4_4:61926327-61926346 None:intergenic 20.0%
!! TACTCAAAATGAATTAGAAT+AGG + chr4_4:61926337-61926356 Msa0693100:three_prime_UTR 20.0%
!! ACTCAAAATGAATTAGAATA+GGG + chr4_4:61926338-61926357 Msa0693100:three_prime_UTR 20.0%
! AGATAAAGAAAACAAATCGA+AGG - chr4_4:61919559-61919578 None:intergenic 25.0%
!!! TTTATTGATTCAAACCCTAT+CGG + chr4_4:61919740-61919759 Msa0693100:intron 25.0%
! TAAAAATCTTATCTGAGTTG+TGG + chr4_4:61919832-61919851 Msa0693100:intron 25.0%
! GGAATTCGTATATTAAATGT+TGG + chr4_4:61919853-61919872 Msa0693100:intron 25.0%
!! GTTTTACACAAATTTGACAA+AGG - chr4_4:61919890-61919909 None:intergenic 25.0%
! ATTTGTGTAAAACGAAGATT+AGG + chr4_4:61919897-61919916 Msa0693100:intron 25.0%
! TTTGTGTAAAACGAAGATTA+GGG + chr4_4:61919898-61919917 Msa0693100:intron 25.0%
!!! AACGAACAGTTTTGAAAATT+AGG + chr4_4:61919935-61919954 Msa0693100:intron 25.0%
!! AGTATACACTGAATGTTTTT+CGG + chr4_4:61920078-61920097 Msa0693100:intron 25.0%
! AAAAAACCTATTTCCTATAC+AGG - chr4_4:61920268-61920287 None:intergenic 25.0%
! TGATTGCACAAATAATTGAT+GGG - chr4_4:61920310-61920329 None:intergenic 25.0%
! ATGATTGCACAAATAATTGA+TGG - chr4_4:61920311-61920330 None:intergenic 25.0%
! CAATCATATGCTATCTTTAT+GGG + chr4_4:61920324-61920343 Msa0693100:intron 25.0%
!!! GATTTTTGTCATTTTCATCT+GGG + chr4_4:61920346-61920365 Msa0693100:intron 25.0%
!!! ATTTTTGTCATTTTCATCTG+GGG + chr4_4:61920347-61920366 Msa0693100:intron 25.0%
! AAAAACCCTATTTCCTATAT+GGG - chr4_4:61920487-61920506 None:intergenic 25.0%
! AAAAAACCCTATTTCCTATA+TGG - chr4_4:61920488-61920507 None:intergenic 25.0%
!! ATGCAATGTATTTAAAATCG+AGG - chr4_4:61920908-61920927 None:intergenic 25.0%
! AAATAATGAATATCATTGGC+CGG - chr4_4:61921041-61921060 None:intergenic 25.0%
! TGTACATTCTTACAAGATTT+AGG + chr4_4:61921345-61921364 Msa0693100:CDS 25.0%
! ATACATAATATGCATGTAAC+TGG - chr4_4:61921428-61921447 None:intergenic 25.0%
!!! ATGTATTTGGAATTCTTTTG+AGG + chr4_4:61921442-61921461 Msa0693100:intron 25.0%
!!! TGTATTTGGAATTCTTTTGA+GGG + chr4_4:61921443-61921462 Msa0693100:intron 25.0%
!! CATACGATTTTGTATCTTAA+TGG + chr4_4:61921514-61921533 Msa0693100:intron 25.0%
! TCCTATTCTTGAAATTCAAT+TGG + chr4_4:61921722-61921741 Msa0693100:intron 25.0%
! TCCAATTGAATTTCAAGAAT+AGG - chr4_4:61921726-61921745 None:intergenic 25.0%
! TATTCTTGAAATTCAATTGG+AGG + chr4_4:61921725-61921744 Msa0693100:intron 25.0%
! GAATCGATGACAAAATATTA+TGG - chr4_4:61921807-61921826 None:intergenic 25.0%
! TCAAATTAAAAACAACACAC+AGG - chr4_4:61922019-61922038 None:intergenic 25.0%
! AAATAGTTCTTACAAAGCTT+AGG + chr4_4:61922241-61922260 Msa0693100:intron 25.0%
! CTTAAAGACATTCAAGAAAA+AGG - chr4_4:61922825-61922844 None:intergenic 25.0%
!!! TAGTCAAATTTGCACTTTTT+GGG + chr4_4:61922868-61922887 Msa0693100:intron 25.0%
!!! AGAAGGTGTTTTAATATTGT+TGG + chr4_4:61923252-61923271 Msa0693100:intron 25.0%
! CACAGATAAATCAAGAAATT+GGG - chr4_4:61923311-61923330 None:intergenic 25.0%
! TCACAGATAAATCAAGAAAT+TGG - chr4_4:61923312-61923331 None:intergenic 25.0%
! GAAAAGCAAGAAAAAAATGT+TGG - chr4_4:61923358-61923377 None:intergenic 25.0%
!! ACTCAGTTTAAGACTATAAT+TGG - chr4_4:61923386-61923405 None:intergenic 25.0%
! TGTATAGGATTTCAATATTG+AGG - chr4_4:61923526-61923545 None:intergenic 25.0%
! TGTTTCATGTGTTGAAATTT+AGG + chr4_4:61923736-61923755 Msa0693100:intron 25.0%
! GTTTCATGTGTTGAAATTTA+GGG + chr4_4:61923737-61923756 Msa0693100:intron 25.0%
! TCCAACAATATGAATAAAAG+AGG + chr4_4:61923966-61923985 Msa0693100:intron 25.0%
!! ACCTCTTTTATTCATATTGT+TGG - chr4_4:61923970-61923989 None:intergenic 25.0%
! AGAGCAACTATAGAATAAAA+TGG - chr4_4:61924186-61924205 None:intergenic 25.0%
! ATAAACAAAATACAAAGAGC+GGG - chr4_4:61924284-61924303 None:intergenic 25.0%
! GATAAACAAAATACAAAGAG+CGG - chr4_4:61924285-61924304 None:intergenic 25.0%
! AACAAATATAATAAGGGTCA+TGG - chr4_4:61924311-61924330 None:intergenic 25.0%
!! AATTAATTTTACTTGGAGAG+AGG + chr4_4:61924381-61924400 Msa0693100:CDS 25.0%
!! ATTAATTTTACTTGGAGAGA+GGG + chr4_4:61924382-61924401 Msa0693100:CDS 25.0%
! AAGTAAAATTAGAACAAGTG+TGG - chr4_4:61924553-61924572 None:intergenic 25.0%
! TTAGTATGCAAATGAATTGA+GGG - chr4_4:61924794-61924813 None:intergenic 25.0%
! AAAAAGCCTAATGAAAAAGT+GGG - chr4_4:61924945-61924964 None:intergenic 25.0%
! AAAAAAGCCTAATGAAAAAG+TGG - chr4_4:61924946-61924965 None:intergenic 25.0%
! AATCAAGATTGACAAAGATA+AGG + chr4_4:61925539-61925558 Msa0693100:CDS 25.0%
! TAAAGGCCATATTAGAAAAA+AGG + chr4_4:61925562-61925581 Msa0693100:CDS 25.0%
!!! CTTTCTCCTTTTTTCTAATA+TGG - chr4_4:61925571-61925590 None:intergenic 25.0%
! CATATTAGAAAAAAGGAGAA+AGG + chr4_4:61925569-61925588 Msa0693100:CDS 25.0%
! GACATTAAAGAAAGATGTAA+TGG + chr4_4:61925746-61925765 Msa0693100:CDS 25.0%
! GGAAAAATCATTGTGATAAT+TGG - chr4_4:61926039-61926058 None:intergenic 25.0%
!! GAAGAGAAAAATATTTGTTG+AGG + chr4_4:61926081-61926100 Msa0693100:three_prime_UTR 25.0%
! CATAATTAAGAAATGTCAGA+AGG - chr4_4:61926175-61926194 None:intergenic 25.0%
! CTTCTGACATTTCTTAATTA+TGG + chr4_4:61926173-61926192 Msa0693100:three_prime_UTR 25.0%
! GACATTTCTTAATTATGGAA+CGG + chr4_4:61926178-61926197 Msa0693100:three_prime_UTR 25.0%
! ACATTTCTTAATTATGGAAC+GGG + chr4_4:61926179-61926198 Msa0693100:three_prime_UTR 25.0%
! TTAATAGCTTATGCTTTCTT+TGG + chr4_4:61926225-61926244 Msa0693100:three_prime_UTR 25.0%
! TAATAGCTTATGCTTTCTTT+GGG + chr4_4:61926226-61926245 Msa0693100:three_prime_UTR 25.0%
!!! CATTTTGAGTAATTCTTAAC+AGG - chr4_4:61926328-61926347 None:intergenic 25.0%
! TTTAGTAGTTTCACTTCTTT+AGG - chr4_4:61926392-61926411 None:intergenic 25.0%
! AATCTGAAACACAAATAACG+TGG + chr4_4:61919377-61919396 Msa0693100:five_prime_UTR 30.0%
CAAAATCGAAAAAACGAAAG+AGG - chr4_4:61919592-61919611 None:intergenic 30.0%
GTATGAGATAAAGCGATAAA+TGG - chr4_4:61919634-61919653 None:intergenic 30.0%
!! TGAATGTTTTTCGGTGAAAT+TGG + chr4_4:61920087-61920106 Msa0693100:intron 30.0%
!! GAATGTTTTTCGGTGAAATT+GGG + chr4_4:61920088-61920107 Msa0693100:intron 30.0%
!!! AAAAACCTGTTTTTACATGC+AGG + chr4_4:61920202-61920221 Msa0693100:intron 30.0%
AGAAAACCTGTATAGGAAAT+AGG + chr4_4:61920259-61920278 Msa0693100:intron 30.0%
!!! TGATGGGCTTGTTTTTTTAA+GGG - chr4_4:61920294-61920313 None:intergenic 30.0%
!!! TTGATGGGCTTGTTTTTTTA+AGG - chr4_4:61920295-61920314 None:intergenic 30.0%
GCAATCATATGCTATCTTTA+TGG + chr4_4:61920323-61920342 Msa0693100:intron 30.0%
!!! GGATTTTTGTCATTTTCATC+TGG + chr4_4:61920345-61920364 Msa0693100:intron 30.0%
!!! AAAAGACCTGTTTTTACATG+CGG + chr4_4:61920420-61920439 Msa0693100:intron 30.0%
AGAAAACCCATATAGGAAAT+AGG + chr4_4:61920478-61920497 Msa0693100:intron 30.0%
GAAAACCCATATAGGAAATA+GGG + chr4_4:61920479-61920498 Msa0693100:intron 30.0%
AAAAAGTTGTAGGGAACATA+GGG - chr4_4:61920594-61920613 None:intergenic 30.0%
! GTTTTGCGCAAAATTTGAAA+GGG - chr4_4:61920886-61920905 None:intergenic 30.0%
!!! CCTTTGCTATTGATTTTGTA+CGG + chr4_4:61920983-61921002 Msa0693100:intron 30.0%
AATAATGAATATCATTGGCC+GGG - chr4_4:61921040-61921059 None:intergenic 30.0%
! TCAATTCCATCTTTTCTTGA+CGG - chr4_4:61921291-61921310 None:intergenic 30.0%
!! GTATTTGGAATTCTTTTGAG+GGG + chr4_4:61921444-61921463 Msa0693100:intron 30.0%
ATGCAACTTACAAAAGATCA+GGG - chr4_4:61921910-61921929 None:intergenic 30.0%
AATGCAACTTACAAAAGATC+AGG - chr4_4:61921911-61921930 None:intergenic 30.0%
!!! AGTTGCATTTTGATTTAGTG+TGG + chr4_4:61921922-61921941 Msa0693100:intron 30.0%
TGTTTGTGCAATTGATATAG+TGG + chr4_4:61921947-61921966 Msa0693100:intron 30.0%
AACTCATAGTTTAAGAGCTT+CGG - chr4_4:61922271-61922290 None:intergenic 30.0%
AAGCTCTTAAACTATGAGTT+GGG + chr4_4:61922271-61922290 Msa0693100:intron 30.0%
CTATAGAAGAACAACAAATC+TGG - chr4_4:61922744-61922763 None:intergenic 30.0%
!! CAGATTTGTTGTTCTTCTAT+AGG + chr4_4:61922742-61922761 Msa0693100:intron 30.0%
! GTAGTCAAATTTGCACTTTT+TGG + chr4_4:61922867-61922886 Msa0693100:intron 30.0%
!! AGTCAAATTTGCACTTTTTG+GGG + chr4_4:61922869-61922888 Msa0693100:intron 30.0%
!! GTATTTGTGTAAGTTGATTG+TGG + chr4_4:61922997-61923016 Msa0693100:intron 30.0%
TGCAAAAGAAATTCGTCAAT+TGG - chr4_4:61923101-61923120 None:intergenic 30.0%
ATGAGAATAACATCCTTAAG+AGG - chr4_4:61923179-61923198 None:intergenic 30.0%
ATCTGTGATCTTATTGCTAT+TGG + chr4_4:61923324-61923343 Msa0693100:intron 30.0%
! TCATAATTTGTGCTCAAACA+TGG + chr4_4:61923491-61923510 Msa0693100:intron 30.0%
! GTTTTCGTATGTCTTTTACT+CGG + chr4_4:61923573-61923592 Msa0693100:intron 30.0%
! TTTTCGTATGTCTTTTACTC+GGG + chr4_4:61923574-61923593 Msa0693100:intron 30.0%
GTATTTGAAAGGAAACAGAA+TGG - chr4_4:61923612-61923631 None:intergenic 30.0%
TAACTCATCCTTACAAAAAC+CGG + chr4_4:61923762-61923781 Msa0693100:intron 30.0%
CTTGAGAAGAGTTTATAAAG+AGG - chr4_4:61923809-61923828 None:intergenic 30.0%
TAAACAAAATACAAAGAGCG+GGG - chr4_4:61924283-61924302 None:intergenic 30.0%
AGCAACATTGAACTTCTTTA+TGG - chr4_4:61924471-61924490 None:intergenic 30.0%
CATGGAACTTTGTTAATGAT+GGG + chr4_4:61924513-61924532 Msa0693100:CDS 30.0%
TATGATGTGGCTTAAATTGT+AGG - chr4_4:61924648-61924667 None:intergenic 30.0%
ATTTAAGCCACATCATATTG+CGG + chr4_4:61924651-61924670 Msa0693100:CDS 30.0%
TAGTATGCAAATGAATTGAG+GGG - chr4_4:61924793-61924812 None:intergenic 30.0%
CTTAGTATGCAAATGAATTG+AGG - chr4_4:61924795-61924814 None:intergenic 30.0%
! ACTAAGAAAGTTGATCCAAT+TGG + chr4_4:61924809-61924828 Msa0693100:intron 30.0%
AACACACAAAACTATCCAAT+TGG - chr4_4:61924827-61924846 None:intergenic 30.0%
!!! AATTGGATAGTTTTGTGTGT+TGG + chr4_4:61924826-61924845 Msa0693100:intron 30.0%
CCTAACTTGATATGAAAACA+GGG - chr4_4:61924902-61924921 None:intergenic 30.0%
ACCTAACTTGATATGAAAAC+AGG - chr4_4:61924903-61924922 None:intergenic 30.0%
AGAAGTTAGCAATCAAATGT+TGG + chr4_4:61925065-61925084 Msa0693100:intron 30.0%
AATAGAATTCCACAATCACA+AGG + chr4_4:61925102-61925121 Msa0693100:CDS 30.0%
TCCAACAAGTTTATCTTTGT+CGG - chr4_4:61925379-61925398 None:intergenic 30.0%
TCAATCTTGATTGCTTCTTT+GGG - chr4_4:61925531-61925550 None:intergenic 30.0%
GATTGACAAAGATAAGGTAA+AGG + chr4_4:61925545-61925564 Msa0693100:CDS 30.0%
GACGATAAAGAAAGATGTAA+TGG + chr4_4:61925605-61925624 Msa0693100:CDS 30.0%
!! AAAGAAAGATGTAATGGATG+AGG + chr4_4:61925611-61925630 Msa0693100:CDS 30.0%
!!! CTTTCTCATTTTTTCTAACG+CGG - chr4_4:61925712-61925731 None:intergenic 30.0%
ATGGATTCAATGCAGAAAAA+GGG + chr4_4:61925916-61925935 Msa0693100:CDS 30.0%
! ACAATGATTTTTCCGAGTAA+GGG + chr4_4:61926045-61926064 Msa0693100:CDS 30.0%
TAATTGCACTACCAAAATTG+AGG - chr4_4:61926208-61926227 None:intergenic 30.0%
AATAGCTTATGCTTTCTTTG+GGG + chr4_4:61926227-61926246 Msa0693100:three_prime_UTR 30.0%
TTGCATTACTACCAAAATTG+AGG - chr4_4:61926292-61926311 None:intergenic 30.0%
! CTGAATCTTTACTGCATTTT+TGG - chr4_4:61926428-61926447 None:intergenic 30.0%
AAGGCTTTACACATATCTAA+GGG + chr4_4:61926477-61926496 Msa0693100:three_prime_UTR 30.0%
GAAAACAAATCGAAGGAACT+GGG - chr4_4:61919552-61919571 None:intergenic 35.0%
AGAAAACAAATCGAAGGAAC+TGG - chr4_4:61919553-61919572 None:intergenic 35.0%
! AAAACGAAAGAGGCGTAAAA+AGG - chr4_4:61919582-61919601 None:intergenic 35.0%
! GGGTTGATTAATTTCCCAAA+CGG - chr4_4:61919792-61919811 None:intergenic 35.0%
GTAAAACGAAGATTAGGGTT+TGG + chr4_4:61919903-61919922 Msa0693100:intron 35.0%
ACTAACCTGCATGTAAAAAC+AGG - chr4_4:61920210-61920229 None:intergenic 35.0%
!!! AAAGACCTGTTTTTACATGC+GGG + chr4_4:61920421-61920440 Msa0693100:intron 35.0%
GGTCATAAGAAAACCCATAT+AGG + chr4_4:61920471-61920490 Msa0693100:intron 35.0%
GAAAAAGTTGTAGGGAACAT+AGG - chr4_4:61920595-61920614 None:intergenic 35.0%
ACTGGACAGAAAAAGTTGTA+GGG - chr4_4:61920603-61920622 None:intergenic 35.0%
! GGTTTTGCGCAAAATTTGAA+AGG - chr4_4:61920887-61920906 None:intergenic 35.0%
GCATACATGTAATTGATGTG+CGG + chr4_4:61920924-61920943 Msa0693100:intron 35.0%
CATACATGTAATTGATGTGC+GGG + chr4_4:61920925-61920944 Msa0693100:intron 35.0%
ATACATGTAATTGATGTGCG+GGG + chr4_4:61920926-61920945 Msa0693100:intron 35.0%
CCGTACAAAATCAATAGCAA+AGG - chr4_4:61920986-61921005 None:intergenic 35.0%
GTTATAGCACTCTAAATTCC+CGG + chr4_4:61921019-61921038 Msa0693100:intron 35.0%
ATCAACAAGCAGAAAGATTC+TGG - chr4_4:61921083-61921102 None:intergenic 35.0%
! AGATAAGCAAGAAGAAGCAT+TGG + chr4_4:61921224-61921243 Msa0693100:CDS 35.0%
!! GATAAGCAAGAAGAAGCATT+GGG + chr4_4:61921225-61921244 Msa0693100:CDS 35.0%
CAAAATCGTATGTGTATGAG+AGG - chr4_4:61921506-61921525 None:intergenic 35.0%
!! CGCTTTAAGATTGCATAGTT+GGG - chr4_4:61921544-61921563 None:intergenic 35.0%
TGCAACTTACAAAAGATCAG+GGG - chr4_4:61921909-61921928 None:intergenic 35.0%
TTGAAGTTGAAATGCTGTGT+TGG + chr4_4:61922049-61922068 Msa0693100:intron 35.0%
ATCAAGACACACAAGTTCTA+GGG - chr4_4:61922206-61922225 None:intergenic 35.0%
GAAGCTCTTAAACTATGAGT+TGG + chr4_4:61922270-61922289 Msa0693100:intron 35.0%
AGCTCTTAAACTATGAGTTG+GGG + chr4_4:61922272-61922291 Msa0693100:intron 35.0%
TATGATCCAACAGCAAATCT+AGG - chr4_4:61922344-61922363 None:intergenic 35.0%
TCCCATATCAACTAGAGATA+TGG + chr4_4:61922417-61922436 Msa0693100:intron 35.0%
! CCCATATCTCTAGTTGATAT+GGG - chr4_4:61922421-61922440 None:intergenic 35.0%
CCCATATCAACTAGAGATAT+GGG + chr4_4:61922418-61922437 Msa0693100:intron 35.0%
! CACAAATTTCTGACAGCTTT+TGG - chr4_4:61922522-61922541 None:intergenic 35.0%
TATTCTTGCAAAGCTCAAGT+TGG + chr4_4:61922604-61922623 Msa0693100:intron 35.0%
!! GTCAAATTTGCACTTTTTGG+GGG + chr4_4:61922870-61922889 Msa0693100:intron 35.0%
AGAACACTTTGAGTAGAAGT+TGG - chr4_4:61922941-61922960 None:intergenic 35.0%
! TGCTACAGTTTGCATGTTTT+TGG + chr4_4:61923127-61923146 Msa0693100:CDS 35.0%
CTAGAAACTGACAAATTGGA+GGG - chr4_4:61923450-61923469 None:intergenic 35.0%
ATGCCTAGAAACTGACAAAT+TGG - chr4_4:61923454-61923473 None:intergenic 35.0%
AGGCATCACATCATCTATAT+TGG + chr4_4:61923468-61923487 Msa0693100:intron 35.0%
GAGCTACAAAAACACTGTAT+AGG - chr4_4:61923541-61923560 None:intergenic 35.0%
CATGAAACAGATTTCCATGA+AGG - chr4_4:61923725-61923744 None:intergenic 35.0%
! GGTTTTTGTAAGGATGAGTT+AGG - chr4_4:61923763-61923782 None:intergenic 35.0%
GAGAAGAGTTTATAAAGAGG+AGG - chr4_4:61923806-61923825 None:intergenic 35.0%
AGTTCTATATCTATCCGATG+TGG + chr4_4:61923829-61923848 Msa0693100:intron 35.0%
GTTCTATATCTATCCGATGT+GGG + chr4_4:61923830-61923849 Msa0693100:intron 35.0%
CTAACTAAATGTCGCAACTT+AGG + chr4_4:61923910-61923929 Msa0693100:intron 35.0%
CACAAAAATTTCGAATTCGG+TGG - chr4_4:61924080-61924099 None:intergenic 35.0%
TATAGCAGTTTGAGTGCAAT+GGG - chr4_4:61924216-61924235 None:intergenic 35.0%
ATATAGCAGTTTGAGTGCAA+TGG - chr4_4:61924217-61924236 None:intergenic 35.0%
GCACTCAAACTGCTATATAT+CGG + chr4_4:61924219-61924238 Msa0693100:intron 35.0%
ATTCAAGTCAAAAGCCAAAG+TGG - chr4_4:61924417-61924436 None:intergenic 35.0%
GCATGGAACTTTGTTAATGA+TGG + chr4_4:61924512-61924531 Msa0693100:CDS 35.0%
!!! TAGGTTTTTTGTTCACACAC+TGG + chr4_4:61924590-61924609 Msa0693100:intron 35.0%
! CCCTGTTTTCATATCAAGTT+AGG + chr4_4:61924899-61924918 Msa0693100:intron 35.0%
TTAAACAGGATGCTATCCTT+CGG + chr4_4:61924985-61925004 Msa0693100:intron 35.0%
TGACATTACTGATCACAAGA+TGG + chr4_4:61925314-61925333 Msa0693100:CDS 35.0%
CCAACAAGTTTATCTTTGTC+GGG - chr4_4:61925378-61925397 None:intergenic 35.0%
! AACAAGTCTAGCTTCAATGT+TGG + chr4_4:61925465-61925484 Msa0693100:CDS 35.0%
CTTCAATGTTGGTCAAAATC+TGG + chr4_4:61925476-61925495 Msa0693100:CDS 35.0%
GTCAATCTTGATTGCTTCTT+TGG - chr4_4:61925532-61925551 None:intergenic 35.0%
AAAAAAGGAGAAAGGAACGA+GGG + chr4_4:61925577-61925596 Msa0693100:CDS 35.0%
GTCTTTGTCAATCATCTTGT+TGG - chr4_4:61925679-61925698 None:intergenic 35.0%
CGCGTTAGAAAAAATGAGAA+AGG + chr4_4:61925710-61925729 Msa0693100:CDS 35.0%
GAAAAAATGAGAAAGGAACG+AGG + chr4_4:61925717-61925736 Msa0693100:CDS 35.0%
!! AAAGAAAGATGTAATGGACG+AGG + chr4_4:61925752-61925771 Msa0693100:CDS 35.0%
! GATGGATTCAATGCAGAAAA+AGG + chr4_4:61925915-61925934 Msa0693100:CDS 35.0%
TGGATTCAATGCAGAAAAAG+GGG + chr4_4:61925917-61925936 Msa0693100:CDS 35.0%
AACAATCGCAAGAGAAAGAA+GGG + chr4_4:61925969-61925988 Msa0693100:CDS 35.0%
! CACAATGATTTTTCCGAGTA+AGG + chr4_4:61926044-61926063 Msa0693100:CDS 35.0%
! CAATGATTTTTCCGAGTAAG+GGG + chr4_4:61926046-61926065 Msa0693100:exon 35.0%
! TGATAAGGAATTGATGACTC+TGG + chr4_4:61926136-61926155 Msa0693100:three_prime_UTR 35.0%
ATAGCTTATGCTTTCTTTGG+GGG + chr4_4:61926228-61926247 Msa0693100:three_prime_UTR 35.0%
AGAATTTCATGCTGTTGTCA+GGG + chr4_4:61926260-61926279 Msa0693100:three_prime_UTR 35.0%
AAGAAACACTAGCAGATTAC+TGG - chr4_4:61926367-61926386 None:intergenic 35.0%
CTCTCTCTCTATACTATTGT+TGG - chr4_4:61926456-61926475 None:intergenic 35.0%
AATAGTATAGAGAGAGAGCA+AGG + chr4_4:61926458-61926477 Msa0693100:three_prime_UTR 35.0%
CAAGGCTTTACACATATCTA+AGG + chr4_4:61926476-61926495 Msa0693100:three_prime_UTR 35.0%
ACCATTTACTACAGCTAAAG+TGG - chr4_4:61926516-61926535 None:intergenic 35.0%
ATTGCAAGTTTCGTCGTGTT+CGG - chr4_4:61919487-61919506 None:intergenic 40.0%
CATGGTCAATAGTTCCGATA+GGG - chr4_4:61919757-61919776 None:intergenic 40.0%
ACATGGTCAATAGTTCCGAT+AGG - chr4_4:61919758-61919777 None:intergenic 40.0%
! GAAAGACCGTTTTATGCACT+CGG + chr4_4:61920173-61920192 Msa0693100:intron 40.0%
! AAAGACCGTTTTATGCACTC+GGG + chr4_4:61920174-61920193 Msa0693100:intron 40.0%
GGTCTTGAGAAAACCTGTAT+AGG + chr4_4:61920252-61920271 Msa0693100:intron 40.0%
!!! TTTGTCATTTTCATCTGGGG+AGG + chr4_4:61920350-61920369 Msa0693100:intron 40.0%
ACTAACCCGCATGTAAAAAC+AGG - chr4_4:61920429-61920448 None:intergenic 40.0%
AGAATACCCATTTATGCACG+TGG + chr4_4:61920449-61920468 Msa0693100:intron 40.0%
GAATACCCATTTATGCACGT+GGG + chr4_4:61920450-61920469 Msa0693100:intron 40.0%
TATGACCCACGTGCATAAAT+GGG - chr4_4:61920458-61920477 None:intergenic 40.0%
TTATGACCCACGTGCATAAA+TGG - chr4_4:61920459-61920478 None:intergenic 40.0%
!! CAAAGGCATCATAACGCATA+GGG - chr4_4:61920561-61920580 None:intergenic 40.0%
GACTGGACAGAAAAAGTTGT+AGG - chr4_4:61920604-61920623 None:intergenic 40.0%
AAGGATGGAACAAACAAGGA+AGG - chr4_4:61920626-61920645 None:intergenic 40.0%
GAAGAAGGATGGAACAAACA+AGG - chr4_4:61920630-61920649 None:intergenic 40.0%
AACAAGCAGAAAGATTCTGG+AGG - chr4_4:61921080-61921099 None:intergenic 40.0%
AACAGTGCAACTAACCCATA+TGG + chr4_4:61921134-61921153 Msa0693100:exon 40.0%
AATGCTCCGTCAAGAAAAGA+TGG + chr4_4:61921282-61921301 Msa0693100:CDS 40.0%
!! GCGCTTTAAGATTGCATAGT+TGG - chr4_4:61921545-61921564 None:intergenic 40.0%
GCTGTTGCTATAGTTACTTG+AGG - chr4_4:61921785-61921804 None:intergenic 40.0%
TCATGCAAAGAATGACCGAA+GGG + chr4_4:61921841-61921860 Msa0693100:CDS 40.0%
AACTTACAAAAGATCAGGGG+AGG - chr4_4:61921906-61921925 None:intergenic 40.0%
!!! GATACATGGTGGATGGTTTT+TGG + chr4_4:61922074-61922093 Msa0693100:intron 40.0%
! TCAAGACACACAAGTTCTAG+GGG - chr4_4:61922205-61922224 None:intergenic 40.0%
CATCAAGACACACAAGTTCT+AGG - chr4_4:61922207-61922226 None:intergenic 40.0%
TGTGTCTTGATGTCTAGAGA+TGG + chr4_4:61922215-61922234 Msa0693100:intron 40.0%
!! GACTATCCTAGATTTGCTGT+TGG + chr4_4:61922335-61922354 Msa0693100:intron 40.0%
! GCCCATATCTCTAGTTGATA+TGG - chr4_4:61922422-61922441 None:intergenic 40.0%
TATGGGCAAAGTAGTCTTTG+AGG + chr4_4:61922435-61922454 Msa0693100:intron 40.0%
AGAAGAACAACAAATCTGGC+AGG - chr4_4:61922740-61922759 None:intergenic 40.0%
!!! ACAGTTTGCATGTTTTTGGC+TGG + chr4_4:61923131-61923150 Msa0693100:CDS 40.0%
!!! TTGCATGTTTTTGGCTGGAA+AGG + chr4_4:61923136-61923155 Msa0693100:CDS 40.0%
ATAACATCCTTAAGAGGACG+AGG - chr4_4:61923173-61923192 None:intergenic 40.0%
TGCACAGAGGATAAAACAGA+AGG + chr4_4:61923235-61923254 Msa0693100:CDS 40.0%
ATTCTATTCGCTTCAAGAGC+AGG + chr4_4:61923421-61923440 Msa0693100:intron 40.0%
CCTAGAAACTGACAAATTGG+AGG - chr4_4:61923451-61923470 None:intergenic 40.0%
CCTCCAATTTGTCAGTTTCT+AGG + chr4_4:61923448-61923467 Msa0693100:intron 40.0%
TTGTGCTCAAACATGGTAGA+TGG + chr4_4:61923498-61923517 Msa0693100:intron 40.0%
TGTGCTCAAACATGGTAGAT+GGG + chr4_4:61923499-61923518 Msa0693100:intron 40.0%
!!! TGAAGGCATTTTGCAGAATG+CGG - chr4_4:61923708-61923727 None:intergenic 40.0%
CATTCTGCAAAATGCCTTCA+TGG + chr4_4:61923708-61923727 Msa0693100:intron 40.0%
!! CTTACAAGCCGGTTTTTGTA+AGG - chr4_4:61923773-61923792 None:intergenic 40.0%
!! CTTACAAAAACCGGCTTGTA+AGG + chr4_4:61923771-61923790 Msa0693100:intron 40.0%
!! TCATTGTGTAGGCTTTGAGA+GGG - chr4_4:61923866-61923885 None:intergenic 40.0%
!! TTCATTGTGTAGGCTTTGAG+AGG - chr4_4:61923867-61923886 None:intergenic 40.0%
TCTCAAAGCCTACACAATGA+AGG + chr4_4:61923866-61923885 Msa0693100:intron 40.0%
TGGAAATTCCGCCTTAATTG+CGG - chr4_4:61923950-61923969 None:intergenic 40.0%
CAAGGATTCAAAAGCTGACA+GGG - chr4_4:61924253-61924272 None:intergenic 40.0%
ACAAGGATTCAAAAGCTGAC+AGG - chr4_4:61924254-61924273 None:intergenic 40.0%
AAAGAGCGGGGTTAAAAACA+AGG - chr4_4:61924271-61924290 None:intergenic 40.0%
TTTGTTCACACACTGGAAAG+TGG + chr4_4:61924597-61924616 Msa0693100:intron 40.0%
AAGCTTCACTTTCAGGAACT+TGG - chr4_4:61924698-61924717 None:intergenic 40.0%
ATGCAAATGAATTGAGGGGA+TGG - chr4_4:61924789-61924808 None:intergenic 40.0%
!!! CACAGACCCACTTTTTCATT+AGG + chr4_4:61924936-61924955 Msa0693100:intron 40.0%
AAAAACAGCAAGGACTCAGA+AGG - chr4_4:61925038-61925057 None:intergenic 40.0%
TCTGCAAGAGAAAAACAGCA+AGG - chr4_4:61925048-61925067 None:intergenic 40.0%
! TGGTTTTCGGTTCTTGAAAC+TGG - chr4_4:61925264-61925283 None:intergenic 40.0%
ACCGAAAACCAAAGCAATGA+TGG + chr4_4:61925273-61925292 Msa0693100:CDS 40.0%
!!! CCCATCATTGCTTTGGTTTT+CGG - chr4_4:61925277-61925296 None:intergenic 40.0%
CCGAAAACCAAAGCAATGAT+GGG + chr4_4:61925274-61925293 Msa0693100:CDS 40.0%
! AATGATGGGAGTGCAGAAAT+GGG + chr4_4:61925288-61925307 Msa0693100:CDS 40.0%
! TACTGATCACAAGATGGACT+CGG + chr4_4:61925320-61925339 Msa0693100:CDS 40.0%
! TTTGTCGGGTAACTTTTCTG+AGG - chr4_4:61925364-61925383 None:intergenic 40.0%
CCCGACAAAGATAAACTTGT+TGG + chr4_4:61925375-61925394 Msa0693100:CDS 40.0%
TAATTCTGTAGCCTCCTTTG+GGG - chr4_4:61925421-61925440 None:intergenic 40.0%
CTAATTCTGTAGCCTCCTTT+GGG - chr4_4:61925422-61925441 None:intergenic 40.0%
GAAAAAAGGAGAAAGGAACG+AGG + chr4_4:61925576-61925595 Msa0693100:CDS 40.0%
AAAAAGGAGAAAGGAACGAG+GGG + chr4_4:61925578-61925597 Msa0693100:CDS 40.0%
ATGAGGATGATCTCATTGAG+AGG + chr4_4:61925628-61925647 Msa0693100:CDS 40.0%
TGAGGATGATCTCATTGAGA+GGG + chr4_4:61925629-61925648 Msa0693100:CDS 40.0%
! AAGCCTGATGATGAAGATCA+TGG + chr4_4:61925864-61925883 Msa0693100:CDS 40.0%
TCACCATGATCTTCATCATC+AGG - chr4_4:61925870-61925889 None:intergenic 40.0%
! TGATGATGAAGATCATGGTG+AGG + chr4_4:61925869-61925888 Msa0693100:CDS 40.0%
GAACAATCGCAAGAGAAAGA+AGG + chr4_4:61925968-61925987 Msa0693100:CDS 40.0%
TCAAGACGTTTCTTCGTTTC+TGG - chr4_4:61926014-61926033 None:intergenic 40.0%
! ATTTTTCCGAGTAAGGGGAT+GGG + chr4_4:61926051-61926070 Msa0693100:exon 40.0%
TAGCTTATGCTTTCTTTGGG+GGG + chr4_4:61926229-61926248 Msa0693100:three_prime_UTR 40.0%
GAGAATTTCATGCTGTTGTC+AGG + chr4_4:61926259-61926278 Msa0693100:three_prime_UTR 40.0%
GAATTTCATGCTGTTGTCAG+GGG + chr4_4:61926261-61926280 Msa0693100:three_prime_UTR 40.0%
AATTTCATGCTGTTGTCAGG+GGG + chr4_4:61926262-61926281 Msa0693100:three_prime_UTR 40.0%
! GCCACTTTAGCTGTAGTAAA+TGG + chr4_4:61926512-61926531 Msa0693100:three_prime_UTR 40.0%
GCAATTGGAAGATGCAGCAA+AGG - chr4_4:61919465-61919484 None:intergenic 45.0%
GACGAAACTTGCAATTCACG+AGG + chr4_4:61919492-61919511 Msa0693100:five_prime_UTR 45.0%
AAACGGAGCAGAGAAGAACA+TGG - chr4_4:61919775-61919794 None:intergenic 45.0%
ATGTTCTTCTCTGCTCCGTT+TGG + chr4_4:61919774-61919793 Msa0693100:intron 45.0%
TGTTCTTCTCTGCTCCGTTT+GGG + chr4_4:61919775-61919794 Msa0693100:intron 45.0%
AGACGAAGTGTGTATGAGCA+TGG + chr4_4:61919986-61920005 Msa0693100:intron 45.0%
GCCCAATCACCACAGTAAAT+CGG + chr4_4:61920110-61920129 Msa0693100:intron 45.0%
! GCCGATTTACTGTGGTGATT+GGG - chr4_4:61920114-61920133 None:intergenic 45.0%
AGAAGACCCATTTATGCTCG+CGG + chr4_4:61920230-61920249 Msa0693100:intron 45.0%
TCTGACCTGCATGCAGAAAA+CGG - chr4_4:61920401-61920420 None:intergenic 45.0%
!! GCAAAGGCATCATAACGCAT+AGG - chr4_4:61920562-61920581 None:intergenic 45.0%
TGGAACAAACAAGGAAGGAC+TGG - chr4_4:61920621-61920640 None:intergenic 45.0%
! GGTTAGTTGCACTGTTGACT+GGG - chr4_4:61921130-61921149 None:intergenic 45.0%
! AGACACAAGTGCTGCCATAT+GGG - chr4_4:61921151-61921170 None:intergenic 45.0%
ATAGTTACTTGAGGCCTGCA+GGG - chr4_4:61921776-61921795 None:intergenic 45.0%
TATAGTTACTTGAGGCCTGC+AGG - chr4_4:61921777-61921796 None:intergenic 45.0%
CTCATGCAAAGAATGACCGA+AGG + chr4_4:61921840-61921859 Msa0693100:CDS 45.0%
! TGAAAGCATAACCCACCCTT+CGG - chr4_4:61921859-61921878 None:intergenic 45.0%
! ATGCTGTGTTGGCAGATACA+TGG + chr4_4:61922060-61922079 Msa0693100:intron 45.0%
TTCAACTGCAGATGCCTGTT+TGG + chr4_4:61922110-61922129 Msa0693100:intron 45.0%
! CTGTCCATGCTCTAGATGTA+CGG + chr4_4:61922367-61922386 Msa0693100:intron 45.0%
! AAGACCGTACATCTAGAGCA+TGG - chr4_4:61922374-61922393 None:intergenic 45.0%
TCTAGATGTACGGTCTTGAG+TGG + chr4_4:61922377-61922396 Msa0693100:intron 45.0%
CTAGATGTACGGTCTTGAGT+GGG + chr4_4:61922378-61922397 Msa0693100:intron 45.0%
!! CAAAGTAGTCTTTGAGGCCT+GGG + chr4_4:61922441-61922460 Msa0693100:intron 45.0%
!! AAAAACCGGCTTGTAAGGTG+AGG + chr4_4:61923776-61923795 Msa0693100:intron 45.0%
! AGCCTACACAATGAAGGTGT+TGG + chr4_4:61923872-61923891 Msa0693100:intron 45.0%
CTCCAACACCTTCATTGTGT+AGG - chr4_4:61923877-61923896 None:intergenic 45.0%
!! CTACACAATGAAGGTGTTGG+AGG + chr4_4:61923875-61923894 Msa0693100:intron 45.0%
ATGTCGCAACTTAGGTGACT+AGG + chr4_4:61923918-61923937 Msa0693100:intron 45.0%
TGTCGCAACTTAGGTGACTA+GGG + chr4_4:61923919-61923938 Msa0693100:intron 45.0%
CAAGGGGCTTATATGGATGT+TGG - chr4_4:61924442-61924461 None:intergenic 45.0%
TTCTTTATGGCCTCGACAAG+GGG - chr4_4:61924458-61924477 None:intergenic 45.0%
CTTCTTTATGGCCTCGACAA+GGG - chr4_4:61924459-61924478 None:intergenic 45.0%
ACTTCTTTATGGCCTCGACA+AGG - chr4_4:61924460-61924479 None:intergenic 45.0%
GTTCCATGCAACTTGTGCAA+GGG - chr4_4:61924501-61924520 None:intergenic 45.0%
AGTTCCATGCAACTTGTGCA+AGG - chr4_4:61924502-61924521 None:intergenic 45.0%
GAACTTGGCAGCAAGGAAAA+TGG - chr4_4:61924683-61924702 None:intergenic 45.0%
AAAGTGAAGCTTCCGTCAGA+CGG + chr4_4:61924706-61924725 Msa0693100:CDS 45.0%
CATTCATAGAGAGACACCGA+AGG - chr4_4:61925004-61925023 None:intergenic 45.0%
GCTTCACTTCCTTGTGATTG+TGG - chr4_4:61925114-61925133 None:intergenic 45.0%
TCACAAGGAAGTGAAGCAGA+AGG + chr4_4:61925117-61925136 Msa0693100:CDS 45.0%
CACAAGGAAGTGAAGCAGAA+GGG + chr4_4:61925118-61925137 Msa0693100:CDS 45.0%
ACAAGGAAGTGAAGCAGAAG+GGG + chr4_4:61925119-61925138 Msa0693100:CDS 45.0%
!! TTTCCACAGATGAGCACTGA+GGG - chr4_4:61925230-61925249 None:intergenic 45.0%
!! TTTTCCACAGATGAGCACTG+AGG - chr4_4:61925231-61925250 None:intergenic 45.0%
! CAATGATGGGAGTGCAGAAA+TGG + chr4_4:61925287-61925306 Msa0693100:CDS 45.0%
!! AGAGAAACTTGTTGCCCCAA+AGG + chr4_4:61925404-61925423 Msa0693100:CDS 45.0%
CCTAATTCTGTAGCCTCCTT+TGG - chr4_4:61925423-61925442 None:intergenic 45.0%
CCAAAGGAGGCTACAGAATT+AGG + chr4_4:61925420-61925439 Msa0693100:CDS 45.0%
AGGAGGCTACAGAATTAGGA+AGG + chr4_4:61925424-61925443 Msa0693100:CDS 45.0%
! TTGGTCAAAATCTGGAGCGT+CGG + chr4_4:61925484-61925503 Msa0693100:CDS 45.0%
ATTGAGAGGGAGCTTGAAGA+TGG + chr4_4:61925642-61925661 Msa0693100:CDS 45.0%
ACGAGGATGATCTCATTGAG+AGG + chr4_4:61925769-61925788 Msa0693100:CDS 45.0%
CGAGGATGATCTCATTGAGA+GGG + chr4_4:61925770-61925789 Msa0693100:CDS 45.0%
ATTGAGAGGGAGCTTGAAGA+TGG + chr4_4:61925642-61925661 Msa0693100:CDS 45.0%
GCTTGAAGATGGAGTAGAGT+TGG + chr4_4:61925794-61925813 Msa0693100:CDS 45.0%
!! TTCGTTTCTGGTTGACTTGC+TGG - chr4_4:61926002-61926021 None:intergenic 45.0%
! GATTTTTCCGAGTAAGGGGA+TGG + chr4_4:61926050-61926069 Msa0693100:exon 45.0%
!!! TAAAATAAAAAACAAATTTT+GGG - chr4_4:61919812-61919831 None:intergenic 5.0%
!!! ATAAAATAAAAAACAAATTT+TGG - chr4_4:61919813-61919832 None:intergenic 5.0%
!!! CTATTTTTTAAATAATTAAT+AGG - chr4_4:61920527-61920546 None:intergenic 5.0%
GTTTCGTCGTGTTCGGCAAT+TGG - chr4_4:61919480-61919499 None:intergenic 50.0%
CTTGCAATTCACGAGGCTTC+AGG + chr4_4:61919499-61919518 Msa0693100:five_prime_UTR 50.0%
GGCTTCTCTTCTCTACCTTC+TGG + chr4_4:61919520-61919539 Msa0693100:five_prime_UTR 50.0%
GGAACTGGGAACATACCAGA+AGG - chr4_4:61919538-61919557 None:intergenic 50.0%
CGAAGTGTGTATGAGCATGG+TGG + chr4_4:61919989-61920008 Msa0693100:intron 50.0%
! GGCCGATTTACTGTGGTGAT+TGG - chr4_4:61920115-61920134 None:intergenic 50.0%
TAAATCGGCCGCAAAGGTGA+TGG + chr4_4:61920125-61920144 Msa0693100:intron 50.0%
CCTGACCCGAGTGCATAAAA+CGG - chr4_4:61920182-61920201 None:intergenic 50.0%
GAAGACCCATTTATGCTCGC+GGG + chr4_4:61920231-61920250 Msa0693100:intron 50.0%
CAAGACCCGCGAGCATAAAT+GGG - chr4_4:61920239-61920258 None:intergenic 50.0%
TCAAGACCCGCGAGCATAAA+TGG - chr4_4:61920240-61920259 None:intergenic 50.0%
! AGAACCCGTTTTCTGCATGC+AGG + chr4_4:61920393-61920412 Msa0693100:intron 50.0%
CTGACCTGCATGCAGAAAAC+GGG - chr4_4:61920400-61920419 None:intergenic 50.0%
GGCATCATAACGCATAGGGA+AGG - chr4_4:61920557-61920576 None:intergenic 50.0%
GTAGGGAACATAGGGTTGCA+GGG - chr4_4:61920586-61920605 None:intergenic 50.0%
TGTAGGGAACATAGGGTTGC+AGG - chr4_4:61920587-61920606 None:intergenic 50.0%
CGAACGAGAGAGAAGAAGGA+TGG - chr4_4:61920641-61920660 None:intergenic 50.0%
GAGACGAACGAGAGAGAAGA+AGG - chr4_4:61920645-61920664 None:intergenic 50.0%
CTCTCTCGTTCGTCTCTGTT+CGG + chr4_4:61920649-61920668 Msa0693100:intron 50.0%
!! GGGTTAGTTGCACTGTTGAC+TGG - chr4_4:61921131-61921150 None:intergenic 50.0%
! CAGACACAAGTGCTGCCATA+TGG - chr4_4:61921152-61921171 None:intergenic 50.0%
CATATGGCAGCACTTGTGTC+TGG + chr4_4:61921150-61921169 Msa0693100:exon 50.0%
TCTGGAGAGTTGCCACATCA+TGG + chr4_4:61921168-61921187 Msa0693100:CDS 50.0%
! CCACATCATGGAGCATCTGA+CGG + chr4_4:61921180-61921199 Msa0693100:CDS 50.0%
!! AAGAAGAAGCATTGGGTCGC+TGG + chr4_4:61921232-61921251 Msa0693100:CDS 50.0%
ATTGTAGCTTCATCCCCTGC+AGG + chr4_4:61921759-61921778 Msa0693100:intron 50.0%
TAGTTACTTGAGGCCTGCAG+GGG - chr4_4:61921775-61921794 None:intergenic 50.0%
TGCAAAGAATGACCGAAGGG+TGG + chr4_4:61921844-61921863 Msa0693100:intron 50.0%
GCAAAGAATGACCGAAGGGT+GGG + chr4_4:61921845-61921864 Msa0693100:intron 50.0%
! CTGTGTTGGCAGATACATGG+TGG + chr4_4:61922063-61922082 Msa0693100:intron 50.0%
! GTTGGCAGATACATGGTGGA+TGG + chr4_4:61922067-61922086 Msa0693100:intron 50.0%
!! GCAAAGTAGTCTTTGAGGCC+TGG + chr4_4:61922440-61922459 Msa0693100:intron 50.0%
TGTGAGTGTGAAGATAGCCC+AGG - chr4_4:61922461-61922480 None:intergenic 50.0%
!!! TCACACCTCGAGCTAGCTTT+TGG + chr4_4:61922476-61922495 Msa0693100:intron 50.0%
!!! CACACCTCGAGCTAGCTTTT+GGG + chr4_4:61922477-61922496 Msa0693100:intron 50.0%
TCAACCCAAAAGCTAGCTCG+AGG - chr4_4:61922484-61922503 None:intergenic 50.0%
AGAGACTCCTCGTCCTCTTA+AGG + chr4_4:61923163-61923182 Msa0693100:CDS 50.0%
TTATCCTCTGTGCAGCAGCA+GGG - chr4_4:61923229-61923248 None:intergenic 50.0%
TTTATCCTCTGTGCAGCAGC+AGG - chr4_4:61923230-61923249 None:intergenic 50.0%
! GGGTGGATTTAGTCCCACAT+CGG - chr4_4:61923846-61923865 None:intergenic 50.0%
!! TTGTGTAGGCTTTGAGAGGG+TGG - chr4_4:61923863-61923882 None:intergenic 50.0%
!! ACAATGAAGGTGTTGGAGGC+TGG + chr4_4:61923879-61923898 Msa0693100:intron 50.0%
GTCGCAACTTAGGTGACTAG+GGG + chr4_4:61923920-61923939 Msa0693100:intron 50.0%
! GAGGGTTGTACTTGCCACTT+TGG + chr4_4:61924400-61924419 Msa0693100:CDS 50.0%
TCCATATAAGCCCCTTGTCG+AGG + chr4_4:61924445-61924464 Msa0693100:CDS 50.0%
CACACTGGAAAGTGGCTTTC+AGG + chr4_4:61924605-61924624 Msa0693100:intron 50.0%
AAGCCACATCATATTGCGGC+AGG + chr4_4:61924655-61924674 Msa0693100:CDS 50.0%
CTTTCAGGAACTTGGCAGCA+AGG - chr4_4:61924690-61924709 None:intergenic 50.0%
CTGACGGAAGCTTCACTTTC+AGG - chr4_4:61924705-61924724 None:intergenic 50.0%
CTACTGTCACATGTCTCGAC+TGG + chr4_4:61924871-61924890 Msa0693100:intron 50.0%
!! TTCCACAGATGAGCACTGAG+GGG - chr4_4:61925229-61925248 None:intergenic 50.0%
CTGCACTCCCATCATTGCTT+TGG - chr4_4:61925284-61925303 None:intergenic 50.0%
! ACAAGATGGACTCGGAAACC+AGG + chr4_4:61925328-61925347 Msa0693100:CDS 50.0%
! CAAGATGGACTCGGAAACCA+GGG + chr4_4:61925329-61925348 Msa0693100:CDS 50.0%
!! TTCTGAGGTCTGAGAATCCC+TGG - chr4_4:61925349-61925368 None:intergenic 50.0%
!! GAAACTTGTTGCCCCAAAGG+AGG + chr4_4:61925407-61925426 Msa0693100:CDS 50.0%
! TGGTCAAAATCTGGAGCGTC+GGG + chr4_4:61925485-61925504 Msa0693100:CDS 50.0%
CTTTGGGTGACTGACCAAGT+GGG - chr4_4:61925515-61925534 None:intergenic 50.0%
TCTTTGGGTGACTGACCAAG+TGG - chr4_4:61925516-61925535 None:intergenic 50.0%
AGATCATGGTGAGGACCTTG+AGG + chr4_4:61925878-61925897 Msa0693100:CDS 50.0%
ATCCTTCCCATCCCCTTACT+CGG - chr4_4:61926060-61926079 None:intergenic 50.0%
! GGAACGGGATGCCTCAATTT+TGG + chr4_4:61926194-61926213 Msa0693100:three_prime_UTR 50.0%
GGAAGATGCAGCAAAGGTCG+AGG - chr4_4:61919459-61919478 None:intergenic 55.0%
! CCTTTGCGGCCGATTTACTG+TGG - chr4_4:61920122-61920141 None:intergenic 55.0%
CCACAGTAAATCGGCCGCAA+AGG + chr4_4:61920119-61920138 Msa0693100:intron 55.0%
! CCGTTTTATGCACTCGGGTC+AGG + chr4_4:61920179-61920198 Msa0693100:intron 55.0%
CATAGGGTTGCAGGGAGCAA+AGG - chr4_4:61920578-61920597 None:intergenic 55.0%
CCGTCAGATGCTCCATGATG+TGG - chr4_4:61921183-61921202 None:intergenic 55.0%
GCACTCCTCACCTTACAAGC+CGG - chr4_4:61923784-61923803 None:intergenic 55.0%
! GGTGTTGGAGGCTGGAATGA+AGG + chr4_4:61923887-61923906 Msa0693100:intron 55.0%
CTAGGGGCGAACCGCAATTA+AGG + chr4_4:61923936-61923955 Msa0693100:intron 55.0%
GCCTCGACAAGGGGCTTATA+TGG - chr4_4:61924449-61924468 None:intergenic 55.0%
ACGCCCTTGCACAAGTTGCA+TGG + chr4_4:61924495-61924514 Msa0693100:CDS 55.0%
GGAAAGTGGCTTTCAGGCTG+AGG + chr4_4:61924611-61924630 Msa0693100:intron 55.0%
GCACCTGCCGCAATATGATG+TGG - chr4_4:61924661-61924680 None:intergenic 55.0%
CAGACCTTCTCACCGTCTGA+CGG - chr4_4:61924721-61924740 None:intergenic 55.0%
TGATGTCACCCCACGCCAAT+TGG + chr4_4:61924753-61924772 Msa0693100:CDS 55.0%
ACCAACCCTCCAATTGGCGT+GGG - chr4_4:61924765-61924784 None:intergenic 55.0%
GATGGCACCAACCCTCCAAT+TGG - chr4_4:61924771-61924790 None:intergenic 55.0%
TCCTGCGATGAGTGAAGAGC+AGG + chr4_4:61925176-61925195 Msa0693100:CDS 55.0%
!! TCCACAGATGAGCACTGAGG+GGG - chr4_4:61925228-61925247 None:intergenic 55.0%
!! CAAAATCTGGAGCGTCGGGA+AGG + chr4_4:61925489-61925508 Msa0693100:CDS 55.0%
TCATGGTGAGGACCTTGAGG+AGG + chr4_4:61925881-61925900 Msa0693100:CDS 55.0%
GACCTTGAGGAGGCTAGAGA+CGG + chr4_4:61925891-61925910 Msa0693100:CDS 55.0%
ACCTTGAGGAGGCTAGAGAC+GGG + chr4_4:61925892-61925911 Msa0693100:CDS 55.0%
TTCCGAGTAAGGGGATGGGA+AGG + chr4_4:61926055-61926074 Msa0693100:exon 55.0%
!! CAGGGGGTGTGCCTCAATTT+TGG + chr4_4:61926278-61926297 Msa0693100:three_prime_UTR 55.0%
CGCGGCGCACATTAGGGTTT+GGG + chr4_4:61920151-61920170 Msa0693100:intron 60.0%
! ATCTGGGGAGGCGCACACTA+GGG + chr4_4:61920362-61920381 Msa0693100:intron 60.0%
! GGAGGCGCACACTAGGGTTT+GGG + chr4_4:61920368-61920387 Msa0693100:intron 60.0%
AAGACCCTGCTGCTGCACAG+AGG + chr4_4:61923222-61923241 Msa0693100:CDS 60.0%
GGGGCGAACCGCAATTAAGG+CGG + chr4_4:61923939-61923958 Msa0693100:intron 60.0%
GCTTCCGTCAGACGGTGAGA+AGG + chr4_4:61924714-61924733 Msa0693100:CDS 60.0%
CGTCAGACGGTGAGAAGGTC+TGG + chr4_4:61924719-61924738 Msa0693100:CDS 60.0%
CAGACGGTGAGAAGGTCTGG+TGG + chr4_4:61924722-61924741 Msa0693100:CDS 60.0%
TGTCACCCCACGCCAATTGG+AGG + chr4_4:61924756-61924775 Msa0693100:CDS 60.0%
GTCACCCCACGCCAATTGGA+GGG + chr4_4:61924757-61924776 Msa0693100:CDS 60.0%
CCAACCCTCCAATTGGCGTG+GGG - chr4_4:61924764-61924783 None:intergenic 60.0%
CACCAACCCTCCAATTGGCG+TGG - chr4_4:61924766-61924785 None:intergenic 60.0%
AAGCAGAAGGGGCTGCTGCA+GGG + chr4_4:61925130-61925149 Msa0693100:CDS 60.0%
GCCTGCTCTTCACTCATCGC+AGG - chr4_4:61925180-61925199 None:intergenic 60.0%
ACCCCCTCAGTGCTCATCTG+TGG + chr4_4:61925224-61925243 Msa0693100:CDS 60.0%
CCTTGAGGAGGCTAGAGACG+GGG + chr4_4:61925893-61925912 Msa0693100:CDS 60.0%
CCGCGCAGCCATCACCTTTG+CGG - chr4_4:61920136-61920155 None:intergenic 65.0%
! CCGCAAAGGTGATGGCTGCG+CGG + chr4_4:61920133-61920152 Msa0693100:intron 65.0%
ATGGCTGCGCGGCGCACATT+AGG + chr4_4:61920144-61920163 Msa0693100:intron 65.0%
TGGCTGCGCGGCGCACATTA+GGG + chr4_4:61920145-61920164 Msa0693100:intron 65.0%
GCGCGGCGCACATTAGGGTT+TGG + chr4_4:61920150-61920169 Msa0693100:intron 65.0%
! CATCTGGGGAGGCGCACACT+AGG + chr4_4:61920361-61920380 Msa0693100:intron 65.0%
! GGGAGGCGCACACTAGGGTT+TGG + chr4_4:61920367-61920386 Msa0693100:intron 65.0%
CGGTGAGAAGGTCTGGTGGC+AGG + chr4_4:61924726-61924745 Msa0693100:CDS 65.0%
CCCCACGCCAATTGGAGGGT+TGG + chr4_4:61924761-61924780 Msa0693100:intron 65.0%
GAAGCAGAAGGGGCTGCTGC+AGG + chr4_4:61925129-61925148 Msa0693100:CDS 65.0%
AGCAGAAGGGGCTGCTGCAG+GGG + chr4_4:61925131-61925150 Msa0693100:CDS 65.0%
GGGAGCGAGAGCTGCTGCAA+GGG + chr4_4:61925152-61925171 Msa0693100:CDS 65.0%
GGAGCGAGAGCTGCTGCAAG+GGG + chr4_4:61925153-61925172 Msa0693100:CDS 65.0%
CCCCGTCTCTAGCCTCCTCA+AGG - chr4_4:61925896-61925915 None:intergenic 65.0%
GAGGAGGCTAGAGACGGGGA+TGG + chr4_4:61925897-61925916 Msa0693100:CDS 65.0%
GCAGAAGGGGCTGCTGCAGG+GGG + chr4_4:61925132-61925151 Msa0693100:CDS 70.0%
GGGGAGCGAGAGCTGCTGCA+AGG + chr4_4:61925151-61925170 Msa0693100:CDS 70.0%
!! GAGCGTCGGGAAGGCCCACT+TGG + chr4_4:61925498-61925517 Msa0693100:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 61919373 61926540 61919373 ID=Msa0693100;Name=Msa0693100
chr4_4 mRNA 61919373 61926540 61919373 ID=Msa0693100-mRNA-1;Parent=Msa0693100;Name=Msa0693100-mRNA-1;_AED=0.05;_eAED=0.05;_QI=238|1|1|1|0.83|0.71|7|476|590
chr4_4 exon 61919373 61919541 61919373 ID=Msa0693100-mRNA-1:exon:17231;Parent=Msa0693100-mRNA-1
chr4_4 exon 61921084 61921382 61921084 ID=Msa0693100-mRNA-1:exon:17232;Parent=Msa0693100-mRNA-1
chr4_4 exon 61921781 61921862 61921781 ID=Msa0693100-mRNA-1:exon:17233;Parent=Msa0693100-mRNA-1
chr4_4 exon 61923122 61923256 61923122 ID=Msa0693100-mRNA-1:exon:17234;Parent=Msa0693100-mRNA-1
chr4_4 exon 61924359 61924534 61924359 ID=Msa0693100-mRNA-1:exon:17235;Parent=Msa0693100-mRNA-1
chr4_4 exon 61924627 61924778 61924627 ID=Msa0693100-mRNA-1:exon:17236;Parent=Msa0693100-mRNA-1
chr4_4 exon 61925067 61926540 61925067 ID=Msa0693100-mRNA-1:exon:17237;Parent=Msa0693100-mRNA-1
chr4_4 five_prime_UTR 61919373 61919541 61919373 ID=Msa0693100-mRNA-1:five_prime_utr;Parent=Msa0693100-mRNA-1
chr4_4 five_prime_UTR 61921084 61921152 61921084 ID=Msa0693100-mRNA-1:five_prime_utr;Parent=Msa0693100-mRNA-1
chr4_4 CDS 61921153 61921382 61921153 ID=Msa0693100-mRNA-1:cds;Parent=Msa0693100-mRNA-1
chr4_4 CDS 61921781 61921862 61921781 ID=Msa0693100-mRNA-1:cds;Parent=Msa0693100-mRNA-1
chr4_4 CDS 61923122 61923256 61923122 ID=Msa0693100-mRNA-1:cds;Parent=Msa0693100-mRNA-1
chr4_4 CDS 61924359 61924534 61924359 ID=Msa0693100-mRNA-1:cds;Parent=Msa0693100-mRNA-1
chr4_4 CDS 61924627 61924778 61924627 ID=Msa0693100-mRNA-1:cds;Parent=Msa0693100-mRNA-1
chr4_4 CDS 61925067 61926064 61925067 ID=Msa0693100-mRNA-1:cds;Parent=Msa0693100-mRNA-1
chr4_4 three_prime_UTR 61926065 61926540 61926065 ID=Msa0693100-mRNA-1:three_prime_utr;Parent=Msa0693100-mRNA-1
Gene Sequence

>Msa0693100

ATGGCAGCACTTGTGTCTGGAGAGTTGCCACATCATGGAGCATCTGACGGAAGCTCTTGTAGAAGTTCTCAAGATAAGCAAGAAGAAGCATTGGGTCGCTGGTATATGTCTAGAAAAGAAATAGAAGAAAATGCTCCGTCAAGAAAAGATGGAATTGACTTGAAGAAAGAGACATATCTGCGCAAGTCATACTGTACATTCTTACAAGATTTAGGCATGCGACTTAAAGTGCCTCAAGTAACTATAGCAACAGCCATAATATTTTGTCATCGATTCTTTCTTCGACAATCTCATGCAAAGAATGACCGAAGGACAATTGCTACAGTTTGCATGTTTTTGGCTGGAAAGGTTGAAGAGACTCCTCGTCCTCTTAAGGATGTTATTCTCATATCTTATGAGATGATTCACAAGAAAGACCCTGCTGCTGCACAGAGGATAAAACAGAAGGAAGTATATGAGCAGCAGAAAGAATTAATTTTACTTGGAGAGAGGGTTGTACTTGCCACTTTGGCTTTTGACTTGAATGTCCAACATCCATATAAGCCCCTTGTCGAGGCCATAAAGAAGTTCAATGTTGCTAAGAACGCCCTTGCACAAGTTGCATGGAACTTTGTTAATGATGGGCTGAGGACATCACTCTGCCTACAATTTAAGCCACATCATATTGCGGCAGGTGCCATTTTCCTTGCTGCCAAGTTCCTGAAAGTGAAGCTTCCGTCAGACGGTGAGAAGGTCTGGTGGCAGGAGTTTGATGTCACCCCACGCCAATTGGAGGAAGTTAGCAATCAAATGTTGGAACTTTATGAGCAGAATAGAATTCCACAATCACAAGGAAGTGAAGCAGAAGGGGCTGCTGCAGGGGGAGCGAGAGCTGCTGCAAGGGGTCCTGCGATGAGTGAAGAGCAGGCTTCAAAACAAATTTCATCTCATTCACCCCCTCAGTGCTCATCTGTGGAAAATAATGCAGTACCAGTTTCAAGAACCGAAAACCAAAGCAATGATGGGAGTGCAGAAATGGGAAGTGACATTACTGATCACAAGATGGACTCGGAAACCAGGGATTCTCAGACCTCAGAAAAGTTACCCGACAAAGATAAACTTGTTGGAGATCAAGAGAAACTTGTTGCCCCAAAGGAGGCTACAGAATTAGGAAGGAGTGATGATACATCATTAAACAAGTCTAGCTTCAATGTTGGTCAAAATCTGGAGCGTCGGGAAGGCCCACTTGGTCAGTCACCCAAAGAAGCAATCAAGATTGACAAAGATAAGGTAAAGGCCATATTAGAAAAAAGGAGAAAGGAACGAGGGGAAATGACGATAAAGAAAGATGTAATGGATGAGGATGATCTCATTGAGAGGGAGCTTGAAGATGGAGTTGAAATGACCAACAAGATGATTGACAAAGACAAAGTAAAGACCGCGTTAGAAAAAATGAGAAAGGAACGAGGTGAAATGACATTAAAGAAAGATGTAATGGACGAGGATGATCTCATTGAGAGGGAGCTTGAAGATGGAGTAGAGTTGGCAGTTGAGAATGAGAAAAATAAGCAACAGAGAAGACAGAGCTTGTCTAAGCCTGATGATGAAGATCATGGTGAGGACCTTGAGGAGGCTAGAGACGGGGATGGATTCAATGCAGAAAAAGGGGATATGATAGATGATGCTTCATCTTTGTTGAACAATCGCAAGAGAAAGAAGGGTAGCTCTCCAGCAAGTCAACCAGAAACGAAGAAACGTCTTGATTCCAATTATCACAATGATTTTTCCGAGTAA
Protein sequence

>Msa0693100

MAALVSGELPHHGASDGSSCRSSQDKQEEALGRWYMSRKEIEENAPSRKDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILISYEMIHKKDPAAAQRIKQKEVYEQQKELILLGERVVLATLAFDLNVQHPYKPLVEAIKKFNVAKNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRIPQSQGSEAEGAAAGGARAAARGPAMSEEQASKQISSHSPPQCSSVENNAVPVSRTENQSNDGSAEMGSDITDHKMDSETRDSQTSEKLPDKDKLVGDQEKLVAPKEATELGRSDDTSLNKSSFNVGQNLERREGPLGQSPKEAIKIDKDKVKAILEKRRKERGEMTIKKDVMDEDDLIERELEDGVEMTNKMIDKDKVKTALEKMRKERGEMTLKKDVMDEDDLIERELEDGVELAVENEKNKQQRRQSLSKPDDEDHGEDLEEARDGDGFNAEKGDMIDDASSLLNNRKRKKGSSPASQPETKKRLDSNYHNDFSE*