AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1220940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1220940 MtrunA17_Chr4g0070881 93.315 1107 31 4 1 1107 231 1294 0.0 2087
Msa1220940 MtrunA17_Chr2g0299971 64.490 1118 310 20 1 1107 231 1272 0.0 1309
Msa1220940 MtrunA17_Chr4g0026411 28.363 1167 665 37 7 1107 175 1236 4.07e-85 301
Msa1220940 MtrunA17_Chr1g0210751 28.115 939 462 34 225 1101 367 1154 3.37e-54 206
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1220940 AT2G19390.1 45.527 1129 458 34 1 1107 218 1211 0.0 796
Msa1220940 AT2G19390.2 45.527 1129 458 34 1 1107 218 1211 0.0 796
Msa1220940 AT4G29790.1 46.435 1122 457 36 1 1107 219 1211 0.0 776
Msa1220940 AT5G22450.3 26.643 1141 575 50 30 1101 203 1150 9.07e-42 167
Msa1220940 AT5G22450.1 26.643 1141 575 50 30 1101 203 1150 9.07e-42 167
Msa1220940 AT5G22450.2 26.643 1141 575 50 30 1101 203 1150 9.07e-42 167

Find 307 sgRNAs with CRISPR-Local

Find 531 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGATTGATATTCCTAATTT+TGG 0.048782 8_1:-84340757 Msa1220940:CDS
ATCACCAATTTCTCAGAATT+TGG 0.102188 8_1:-84338671 Msa1220940:CDS
TCCTCTTCTTGCACCATTTC+AGG 0.145762 8_1:+84340407 None:intergenic
TATTATCTTGGCCGTTTCTA+TGG 0.153658 8_1:+84344051 None:intergenic
ACAAGATCATGACGACTTTA+TGG 0.158734 8_1:-84338050 Msa1220940:CDS
ACTCTGAATTACACCATTAT+TGG 0.167803 8_1:+84344747 None:intergenic
AATAATGGTTATGGAATTAT+TGG 0.182048 8_1:-84340805 Msa1220940:CDS
CAGCATTCTGTTTCTGTAAA+TGG 0.184712 8_1:-84338313 Msa1220940:CDS
CTGCACTGGCATTTGTTAAA+TGG 0.200481 8_1:-84339077 Msa1220940:CDS
CCTCAGCAAATTAGATTAAA+AGG 0.206334 8_1:-84343330 Msa1220940:CDS
CTTGGATTCAACCCAAAATT+AGG 0.210889 8_1:+84340745 None:intergenic
ACATTGAATAAACCTGTTAA+TGG 0.211820 8_1:-84344625 Msa1220940:CDS
GGTTCCATCTGCTTCCAAAA+TGG 0.236319 8_1:+84342547 None:intergenic
TACTTTGTTTCCTTTGTTAT+TGG 0.242515 8_1:+84337944 None:intergenic
AGCTTTGGCAACTCAATAAA+TGG 0.245736 8_1:-84340724 Msa1220940:CDS
AGAAACAAGCTTACTCTTTC+TGG 0.249291 8_1:+84343167 None:intergenic
TTATCCAAATTCTGAGAAAT+TGG 0.253548 8_1:+84338667 None:intergenic
CCAGTGGAAATGAAGATTTC+TGG 0.257550 8_1:-84338588 Msa1220940:CDS
AGTGCAGCAGCAGATTATTT+TGG 0.260427 8_1:-84342823 Msa1220940:intron
ACTCCTTCTCCAGCCCATTT+TGG 0.263999 8_1:-84342561 Msa1220940:CDS
GGCTAATTCTGTCTACAATT+AGG 0.264046 8_1:-84337884 Msa1220940:three_prime_UTR
ATTAGGTTATATAGATTCTT+TGG 0.269160 8_1:-84337867 Msa1220940:three_prime_UTR
GCATTCCCTGTTTAGTTTCC+TGG 0.270170 8_1:+84344599 None:intergenic
GCTTTCAGATCTATCTCTTC+TGG 0.271173 8_1:+84343225 None:intergenic
AGAAAGAGTAAGCTTGTTTC+TGG 0.278054 8_1:-84343165 Msa1220940:CDS
GAAACCATTGTTAATAGATA+TGG 0.281103 8_1:-84341102 Msa1220940:CDS
ACAGAAGGCAATGCCGGTTT+TGG 0.292405 8_1:+84338265 None:intergenic
AGATGGACACGGGGAGTTAT+TGG 0.299136 8_1:-84342700 Msa1220940:CDS
TCTTCTCATTCTGCTAATAA+TGG 0.307707 8_1:-84340820 Msa1220940:CDS
TCTTGCCTGTATCTTCAAAT+TGG 0.314315 8_1:+84339037 None:intergenic
CATTCTGCTAATAATGGTTA+TGG 0.321303 8_1:-84340814 Msa1220940:CDS
CTTCCCAGCATAGCATTGTT+AGG 0.322216 8_1:-84338969 Msa1220940:CDS
TGAGTTTGGCTTGGGTGGAT+TGG 0.336747 8_1:-84338194 Msa1220940:CDS
CTAAAATGAATACTGCTATT+CGG 0.339196 8_1:-84343686 Msa1220940:CDS
ATGAAGATTTCTGGTCAAAC+AGG 0.340365 8_1:-84338579 Msa1220940:CDS
CAAGATCATGACGACTTTAT+GGG 0.350066 8_1:-84338049 Msa1220940:CDS
CTCTGCCAGGGGACAACGGG+CGG 0.350986 8_1:+84343501 None:intergenic
GCTGACAATGGTCAAGATCT+TGG 0.352016 8_1:-84338103 Msa1220940:CDS
GAAAAGTTTATCTCAATTCC+AGG 0.356244 8_1:-84342031 Msa1220940:CDS
TATAGGCTGGGAGTTTCTAA+TGG 0.357733 8_1:-84344140 Msa1220940:intron
ATCTCTCAGCAGACTGGGTT+GGG 0.358629 8_1:-84344089 Msa1220940:CDS
GGTTTAGTTGGGTCAGTAGA+TGG 0.361177 8_1:-84342717 Msa1220940:intron
TAAAATGAATACTGCTATTC+GGG 0.363800 8_1:-84343685 Msa1220940:CDS
TGGTTTCCAGGAAACTAAAC+AGG 0.366541 8_1:-84344605 Msa1220940:CDS
CGGGCTCCACGGTCAGGTTC+AGG 0.366569 8_1:-84343666 Msa1220940:CDS
CTTGTTTCTGGTGAAGAACT+TGG 0.370409 8_1:-84343153 Msa1220940:CDS
GTTCGGAGGCAAGGCAGGAC+GGG 0.371161 8_1:-84343123 Msa1220940:CDS
ACCAAGGAAAAGGATGAGTT+TGG 0.375412 8_1:-84338208 Msa1220940:CDS
ATAAAACCATCCTATGTAAC+TGG 0.376313 8_1:+84337907 None:intergenic
CCGAGGAAGATATTACTTAC+TGG 0.379351 8_1:-84342507 Msa1220940:CDS
CCAAGCTTCTCAGATGTCAT+TGG 0.379521 8_1:+84343069 None:intergenic
AGGAACAAATCCTTGAATAA+AGG 0.379871 8_1:+84339000 None:intergenic
GTTACCAAGTTAGACACCTT+TGG 0.380300 8_1:+84343189 None:intergenic
TAAACCTGTTAATGGTTTCC+AGG 0.380515 8_1:-84344617 Msa1220940:CDS
GTTTCCTGGAAACCATTAAC+AGG 0.382805 8_1:+84344613 None:intergenic
TGCTGAGTTGCTTTCTGCTT+AGG 0.385023 8_1:+84338331 None:intergenic
AATTCTCTCGTCAGGCCATC+AGG 0.386699 8_1:-84344805 Msa1220940:CDS
CTATTGGAGCTTCAAAGTAT+TGG 0.387033 8_1:-84340619 Msa1220940:CDS
GATGTGGCTGGTAATGATAT+TGG 0.387917 8_1:-84343387 Msa1220940:CDS
GAACAGCTGTTCCTAATGAT+TGG 0.389264 8_1:-84343611 Msa1220940:CDS
TGAACAACCGGTGACATCTT+GGG 0.395027 8_1:+84343636 None:intergenic
TGAGAAAGCTCCCAATCATT+AGG 0.397045 8_1:+84343600 None:intergenic
TTTCTGCTTAGGCTTTGTTT+TGG 0.400504 8_1:+84338342 None:intergenic
GGAACCACCCTCTGCAATCC+TGG 0.401154 8_1:+84342013 None:intergenic
TATAAATGATAAGCTTCTAT+TGG 0.401761 8_1:-84340635 Msa1220940:CDS
GTTAATAGATATGGATTGAT+TGG 0.401987 8_1:-84341093 Msa1220940:CDS
TCGCCGAGCACGTCCATTCC+AGG 0.402237 8_1:+84338139 None:intergenic
TTTCAGCGAGCCTTTATTCA+AGG 0.402477 8_1:-84339010 Msa1220940:CDS
GGCCTCTGCCAGGGGACAAC+GGG 0.402964 8_1:+84343498 None:intergenic
GTTCCATCTGCTTCCAAAAT+GGG 0.405262 8_1:+84342548 None:intergenic
AATTGTTCCTTGATGATGTC+GGG 0.405983 8_1:-84338543 Msa1220940:CDS
CCTAGTAATATCCTCCGATA+TGG 0.406751 8_1:+84340379 None:intergenic
ATGAACAACCGGTGACATCT+TGG 0.407195 8_1:+84343635 None:intergenic
TTTCTTCTTATAGCCTGAAA+TGG 0.408158 8_1:-84340420 Msa1220940:intron
GATAATGAATCTGAGCTTGA+TGG 0.412037 8_1:-84340895 Msa1220940:CDS
CTTCCCCGCCCGTTGTCCCC+TGG 0.414712 8_1:-84343506 Msa1220940:CDS
TTTGGGTTGAATCCAAGCTT+TGG 0.416009 8_1:-84340739 Msa1220940:CDS
ATATGCTTCTCCTCTGTCTC+TGG 0.416454 8_1:-84338911 Msa1220940:CDS
ACCTATTGTAGGTGATGGTT+GGG 0.417451 8_1:-84344710 Msa1220940:CDS
AAGCTACGGATTGCCAATAA+TGG 0.417615 8_1:-84344760 Msa1220940:CDS
GTTTCTGTAAATGGCCTCCT+TGG 0.419865 8_1:-84338304 Msa1220940:CDS
ATTTCCTAACAATGCTATGC+TGG 0.420888 8_1:+84338965 None:intergenic
CTTGGCCGTTTCTATGGGTA+GGG 0.421449 8_1:+84344057 None:intergenic
ATAATGGTTATGGAATTATT+GGG 0.423024 8_1:-84340804 Msa1220940:CDS
TGACAAGGGAATTATTATCT+TGG 0.424434 8_1:+84344039 None:intergenic
GGTTTATTCAATGTAGTACT+TGG 0.424721 8_1:+84344634 None:intergenic
ATGGTCAAGATCTTGGTTCA+TGG 0.428019 8_1:-84338096 Msa1220940:CDS
AACGACTTGCTACTGATTCT+CGG 0.429342 8_1:-84344573 Msa1220940:CDS
AAATTCAAGCAATAACAAAA+TGG 0.433171 8_1:-84339109 Msa1220940:CDS
TGAGGTTAAACCAAAAGAAA+AGG 0.435183 8_1:-84343256 Msa1220940:CDS
TGCCTGTATCTTCAAATTGG+TGG 0.435626 8_1:+84339040 None:intergenic
TTTATTGAGTTGCCAAAGCT+TGG 0.436808 8_1:+84340727 None:intergenic
ATTGTATTGCAACTCTGAAC+AGG 0.438724 8_1:+84340666 None:intergenic
GCTATTCGGGCTCCACGGTC+AGG 0.441787 8_1:-84343672 Msa1220940:CDS
TTTCTTTCTGCAGCTTCCAT+GGG 0.442842 8_1:-84338709 Msa1220940:intron
TTGTCCAACCTCCAGCTGCC+TGG 0.442909 8_1:-84338157 Msa1220940:CDS
AAGGATGAGTTTGGCTTGGG+TGG 0.443057 8_1:-84338199 Msa1220940:CDS
TTATCTGAAAGTGAAGAGTC+TGG 0.443993 8_1:-84343285 Msa1220940:CDS
CCTTTCAGACTTGAATATGA+TGG 0.446037 8_1:-84338005 Msa1220940:CDS
CCGGTTCCTTCAAACATAGA+TGG 0.446868 8_1:-84341129 Msa1220940:CDS
CCAGAAATCTTCATTTCCAC+TGG 0.447790 8_1:+84338588 None:intergenic
AGGCACAAAACTTGTTCTTC+TGG 0.452853 8_1:+84343455 None:intergenic
TCTGCCAGGGGACAACGGGC+GGG 0.454327 8_1:+84343502 None:intergenic
GTGAAGGGTGTTATCAAATC+TGG 0.454632 8_1:-84342672 Msa1220940:intron
CTGTTAGTTCAGACAAGGAT+AGG 0.454762 8_1:-84343998 Msa1220940:CDS
GGAGTTATTGGCTGCTGTGA+AGG 0.454792 8_1:-84342688 Msa1220940:CDS
TTATGGAATTATTGGGAAAC+CGG 0.455569 8_1:-84340797 Msa1220940:CDS
CCATCTATGTTTGAAGGAAC+CGG 0.457111 8_1:+84341129 None:intergenic
AGGAGCGAGAGGGAGAGAGA+TGG 0.457279 8_1:-84338454 Msa1220940:CDS
ATGTGGCTGGTAATGATATT+GGG 0.458028 8_1:-84343386 Msa1220940:CDS
GTTGCCAGAGCAACCAAAAC+CGG 0.459106 8_1:-84338278 Msa1220940:CDS
TGTTAGGAAATCAGATGGAT+TGG 0.459381 8_1:-84338953 Msa1220940:CDS
TACCTATTGTAGGTGATGGT+TGG 0.460317 8_1:-84344711 Msa1220940:CDS
TCGGAGGATATTACTAGGTT+AGG 0.460701 8_1:-84340374 Msa1220940:CDS
CTGCCAGGGGACAACGGGCG+GGG 0.460809 8_1:+84343503 None:intergenic
AATTCAAGTACTCCGGGGAT+TGG 0.461777 8_1:-84338508 Msa1220940:CDS
TACCATGTTATGATCTCCCT+TGG 0.463961 8_1:+84341002 None:intergenic
ATGGTGTTCGGAGGCAAGGC+AGG 0.465540 8_1:-84343128 Msa1220940:CDS
CGATCAGAAAGCTTCCTTGT+TGG 0.466660 8_1:+84342880 None:intergenic
CAAAAGGAAAGAGGAGCGAG+AGG 0.466844 8_1:-84338465 Msa1220940:CDS
ATGGACGTGCTCGGCGATCC+CGG 0.467302 8_1:-84338133 Msa1220940:CDS
CGCCCGTTGTCCCCTGGCAG+AGG 0.467706 8_1:-84343500 Msa1220940:CDS
GAAAAGGATGAGTTTGGCTT+GGG 0.468195 8_1:-84338202 Msa1220940:CDS
TGTTCCAAAGGTGTCTAACT+TGG 0.468790 8_1:-84343193 Msa1220940:CDS
TCTCTAACAAGCAGCACAAA+AGG 0.470247 8_1:-84338481 Msa1220940:CDS
GCTGGTAATGATATTGGGTT+AGG 0.471374 8_1:-84343381 Msa1220940:CDS
GCACGTCCATTCCAGGCAGC+TGG 0.471918 8_1:+84338146 None:intergenic
AACAGCTGTTCCTAATGATT+GGG 0.472608 8_1:-84343610 Msa1220940:CDS
CTGTCTCTGGAAGCAACACC+AGG 0.473593 8_1:-84338898 Msa1220940:intron
GGAAAAGGATGAGTTTGGCT+TGG 0.474081 8_1:-84338203 Msa1220940:CDS
TACGCACCAATTCTCTCGTC+AGG 0.474209 8_1:-84344813 Msa1220940:CDS
TTCCCTTGTCAACGATAAGC+GGG 0.474934 8_1:-84344027 Msa1220940:CDS
GATGGAATCTCTCAGCAGAC+TGG 0.475087 8_1:-84344095 Msa1220940:CDS
CCATATCGGAGGATATTACT+AGG 0.476716 8_1:-84340379 Msa1220940:CDS
AATGGTCAAGCAAGCTGCAC+TGG 0.477784 8_1:-84339091 Msa1220940:CDS
CAACCTCCAGCTGCCTGGAA+TGG 0.478670 8_1:-84338152 Msa1220940:CDS
GTAAGCTTACCACTGATTCA+AGG 0.479044 8_1:+84340590 None:intergenic
GCATCAATTGTACCTGTCCT+TGG 0.479173 8_1:+84340342 None:intergenic
TCAGAAAGCTTCCTTGTTGG+TGG 0.479190 8_1:+84342883 None:intergenic
TTAGTACTATTAACACCAGC+TGG 0.479647 8_1:+84343561 None:intergenic
TCATCATTACTTGAAACAAC+AGG 0.481484 8_1:+84343435 None:intergenic
TGGAGGTTGGACAAATCAAT+TGG 0.482080 8_1:+84338166 None:intergenic
TACCACCAATTTGAAGATAC+AGG 0.482843 8_1:-84339042 Msa1220940:CDS
TGATGGCCTGACGAGAGAAT+TGG 0.482919 8_1:+84344807 None:intergenic
CAAGCATCATCAAGTGCTAA+AGG 0.485119 8_1:-84338376 Msa1220940:CDS
AGAGTTGCAATACAATAGCT+TGG 0.485205 8_1:-84340659 Msa1220940:CDS
GAGTTGCAATACAATAGCTT+GGG 0.485947 8_1:-84340658 Msa1220940:CDS
GAGCGAAACTTACCTATTGT+AGG 0.486176 8_1:-84344721 Msa1220940:CDS
AAGAACTTGGAGATGGTGTT+CGG 0.487321 8_1:-84343140 Msa1220940:CDS
AGAGACAGAGGAGAAGCATA+TGG 0.488395 8_1:+84338913 None:intergenic
TGAGAAATTGGTGATGGGCT+CGG 0.489386 8_1:+84338679 None:intergenic
AGAAGAGGATGAAGCCATAT+CGG 0.489438 8_1:-84340393 Msa1220940:CDS
TCGGTTATCAAACTGAAGAA+AGG 0.490916 8_1:+84342526 None:intergenic
CAAGGTAATTCAAGTACTCC+GGG 0.491280 8_1:-84338514 Msa1220940:CDS
GTTGCTCTGGCAACTTGCCA+AGG 0.495656 8_1:+84338287 None:intergenic
GAACAACCGGTGACATCTTG+GGG 0.495883 8_1:+84343637 None:intergenic
TGGCCTCTGCCAGGGGACAA+CGG 0.499000 8_1:+84343497 None:intergenic
GGCATTTGTTAAATGGACAT+TGG 0.499248 8_1:-84339070 Msa1220940:CDS
TATGCTGGGAAGAAGCAGTT+AGG 0.500503 8_1:+84338980 None:intergenic
TGAAGAGTCTGGGGTGGCTG+AGG 0.500599 8_1:-84343274 Msa1220940:CDS
TCAGATGAATTATTTAAAGC+AGG 0.502277 8_1:+84338616 None:intergenic
TTATAGAAATACCAAGGAAA+AGG 0.504891 8_1:-84338218 Msa1220940:CDS
TCCCAACCATCACCTACAAT+AGG 0.505403 8_1:+84344709 None:intergenic
CATCTGCTTCCAAAATGGGC+TGG 0.505424 8_1:+84342552 None:intergenic
TCGGTAGACTTTGAAACAGA+AGG 0.506526 8_1:+84338250 None:intergenic
CGAGAGGGAGAGAGATGGAA+AGG 0.506934 8_1:-84338449 Msa1220940:CDS
ACTGAAAATTAGATAGTGAA+TGG 0.507055 8_1:+84340845 None:intergenic
AGAAATGGAACTACAAAAGC+TGG 0.507275 8_1:-84338403 Msa1220940:CDS
ACCATTGTCAGCAAGGTCAC+CGG 0.507791 8_1:+84338114 None:intergenic
ACAGCTGTTCTATGAACAAC+CGG 0.508478 8_1:+84343624 None:intergenic
TTTGAAACAGAAGGCAATGC+CGG 0.509002 8_1:+84338259 None:intergenic
ATGTTTGAAGGAACCGGAGT+TGG 0.510195 8_1:+84341135 None:intergenic
CAAGTCTGAAAGGTCATCCA+TGG 0.510398 8_1:+84338015 None:intergenic
TCCTTGGTATTTCTATAACT+AGG 0.512532 8_1:+84338223 None:intergenic
TATGTTAGAAAACATTACTC+TGG 0.512782 8_1:-84337713 Msa1220940:three_prime_UTR
CGTCACTCGAAAACAACACT+TGG 0.514317 8_1:+84337831 None:intergenic
TCACAACCATCTATGTTTGA+AGG 0.514741 8_1:+84341123 None:intergenic
AACTTACCTATTGTAGGTGA+TGG 0.516763 8_1:-84344715 Msa1220940:CDS
GAATTGTTCCTTGATGATGT+CGG 0.517234 8_1:-84338544 Msa1220940:CDS
TCTTGGCCGTTTCTATGGGT+AGG 0.518049 8_1:+84344056 None:intergenic
TTCGGAGGCAAGGCAGGACG+GGG 0.518811 8_1:-84343122 Msa1220940:CDS
CATTCCAGGCAGCTGGAGGT+TGG 0.519582 8_1:+84338153 None:intergenic
GAGTTATTGGCTGCTGTGAA+GGG 0.519777 8_1:-84342687 Msa1220940:CDS
ATAATCTGCTGCTGCACTGA+TGG 0.522575 8_1:+84342828 None:intergenic
AAGCACTCTGACTCCAACTC+CGG 0.524066 8_1:-84341148 Msa1220940:CDS
CTTCCAAAATGGGCTGGAGA+AGG 0.528410 8_1:+84342558 None:intergenic
TTAAACCAAAAGAAAAGGGC+AGG 0.529000 8_1:-84343251 Msa1220940:CDS
GAGGTTAAACCAAAAGAAAA+GGG 0.529191 8_1:-84343255 Msa1220940:CDS
GGATTCGTGAGACGTTCAGC+TGG 0.529335 8_1:-84343360 Msa1220940:CDS
AAATAACCAGTTACATAGGA+TGG 0.529556 8_1:-84337913 Msa1220940:three_prime_UTR
TCAAGGTAATTCAAGTACTC+CGG 0.529755 8_1:-84338515 Msa1220940:CDS
ATTATCTTGGCCGTTTCTAT+GGG 0.530350 8_1:+84344052 None:intergenic
AAATTCTGAGAAATTGGTGA+TGG 0.530581 8_1:+84338673 None:intergenic
GGTCATCCATGGGAATTTCA+AGG 0.531070 8_1:+84338026 None:intergenic
TTTGTAGTTCCATTTCTGGA+TGG 0.532261 8_1:+84338409 None:intergenic
AATCTCTCAGCAGACTGGGT+TGG 0.535573 8_1:-84344090 Msa1220940:CDS
AAGGAAGCTTTCTGATCGTA+AGG 0.535690 8_1:-84342875 Msa1220940:CDS
TCTCAATGCCACAAGGTCAC+TGG 0.536594 8_1:-84343094 Msa1220940:CDS
TAGGAAATCAGATGGATTGG+AGG 0.537127 8_1:-84338950 Msa1220940:CDS
TGTTCGGAGGCAAGGCAGGA+CGG 0.537630 8_1:-84343124 Msa1220940:CDS
AGAGAGGTACCATCCAGAAA+TGG 0.539063 8_1:-84338418 Msa1220940:CDS
GAAGAAATAACCAGTTACAT+AGG 0.540275 8_1:-84337917 Msa1220940:three_prime_UTR
TATCTGAAAGTGAAGAGTCT+GGG 0.542796 8_1:-84343284 Msa1220940:CDS
TAAAGCATTAATGTCTAGCT+TGG 0.543499 8_1:-84340689 Msa1220940:CDS
GATGGAGAATTAGAATTGAG+TGG 0.544477 8_1:-84340877 Msa1220940:CDS
CCAGTAAGTAATATCTTCCT+CGG 0.545955 8_1:+84342507 None:intergenic
TTATGATCTCCCTTGGGCAG+TGG 0.546847 8_1:+84341009 None:intergenic
CACATCAGAAACAGCATCCA+CGG 0.547761 8_1:+84343404 None:intergenic
GAAGAGATAGATCTGAAAGC+TGG 0.548176 8_1:-84343222 Msa1220940:CDS
CAAGCAGCACAAAAGGAAAG+AGG 0.548714 8_1:-84338474 Msa1220940:CDS
GGAGATGGTGTTCGGAGGCA+AGG 0.549572 8_1:-84343132 Msa1220940:CDS
GTTAGAGAACTTCCAATCCC+CGG 0.552035 8_1:+84338496 None:intergenic
GAGAGGGAGAGAGATGGAAA+GGG 0.553581 8_1:-84338448 Msa1220940:CDS
CCATTGTCAGCAAGGTCACC+GGG 0.558829 8_1:+84338115 None:intergenic
AAGGATGTGATAAGAATGAA+AGG 0.559534 8_1:-84343008 Msa1220940:intron
ATATCACTTTCATCATGTGC+CGG 0.560029 8_1:+84340778 None:intergenic
TTTCCTAACAATGCTATGCT+GGG 0.562049 8_1:+84338966 None:intergenic
GCTGCTGCACTGATGGCAGT+AGG 0.562066 8_1:+84342835 None:intergenic
CGTACCCCTACCCATAGAAA+CGG 0.564946 8_1:-84344062 Msa1220940:CDS
GATGCTGTTTCTGATGTGGC+TGG 0.565211 8_1:-84343399 Msa1220940:CDS
AGCATTGTTAGGAAATCAGA+TGG 0.566367 8_1:-84338958 Msa1220940:CDS
CCATCATATTCAAGTCTGAA+AGG 0.568785 8_1:+84338005 None:intergenic
CTGCCTGGAATGGACGTGCT+CGG 0.571271 8_1:-84338142 Msa1220940:CDS
AGGCGAGCTTTACCAAGGAC+AGG 0.572551 8_1:-84340354 Msa1220940:intron
TCAGAAACAGCATCCACGGC+AGG 0.573599 8_1:+84343408 None:intergenic
CCCGGTGACCTTGCTGACAA+TGG 0.573635 8_1:-84338115 Msa1220940:CDS
ACCATGTTATGATCTCCCTT+GGG 0.576619 8_1:+84341003 None:intergenic
TAGTACTATTAACACCAGCT+GGG 0.577011 8_1:+84343562 None:intergenic
CCAATGACATCTGAGAAGCT+TGG 0.577012 8_1:-84343069 Msa1220940:CDS
TATGGGCCTTGAAATTCCCA+TGG 0.577062 8_1:-84338032 Msa1220940:CDS
ATGGAATCTCTCAGCAGACT+GGG 0.577276 8_1:-84344094 Msa1220940:CDS
TGTTAGTTCAGACAAGGATA+GGG 0.577411 8_1:-84343997 Msa1220940:CDS
CATAAGCTGTCACAACAAGT+TGG 0.581811 8_1:+84339934 None:intergenic
CTCTTACAAATCAGAGAACA+AGG 0.582091 8_1:-84337684 Msa1220940:three_prime_UTR
AGCTGGACAAAATGTTCCAA+AGG 0.582515 8_1:-84343205 Msa1220940:CDS
GAGAGAGATGGAAAGGGACA+CGG 0.582678 8_1:-84338442 Msa1220940:CDS
ATTCTCTCGTCAGGCCATCA+GGG 0.584314 8_1:-84344804 Msa1220940:CDS
TGGACTTGACCTTGAATCAG+TGG 0.585412 8_1:-84340599 Msa1220940:intron
AGAAAAGTTACCACTGCCCA+AGG 0.585947 8_1:-84341019 Msa1220940:CDS
CGTGGATGCTGTTTCTGATG+TGG 0.587597 8_1:-84343403 Msa1220940:CDS
GATCTTGACCATTGTCAGCA+AGG 0.589061 8_1:+84338107 None:intergenic
CGTCCATTCCAGGCAGCTGG+AGG 0.592370 8_1:+84338149 None:intergenic
TTGGCCGTTTCTATGGGTAG+GGG 0.592568 8_1:+84344058 None:intergenic
TCTCTATCAACAGTCCCTGA+TGG 0.593157 8_1:+84344790 None:intergenic
ATAGAGATAAAGAAAAGCTA+CGG 0.593295 8_1:-84344774 Msa1220940:CDS
TGGAATCCTTGCAGCAAGGT+CGG 0.595199 8_1:-84342910 Msa1220940:intron
GCCTGAAATGGTGCAAGAAG+AGG 0.597062 8_1:-84340408 Msa1220940:CDS
CAATCCATATCTATTAACAA+TGG 0.597593 8_1:+84341098 None:intergenic
CATTGGTGCCAGTGACCTTG+TGG 0.600420 8_1:+84343086 None:intergenic
CTCAATTCCAGGATTGCAGA+GGG 0.600754 8_1:-84342020 Msa1220940:CDS
AAATGGGCTGGAGAAGGAGT+AGG 0.600944 8_1:+84342564 None:intergenic
TGGGCTCGGCTGTGAACCCA+TGG 0.602595 8_1:+84338693 None:intergenic
CATTATTATACCAATAACAA+AGG 0.603194 8_1:-84337954 Msa1220940:three_prime_UTR
AAAAGGAAAGAGGAGCGAGA+GGG 0.603232 8_1:-84338464 Msa1220940:CDS
AATTCTGAGAAATTGGTGAT+GGG 0.605189 8_1:+84338674 None:intergenic
GATAAAGCTGACGAAGGTGA+AGG 0.607931 8_1:+84343303 None:intergenic
GCTCTGGCAACTTGCCAAGG+AGG 0.609512 8_1:+84338290 None:intergenic
TTGGGTCAGTAGATGGACAC+GGG 0.609726 8_1:-84342710 Msa1220940:CDS
GTTGCAGCTAGCAAATCAGA+TGG 0.614494 8_1:-84344113 Msa1220940:CDS
ATTCCCTTGTCAACGATAAG+CGG 0.615124 8_1:-84344028 Msa1220940:CDS
AGTACTATTAACACCAGCTG+GGG 0.615616 8_1:+84343563 None:intergenic
GCTATAAGTCGTTGACAGAG+AGG 0.616818 8_1:+84340979 None:intergenic
TCAGAAGAAGATCGTAGCGG+TGG 0.617335 8_1:-84340946 Msa1220940:CDS
ATTGTTCCTTGATGATGTCG+GGG 0.617816 8_1:-84338542 Msa1220940:CDS
GCTTGTCGAGGTGCATCGAG+TGG 0.617837 8_1:-84339135 Msa1220940:CDS
ATTAATTGACAGGCTTGTCG+AGG 0.619306 8_1:-84339147 Msa1220940:intron
ATCTGAAAGTGAAGAGTCTG+GGG 0.621108 8_1:-84343283 Msa1220940:CDS
CAACTAAGAAGTGCAAGACA+AGG 0.626347 8_1:-84343027 Msa1220940:CDS
AATTCCAGGATTGCAGAGGG+TGG 0.626742 8_1:-84342017 Msa1220940:CDS
AAGTCTGAAAGGTCATCCAT+GGG 0.626836 8_1:+84338016 None:intergenic
TTGGCTGTGAAAGAGATGTC+AGG 0.626925 8_1:-84341074 Msa1220940:CDS
TACTAACAATCGCAAACGTG+TGG 0.628851 8_1:-84343544 Msa1220940:CDS
GCAACTCCTGAACCTGACCG+TGG 0.628986 8_1:+84343660 None:intergenic
GGCGCAGTCTCAATGCCACA+AGG 0.632240 8_1:-84343101 Msa1220940:CDS
TCTGGTGAAGAACTTGGAGA+TGG 0.633085 8_1:-84343147 Msa1220940:CDS
AGGTCGGTCGTCCACCAACA+AGG 0.634464 8_1:-84342894 Msa1220940:CDS
TCTCAATTCCAGGATTGCAG+AGG 0.634864 8_1:-84342021 Msa1220940:CDS
AATTCATCTGAGCAAACCAG+TGG 0.638610 8_1:-84338604 Msa1220940:CDS
GACCCCGCTTATCGTTGACA+AGG 0.638938 8_1:+84344024 None:intergenic
TGAAGATTTCTGGTCAAACA+GGG 0.639834 8_1:-84338578 Msa1220940:CDS
ATACTGCTATTCGGGCTCCA+CGG 0.639890 8_1:-84343677 Msa1220940:CDS
AACTTGGAGATGGTGTTCGG+AGG 0.639929 8_1:-84343137 Msa1220940:CDS
GTTGGGTCAGTAGATGGACA+CGG 0.640060 8_1:-84342711 Msa1220940:CDS
AGAGGATGAAGCCATATCGG+AGG 0.640561 8_1:-84340390 Msa1220940:CDS
TAATGATGAAGCTCCTGCCG+TGG 0.642986 8_1:-84343421 Msa1220940:CDS
TCGTTCTGTTAGTTCAGACA+AGG 0.647341 8_1:-84344003 Msa1220940:CDS
GCCTAGTTATAGAAATACCA+AGG 0.648008 8_1:-84338224 Msa1220940:CDS
TGGTTGAATATTGATGACGA+TGG 0.648043 8_1:-84338076 Msa1220940:CDS
CTTTCAGATAAAGCTGACGA+AGG 0.654396 8_1:+84343297 None:intergenic
TTTCTTCAGTTTGATAACCG+AGG 0.657033 8_1:-84342524 Msa1220940:CDS
AACAACCGGTGACATCTTGG+GGG 0.661134 8_1:+84343638 None:intergenic
TATTACTTACTGGAAGCAGA+AGG 0.666092 8_1:-84342497 Msa1220940:intron
TTGTTCCTTGATGATGTCGG+GGG 0.666945 8_1:-84338541 Msa1220940:CDS
AGGTTAGGCGAGCTTTACCA+AGG 0.670077 8_1:-84340359 Msa1220940:CDS
GGTGTTGCTTCCAGAGACAG+AGG 0.671711 8_1:+84338901 None:intergenic
GAAAAGTTACCACTGCCCAA+GGG 0.674314 8_1:-84341018 Msa1220940:CDS
TGAAAGTGAAGAGTCTGGGG+TGG 0.689292 8_1:-84343280 Msa1220940:CDS
TCCCTTGTCAACGATAAGCG+GGG 0.697454 8_1:-84344026 Msa1220940:CDS
ACCCCGCTTATCGTTGACAA+GGG 0.697989 8_1:+84344025 None:intergenic
GTACTATTAACACCAGCTGG+GGG 0.704073 8_1:+84343564 None:intergenic
GGTTTCCAGGAAACTAAACA+GGG 0.704253 8_1:-84344604 Msa1220940:CDS
TGGAAAGGGACACGGCAGAG+AGG 0.726991 8_1:-84338434 Msa1220940:CDS
GCCCAAGGGAGATCATAACA+TGG 0.735920 8_1:-84341004 Msa1220940:CDS
TGGGTCAGTAGATGGACACG+GGG 0.750888 8_1:-84342709 Msa1220940:CDS
GACAGCTTATGAGAAATACA+CGG 0.751119 8_1:-84339922 Msa1220940:intron
AAGGTAATTCAAGTACTCCG+GGG 0.755279 8_1:-84338513 Msa1220940:CDS
ATATCAGAAGAAGATCGTAG+CGG 0.769117 8_1:-84340949 Msa1220940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATATTTTTTTATTAAA+AGG - chr8_1:84342707-84342726 Msa1220940:CDS 0.0%
!!! TTTATATTTTTTTATTAAAA+GGG - chr8_1:84342708-84342727 Msa1220940:CDS 0.0%
!! AAAAAAAAAAAAAAATTAGC+AGG + chr8_1:84339485-84339504 None:intergenic 10.0%
!! AAATTAAAATTAGCATTTAA+CGG + chr8_1:84342429-84342448 None:intergenic 10.0%
!! CAAAGTAAAAAATCATATAA+AGG + chr8_1:84338533-84338552 None:intergenic 15.0%
!!! TTATATGATTTTTTACTTTG+AGG - chr8_1:84338533-84338552 Msa1220940:CDS 15.0%
!!! ACATTTTTTATATGAATTAC+AGG - chr8_1:84340397-84340416 Msa1220940:CDS 15.0%
!!! AATCTCTTTAATTTTACTAA+TGG - chr8_1:84341941-84341960 Msa1220940:intron 15.0%
!! TCATATAACAAAAATAGTTA+CGG + chr8_1:84342178-84342197 None:intergenic 15.0%
!! AATTAAAATTAGCATTTAAC+GGG + chr8_1:84342428-84342447 None:intergenic 15.0%
!!! TTTCAGTTTAATAGTTTTTG+TGG - chr8_1:84338010-84338029 Msa1220940:CDS 20.0%
!! TACTAAAACATGTTAGTAAA+TGG - chr8_1:84338091-84338110 Msa1220940:CDS 20.0%
!!! ATTTTCATGTATCTTTGTAT+AGG - chr8_1:84338293-84338312 Msa1220940:CDS 20.0%
!! AATCATATAAAGGAGAAAAT+GGG + chr8_1:84338523-84338542 None:intergenic 20.0%
!! AAATCATATAAAGGAGAAAA+TGG + chr8_1:84338524-84338543 None:intergenic 20.0%
!!! AAATACATGTCTAAAACAAA+AGG + chr8_1:84340702-84340721 None:intergenic 20.0%
!!! AAATCTTTTCTGCATTAAAT+TGG - chr8_1:84341190-84341209 Msa1220940:intron 20.0%
!!! ATTAAATTGGTTCGAAAAAA+TGG - chr8_1:84341203-84341222 Msa1220940:intron 20.0%
!! AATAATGGTTATGGAATTAT+TGG - chr8_1:84341645-84341664 Msa1220940:intron 20.0%
!! ATAATGGTTATGGAATTATT+GGG - chr8_1:84341646-84341665 Msa1220940:intron 20.0%
!!! ATGATTGATATTCCTAATTT+TGG - chr8_1:84341693-84341712 Msa1220940:intron 20.0%
!!! TGATTGATATTCCTAATTTT+GGG - chr8_1:84341694-84341713 Msa1220940:intron 20.0%
!! TATAAATGATAAGCTTCTAT+TGG - chr8_1:84341815-84341834 Msa1220940:intron 20.0%
!! ATATAACAAAAATAGTTACG+GGG + chr8_1:84342176-84342195 None:intergenic 20.0%
!! CATATAACAAAAATAGTTAC+GGG + chr8_1:84342177-84342196 None:intergenic 20.0%
!!! TTTTATTAATTAAATCTCCC+CGG + chr8_1:84342239-84342258 None:intergenic 20.0%
!!! TGCTAATTTTAATTTTTGTG+TGG - chr8_1:84342434-84342453 Msa1220940:intron 20.0%
!!! GCTAATTTTAATTTTTGTGT+GGG - chr8_1:84342435-84342454 Msa1220940:intron 20.0%
!!! TAAATATAAACTTGTTTGAC+AGG - chr8_1:84342470-84342489 Msa1220940:intron 20.0%
!!! AAATATAAACTTGTTTGACA+GGG - chr8_1:84342471-84342490 Msa1220940:intron 20.0%
!! TACTGTTTGTTTATATAATC+TGG - chr8_1:84342573-84342592 Msa1220940:intron 20.0%
!! GATATTTATATTACACTACT+GGG - chr8_1:84342731-84342750 Msa1220940:intron 20.0%
!!! AATCATTTTAGGCAAATAAT+AGG + chr8_1:84343056-84343075 None:intergenic 20.0%
!! TTGCCTAAAATGATTAAAAT+TGG - chr8_1:84343061-84343080 Msa1220940:CDS 20.0%
!! TCTAATAGAAAATAGAATGT+TGG + chr8_1:84343102-84343121 None:intergenic 20.0%
!! TTTCTATTAGAGTCAATAAA+AGG - chr8_1:84343111-84343130 Msa1220940:CDS 20.0%
!! TTCTATTAGAGTCAATAAAA+GGG - chr8_1:84343112-84343131 Msa1220940:CDS 20.0%
!! AAATTCAAGCAATAACAAAA+TGG - chr8_1:84343341-84343360 Msa1220940:CDS 20.0%
!! AAAACAACATAAAATTATGC+AGG + chr8_1:84343596-84343615 None:intergenic 20.0%
!! CATTATTATACCAATAACAA+AGG - chr8_1:84344496-84344515 Msa1220940:intron 20.0%
!! ATTAGGTTATATAGATTCTT+TGG - chr8_1:84344583-84344602 Msa1220940:CDS 20.0%
!!! TTTTCTAACATATAATCACT+AGG + chr8_1:84344729-84344748 None:intergenic 20.0%
! ATAGAGATAAAGAAAAGCTA+CGG - chr8_1:84337676-84337695 Msa1220940:three_prime_UTR 25.0%
! ACATTGAATAAACCTGTTAA+TGG - chr8_1:84337825-84337844 Msa1220940:three_prime_UTR 25.0%
!! GTAACGATTCTAATTCTTTT+AGG - chr8_1:84337910-84337929 Msa1220940:three_prime_UTR 25.0%
!!! GATTCTAATTCTTTTAGGTA+TGG - chr8_1:84337915-84337934 Msa1220940:three_prime_UTR 25.0%
! AAAGAAAGAGTTCTATTGTT+AGG - chr8_1:84338130-84338149 Msa1220940:CDS 25.0%
! AAGAAAGAGTTCTATTGTTA+GGG - chr8_1:84338131-84338150 Msa1220940:CDS 25.0%
!!! CTTTCTTGTTTTTATGACAA+TGG - chr8_1:84338167-84338186 Msa1220940:CDS 25.0%
! TTCAAATCATAAACATGAAG+AGG + chr8_1:84338655-84338674 None:intergenic 25.0%
! CTAAAATGAATACTGCTATT+CGG - chr8_1:84338764-84338783 Msa1220940:intron 25.0%
! TAAAATGAATACTGCTATTC+GGG - chr8_1:84338765-84338784 Msa1220940:intron 25.0%
! CATAAAAACCTTAAAGACTT+CGG + chr8_1:84339522-84339541 None:intergenic 25.0%
! ACGAAACAAAAAAATGAACA+AGG + chr8_1:84339712-84339731 None:intergenic 25.0%
!!! TGTTCATTTTTTTGTTTCGT+TGG - chr8_1:84339712-84339731 Msa1220940:intron 25.0%
! AATTTCCATCATAATTCCTA+TGG + chr8_1:84340081-84340100 None:intergenic 25.0%
! TATGTGCAATTAAGATACTA+TGG + chr8_1:84340143-84340162 None:intergenic 25.0%
! TGTGTAAGTAATTATTGATG+AGG - chr8_1:84340185-84340204 Msa1220940:intron 25.0%
! AACAGAATAAAAAAGTTGAG+AGG + chr8_1:84340500-84340519 None:intergenic 25.0%
! TCTATGTATCTGATATCATT+TGG - chr8_1:84340805-84340824 Msa1220940:CDS 25.0%
! ACCAAATCTTAAAAAGCTTA+CGG - chr8_1:84340882-84340901 Msa1220940:CDS 25.0%
! ACTAATGCAGAAAAGATATA+CGG + chr8_1:84341127-84341146 None:intergenic 25.0%
!! AATAAAAAGATTTGAAGCGA+AGG + chr8_1:84341162-84341181 None:intergenic 25.0%
!! TTCGCTTCAAATCTTTTTAT+TGG - chr8_1:84341161-84341180 Msa1220940:CDS 25.0%
! GATTCAAGATTTACCTAAAA+GGG + chr8_1:84341282-84341301 None:intergenic 25.0%
! TGATTCAAGATTTACCTAAA+AGG + chr8_1:84341283-84341302 None:intergenic 25.0%
! GAAACCATTGTTAATAGATA+TGG - chr8_1:84341348-84341367 Msa1220940:intron 25.0%
! CAATCCATATCTATTAACAA+TGG + chr8_1:84341355-84341374 None:intergenic 25.0%
!! GTTAATAGATATGGATTGAT+TGG - chr8_1:84341357-84341376 Msa1220940:intron 25.0%
! ACTGAAAATTAGATAGTGAA+TGG + chr8_1:84341608-84341627 None:intergenic 25.0%
! TATAACAAAAATAGTTACGG+GGG + chr8_1:84342175-84342194 None:intergenic 25.0%
! ACAATAGTTGCATAAAATGT+TGG - chr8_1:84342680-84342699 Msa1220940:CDS 25.0%
! CAATAGTTGCATAAAATGTT+GGG - chr8_1:84342681-84342700 Msa1220940:CDS 25.0%
! AATAGTTGCATAAAATGTTG+GGG - chr8_1:84342682-84342701 Msa1220940:CDS 25.0%
! GGATATTTATATTACACTAC+TGG - chr8_1:84342730-84342749 Msa1220940:intron 25.0%
! TTCATATTTCATAATGAGGT+AGG + chr8_1:84342909-84342928 None:intergenic 25.0%
! GGATTTCATATTTCATAATG+AGG + chr8_1:84342913-84342932 None:intergenic 25.0%
! TCAACATTTCCAAATGTAAA+TGG + chr8_1:84342938-84342957 None:intergenic 25.0%
!!! AGGCCAATTTTAATCATTTT+AGG + chr8_1:84343067-84343086 None:intergenic 25.0%
!!! AAATGATTAAAATTGGCCTT+AGG - chr8_1:84343068-84343087 Msa1220940:CDS 25.0%
! TTGACAAATGATTAATTGAC+AGG - chr8_1:84343293-84343312 Msa1220940:CDS 25.0%
!! TTATCCAAATTCTGAGAAAT+TGG + chr8_1:84343786-84343805 None:intergenic 25.0%
!! TCAGATGAATTATTTAAAGC+AGG + chr8_1:84343837-84343856 None:intergenic 25.0%
!! ATTTCTATAACTAGGCTTTT+CGG + chr8_1:84344222-84344241 None:intergenic 25.0%
! TTATAGAAATACCAAGGAAA+AGG - chr8_1:84344232-84344251 Msa1220940:intron 25.0%
!! TACTTTGTTTCCTTTGTTAT+TGG + chr8_1:84344509-84344528 None:intergenic 25.0%
!! TGTAAAGATCTTTTTGTTCA+AGG - chr8_1:84344689-84344708 Msa1220940:CDS 25.0%
! TATGTTAGAAAACATTACTC+TGG - chr8_1:84344737-84344756 Msa1220940:CDS 25.0%
ACTCTGAATTACACCATTAT+TGG + chr8_1:84337706-84337725 None:intergenic 30.0%
GGTTTATTCAATGTAGTACT+TGG + chr8_1:84337819-84337838 None:intergenic 30.0%
!! TCTTTTAGGTATGGAAGTAT+TGG - chr8_1:84337924-84337943 Msa1220940:three_prime_UTR 30.0%
!!! CTTTTAGGTATGGAAGTATT+GGG - chr8_1:84337925-84337944 Msa1220940:three_prime_UTR 30.0%
ACATGTTAGTAAATGGTGAA+AGG - chr8_1:84338098-84338117 Msa1220940:CDS 30.0%
!! ACAATGGCTTTAAACTCTAA+TGG - chr8_1:84338183-84338202 Msa1220940:CDS 30.0%
TGACAAGGGAATTATTATCT+TGG + chr8_1:84338414-84338433 None:intergenic 30.0%
!! GGTTTTAATCACTAATCACA+AGG + chr8_1:84338634-84338653 None:intergenic 30.0%
!! AGTATTCATTTTAGCACTTG+AGG + chr8_1:84338758-84338777 None:intergenic 30.0%
TCATCATTACTTGAAACAAC+AGG + chr8_1:84339018-84339037 None:intergenic 30.0%
!!! CCTTTTAATCTAATTTGCTG+AGG + chr8_1:84339123-84339142 None:intergenic 30.0%
CCTCAGCAAATTAGATTAAA+AGG - chr8_1:84339120-84339139 Msa1220940:CDS 30.0%
TGAGGTTAAACCAAAAGAAA+AGG - chr8_1:84339194-84339213 Msa1220940:intron 30.0%
GAGGTTAAACCAAAAGAAAA+GGG - chr8_1:84339195-84339214 Msa1220940:intron 30.0%
AAGGATGTGATAAGAATGAA+AGG - chr8_1:84339442-84339461 Msa1220940:intron 30.0%
!!! CGAAGTCTTTAAGGTTTTTA+TGG - chr8_1:84339520-84339539 Msa1220940:intron 30.0%
!!! TTTTGTTTCGTTGGTTTAGT+TGG - chr8_1:84339721-84339740 Msa1220940:intron 30.0%
!! TTTGTTTCGTTGGTTTAGTT+GGG - chr8_1:84339722-84339741 Msa1220940:intron 30.0%
CTTTAAATTACTCCATCAGA+GGG + chr8_1:84339849-84339868 None:intergenic 30.0%
ACTTTAAATTACTCCATCAG+AGG + chr8_1:84339850-84339869 None:intergenic 30.0%
!! GATGCTTTAGATTTTTGTGA+TGG - chr8_1:84340114-84340133 Msa1220940:CDS 30.0%
! GTTTTGTCCTATTAGATCAT+TGG - chr8_1:84340250-84340269 Msa1220940:intron 30.0%
! CAAGAATCTGAATCTGAAAT+CGG - chr8_1:84340371-84340390 Msa1220940:CDS 30.0%
! AAGAATCTGAATCTGAAATC+GGG - chr8_1:84340372-84340391 Msa1220940:CDS 30.0%
GAAAAGTTTATCTCAATTCC+AGG - chr8_1:84340419-84340438 Msa1220940:intron 30.0%
! GAGTAATTAAGGTGTTTGTT+AGG + chr8_1:84340609-84340628 None:intergenic 30.0%
AACAAACACCTTAATTACTC+TGG - chr8_1:84340609-84340628 Msa1220940:CDS 30.0%
ACAAACACCTTAATTACTCT+GGG - chr8_1:84340610-84340629 Msa1220940:CDS 30.0%
TAGTAAACCCAGAGTAATTA+AGG + chr8_1:84340620-84340639 None:intergenic 30.0%
! TGGTAACTATATTGACTAGA+TGG - chr8_1:84340825-84340844 Msa1220940:CDS 30.0%
!!! TCCGTAAGCTTTTTAAGATT+TGG + chr8_1:84340886-84340905 None:intergenic 30.0%
! ACCTTTTCTTCTCTATATGA+TGG - chr8_1:84340944-84340963 Msa1220940:CDS 30.0%
TCCATCATATAGAGAAGAAA+AGG + chr8_1:84340948-84340967 None:intergenic 30.0%
!! CTCTATATGATGGAAGTTTT+TGG - chr8_1:84340954-84340973 Msa1220940:CDS 30.0%
! AGTGAAGTGTTAAAGAAGTT+TGG + chr8_1:84341257-84341276 None:intergenic 30.0%
TCTTCTCATTCTGCTAATAA+TGG - chr8_1:84341630-84341649 Msa1220940:intron 30.0%
CATTCTGCTAATAATGGTTA+TGG - chr8_1:84341636-84341655 Msa1220940:intron 30.0%
TTATGGAATTATTGGGAAAC+CGG - chr8_1:84341653-84341672 Msa1220940:intron 30.0%
! TAAAGCATTAATGTCTAGCT+TGG - chr8_1:84341761-84341780 Msa1220940:intron 30.0%
ACAATATAGTCAAAAGTCAC+TGG + chr8_1:84341895-84341914 None:intergenic 30.0%
TTTCTTCTTATAGCCTGAAA+TGG - chr8_1:84342030-84342049 Msa1220940:CDS 30.0%
TTTACTTTCTTCTGTATCGT+AGG - chr8_1:84342311-84342330 Msa1220940:intron 30.0%
! ATCGAGCAAATTTTTCTTCT+TGG + chr8_1:84342340-84342359 None:intergenic 30.0%
! AAGAAGAAAAATTTGCTCGA+TGG - chr8_1:84342339-84342358 Msa1220940:intron 30.0%
! TAGCATTTAACGGGTAAAAA+TGG + chr8_1:84342419-84342438 None:intergenic 30.0%
ATATTTCATAATGAGGTAGG+AGG + chr8_1:84342906-84342925 None:intergenic 30.0%
GAAATCCTACCATTTACATT+TGG - chr8_1:84342926-84342945 Msa1220940:intron 30.0%
CATTTCCAAATGTAAATGGT+AGG + chr8_1:84342934-84342953 None:intergenic 30.0%
TTGGAAATGTTGAATCTCAA+AGG - chr8_1:84342945-84342964 Msa1220940:intron 30.0%
TGCTTACAAATACCAAGAAT+GGG + chr8_1:84343012-84343031 None:intergenic 30.0%
TTGCTTACAAATACCAAGAA+TGG + chr8_1:84343013-84343032 None:intergenic 30.0%
! ATAGGTCAAAGCATGAATTT+TGG + chr8_1:84343038-84343057 None:intergenic 30.0%
TATTAGAGTCAATAAAAGGG+TGG - chr8_1:84343115-84343134 Msa1220940:CDS 30.0%
TGACGTAATTATGCAATACA+GGG + chr8_1:84343259-84343278 None:intergenic 30.0%
ATGACGTAATTATGCAATAC+AGG + chr8_1:84343260-84343279 None:intergenic 30.0%
AGGAACAAATCCTTGAATAA+AGG + chr8_1:84343453-84343472 None:intergenic 30.0%
! AATTCTGAGAAATTGGTGAT+GGG + chr8_1:84343779-84343798 None:intergenic 30.0%
! AAATTCTGAGAAATTGGTGA+TGG + chr8_1:84343780-84343799 None:intergenic 30.0%
ATCACCAATTTCTCAGAATT+TGG - chr8_1:84343779-84343798 Msa1220940:intron 30.0%
! TCCTTGGTATTTCTATAACT+AGG + chr8_1:84344230-84344249 None:intergenic 30.0%
GAAGAAATAACCAGTTACAT+AGG - chr8_1:84344533-84344552 Msa1220940:CDS 30.0%
AAATAACCAGTTACATAGGA+TGG - chr8_1:84344537-84344556 Msa1220940:CDS 30.0%
ATAAAACCATCCTATGTAAC+TGG + chr8_1:84344546-84344565 None:intergenic 30.0%
!! AGTTACATAGGATGGTTTTA+TGG - chr8_1:84344545-84344564 Msa1220940:CDS 30.0%
GAACAAAAAGATCTTTACAG+TGG + chr8_1:84344688-84344707 None:intergenic 30.0%
AACTTACCTATTGTAGGTGA+TGG - chr8_1:84337735-84337754 Msa1220940:three_prime_UTR 35.0%
TAAACCTGTTAATGGTTTCC+AGG - chr8_1:84337833-84337852 Msa1220940:three_prime_UTR 35.0%
! CTATTGTTAGGGATTTTGCT+AGG - chr8_1:84338142-84338161 Msa1220940:CDS 35.0%
TCATGTATCTTTGTATAGGC+TGG - chr8_1:84338297-84338316 Msa1220940:CDS 35.0%
CATGTATCTTTGTATAGGCT+GGG - chr8_1:84338298-84338317 Msa1220940:CDS 35.0%
ATTATCTTGGCCGTTTCTAT+GGG + chr8_1:84338401-84338420 None:intergenic 35.0%
TATTATCTTGGCCGTTTCTA+TGG + chr8_1:84338402-84338421 None:intergenic 35.0%
TGTTAGTTCAGACAAGGATA+GGG - chr8_1:84338453-84338472 Msa1220940:CDS 35.0%
! CTCCAAAAGCACATAGAAAT+GGG + chr8_1:84338611-84338630 None:intergenic 35.0%
! CATATCATGTTTTATGCCCA+GGG - chr8_1:84338696-84338715 Msa1220940:CDS 35.0%
!! TCATTTTAGCACTTGAGGTA+GGG + chr8_1:84338753-84338772 None:intergenic 35.0%
!! TTCATTTTAGCACTTGAGGT+AGG + chr8_1:84338754-84338773 None:intergenic 35.0%
AACAGCTGTTCCTAATGATT+GGG - chr8_1:84338840-84338859 Msa1220940:intron 35.0%
TAGTACTATTAACACCAGCT+GGG + chr8_1:84338891-84338910 None:intergenic 35.0%
TTAGTACTATTAACACCAGC+TGG + chr8_1:84338892-84338911 None:intergenic 35.0%
! ATGTGGCTGGTAATGATATT+GGG - chr8_1:84339064-84339083 Msa1220940:CDS 35.0%
TTATCTGAAAGTGAAGAGTC+TGG - chr8_1:84339165-84339184 Msa1220940:intron 35.0%
TATCTGAAAGTGAAGAGTCT+GGG - chr8_1:84339166-84339185 Msa1220940:intron 35.0%
TTAAACCAAAAGAAAAGGGC+AGG - chr8_1:84339199-84339218 Msa1220940:intron 35.0%
AGAAACAAGCTTACTCTTTC+TGG + chr8_1:84339286-84339305 None:intergenic 35.0%
! AGAAAGAGTAAGCTTGTTTC+TGG - chr8_1:84339285-84339304 Msa1220940:intron 35.0%
TCTGAGAAGCTTGGAAAAAT+AGG - chr8_1:84339390-84339409 Msa1220940:intron 35.0%
CCATCAGAGGGAAATTATTT+AGG + chr8_1:84339837-84339856 None:intergenic 35.0%
CCTAAATAATTTCCCTCTGA+TGG - chr8_1:84339834-84339853 Msa1220940:intron 35.0%
TCGGTTATCAAACTGAAGAA+AGG + chr8_1:84339927-84339946 None:intergenic 35.0%
! TTTCTTCAGTTTGATAACCG+AGG - chr8_1:84339926-84339945 Msa1220940:CDS 35.0%
CCAGTAAGTAATATCTTCCT+CGG + chr8_1:84339946-84339965 None:intergenic 35.0%
TATTACTTACTGGAAGCAGA+AGG - chr8_1:84339953-84339972 Msa1220940:CDS 35.0%
CACTTCCATAGGAATTATGA+TGG - chr8_1:84340073-84340092 Msa1220940:CDS 35.0%
! CCTTGTTGTGTTATTGTATG+CGG - chr8_1:84340212-84340231 Msa1220940:intron 35.0%
TGTCCTATTAGATCATTGGT+TGG - chr8_1:84340254-84340273 Msa1220940:intron 35.0%
GAACCAACCAATGATCTAAT+AGG + chr8_1:84340260-84340279 None:intergenic 35.0%
!! AGATCATTGGTTGGTTCTAT+TGG - chr8_1:84340263-84340282 Msa1220940:intron 35.0%
GATGCAATGAAATGTGTCTT+AGG - chr8_1:84340285-84340304 Msa1220940:intron 35.0%
ATTCTTGAGCAATTGCAGAT+GGG + chr8_1:84340358-84340377 None:intergenic 35.0%
!! GATTTTAAGAAAGTAGGGAG+TGG + chr8_1:84340461-84340480 None:intergenic 35.0%
!! CGGCAGATTTTAAGAAAGTA+GGG + chr8_1:84340466-84340485 None:intergenic 35.0%
!! ACGGCAGATTTTAAGAAAGT+AGG + chr8_1:84340467-84340486 None:intergenic 35.0%
GTTAGGTACATCTAACAAGA+GGG + chr8_1:84340528-84340547 None:intergenic 35.0%
AGTTAGGTACATCTAACAAG+AGG + chr8_1:84340529-84340548 None:intergenic 35.0%
! AGGTGTTTGTTAGGTGAAAT+AGG + chr8_1:84340600-84340619 None:intergenic 35.0%
CAATTAGAAGATAAGCGCAA+TGG - chr8_1:84340674-84340693 Msa1220940:CDS 35.0%
GCTTAGATCTGATAAAGTAG+TGG - chr8_1:84340911-84340930 Msa1220940:CDS 35.0%
!!! TGGAAGTTTTTGGCTGTTAT+TGG - chr8_1:84340964-84340983 Msa1220940:CDS 35.0%
! TGTTATGTTCTGAACCAACA+TGG - chr8_1:84341063-84341082 Msa1220940:CDS 35.0%
! AACACTTCACTTACCCTTTT+AGG - chr8_1:84341266-84341285 Msa1220940:intron 35.0%
TCACAACCATCTATGTTTGA+AGG + chr8_1:84341330-84341349 None:intergenic 35.0%
ATATCAGAAGAAGATCGTAG+CGG - chr8_1:84341501-84341520 Msa1220940:intron 35.0%
GATAATGAATCTGAGCTTGA+TGG - chr8_1:84341555-84341574 Msa1220940:intron 35.0%
GATGGAGAATTAGAATTGAG+TGG - chr8_1:84341573-84341592 Msa1220940:intron 35.0%
ATATCACTTTCATCATGTGC+CGG + chr8_1:84341675-84341694 None:intergenic 35.0%
CTTGGATTCAACCCAAAATT+AGG + chr8_1:84341708-84341727 None:intergenic 35.0%
! TTTATTGAGTTGCCAAAGCT+TGG + chr8_1:84341726-84341745 None:intergenic 35.0%
! AGCTTTGGCAACTCAATAAA+TGG - chr8_1:84341726-84341745 Msa1220940:intron 35.0%
ATTGTATTGCAACTCTGAAC+AGG + chr8_1:84341787-84341806 None:intergenic 35.0%
AGAGTTGCAATACAATAGCT+TGG - chr8_1:84341791-84341810 Msa1220940:intron 35.0%
GAGTTGCAATACAATAGCTT+GGG - chr8_1:84341792-84341811 Msa1220940:intron 35.0%
CTATTGGAGCTTCAAAGTAT+TGG - chr8_1:84341831-84341850 Msa1220940:intron 35.0%
TAGTCAAAAGTCACTGGAAT+AGG + chr8_1:84341889-84341908 None:intergenic 35.0%
CACAGTATGACCATTTAGAT+CGG - chr8_1:84342205-84342224 Msa1220940:intron 35.0%
GACAGCTTATGAGAAATACA+CGG - chr8_1:84342528-84342547 Msa1220940:CDS 35.0%
GAGACATATCAAAGTGTGAA+AGG - chr8_1:84342828-84342847 Msa1220940:CDS 35.0%
! AATGTTGGACGATTTTCCTA+AGG + chr8_1:84343087-84343106 None:intergenic 35.0%
TTGTTACAACTGCAACACTA+AGG + chr8_1:84343218-84343237 None:intergenic 35.0%
TTAGTGTTGCAGTTGTAACA+AGG - chr8_1:84343217-84343236 Msa1220940:CDS 35.0%
!! GCAATACAGGGCATTTTATA+GGG + chr8_1:84343247-84343266 None:intergenic 35.0%
!! TGCAATACAGGGCATTTTAT+AGG + chr8_1:84343248-84343267 None:intergenic 35.0%
AATTACGTCATATGTCAGAG+TGG - chr8_1:84343269-84343288 Msa1220940:CDS 35.0%
! GGCATTTGTTAAATGGACAT+TGG - chr8_1:84343380-84343399 Msa1220940:CDS 35.0%
TACCACCAATTTGAAGATAC+AGG - chr8_1:84343408-84343427 Msa1220940:CDS 35.0%
TCTTGCCTGTATCTTCAAAT+TGG + chr8_1:84343416-84343435 None:intergenic 35.0%
TTTCCTAACAATGCTATGCT+GGG + chr8_1:84343487-84343506 None:intergenic 35.0%
ATTTCCTAACAATGCTATGC+TGG + chr8_1:84343488-84343507 None:intergenic 35.0%
AGCATTGTTAGGAAATCAGA+TGG - chr8_1:84343492-84343511 Msa1220940:CDS 35.0%
TGTTAGGAAATCAGATGGAT+TGG - chr8_1:84343497-84343516 Msa1220940:CDS 35.0%
CCAGAAATTAATGAAGAACC+TGG + chr8_1:84343573-84343592 None:intergenic 35.0%
CCAGGTTCTTCATTAATTTC+TGG - chr8_1:84343570-84343589 Msa1220940:CDS 35.0%
ATGCTGACACAACAGATATA+TGG + chr8_1:84343623-84343642 None:intergenic 35.0%
AAAATCTAGTGTGTGCTGAA+AGG + chr8_1:84343699-84343718 None:intergenic 35.0%
!! ATGAAGATTTCTGGTCAAAC+AGG - chr8_1:84343871-84343890 Msa1220940:intron 35.0%
!! TGAAGATTTCTGGTCAAACA+GGG - chr8_1:84343872-84343891 Msa1220940:intron 35.0%
!! GAATTGTTCCTTGATGATGT+CGG - chr8_1:84343906-84343925 Msa1220940:intron 35.0%
!! AATTGTTCCTTGATGATGTC+GGG - chr8_1:84343907-84343926 Msa1220940:intron 35.0%
TCAAGGTAATTCAAGTACTC+CGG - chr8_1:84343935-84343954 Msa1220940:intron 35.0%
! TTTGTAGTTCCATTTCTGGA+TGG + chr8_1:84344044-84344063 None:intergenic 35.0%
! AGCTTTTGTAGTTCCATTTC+TGG + chr8_1:84344048-84344067 None:intergenic 35.0%
AGAAATGGAACTACAAAAGC+TGG - chr8_1:84344047-84344066 Msa1220940:CDS 35.0%
!!! TTTCTGCTTAGGCTTTGTTT+TGG + chr8_1:84344111-84344130 None:intergenic 35.0%
!! CAGCATTCTGTTTCTGTAAA+TGG - chr8_1:84344137-84344156 Msa1220940:CDS 35.0%
GCCTAGTTATAGAAATACCA+AGG - chr8_1:84344226-84344245 Msa1220940:intron 35.0%
!! TGGTTGAATATTGATGACGA+TGG - chr8_1:84344374-84344393 Msa1220940:intron 35.0%
ACAAGATCATGACGACTTTA+TGG - chr8_1:84344400-84344419 Msa1220940:intron 35.0%
CAAGATCATGACGACTTTAT+GGG - chr8_1:84344401-84344420 Msa1220940:intron 35.0%
CCATCATATTCAAGTCTGAA+AGG + chr8_1:84344448-84344467 None:intergenic 35.0%
CCTTTCAGACTTGAATATGA+TGG - chr8_1:84344445-84344464 Msa1220940:intron 35.0%
GGCTAATTCTGTCTACAATT+AGG - chr8_1:84344566-84344585 Msa1220940:CDS 35.0%
CTCTTACAAATCAGAGAACA+AGG - chr8_1:84344766-84344785 Msa1220940:CDS 35.0%
! AAGCTACGGATTGCCAATAA+TGG - chr8_1:84337690-84337709 Msa1220940:three_prime_UTR 40.0%
GAGCGAAACTTACCTATTGT+AGG - chr8_1:84337729-84337748 Msa1220940:three_prime_UTR 40.0%
! TACCTATTGTAGGTGATGGT+TGG - chr8_1:84337739-84337758 Msa1220940:three_prime_UTR 40.0%
! ACCTATTGTAGGTGATGGTT+GGG - chr8_1:84337740-84337759 Msa1220940:three_prime_UTR 40.0%
GTTTCCTGGAAACCATTAAC+AGG + chr8_1:84337840-84337859 None:intergenic 40.0%
TGGTTTCCAGGAAACTAAAC+AGG - chr8_1:84337845-84337864 Msa1220940:three_prime_UTR 40.0%
GGTTTCCAGGAAACTAAACA+GGG - chr8_1:84337846-84337865 Msa1220940:three_prime_UTR 40.0%
!! AACGACTTGCTACTGATTCT+CGG - chr8_1:84337877-84337896 Msa1220940:three_prime_UTR 40.0%
TATAGGCTGGGAGTTTCTAA+TGG - chr8_1:84338310-84338329 Msa1220940:CDS 40.0%
ATTCCCTTGTCAACGATAAG+CGG - chr8_1:84338422-84338441 Msa1220940:CDS 40.0%
TCGTTCTGTTAGTTCAGACA+AGG - chr8_1:84338447-84338466 Msa1220940:CDS 40.0%
CTGTTAGTTCAGACAAGGAT+AGG - chr8_1:84338452-84338471 Msa1220940:CDS 40.0%
TTGAGGACAAGATCTTTCCT+TGG - chr8_1:84338550-84338569 Msa1220940:CDS 40.0%
GCATGTAAAAAATGCAGCCA+AGG + chr8_1:84338570-84338589 None:intergenic 40.0%
! GTCCCATTTCTATGTGCTTT+TGG - chr8_1:84338606-84338625 Msa1220940:CDS 40.0%
! GCTCCAAAAGCACATAGAAA+TGG + chr8_1:84338612-84338631 None:intergenic 40.0%
CCTGGGCATAAAACATGATA+TGG + chr8_1:84338698-84338717 None:intergenic 40.0%
! CCATATCATGTTTTATGCCC+AGG - chr8_1:84338695-84338714 Msa1220940:CDS 40.0%
ACAGCTGTTCTATGAACAAC+CGG + chr8_1:84338829-84338848 None:intergenic 40.0%
GAACAGCTGTTCCTAATGAT+TGG - chr8_1:84338839-84338858 Msa1220940:intron 40.0%
TGAGAAAGCTCCCAATCATT+AGG + chr8_1:84338853-84338872 None:intergenic 40.0%
AGTACTATTAACACCAGCTG+GGG + chr8_1:84338890-84338909 None:intergenic 40.0%
TACTAACAATCGCAAACGTG+TGG - chr8_1:84338906-84338925 Msa1220940:CDS 40.0%
! AGGCACAAAACTTGTTCTTC+TGG + chr8_1:84338998-84339017 None:intergenic 40.0%
! GATGTGGCTGGTAATGATAT+TGG - chr8_1:84339063-84339082 Msa1220940:CDS 40.0%
! GCTGGTAATGATATTGGGTT+AGG - chr8_1:84339069-84339088 Msa1220940:CDS 40.0%
CTTTCAGATAAAGCTGACGA+AGG + chr8_1:84339156-84339175 None:intergenic 40.0%
ATCTGAAAGTGAAGAGTCTG+GGG - chr8_1:84339167-84339186 Msa1220940:intron 40.0%
GCTTTCAGATCTATCTCTTC+TGG + chr8_1:84339228-84339247 None:intergenic 40.0%
GAAGAGATAGATCTGAAAGC+TGG - chr8_1:84339228-84339247 Msa1220940:intron 40.0%
AGCTGGACAAAATGTTCCAA+AGG - chr8_1:84339245-84339264 Msa1220940:intron 40.0%
!! TGTTCCAAAGGTGTCTAACT+TGG - chr8_1:84339257-84339276 Msa1220940:intron 40.0%
GTTACCAAGTTAGACACCTT+TGG + chr8_1:84339264-84339283 None:intergenic 40.0%
!! CTTGTTTCTGGTGAAGAACT+TGG - chr8_1:84339297-84339316 Msa1220940:intron 40.0%
AAGAACTTGGAGATGGTGTT+CGG - chr8_1:84339310-84339329 Msa1220940:intron 40.0%
! CAACTAAGAAGTGCAAGACA+AGG - chr8_1:84339423-84339442 Msa1220940:intron 40.0%
TTTATGGAATCCTTGCAGCA+AGG - chr8_1:84339536-84339555 Msa1220940:intron 40.0%
AAGGAAGCTTTCTGATCGTA+AGG - chr8_1:84339575-84339594 Msa1220940:intron 40.0%
! AGTGCAGCAGCAGATTATTT+TGG - chr8_1:84339627-84339646 Msa1220940:intron 40.0%
!! GTGAAGGGTGTTATCAAATC+TGG - chr8_1:84339778-84339797 Msa1220940:intron 40.0%
GTTCCATCTGCTTCCAAAAT+GGG + chr8_1:84339905-84339924 None:intergenic 40.0%
CCGAGGAAGATATTACTTAC+TGG - chr8_1:84339943-84339962 Msa1220940:CDS 40.0%
CCGCATACAATAACACAACA+AGG + chr8_1:84340215-84340234 None:intergenic 40.0%
TATTGTATGCGGTTACTCGT+AGG - chr8_1:84340223-84340242 Msa1220940:intron 40.0%
GATTCTTGAGCAATTGCAGA+TGG + chr8_1:84340359-84340378 None:intergenic 40.0%
! AAAAAGTTGAGAGGAGTGCA+GGG + chr8_1:84340491-84340510 None:intergenic 40.0%
! AAAAAAGTTGAGAGGAGTGC+AGG + chr8_1:84340492-84340511 None:intergenic 40.0%
CTAGTGACAGTTACGTAGTT+AGG + chr8_1:84340545-84340564 None:intergenic 40.0%
TACTAGAACAGTCAATGCCT+GGG + chr8_1:84340759-84340778 None:intergenic 40.0%
TTACTAGAACAGTCAATGCC+TGG + chr8_1:84340760-84340779 None:intergenic 40.0%
! CAGTGAGTATTGTTCCATGT+TGG + chr8_1:84341080-84341099 None:intergenic 40.0%
CCATCTATGTTTGAAGGAAC+CGG + chr8_1:84341324-84341343 None:intergenic 40.0%
ACCATGTTATGATCTCCCTT+GGG + chr8_1:84341450-84341469 None:intergenic 40.0%
TACCATGTTATGATCTCCCT+TGG + chr8_1:84341451-84341470 None:intergenic 40.0%
!! TTTGGGTTGAATCCAAGCTT+TGG - chr8_1:84341711-84341730 Msa1220940:intron 40.0%
!! GTAAGCTTACCACTGATTCA+AGG + chr8_1:84341863-84341882 None:intergenic 40.0%
AGAAGAGGATGAAGCCATAT+CGG - chr8_1:84342057-84342076 Msa1220940:intron 40.0%
CCTAGTAATATCCTCCGATA+TGG + chr8_1:84342074-84342093 None:intergenic 40.0%
CCATATCGGAGGATATTACT+AGG - chr8_1:84342071-84342090 Msa1220940:intron 40.0%
TCGGAGGATATTACTAGGTT+AGG - chr8_1:84342076-84342095 Msa1220940:intron 40.0%
AAAAATAGTTACGGGGGTAG+GGG + chr8_1:84342169-84342188 None:intergenic 40.0%
CAAAAATAGTTACGGGGGTA+GGG + chr8_1:84342170-84342189 None:intergenic 40.0%
ACAAAAATAGTTACGGGGGT+AGG + chr8_1:84342171-84342190 None:intergenic 40.0%
ATTTAGATCGGTTGTAGAGC+CGG - chr8_1:84342217-84342236 Msa1220940:intron 40.0%
CATAAGCTGTCACAACAAGT+TGG + chr8_1:84342519-84342538 None:intergenic 40.0%
!!! TCAGGTCTTTTTTCTGAGTG+CGG - chr8_1:84342798-84342817 Msa1220940:intron 40.0%
GACTTTGCTAACAGAAACGT+GGG + chr8_1:84343161-84343180 None:intergenic 40.0%
AGACTTTGCTAACAGAAACG+TGG + chr8_1:84343162-84343181 None:intergenic 40.0%
AGAGAACTAGATCACAAGCT+AGG - chr8_1:84343190-84343209 Msa1220940:CDS 40.0%
ATTAATTGACAGGCTTGTCG+AGG - chr8_1:84343303-84343322 Msa1220940:CDS 40.0%
! CTGCACTGGCATTTGTTAAA+TGG - chr8_1:84343373-84343392 Msa1220940:CDS 40.0%
TGCCTGTATCTTCAAATTGG+TGG + chr8_1:84343413-84343432 None:intergenic 40.0%
TTTCAGCGAGCCTTTATTCA+AGG - chr8_1:84343440-84343459 Msa1220940:CDS 40.0%
!! TAGGAAATCAGATGGATTGG+AGG - chr8_1:84343500-84343519 Msa1220940:CDS 40.0%
! TTTTCTTTCTGCAGCTTCCA+TGG - chr8_1:84343740-84343759 Msa1220940:intron 40.0%
TTTCTTTCTGCAGCTTCCAT+GGG - chr8_1:84343741-84343760 Msa1220940:intron 40.0%
AATTCATCTGAGCAAACCAG+TGG - chr8_1:84343846-84343865 Msa1220940:intron 40.0%
CCAGAAATCTTCATTTCCAC+TGG + chr8_1:84343865-84343884 None:intergenic 40.0%
CCAGTGGAAATGAAGATTTC+TGG - chr8_1:84343862-84343881 Msa1220940:intron 40.0%
!! ATTGTTCCTTGATGATGTCG+GGG - chr8_1:84343908-84343927 Msa1220940:intron 40.0%
CAAGGTAATTCAAGTACTCC+GGG - chr8_1:84343936-84343955 Msa1220940:intron 40.0%
AAGGTAATTCAAGTACTCCG+GGG - chr8_1:84343937-84343956 Msa1220940:intron 40.0%
TCTCTAACAAGCAGCACAAA+AGG - chr8_1:84343969-84343988 Msa1220940:intron 40.0%
CAAGCATCATCAAGTGCTAA+AGG - chr8_1:84344074-84344093 Msa1220940:CDS 40.0%
! TTTGAAACAGAAGGCAATGC+CGG + chr8_1:84344194-84344213 None:intergenic 40.0%
!! TCGGTAGACTTTGAAACAGA+AGG + chr8_1:84344203-84344222 None:intergenic 40.0%
ACCAAGGAAAAGGATGAGTT+TGG - chr8_1:84344242-84344261 Msa1220940:intron 40.0%
! GAAAAGGATGAGTTTGGCTT+GGG - chr8_1:84344248-84344267 Msa1220940:intron 40.0%
TGGAGGTTGGACAAATCAAT+TGG + chr8_1:84344287-84344306 None:intergenic 40.0%
ATGGTCAAGATCTTGGTTCA+TGG - chr8_1:84344354-84344373 Msa1220940:intron 40.0%
AAGTCTGAAAGGTCATCCAT+GGG + chr8_1:84344437-84344456 None:intergenic 40.0%
TCTCTATCAACAGTCCCTGA+TGG + chr8_1:84337663-84337682 None:intergenic 45.0%
TCCCAACCATCACCTACAAT+AGG + chr8_1:84337744-84337763 None:intergenic 45.0%
! GCATTCCCTGTTTAGTTTCC+TGG + chr8_1:84337854-84337873 None:intergenic 45.0%
GTTGCAGCTAGCAAATCAGA+TGG - chr8_1:84338337-84338356 Msa1220940:CDS 45.0%
ATGGAATCTCTCAGCAGACT+GGG - chr8_1:84338356-84338375 Msa1220940:CDS 45.0%
TTCCCTTGTCAACGATAAGC+GGG - chr8_1:84338423-84338442 Msa1220940:CDS 45.0%
TGAACAACCGGTGACATCTT+GGG + chr8_1:84338817-84338836 None:intergenic 45.0%
ATGAACAACCGGTGACATCT+TGG + chr8_1:84338818-84338837 None:intergenic 45.0%
GTACTATTAACACCAGCTGG+GGG + chr8_1:84338889-84338908 None:intergenic 45.0%
CACATCAGAAACAGCATCCA+CGG + chr8_1:84339049-84339068 None:intergenic 45.0%
GATAAAGCTGACGAAGGTGA+AGG + chr8_1:84339150-84339169 None:intergenic 45.0%
! GGTTTCCTGCCCTTTTCTTT+TGG + chr8_1:84339207-84339226 None:intergenic 45.0%
TCTGGTGAAGAACTTGGAGA+TGG - chr8_1:84339303-84339322 Msa1220940:intron 45.0%
CCAAGCTTCTCAGATGTCAT+TGG + chr8_1:84339384-84339403 None:intergenic 45.0%
CCAATGACATCTGAGAAGCT+TGG - chr8_1:84339381-84339400 Msa1220940:intron 45.0%
CACATGAGCCGAAGTCTTTA+AGG - chr8_1:84339511-84339530 Msa1220940:intron 45.0%
TCAGAAAGCTTCCTTGTTGG+TGG + chr8_1:84339570-84339589 None:intergenic 45.0%
CGATCAGAAAGCTTCCTTGT+TGG + chr8_1:84339573-84339592 None:intergenic 45.0%
! AGTAGGCTTTTGACGAGCAT+AGG + chr8_1:84339601-84339620 None:intergenic 45.0%
ATAATCTGCTGCTGCACTGA+TGG + chr8_1:84339625-84339644 None:intergenic 45.0%
GGTTTAGTTGGGTCAGTAGA+TGG - chr8_1:84339733-84339752 Msa1220940:intron 45.0%
! GAGTTATTGGCTGCTGTGAA+GGG - chr8_1:84339763-84339782 Msa1220940:intron 45.0%
GGTTCCATCTGCTTCCAAAA+TGG + chr8_1:84339906-84339925 None:intergenic 45.0%
CTTAGTCACGACACTTCCAT+AGG - chr8_1:84340062-84340081 Msa1220940:intron 45.0%
TCTCAATTCCAGGATTGCAG+AGG - chr8_1:84340429-84340448 Msa1220940:intron 45.0%
CTCAATTCCAGGATTGCAGA+GGG - chr8_1:84340430-84340449 Msa1220940:intron 45.0%
ATTGCAGAATAATGCAGCCC+AGG - chr8_1:84340739-84340758 Msa1220940:CDS 45.0%
ATGTTTGAAGGAACCGGAGT+TGG + chr8_1:84341318-84341337 None:intergenic 45.0%
CCGGTTCCTTCAAACATAGA+TGG - chr8_1:84341321-84341340 Msa1220940:intron 45.0%
TTGGCTGTGAAAGAGATGTC+AGG - chr8_1:84341376-84341395 Msa1220940:intron 45.0%
AGAAAAGTTACCACTGCCCA+AGG - chr8_1:84341431-84341450 Msa1220940:intron 45.0%
GAAAAGTTACCACTGCCCAA+GGG - chr8_1:84341432-84341451 Msa1220940:intron 45.0%
GCTATAAGTCGTTGACAGAG+AGG + chr8_1:84341474-84341493 None:intergenic 45.0%
TGGACTTGACCTTGAATCAG+TGG - chr8_1:84341851-84341870 Msa1220940:intron 45.0%
TCCTCTTCTTGCACCATTTC+AGG + chr8_1:84342046-84342065 None:intergenic 45.0%
GCATCAATTGTACCTGTCCT+TGG + chr8_1:84342111-84342130 None:intergenic 45.0%
AAAATAGTTACGGGGGTAGG+GGG + chr8_1:84342168-84342187 None:intergenic 45.0%
GGCTCTACAACCGATCTAAA+TGG + chr8_1:84342218-84342237 None:intergenic 45.0%
TTTAGATCGGTTGTAGAGCC+GGG - chr8_1:84342218-84342237 Msa1220940:intron 45.0%
!!! TTAGTTTTACCCCGAACCTC+TGG - chr8_1:84342631-84342650 Msa1220940:intron 45.0%
!! TAGTTTTACCCCGAACCTCT+GGG - chr8_1:84342632-84342651 Msa1220940:intron 45.0%
TGGGTAGTGATTTCAGAGTG+AGG - chr8_1:84342750-84342769 Msa1220940:intron 45.0%
GGGTAGTGATTTCAGAGTGA+GGG - chr8_1:84342751-84342770 Msa1220940:intron 45.0%
CAATGACAGAGAGACCAAAC+AGG + chr8_1:84342777-84342796 None:intergenic 45.0%
TGGTCTCTCTGTCATTGTTC+AGG - chr8_1:84342780-84342799 Msa1220940:intron 45.0%
!! CGACAGTTTTAGCCCATTCT+TGG - chr8_1:84342997-84343016 Msa1220940:intron 45.0%
GGGACTTCATCATCACACAA+TGG + chr8_1:84343141-84343160 None:intergenic 45.0%
TATGCTGGGAAGAAGCAGTT+AGG + chr8_1:84343473-84343492 None:intergenic 45.0%
CTTCCCAGCATAGCATTGTT+AGG - chr8_1:84343481-84343500 Msa1220940:CDS 45.0%
! AGAGACAGAGGAGAAGCATA+TGG + chr8_1:84343540-84343559 None:intergenic 45.0%
ATATGCTTCTCCTCTGTCTC+TGG - chr8_1:84343539-84343558 Msa1220940:CDS 45.0%
TGTGTGCTGAAAGGAGCAAA+AGG + chr8_1:84343690-84343709 None:intergenic 45.0%
!! TGAGAAATTGGTGATGGGCT+CGG + chr8_1:84343774-84343793 None:intergenic 45.0%
!! TTGTTCCTTGATGATGTCGG+GGG - chr8_1:84343909-84343928 Msa1220940:intron 45.0%
AATTCAAGTACTCCGGGGAT+TGG - chr8_1:84343942-84343961 Msa1220940:intron 45.0%
GTTAGAGAACTTCCAATCCC+CGG + chr8_1:84343957-84343976 None:intergenic 45.0%
CAAGCAGCACAAAAGGAAAG+AGG - chr8_1:84343976-84343995 Msa1220940:CDS 45.0%
AAAAGGAAAGAGGAGCGAGA+GGG - chr8_1:84343986-84344005 Msa1220940:CDS 45.0%
!! AGAGAGGTACCATCCAGAAA+TGG - chr8_1:84344032-84344051 Msa1220940:CDS 45.0%
! TGCTGAGTTGCTTTCTGCTT+AGG + chr8_1:84344122-84344141 None:intergenic 45.0%
GTTTCTGTAAATGGCCTCCT+TGG - chr8_1:84344146-84344165 Msa1220940:intron 45.0%
! GCCAAACTCATCCTTTTCCT+TGG + chr8_1:84344246-84344265 None:intergenic 45.0%
GGAAAAGGATGAGTTTGGCT+TGG - chr8_1:84344247-84344266 Msa1220940:intron 45.0%
GATCTTGACCATTGTCAGCA+AGG + chr8_1:84344346-84344365 None:intergenic 45.0%
GCTGACAATGGTCAAGATCT+TGG - chr8_1:84344347-84344366 Msa1220940:intron 45.0%
TATGGGCCTTGAAATTCCCA+TGG - chr8_1:84344418-84344437 Msa1220940:intron 45.0%
GGTCATCCATGGGAATTTCA+AGG + chr8_1:84344427-84344446 None:intergenic 45.0%
CAAGTCTGAAAGGTCATCCA+TGG + chr8_1:84344438-84344457 None:intergenic 45.0%
CGTCACTCGAAAACAACACT+TGG + chr8_1:84344622-84344641 None:intergenic 45.0%
!!! TTATATTTTTTTATTAAAAG+GGG - chr8_1:84342709-84342728 Msa1220940:CDS 5.0%
TACGCACCAATTCTCTCGTC+AGG - chr8_1:84337637-84337656 Msa1220940:three_prime_UTR 50.0%
TGATGGCCTGACGAGAGAAT+TGG + chr8_1:84337646-84337665 None:intergenic 50.0%
AATTCTCTCGTCAGGCCATC+AGG - chr8_1:84337645-84337664 Msa1220940:three_prime_UTR 50.0%
ATTCTCTCGTCAGGCCATCA+GGG - chr8_1:84337646-84337665 Msa1220940:three_prime_UTR 50.0%
GATGGAATCTCTCAGCAGAC+TGG - chr8_1:84338355-84338374 Msa1220940:CDS 50.0%
AATCTCTCAGCAGACTGGGT+TGG - chr8_1:84338360-84338379 Msa1220940:CDS 50.0%
ATCTCTCAGCAGACTGGGTT+GGG - chr8_1:84338361-84338380 Msa1220940:CDS 50.0%
CGTACCCCTACCCATAGAAA+CGG - chr8_1:84338388-84338407 Msa1220940:CDS 50.0%
TTGGCCGTTTCTATGGGTAG+GGG + chr8_1:84338395-84338414 None:intergenic 50.0%
CTTGGCCGTTTCTATGGGTA+GGG + chr8_1:84338396-84338415 None:intergenic 50.0%
TCTTGGCCGTTTCTATGGGT+AGG + chr8_1:84338397-84338416 None:intergenic 50.0%
TCCCTTGTCAACGATAAGCG+GGG - chr8_1:84338424-84338443 Msa1220940:CDS 50.0%
ACCCCGCTTATCGTTGACAA+GGG + chr8_1:84338428-84338447 None:intergenic 50.0%
AAAATGGGAGCCACAGCTTG+CGG + chr8_1:84338508-84338527 None:intergenic 50.0%
ATACTGCTATTCGGGCTCCA+CGG - chr8_1:84338773-84338792 Msa1220940:intron 50.0%
AACAACCGGTGACATCTTGG+GGG + chr8_1:84338815-84338834 None:intergenic 50.0%
GAACAACCGGTGACATCTTG+GGG + chr8_1:84338816-84338835 None:intergenic 50.0%
TAATGATGAAGCTCCTGCCG+TGG - chr8_1:84339029-84339048 Msa1220940:CDS 50.0%
!! CGTGGATGCTGTTTCTGATG+TGG - chr8_1:84339047-84339066 Msa1220940:CDS 50.0%
!! GATGCTGTTTCTGATGTGGC+TGG - chr8_1:84339051-84339070 Msa1220940:CDS 50.0%
TGAAAGTGAAGAGTCTGGGG+TGG - chr8_1:84339170-84339189 Msa1220940:intron 50.0%
AACTTGGAGATGGTGTTCGG+AGG - chr8_1:84339313-84339332 Msa1220940:intron 50.0%
TCTCAATGCCACAAGGTCAC+TGG - chr8_1:84339356-84339375 Msa1220940:intron 50.0%
TGGAATCCTTGCAGCAAGGT+CGG - chr8_1:84339540-84339559 Msa1220940:intron 50.0%
GTTGGGTCAGTAGATGGACA+CGG - chr8_1:84339739-84339758 Msa1220940:intron 50.0%
TTGGGTCAGTAGATGGACAC+GGG - chr8_1:84339740-84339759 Msa1220940:intron 50.0%
AGATGGACACGGGGAGTTAT+TGG - chr8_1:84339750-84339769 Msa1220940:intron 50.0%
! GGAGTTATTGGCTGCTGTGA+AGG - chr8_1:84339762-84339781 Msa1220940:intron 50.0%
!! AAATGGGCTGGAGAAGGAGT+AGG + chr8_1:84339889-84339908 None:intergenic 50.0%
! ACTCCTTCTCCAGCCCATTT+TGG - chr8_1:84339889-84339908 Msa1220940:intron 50.0%
!! CTTCCAAAATGGGCTGGAGA+AGG + chr8_1:84339895-84339914 None:intergenic 50.0%
CATCTGCTTCCAAAATGGGC+TGG + chr8_1:84339901-84339920 None:intergenic 50.0%
!! CAGCCCATTTTGGAAGCAGA+TGG - chr8_1:84339899-84339918 Msa1220940:intron 50.0%
GTCTTAGGCTGCACTGCTAT+AGG - chr8_1:84340300-84340319 Msa1220940:intron 50.0%
GGCTGCACTGCTATAGGAAT+TGG - chr8_1:84340306-84340325 Msa1220940:intron 50.0%
AATTCCAGGATTGCAGAGGG+TGG - chr8_1:84340433-84340452 Msa1220940:intron 50.0%
AAGCACTCTGACTCCAACTC+CGG - chr8_1:84341302-84341321 Msa1220940:intron 50.0%
TTATGATCTCCCTTGGGCAG+TGG + chr8_1:84341444-84341463 None:intergenic 50.0%
GCCCAAGGGAGATCATAACA+TGG - chr8_1:84341446-84341465 Msa1220940:intron 50.0%
TCAGAAGAAGATCGTAGCGG+TGG - chr8_1:84341504-84341523 Msa1220940:intron 50.0%
GCCTGAAATGGTGCAAGAAG+AGG - chr8_1:84342042-84342061 Msa1220940:intron 50.0%
AGAGGATGAAGCCATATCGG+AGG - chr8_1:84342060-84342079 Msa1220940:intron 50.0%
AGGTTAGGCGAGCTTTACCA+AGG - chr8_1:84342091-84342110 Msa1220940:intron 50.0%
TTAGATCGGTTGTAGAGCCG+GGG - chr8_1:84342219-84342238 Msa1220940:intron 50.0%
AGATCTTCAGCCCAGAGGTT+CGG + chr8_1:84342645-84342664 None:intergenic 50.0%
TAGCTAGATCTTCAGCCCAG+AGG + chr8_1:84342650-84342669 None:intergenic 50.0%
TTTCAGAGTGAGGGCCTGTT+TGG - chr8_1:84342760-84342779 Msa1220940:intron 50.0%
AATGGTCAAGCAAGCTGCAC+TGG - chr8_1:84343359-84343378 Msa1220940:CDS 50.0%
CAAAAGGAAAGAGGAGCGAG+AGG - chr8_1:84343985-84344004 Msa1220940:CDS 50.0%
GAGAGGGAGAGAGATGGAAA+GGG - chr8_1:84344002-84344021 Msa1220940:CDS 50.0%
GAGAGAGATGGAAAGGGACA+CGG - chr8_1:84344008-84344027 Msa1220940:CDS 50.0%
GTTGCCAGAGCAACCAAAAC+CGG - chr8_1:84344172-84344191 Msa1220940:intron 50.0%
!!! AATGCCGGTTTTGGTTGCTC+TGG + chr8_1:84344179-84344198 None:intergenic 50.0%
!!! ACAGAAGGCAATGCCGGTTT+TGG + chr8_1:84344188-84344207 None:intergenic 50.0%
!! AAGGATGAGTTTGGCTTGGG+TGG - chr8_1:84344251-84344270 Msa1220940:intron 50.0%
!! TGAGTTTGGCTTGGGTGGAT+TGG - chr8_1:84344256-84344275 Msa1220940:intron 50.0%
ACCATTGTCAGCAAGGTCAC+CGG + chr8_1:84344339-84344358 None:intergenic 50.0%
GACCCCGCTTATCGTTGACA+AGG + chr8_1:84338429-84338448 None:intergenic 55.0%
AAATGGGAGCCACAGCTTGC+GGG + chr8_1:84338507-84338526 None:intergenic 55.0%
TCGTCACGAACAGTTGCCCT+GGG + chr8_1:84338715-84338734 None:intergenic 55.0%
TTCGTCACGAACAGTTGCCC+TGG + chr8_1:84338716-84338735 None:intergenic 55.0%
AGTTGCCCCCAAGATGTCAC+CGG - chr8_1:84338807-84338826 Msa1220940:intron 55.0%
! AACACCAGCTGGGGGTTTTG+TGG + chr8_1:84338881-84338900 None:intergenic 55.0%
! TCTTTTGTGGCCTCTGCCAG+GGG + chr8_1:84338963-84338982 None:intergenic 55.0%
! CTCTTTTGTGGCCTCTGCCA+GGG + chr8_1:84338964-84338983 None:intergenic 55.0%
! GCAGTGCGAGAGCTCTTTTG+TGG + chr8_1:84338976-84338995 None:intergenic 55.0%
TCAGAAACAGCATCCACGGC+AGG + chr8_1:84339045-84339064 None:intergenic 55.0%
GGATTCGTGAGACGTTCAGC+TGG - chr8_1:84339090-84339109 Msa1220940:CDS 55.0%
!! CATTGGTGCCAGTGACCTTG+TGG + chr8_1:84339367-84339386 None:intergenic 55.0%
TGGGTCAGTAGATGGACACG+GGG - chr8_1:84339741-84339760 Msa1220940:intron 55.0%
! GTTGAGAGGAGTGCAGGGTA+CGG + chr8_1:84340486-84340505 None:intergenic 55.0%
AGGCGAGCTTTACCAAGGAC+AGG - chr8_1:84342096-84342115 Msa1220940:intron 55.0%
ATCTTCAGCCCAGAGGTTCG+GGG + chr8_1:84342643-84342662 None:intergenic 55.0%
GATCTTCAGCCCAGAGGTTC+GGG + chr8_1:84342644-84342663 None:intergenic 55.0%
!! GGTGTTGCTTCCAGAGACAG+AGG + chr8_1:84343552-84343571 None:intergenic 55.0%
! CTGTCTCTGGAAGCAACACC+AGG - chr8_1:84343552-84343571 Msa1220940:CDS 55.0%
GAGTACCCCCGACATCATCA+AGG + chr8_1:84343917-84343936 None:intergenic 55.0%
!! GATGATGTCGGGGGTACTCA+AGG - chr8_1:84343918-84343937 Msa1220940:intron 55.0%
CGAGAGGGAGAGAGATGGAA+AGG - chr8_1:84344001-84344020 Msa1220940:CDS 55.0%
GTTGCTCTGGCAACTTGCCA+AGG + chr8_1:84344166-84344185 None:intergenic 55.0%
CCATTGTCAGCAAGGTCACC+GGG + chr8_1:84344338-84344357 None:intergenic 55.0%
CAAGTAAGCCCCGCAAGCTG+TGG - chr8_1:84338495-84338514 Msa1220940:CDS 60.0%
AATGGGAGCCACAGCTTGCG+GGG + chr8_1:84338506-84338525 None:intergenic 60.0%
GCAACTCCTGAACCTGACCG+TGG + chr8_1:84338793-84338812 None:intergenic 60.0%
TGCACCACAAAACCCCCAGC+TGG - chr8_1:84338874-84338893 Msa1220940:intron 60.0%
! GCTCTTTTGTGGCCTCTGCC+AGG + chr8_1:84338965-84338984 None:intergenic 60.0%
! TGAAGAGTCTGGGGTGGCTG+AGG - chr8_1:84339176-84339195 Msa1220940:intron 60.0%
GGAGATGGTGTTCGGAGGCA+AGG - chr8_1:84339318-84339337 Msa1220940:intron 60.0%
ATGGTGTTCGGAGGCAAGGC+AGG - chr8_1:84339322-84339341 Msa1220940:intron 60.0%
TGTTCGGAGGCAAGGCAGGA+CGG - chr8_1:84339326-84339345 Msa1220940:intron 60.0%
GGCGCAGTCTCAATGCCACA+AGG - chr8_1:84339349-84339368 Msa1220940:intron 60.0%
AGGTCGGTCGTCCACCAACA+AGG - chr8_1:84339556-84339575 Msa1220940:intron 60.0%
! GCTGCTGCACTGATGGCAGT+AGG + chr8_1:84339618-84339637 None:intergenic 60.0%
GGAACCACCCTCTGCAATCC+TGG + chr8_1:84340440-84340459 None:intergenic 60.0%
GCTTGTCGAGGTGCATCGAG+TGG - chr8_1:84343315-84343334 Msa1220940:CDS 60.0%
AGGAGCGAGAGGGAGAGAGA+TGG - chr8_1:84343996-84344015 Msa1220940:CDS 60.0%
TGGAAAGGGACACGGCAGAG+AGG - chr8_1:84344016-84344035 Msa1220940:CDS 60.0%
GCTCTGGCAACTTGCCAAGG+AGG + chr8_1:84344163-84344182 None:intergenic 60.0%
TTGTCCAACCTCCAGCTGCC+TGG - chr8_1:84344293-84344312 Msa1220940:intron 60.0%
CATTCCAGGCAGCTGGAGGT+TGG + chr8_1:84344300-84344319 None:intergenic 60.0%
CAACCTCCAGCTGCCTGGAA+TGG - chr8_1:84344298-84344317 Msa1220940:intron 60.0%
CTGCCTGGAATGGACGTGCT+CGG - chr8_1:84344308-84344327 Msa1220940:intron 60.0%
CCCGGTGACCTTGCTGACAA+TGG - chr8_1:84344335-84344354 Msa1220940:intron 60.0%
GCTATTCGGGCTCCACGGTC+AGG - chr8_1:84338778-84338797 Msa1220940:intron 65.0%
TGGCCTCTGCCAGGGGACAA+CGG + chr8_1:84338956-84338975 None:intergenic 65.0%
GTTCGGAGGCAAGGCAGGAC+GGG - chr8_1:84339327-84339346 Msa1220940:intron 65.0%
TTCGGAGGCAAGGCAGGACG+GGG - chr8_1:84339328-84339347 Msa1220940:intron 65.0%
GGACGACCGACCTTGCTGCA+AGG + chr8_1:84339549-84339568 None:intergenic 65.0%
TGGGCTCGGCTGTGAACCCA+TGG + chr8_1:84343760-84343779 None:intergenic 65.0%
CGTCCATTCCAGGCAGCTGG+AGG + chr8_1:84344304-84344323 None:intergenic 65.0%
GCACGTCCATTCCAGGCAGC+TGG + chr8_1:84344307-84344326 None:intergenic 65.0%
TCGCCGAGCACGTCCATTCC+AGG + chr8_1:84344314-84344333 None:intergenic 65.0%
ATGGACGTGCTCGGCGATCC+CGG - chr8_1:84344317-84344336 Msa1220940:intron 65.0%
CGGGCTCCACGGTCAGGTTC+AGG - chr8_1:84338784-84338803 Msa1220940:intron 70.0%
TCTGCCAGGGGACAACGGGC+GGG + chr8_1:84338951-84338970 None:intergenic 70.0%
CTCTGCCAGGGGACAACGGG+CGG + chr8_1:84338952-84338971 None:intergenic 70.0%
GGCCTCTGCCAGGGGACAAC+GGG + chr8_1:84338955-84338974 None:intergenic 70.0%
CTTCCCCGCCCGTTGTCCCC+TGG - chr8_1:84338944-84338963 Msa1220940:CDS 75.0%
CTGCCAGGGGACAACGGGCG+GGG + chr8_1:84338950-84338969 None:intergenic 75.0%
CGCCCGTTGTCCCCTGGCAG+AGG - chr8_1:84338950-84338969 Msa1220940:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 84337630 84344842 84337630 ID=Msa1220940;Name=Msa1220940
chr8_1 mRNA 84337630 84344842 84337630 ID=Msa1220940-mRNA-1;Parent=Msa1220940;Name=Msa1220940-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.83|0.84|1|1|1|13|370|1107
chr8_1 exon 84337630 84338718 84337630 ID=Msa1220940-mRNA-1:exon:30286;Parent=Msa1220940-mRNA-1
chr8_1 exon 84338899 84339157 84338899 ID=Msa1220940-mRNA-1:exon:30285;Parent=Msa1220940-mRNA-1
chr8_1 exon 84339923 84339980 84339923 ID=Msa1220940-mRNA-1:exon:30284;Parent=Msa1220940-mRNA-1
chr8_1 exon 84340069 84340139 84340069 ID=Msa1220940-mRNA-1:exon:30283;Parent=Msa1220940-mRNA-1
chr8_1 exon 84340355 84340429 84340355 ID=Msa1220940-mRNA-1:exon:30282;Parent=Msa1220940-mRNA-1
chr8_1 exon 84340600 84341184 84340600 ID=Msa1220940-mRNA-1:exon:30281;Parent=Msa1220940-mRNA-1
chr8_1 exon 84341988 84342053 84341988 ID=Msa1220940-mRNA-1:exon:30280;Parent=Msa1220940-mRNA-1
chr8_1 exon 84342498 84342586 84342498 ID=Msa1220940-mRNA-1:exon:30279;Parent=Msa1220940-mRNA-1
chr8_1 exon 84342673 84342732 84342673 ID=Msa1220940-mRNA-1:exon:30278;Parent=Msa1220940-mRNA-1
chr8_1 exon 84342824 84342918 84342824 ID=Msa1220940-mRNA-1:exon:30277;Parent=Msa1220940-mRNA-1
chr8_1 exon 84343009 84343755 84343009 ID=Msa1220940-mRNA-1:exon:30276;Parent=Msa1220940-mRNA-1
chr8_1 exon 84343975 84344157 84343975 ID=Msa1220940-mRNA-1:exon:30275;Parent=Msa1220940-mRNA-1
chr8_1 exon 84344526 84344842 84344526 ID=Msa1220940-mRNA-1:exon:30274;Parent=Msa1220940-mRNA-1
chr8_1 CDS 84344526 84344842 84344526 ID=Msa1220940-mRNA-1:cds;Parent=Msa1220940-mRNA-1
chr8_1 CDS 84343975 84344157 84343975 ID=Msa1220940-mRNA-1:cds;Parent=Msa1220940-mRNA-1
chr8_1 CDS 84343009 84343755 84343009 ID=Msa1220940-mRNA-1:cds;Parent=Msa1220940-mRNA-1
chr8_1 CDS 84342824 84342918 84342824 ID=Msa1220940-mRNA-1:cds;Parent=Msa1220940-mRNA-1
chr8_1 CDS 84342673 84342732 84342673 ID=Msa1220940-mRNA-1:cds;Parent=Msa1220940-mRNA-1
chr8_1 CDS 84342498 84342586 84342498 ID=Msa1220940-mRNA-1:cds;Parent=Msa1220940-mRNA-1
chr8_1 CDS 84341988 84342053 84341988 ID=Msa1220940-mRNA-1:cds;Parent=Msa1220940-mRNA-1
chr8_1 CDS 84340600 84341184 84340600 ID=Msa1220940-mRNA-1:cds;Parent=Msa1220940-mRNA-1
chr8_1 CDS 84340355 84340429 84340355 ID=Msa1220940-mRNA-1:cds;Parent=Msa1220940-mRNA-1
chr8_1 CDS 84340069 84340139 84340069 ID=Msa1220940-mRNA-1:cds;Parent=Msa1220940-mRNA-1
chr8_1 CDS 84339923 84339980 84339923 ID=Msa1220940-mRNA-1:cds;Parent=Msa1220940-mRNA-1
chr8_1 CDS 84338899 84339157 84338899 ID=Msa1220940-mRNA-1:cds;Parent=Msa1220940-mRNA-1
chr8_1 CDS 84338000 84338718 84338000 ID=Msa1220940-mRNA-1:cds;Parent=Msa1220940-mRNA-1
chr8_1 three_prime_UTR 84337630 84337999 84337630 ID=Msa1220940-mRNA-1:three_prime_utr;Parent=Msa1220940-mRNA-1
Gene Sequence

>Msa1220940

ATGGATGTACGCACCAATTCTCTCGTCAGGCCATCAGGGACTGTTGATAGAGATAAAGAAAAGCTACGGATTGCCAATAATGGTGTAATTCAGAGTGAAGAGCGAAACTTACCTATTGTAGGTGATGGTTGGGAAACGTCAAAAATGAAGAAGAAGAAGCGTTCATGCATCAAATTAGATGTTTCTCCAAGTACTACATTGAATAAACCTGTTAATGGTTTCCAGGAAACTAAACAGGGAATGCAACAACGACTTGCTACTGATTCTCGGTCGAAATTGAGTAACGATTCTAATTCTTTTAGGTATGGAAGTATTGGGCTGGGAGTTTCTAATGGAACTGTTGCAGCTAGCAAATCAGATGGAATCTCTCAGCAGACTGGGTTGGGTATACGTACCCCTACCCATAGAAACGGCCAAGATAATAATTCCCTTGTCAACGATAAGCGGGGTCGTTCTGTTAGTTCAGACAAGGATAGGGTGAACTTCAGAGCTGTTAACAAGGCAACTGTTCGTGACGAATTCAATTCAGCTAGCCCTACCTCAAGTGCTAAAATGAATACTGCTATTCGGGCTCCACGGTCAGGTTCAGGAGTTGCCCCCAAGATGTCACCGGTTGTTCATAGAACAGCTGTTCCTAATGATTGGGAGCTTTCTCATTGCACCACAAAACCCCCAGCTGGTGTTAATAGTACTAACAATCGCAAACGTGTGGCATCAGCACAGTCATCTTCCCCGCCCGTTGTCCCCTGGCAGAGGCCACAAAAGAGCTCTCGCACTGCCAGAAGAACAAGTTTTGTGCCTGTTGTTTCAAGTAATGATGAAGCTCCTGCCGTGGATGCTGTTTCTGATGTGGCTGGTAATGATATTGGGTTAGGATTCGTGAGACGTTCAGCTGGCAGTTCTCCTCAGCAAATTAGATTAAAAGGTGAACCTTCACCTTCGTCAGCTTTATCTGAAAGTGAAGAGTCTGGGGTGGCTGAGGTTAAACCAAAAGAAAAGGGCAGGAAACCAGAAGAGATAGATCTGAAAGCTGGACAAAATGTTCCAAAGGTGTCTAACTTGGTAACCAGAAAGAGTAAGCTTGTTTCTGGTGAAGAACTTGGAGATGGTGTTCGGAGGCAAGGCAGGACGGGGCGCAGTCTCAATGCCACAAGGTCACTGGCACCAATGACATCTGAGAAGCTTGGAAAAATAGGAACTGCGAAACAACTAAGAAGTGCAAGACAAGGATGTGATAAGAATGAAAGCAAGGTCGGTCGTCCACCAACAAGGAAGCTTTCTGATCGTAAGGCCTATGCTCGTCAAAAGCCTACTGCCATCAGTGCAGCAGCAGATTATTTTGTTGGGTCAGTAGATGGACACGGGGAGTTATTGGCTGCTGTGAAGGGTGTTATCAAATCTGCCTACTCCTTCTCCAGCCCATTTTGGAAGCAGATGGAACCTTTCTTCAGTTTGATAACCGAGGAAGATATTACTTACTGGAAGCAGAAGGAAAAGTTTATCTCAATTCCAGGATTGCAGAGGGTGGTTCCACTCCCTACTTTCTTAAAATCTGCCGTAAATCTTGAATCAAGCACTCTGACTCCAACTCCGGTTCCTTCAAACATAGATGGTTGTGAAACCATTGTTAATAGATATGGATTGATTGGCTGTGAAAGAGATGTCAGGTCTGATGCTCAACGTAGTGCTTGTAATAATACAGAAAAGTTACCACTGCCCAAGGGAGATCATAACATGGTACCTCTCTGTCAACGACTTATAGCTGCTTTGATATCAGAAGAAGATCGTAGCGGTGGAAATGAAGATTTGAAGTTTGATGCATATGATAATGAATCTGAGCTTGATGGAGAATTAGAATTGAGTGGTTTAGATCACCATTCACTATCTAATTTTCAGTTTTCTTCTCATTCTGCTAATAATGGTTATGGAATTATTGGGAAACCGGCACATGATGAAAGTGATATGATTGATATTCCTAATTTTGGGTTGAATCCAAGCTTTGGCAACTCAATAAATGGTTTTCTTCATGATAAAGCATTAATGTCTAGCTTGGCCTGTTCAGAGTTGCAATACAATAGCTTGGGTATAAATGATAAGCTTCTATTGGAGCTTCAAAGTATTGGACTTGACCTTGAATCAGTGCCTGAAATGGTGCAAGAAGAGGATGAAGCCATATCGGAGGATATTACTAGGTTAGGCGAGCTTTACCAAGGACAGGTTTCCAAGAAGAAAAATTTGCTCGATGGATTGTTGAAATCTGCATCAGCAGCAAAAGAACTTCATGAAAAGGATTTTGATCAACGTGCTCTAGACCAACTTGTTGTGACAGCTTATGAGAAATACACGGCTTGTCGAGGTGCATCGAGTGGAAAAAATTCAAGCAATAACAAAATGGTCAAGCAAGCTGCACTGGCATTTGTTAAATGGACATTGGAGCGATACCACCAATTTGAAGATACAGGCAAGAGCTGTTTCAGCGAGCCTTTATTCAAGGATTTGTTCCTAACTGCTTCTTCCCAGCATAGCATTGTTAGGAAATCAGATGGATTGGAGGCTGATTCTTCAAAACCATATGCTTCTCCTCTGTCTCTGGAAGCAACACCAGCTTCCATGGGTTCACAGCCGAGCCCATCACCAATTTCTCAGAATTTGGATAATCTTGATCTCACTTCATCAGATATGCTTCCTGCTTTAAATAATTCATCTGAGCAAACCAGTGGAAATGAAGATTTCTGGTCAAACAGGGTGAAGAAGAGAGAATTGTTCCTTGATGATGTCGGGGGTACTCAAGGTAATTCAAGTACTCCGGGGATTGGAAGTTCTCTAACAAGCAGCACAAAAGGAAAGAGGAGCGAGAGGGAGAGAGATGGAAAGGGACACGGCAGAGAGGTACCATCCAGAAATGGAACTACAAAAGCTGGTAGACAAGCATCATCAAGTGCTAAAGGAGAAAGAAAAACCAAAACAAAGCCTAAGCAGAAAGCAACTCAGCATTCTGTTTCTGTAAATGGCCTCCTTGGCAAGTTGCCAGAGCAACCAAAACCGGCATTGCCTTCTGTTTCAAAGTCTACCGAAAAGCCTAGTTATAGAAATACCAAGGAAAAGGATGAGTTTGGCTTGGGTGGATTGGATGAGCCAATTGATTTGTCCAACCTCCAGCTGCCTGGAATGGACGTGCTCGGCGATCCCGGTGACCTTGCTGACAATGGTCAAGATCTTGGTTCATGGTTGAATATTGATGACGATGGATTACAAGATCATGACGACTTTATGGGCCTTGAAATTCCCATGGATGACCTTTCAGACTTGAATATGATGGTTTGA
Protein sequence

>Msa1220940

MDVRTNSLVRPSGTVDRDKEKLRIANNGVIQSEERNLPIVGDGWETSKMKKKKRSCIKLDVSPSTTLNKPVNGFQETKQGMQQRLATDSRSKLSNDSNSFRYGSIGLGVSNGTVAASKSDGISQQTGLGIRTPTHRNGQDNNSLVNDKRGRSVSSDKDRVNFRAVNKATVRDEFNSASPTSSAKMNTAIRAPRSGSGVAPKMSPVVHRTAVPNDWELSHCTTKPPAGVNSTNNRKRVASAQSSSPPVVPWQRPQKSSRTARRTSFVPVVSSNDEAPAVDAVSDVAGNDIGLGFVRRSAGSSPQQIRLKGEPSPSSALSESEESGVAEVKPKEKGRKPEEIDLKAGQNVPKVSNLVTRKSKLVSGEELGDGVRRQGRTGRSLNATRSLAPMTSEKLGKIGTAKQLRSARQGCDKNESKVGRPPTRKLSDRKAYARQKPTAISAAADYFVGSVDGHGELLAAVKGVIKSAYSFSSPFWKQMEPFFSLITEEDITYWKQKEKFISIPGLQRVVPLPTFLKSAVNLESSTLTPTPVPSNIDGCETIVNRYGLIGCERDVRSDAQRSACNNTEKLPLPKGDHNMVPLCQRLIAALISEEDRSGGNEDLKFDAYDNESELDGELELSGLDHHSLSNFQFSSHSANNGYGIIGKPAHDESDMIDIPNFGLNPSFGNSINGFLHDKALMSSLACSELQYNSLGINDKLLLELQSIGLDLESVPEMVQEEDEAISEDITRLGELYQGQVSKKKNLLDGLLKSASAAKELHEKDFDQRALDQLVVTAYEKYTACRGASSGKNSSNNKMVKQAALAFVKWTLERYHQFEDTGKSCFSEPLFKDLFLTASSQHSIVRKSDGLEADSSKPYASPLSLEATPASMGSQPSPSPISQNLDNLDLTSSDMLPALNNSSEQTSGNEDFWSNRVKKRELFLDDVGGTQGNSSTPGIGSSLTSSTKGKRSERERDGKGHGREVPSRNGTTKAGRQASSSAKGERKTKTKPKQKATQHSVSVNGLLGKLPEQPKPALPSVSKSTEKPSYRNTKEKDEFGLGGLDEPIDLSNLQLPGMDVLGDPGDLADNGQDLGSWLNIDDDGLQDHDDFMGLEIPMDDLSDLNMMV*