AlfalfaGEDB | Msa1110120

M. sativa cultivar zhongmu-4 / Msa1110120

KEGG: -
GO: GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0005938 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0016020 GO:0016021 GO:0023052 GO:0031224 GO:0031226 GO:0032870 GO:0042221 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071944 GO:0099568
PFAM: PF00892.23

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1110120	KEH16738.1	96.835	158	5	0	1	158	116	273	2.55e-106	315

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1110120	sp\|Q94JU2\|WTR18_ARATH	52.469	162	64	3	1	149	204	365	1.76e-49	166

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1110120	A0A072TIJ2	96.835	158	5	0	1	158	116	273	1.22e-106	315

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0036140	Msa1110120	0.822555	2.224789e-53	-8.615850e-47
Msa0078900	Msa1110120	0.803605	3.218516e-49	-8.615850e-47
Msa0079070	Msa1110120	0.832362	9.870346e-56	-8.615850e-47
Msa0084080	Msa1110120	0.812770	3.587408e-51	-8.615850e-47
Msa0114060	Msa1110120	0.802583	5.238169e-49	-8.615850e-47
Msa0649110	Msa1110120	0.806621	7.525971e-50	-8.615850e-47
Msa0661650	Msa1110120	0.804431	2.167292e-49	-8.615850e-47
Msa0688390	Msa1110120	0.807761	4.315597e-50	-8.615850e-47
Msa0768530	Msa1110120	0.818147	2.281745e-52	-8.615850e-47
Msa0835800	Msa1110120	0.812886	3.383274e-51	-8.615850e-47
Msa0171540	Msa1110120	0.830882	2.286549e-55	-8.615850e-47
Msa0221470	Msa1110120	0.817673	2.918737e-52	-8.615850e-47
Msa0383800	Msa1110120	0.840520	8.275427e-58	-8.615850e-47
Msa0434180	Msa1110120	0.840624	7.774044e-58	-8.615850e-47
Msa0455760	Msa1110120	0.808583	2.883442e-50	-8.615850e-47
Msa0471900	Msa1110120	0.815168	1.061249e-51	-8.615850e-47
Msa1048220	Msa1110120	0.805075	1.590008e-49	-8.615850e-47
Msa1056240	Msa1110120	0.818292	2.115284e-52	-8.615850e-47
Msa1104560	Msa1110120	0.841484	4.622268e-58	-8.615850e-47
Msa0267370	Msa1110120	0.812681	3.750836e-51	-8.615850e-47
Msa0343850	Msa1110120	0.805341	1.399015e-49	-8.615850e-47
Msa0363790	Msa1110120	0.812450	4.213657e-51	-8.615850e-47
Msa1110120	Msa1154280	0.819996	8.660237e-53	-8.615850e-47
Msa1110120	Msa1162780	0.822904	1.845736e-53	-8.615850e-47
Msa1110120	Msa1204530	0.821569	3.765936e-53	-8.615850e-47
Msa1110120	Msa1204630	0.824183	9.266289e-54	-8.615850e-47
Msa1110120	Msa1287460	0.803909	2.782967e-49	-8.615850e-47
Msa1110120	Msa1305810	0.827143	1.840925e-54	-8.615850e-47
Msa1110120	Msa1331000	0.810065	1.387409e-50	-8.615850e-47
Msa1110120	Msa1393570	0.805046	1.612409e-49	-8.615850e-47
Msa1110120	Msa1397120	0.807851	4.130539e-50	-8.615850e-47
Msa1110120	Msa1403890	0.801034	1.089263e-48	-8.615850e-47
Msa1110120	Msa1458750	0.800259	1.567120e-48	-8.615850e-47
Msa0572840	Msa1110120	0.800807	1.212076e-48	-8.615850e-47
Msa0585230	Msa1110120	0.804830	1.789026e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1110120	MtrunA17_Chr7g0227921	96.835	158	5	0	1	158	207	364	3.69e-109	315
Msa1110120	MtrunA17_Chr6g0451191	52.903	155	73	0	1	155	81	235	2.72e-57	179
Msa1110120	MtrunA17_Chr6g0451201	53.797	158	73	0	1	158	204	361	6.03e-51	166
Msa1110120	MtrunA17_Chr6g0451211	53.165	158	74	0	1	158	209	366	2.21e-50	165
Msa1110120	MtrunA17_Chr6g0451171	52.532	158	75	0	1	158	206	363	5.66e-49	161
Msa1110120	MtrunA17_Chr6g0451251	54.717	159	71	1	1	158	207	365	1.84e-48	160
Msa1110120	MtrunA17_Chr1g0150151	49.007	151	71	2	1	151	211	355	1.84e-43	147
Msa1110120	MtrunA17_Chr6g0451241	57.944	107	45	0	52	158	9	115	4.49e-41	133
Msa1110120	MtrunA17_Chr4g0059311	43.056	144	82	0	1	144	209	352	8.27e-36	127
Msa1110120	MtrunA17_Chr6g0451261	58.252	103	43	0	1	103	208	310	9.47e-36	130
Msa1110120	MtrunA17_Chr5g0413951	50.833	120	59	0	4	123	207	326	7.04e-34	121
Msa1110120	MtrunA17_Chr5g0413931	42.105	152	80	3	1	149	203	349	1.16e-33	121
Msa1110120	MtrunA17_Chr3g0126101	41.892	148	82	1	1	148	200	343	7.43e-33	119
Msa1110120	MtrunA17_Chr5g0413941	50.407	123	61	0	1	123	204	326	1.04e-32	118
Msa1110120	MtrunA17_Chr5g0413921	41.722	151	74	3	1	148	204	343	1.86e-30	112
Msa1110120	MtrunA17_Chr3g0126091	34.965	143	92	1	2	143	212	354	8.28e-26	100
Msa1110120	MtrunA17_Chr5g0413961	38.889	144	86	2	2	144	208	350	6.72e-24	95.5
Msa1110120	MtrunA17_Chr3g0114731	39.683	126	76	0	2	127	214	339	2.19e-23	94.4
Msa1110120	MtrunA17_Chr1g0160171	40.323	124	74	0	1	124	213	336	8.15e-23	92.8
Msa1110120	MtrunA17_Chr3g0114691	37.500	136	83	1	1	134	219	354	2.06e-22	91.7
Msa1110120	MtrunA17_Chr3g0114711	33.113	151	94	2	1	144	245	395	2.02e-20	86.3
Msa1110120	MtrunA17_Chr8g0334721	34.307	137	81	2	22	149	9	145	2.96e-20	82.0
Msa1110120	MtrunA17_Chr7g0255561	43.434	99	56	0	25	123	239	337	3.39e-19	82.8
Msa1110120	MtrunA17_Chr7g0255581	43.434	99	56	0	25	123	239	337	3.39e-19	82.8
Msa1110120	MtrunA17_Chr7g0263101	33.117	154	96	3	1	152	210	358	6.75e-19	82.0
Msa1110120	MtrunA17_Chr1g0177231	37.634	93	56	1	50	142	28	118	6.80e-19	77.4
Msa1110120	MtrunA17_Chr3g0081421	35.965	114	73	0	19	132	237	350	9.01e-19	81.6
Msa1110120	MtrunA17_Chr3g0081511	38.596	114	70	0	19	132	234	347	9.01e-19	81.6
Msa1110120	MtrunA17_Chr8g0354121	40.385	104	62	0	25	128	239	342	1.80e-18	80.9
Msa1110120	MtrunA17_Chr3g0129591	29.677	155	99	1	1	155	208	352	4.85e-18	79.3
Msa1110120	MtrunA17_Chr4g0050881	34.711	121	79	0	2	122	209	329	6.82e-18	79.0
Msa1110120	MtrunA17_Chr1g0186641	32.624	141	94	1	1	140	208	348	8.84e-18	78.6
Msa1110120	MtrunA17_Chr1g0171301	34.667	150	88	2	1	149	213	353	1.17e-17	78.2
Msa1110120	MtrunA17_Chr6g0483401	30.872	149	96	1	1	149	211	352	1.27e-17	78.2
Msa1110120	MtrunA17_Chr1g0172891	37.805	82	49	1	61	142	17	96	1.70e-17	73.6
Msa1110120	MtrunA17_Chr1g0182291	39.604	101	61	0	22	122	232	332	2.26e-17	77.4
Msa1110120	MtrunA17_Chr2g0332001	35.115	131	74	3	18	141	247	373	3.15e-17	77.4
Msa1110120	MtrunA17_Chr1g0186611	33.071	127	84	1	1	126	211	337	3.83e-17	77.0
Msa1110120	MtrunA17_Chr2g0310441	31.783	129	88	0	4	132	211	339	3.87e-17	77.0
Msa1110120	MtrunA17_Chr6g0463971	33.065	124	83	0	2	125	216	339	5.16e-17	76.6
Msa1110120	MtrunA17_Chr3g0129601	29.412	136	95	1	1	136	229	363	9.36e-17	75.9
Msa1110120	MtrunA17_Chr2g0278551	36.000	125	80	0	2	126	212	336	1.20e-16	75.9
Msa1110120	MtrunA17_Chr2g0278541	27.381	168	110	3	2	157	218	385	1.44e-16	75.5
Msa1110120	MtrunA17_Chr3g0129571	30.233	129	90	0	1	129	210	338	2.66e-16	74.7
Msa1110120	MtrunA17_Chr1g0160181	28.750	160	105	3	1	151	217	376	2.74e-16	74.7
Msa1110120	MtrunA17_Chr8g0334751	31.707	123	83	1	4	126	212	333	2.91e-16	74.3
Msa1110120	MtrunA17_Chr8g0334761	30.147	136	94	1	4	138	211	346	3.30e-16	74.3
Msa1110120	MtrunA17_Chr2g0278561	27.703	148	98	1	4	151	218	356	3.56e-16	74.3
Msa1110120	MtrunA17_Chr8g0334771	29.932	147	98	1	4	150	211	352	3.62e-16	74.3
Msa1110120	MtrunA17_Chr8g0383731	29.032	124	88	0	1	124	208	331	2.57e-15	71.6
Msa1110120	MtrunA17_Chr2g0290611	37.234	94	59	0	29	122	239	332	2.85e-15	71.6
Msa1110120	MtrunA17_Chr1g0186601	31.206	141	93	2	1	140	211	348	5.87e-15	70.9
Msa1110120	MtrunA17_Chr4g0073241	30.128	156	88	5	5	155	210	349	1.35e-14	69.7
Msa1110120	MtrunA17_Chr2g0278021	26.950	141	98	1	4	139	94	234	2.65e-14	68.6
Msa1110120	MtrunA17_Chr1g0186571	32.283	127	85	1	1	126	208	334	3.74e-14	68.6
Msa1110120	MtrunA17_Chr1g0164831	28.676	136	95	1	2	137	200	333	5.74e-14	67.8
Msa1110120	MtrunA17_Chr4g0051021	33.962	106	69	1	18	122	229	334	5.74e-14	68.2
Msa1110120	MtrunA17_Chr3g0142131	31.707	123	84	0	1	123	230	352	6.21e-14	68.2
Msa1110120	MtrunA17_Chr1g0160111	27.027	148	108	0	2	149	211	358	1.49e-13	67.0
Msa1110120	MtrunA17_Chr1g0186561	34.646	127	82	1	1	126	212	338	1.54e-13	66.6
Msa1110120	MtrunA17_Chr1g0184221	28.030	132	92	1	2	133	224	352	1.67e-13	66.6
Msa1110120	MtrunA17_Chr1g0155761	30.081	123	86	0	1	123	236	358	2.22e-13	66.6
Msa1110120	MtrunA17_Chr5g0429001	28.099	121	87	0	2	122	154	274	5.25e-13	65.1
Msa1110120	MtrunA17_Chr3g0129581	26.452	155	104	1	1	155	208	352	8.34e-13	64.7
Msa1110120	MtrunA17_Chr4g0050931	28.099	121	87	0	2	122	178	298	9.94e-13	64.3
Msa1110120	MtrunA17_Chr7g0271561	29.008	131	90	1	2	129	212	342	1.01e-12	64.7
Msa1110120	MtrunA17_Chr3g0084091	28.571	126	80	2	2	122	129	249	2.61e-12	63.2
Msa1110120	MtrunA17_Chr5g0428881	26.446	121	89	0	2	122	219	339	3.83e-12	62.8
Msa1110120	MtrunA17_Chr5g0441761	26.207	145	101	2	2	140	207	351	5.38e-12	62.4
Msa1110120	MtrunA17_Chr2g0284261	26.056	142	96	1	2	134	204	345	1.04e-11	61.6
Msa1110120	MtrunA17_Chr3g0114701	30.894	123	84	1	1	122	208	330	1.40e-11	61.2
Msa1110120	MtrunA17_Chr4g0050891	34.524	84	55	0	34	117	248	331	2.27e-11	60.5
Msa1110120	MtrunA17_Chr4g0050941	31.731	104	71	0	19	122	235	338	3.14e-11	60.1
Msa1110120	MtrunA17_Chr1g0182261	32.308	130	85	3	4	130	89	218	3.80e-11	59.3
Msa1110120	MtrunA17_Chr5g0407971	28.455	123	87	1	1	123	223	344	4.75e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1110120	AT3G28050.1	52.469	162	64	3	1	149	204	365	1.78e-50	166
Msa1110120	AT5G40240.1	49.655	145	68	1	1	145	219	358	1.30e-45	153
Msa1110120	AT5G40240.3	49.655	145	68	1	1	145	219	358	1.30e-45	153
Msa1110120	AT5G40240.2	49.655	145	68	1	1	145	233	372	2.29e-45	152
Msa1110120	AT5G40230.1	47.651	149	73	1	1	149	220	363	1.42e-42	145
Msa1110120	AT4G15540.1	51.515	132	64	0	1	132	203	334	3.78e-40	138
Msa1110120	AT4G15540.2	51.515	132	64	0	1	132	203	334	3.78e-40	138
Msa1110120	AT3G28130.3	45.033	151	76	3	1	150	86	230	1.23e-37	129
Msa1110120	AT3G28130.5	45.695	151	75	3	1	150	125	269	3.12e-37	129
Msa1110120	AT3G28130.1	45.695	151	75	3	1	150	125	269	3.12e-37	129
Msa1110120	AT3G28130.2	45.752	153	72	4	1	150	211	355	1.67e-36	129
Msa1110120	AT3G28070.5	43.709	151	79	4	1	150	86	231	3.24e-35	122
Msa1110120	AT3G28070.2	43.709	151	79	4	1	150	123	268	9.28e-35	122
Msa1110120	AT3G28080.9	43.046	151	81	3	1	150	86	232	1.35e-34	121
Msa1110120	AT3G28080.5	43.046	151	81	3	1	150	123	269	4.16e-34	120
Msa1110120	AT3G28080.7	43.046	151	81	3	1	150	123	269	4.16e-34	120
Msa1110120	AT3G28080.8	43.046	151	81	3	1	150	123	269	4.16e-34	120
Msa1110120	AT3G28080.6	43.046	151	81	3	1	150	123	269	4.16e-34	120
Msa1110120	AT3G28070.1	43.709	151	79	4	1	150	215	360	6.34e-34	122
Msa1110120	AT3G28080.1	43.046	151	81	3	1	150	212	358	2.33e-33	120
Msa1110120	AT3G28080.2	43.046	151	81	3	1	150	204	350	2.53e-33	120
Msa1110120	AT5G40210.1	39.189	148	88	2	1	147	193	339	3.31e-33	120
Msa1110120	AT3G28100.1	45.985	137	66	4	1	132	212	345	2.75e-30	112
Msa1110120	AT1G70260.1	35.252	139	90	0	1	139	216	354	4.83e-25	99.0
Msa1110120	AT1G21890.1	40.458	131	78	0	1	131	216	346	9.20e-25	98.6
Msa1110120	AT4G08300.1	34.043	141	90	1	1	138	210	350	3.87e-23	94.0
Msa1110120	AT2G39510.1	33.544	158	102	2	1	157	204	359	7.19e-23	93.2
Msa1110120	AT1G60050.1	34.722	144	89	2	4	142	222	365	1.65e-22	92.0
Msa1110120	AT3G28080.4	47.778	90	44	1	61	150	129	215	3.27e-22	88.6
Msa1110120	AT2G37450.3	37.398	123	76	1	1	122	110	232	9.50e-22	88.6
Msa1110120	AT3G28080.3	47.778	90	44	1	61	150	218	304	1.00e-21	89.4
Msa1110120	AT1G44800.1	35.484	124	80	0	1	124	207	330	2.00e-21	89.4
Msa1110120	AT2G37450.1	37.398	123	76	1	1	122	143	265	2.03e-21	88.2
Msa1110120	AT2G37450.2	37.398	123	76	1	1	122	182	304	4.25e-21	87.8
Msa1110120	AT3G28070.3	44.554	101	54	2	1	100	215	314	1.96e-20	85.9
Msa1110120	AT3G28060.1	42.574	101	56	2	1	100	55	154	4.46e-20	81.6
Msa1110120	AT4G08290.1	29.530	149	105	0	1	149	211	359	4.58e-19	82.8
Msa1110120	AT2G37460.1	36.585	123	77	1	1	122	209	331	5.63e-19	82.4
Msa1110120	AT5G07050.1	42.574	101	58	0	25	125	246	346	1.72e-18	81.3
Msa1110120	AT4G30420.1	31.343	134	92	0	4	137	201	334	1.08e-17	79.0
Msa1110120	AT4G30420.2	31.343	134	92	0	4	137	211	344	1.10e-17	79.0
Msa1110120	AT5G64700.1	30.657	137	92	1	1	137	211	344	5.97e-17	76.6
Msa1110120	AT1G25270.1	33.613	119	79	0	19	137	219	337	1.27e-15	73.2
Msa1110120	AT1G68170.2	31.452	124	85	0	15	138	226	349	1.37e-15	73.2
Msa1110120	AT1G43650.1	29.851	134	94	0	1	134	200	333	1.45e-15	72.8
Msa1110120	AT1G68170.1	31.452	124	85	0	15	138	216	339	1.71e-15	72.8
Msa1110120	AT3G30340.1	33.607	122	81	0	2	123	209	330	1.96e-15	72.4
Msa1110120	AT3G18200.1	30.935	139	94	1	1	137	99	237	3.81e-15	70.9
Msa1110120	AT3G18200.2	30.935	139	94	1	1	137	229	367	8.71e-15	70.9
Msa1110120	AT3G56620.1	38.043	92	57	0	28	119	230	321	1.91e-14	69.7
Msa1110120	AT2G40900.1	35.652	115	69	2	25	139	226	335	8.49e-14	68.2
Msa1110120	AT1G21890.2	37.624	101	63	0	1	101	216	316	1.44e-13	67.4
Msa1110120	AT1G75500.1	28.676	136	97	0	1	136	223	358	1.73e-12	64.3
Msa1110120	AT1G75500.2	28.676	136	97	0	1	136	223	358	1.73e-12	64.3
Msa1110120	AT5G45370.6	28.205	156	100	6	1	149	129	279	9.01e-12	61.6
Msa1110120	AT5G45370.5	28.205	156	100	6	1	149	129	279	9.01e-12	61.6
Msa1110120	AT5G45370.3	28.205	156	100	6	1	149	171	321	1.01e-11	62.0
Msa1110120	AT5G45370.2	28.205	156	100	6	1	149	231	381	1.51e-11	61.6
Msa1110120	AT5G45370.4	28.205	156	100	6	1	149	231	381	1.51e-11	61.6
Msa1110120	AT5G45370.1	28.205	156	100	6	1	149	207	357	1.55e-11	61.6
Msa1110120	AT5G47470.2	35.714	84	53	1	60	143	310	392	1.72e-11	61.6
Msa1110120	AT5G47470.1	35.714	84	53	1	60	143	282	364	2.14e-11	61.2
Msa1110120	AT5G13670.1	34.951	103	65	2	22	123	228	329	2.55e-11	60.8
Msa1110120	AT4G28040.1	29.323	133	86	3	13	138	203	334	2.59e-11	60.8
Msa1110120	AT4G28040.5	29.323	133	86	3	13	138	203	334	2.59e-11	60.8
Msa1110120	AT4G28040.3	29.323	133	86	3	13	138	203	334	2.59e-11	60.8
Msa1110120	AT4G28040.4	29.323	133	86	3	13	138	203	334	2.59e-11	60.8
Msa1110120	AT4G28040.2	29.323	133	86	3	13	138	203	334	2.59e-11	60.8
Msa1110120	AT1G09380.1	30.693	101	70	0	19	119	226	326	6.53e-11	59.7

Find 60 sgRNAs with CRISPR-Local

Find 210 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATGGATGCAAATGTATAAA+AGG	0.206882	7_3:-54721910	Msa1110120:exon
AAGATCACTGTTAGTTCATT+TGG	0.241737	7_3:+54723057	None:intergenic
TTACTAACTACTCACTTTAG+AGG	0.241945	7_3:+54721878	None:intergenic
ACCACTGATAAATAAATTAA+TGG	0.242809	7_3:+54721799	None:intergenic
TGCATATGTGCTACGTATAA+AGG	0.248399	7_3:-54722803	Msa1110120:CDS
CTATGGGAGTTGTGTTCCTT+GGG	0.307563	7_3:-54722729	Msa1110120:CDS
GTCTACTGTACAAAGGCATT+TGG	0.309377	7_3:-54721537	Msa1110120:three_prime_UTR
ATAGTCACACATGTGTATAT+TGG	0.317744	7_3:+54721583	None:intergenic
TGATAGACTACAAAAGAAAA+TGG	0.318170	7_3:-54721928	Msa1110120:CDS
GCTATGGGAGTTGTGTTCCT+TGG	0.340738	7_3:-54722730	Msa1110120:CDS
AGTAGCAACTTCTGCAAGTT+GGG	0.341488	7_3:-54721610	Msa1110120:three_prime_UTR
GGAGCCACAATAATATCAAT+TGG	0.341846	7_3:-54722059	Msa1110120:CDS
AATGCAAGTGCATGGAAAAT+AGG	0.350999	7_3:-54722976	Msa1110120:CDS
GCAAATGTATAAAAGGGATT+TGG	0.374996	7_3:-54721903	Msa1110120:exon
AATTGTCATTGCTGTGGCTA+TGG	0.375954	7_3:-54722746	Msa1110120:CDS
ATGTCTCCCTAGTCCCTAGA+TGG	0.385779	7_3:+54721726	None:intergenic
GCATATGTGCTACGTATAAA+GGG	0.394947	7_3:-54722802	Msa1110120:CDS
TCTACTGTACAAAGGCATTT+GGG	0.404308	7_3:-54721536	Msa1110120:three_prime_UTR
AGCAGAGTATCTACCCATCT+AGG	0.429455	7_3:-54721740	Msa1110120:three_prime_UTR
ATTGTCATTGCTGTGGCTAT+GGG	0.457527	7_3:-54722745	Msa1110120:CDS
ATGGATGCAAATGTATAAAA+GGG	0.459442	7_3:-54721909	Msa1110120:exon
GAGCCACAATAATATCAATT+GGG	0.460525	7_3:-54722058	Msa1110120:CDS
CATCATAACAACATCATCAT+TGG	0.467097	7_3:+54721837	None:intergenic
TATCTACCCATCTAGGGACT+AGG	0.490814	7_3:-54721733	Msa1110120:three_prime_UTR
AAGTAGCAACTTCTGCAAGT+TGG	0.500687	7_3:-54721611	Msa1110120:three_prime_UTR
AATTTGTGTTGTTTGCTACA+TGG	0.508836	7_3:+54721650	None:intergenic
GTTTCATAGCTTTGCAAGAG+AGG	0.511744	7_3:+54721951	None:intergenic
AGCATTATAGCTGGAATTGT+AGG	0.513970	7_3:-54723015	Msa1110120:CDS
GGGATACTCTCCACCTTGGA+AGG	0.520551	7_3:-54722708	Msa1110120:intron
ACTTGCTTCCATCCTTTGCT+CGG	0.525985	7_3:-54722941	Msa1110120:intron
TTTGTTGTCTTCTTTGCATG+TGG	0.526388	7_3:+54721490	None:intergenic
ACCATTAATTTATTTATCAG+TGG	0.540110	7_3:-54721800	Msa1110120:three_prime_UTR
AAACCCAATTGATATTATTG+TGG	0.543749	7_3:+54722055	None:intergenic
TCTACAGGTTCAAATTATGA+AGG	0.549298	7_3:-54723085	Msa1110120:exon
CAGCTATAATGCTTACACAT+AGG	0.549528	7_3:+54723025	None:intergenic
CTATGTGTAAGCATTATAGC+TGG	0.553567	7_3:-54723024	Msa1110120:CDS
CTTGGGGATACTCTCCACCT+TGG	0.559205	7_3:-54722712	Msa1110120:CDS
ATCTACCCATCTAGGGACTA+GGG	0.564100	7_3:-54721732	Msa1110120:three_prime_UTR
GTAGCAACTTCTGCAAGTTG+GGG	0.570670	7_3:-54721609	Msa1110120:three_prime_UTR
ATGTTTATCCTACCGAGCAA+AGG	0.577106	7_3:+54722929	None:intergenic
GTAAATCATAGTACCTTCCA+AGG	0.577444	7_3:+54722695	None:intergenic
GTGAGCCAAATGCAAGTGCA+TGG	0.578354	7_3:-54722984	Msa1110120:CDS
GCAGAGTATCTACCCATCTA+GGG	0.578392	7_3:-54721739	Msa1110120:three_prime_UTR
TTATCCTACCGAGCAAAGGA+TGG	0.584798	7_3:+54722933	None:intergenic
GAGGTGGTTGAAGATGTCTC+TGG	0.600990	7_3:-54722002	Msa1110120:CDS
TGTCTCCCTAGTCCCTAGAT+GGG	0.603357	7_3:+54721727	None:intergenic
TATGGGAGTTGTGTTCCTTG+GGG	0.604835	7_3:-54722728	Msa1110120:CDS
CATGTGTGACTATAAAGACA+AGG	0.637657	7_3:-54721573	Msa1110120:three_prime_UTR
CATATGTGCTACGTATAAAG+GGG	0.638887	7_3:-54722801	Msa1110120:CDS
GGGTAAAGCAAAAGAAGAGG+TGG	0.640628	7_3:-54722018	Msa1110120:CDS
ATACTCTGCTGATACGAACA+AGG	0.644563	7_3:+54721753	None:intergenic
GTGGGGTAAAGCAAAAGAAG+AGG	0.660709	7_3:-54722021	Msa1110120:CDS
CATTATTGTCTACTGTACAA+AGG	0.661320	7_3:-54721544	Msa1110120:three_prime_UTR
ACTCTCAATTGTCATTGCTG+TGG	0.661857	7_3:-54722752	Msa1110120:CDS
ACAGCAATGACAATTGAGAG+TGG	0.674965	7_3:+54722754	None:intergenic
TAGCAACTTCTGCAAGTTGG+GGG	0.676349	7_3:-54721608	Msa1110120:three_prime_UTR
AATCATAGTACCTTCCAAGG+TGG	0.690246	7_3:+54722698	None:intergenic
CAAGGTGGAGAGTATCCCCA+AGG	0.691065	7_3:+54722713	None:intergenic
ATATGTGCTACGTATAAAGG+GGG	0.701724	7_3:-54722800	Msa1110120:CDS
ATGTGTGACTATAAAGACAA+GGG	0.706676	7_3:-54721572	Msa1110120:three_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTATACAATTCATATGATT+AGG	-	chr7_3:54721669-54721688	Msa1110120:three_prime_UTR	15.0%
!!	TTATACAATTCATATGATTA+GGG	-	chr7_3:54721670-54721689	Msa1110120:three_prime_UTR	15.0%
!!!	TTCAATTGATTAATGATTTT+CGG	-	chr7_3:54721955-54721974	Msa1110120:CDS	15.0%
!!!	TTTAATTTTTGTAGAGTTTT+GGG	+	chr7_3:54723081-54723100	None:intergenic	15.0%
!!	TTTATACAATTCATATGATT+AGG	-	chr7_3:54721669-54721688	Msa1110120:three_prime_UTR	15.0%
!!	TTATACAATTCATATGATTA+GGG	-	chr7_3:54721670-54721689	Msa1110120:three_prime_UTR	15.0%
!!!	TTCAATTGATTAATGATTTT+CGG	-	chr7_3:54721955-54721974	Msa1110120:CDS	15.0%
!!!	TTTAATTTTTGTAGAGTTTT+GGG	+	chr7_3:54723081-54723100	None:intergenic	15.0%
!!!	CAATTGAGAATTGAATATTT+TGG	+	chr7_3:54721859-54721878	None:intergenic	20.0%
!!	ACCAAAAATTAATATTTGAC+TGG	-	chr7_3:54722185-54722204	Msa1110120:intron	20.0%
!!!	TCCAGTCAAATATTAATTTT+TGG	+	chr7_3:54722189-54722208	None:intergenic	20.0%
!!	ACCATTAATTTATTTATCAG+TGG	-	chr7_3:54722729-54722748	Msa1110120:CDS	20.0%
!!	ACCACTGATAAATAAATTAA+TGG	+	chr7_3:54722733-54722752	None:intergenic	20.0%
!!!	GTTTAATTTTTGTAGAGTTT+TGG	+	chr7_3:54723082-54723101	None:intergenic	20.0%
!!!	CAATTGAGAATTGAATATTT+TGG	+	chr7_3:54721859-54721878	None:intergenic	20.0%
!!	ACCAAAAATTAATATTTGAC+TGG	-	chr7_3:54722185-54722204	Msa1110120:intron	20.0%
!!!	TCCAGTCAAATATTAATTTT+TGG	+	chr7_3:54722189-54722208	None:intergenic	20.0%
!!	ACCATTAATTTATTTATCAG+TGG	-	chr7_3:54722729-54722748	Msa1110120:CDS	20.0%
!!	ACCACTGATAAATAAATTAA+TGG	+	chr7_3:54722733-54722752	None:intergenic	20.0%
!!!	GTTTAATTTTTGTAGAGTTT+TGG	+	chr7_3:54723082-54723101	None:intergenic	20.0%
!	GGATAAACATGAAATAATAC+AGG	-	chr7_3:54721613-54721632	Msa1110120:three_prime_UTR	25.0%
!!	TCATATGATTAGGGAATTTT+TGG	-	chr7_3:54721679-54721698	Msa1110120:three_prime_UTR	25.0%
!	AAACCCAATTGATATTATTG+TGG	+	chr7_3:54722477-54722496	None:intergenic	25.0%
!	TGATAGACTACAAAAGAAAA+TGG	-	chr7_3:54722601-54722620	Msa1110120:intron	25.0%
!	AATGGATGCAAATGTATAAA+AGG	-	chr7_3:54722619-54722638	Msa1110120:intron	25.0%
!	ATGGATGCAAATGTATAAAA+GGG	-	chr7_3:54722620-54722639	Msa1110120:intron	25.0%
!	TTGAACCTGTAGATTATAAA+GGG	+	chr7_3:54721437-54721456	None:intergenic	25.0%
!	TTTGAACCTGTAGATTATAA+AGG	+	chr7_3:54721438-54721457	None:intergenic	25.0%
!	GGATAAACATGAAATAATAC+AGG	-	chr7_3:54721613-54721632	Msa1110120:three_prime_UTR	25.0%
!!	TCATATGATTAGGGAATTTT+TGG	-	chr7_3:54721679-54721698	Msa1110120:three_prime_UTR	25.0%
!	AAACCCAATTGATATTATTG+TGG	+	chr7_3:54722477-54722496	None:intergenic	25.0%
!	TGATAGACTACAAAAGAAAA+TGG	-	chr7_3:54722601-54722620	Msa1110120:intron	25.0%
!	AATGGATGCAAATGTATAAA+AGG	-	chr7_3:54722619-54722638	Msa1110120:intron	25.0%
!	ATGGATGCAAATGTATAAAA+GGG	-	chr7_3:54722620-54722639	Msa1110120:intron	25.0%
	TCTACAGGTTCAAATTATGA+AGG	-	chr7_3:54721444-54721463	Msa1110120:three_prime_UTR	30.0%
	AAGATCACTGTTAGTTCATT+TGG	+	chr7_3:54721475-54721494	None:intergenic	30.0%
	CTACGTTGAATACAAATGTT+TGG	-	chr7_3:54721932-54721951	Msa1110120:CDS	30.0%
	CATTAATCACATGAGTTCAA+CGG	+	chr7_3:54722133-54722152	None:intergenic	30.0%
	ATGTAATTTGACCTTAGTTG+AGG	+	chr7_3:54722158-54722177	None:intergenic	30.0%
	ATCTTTACCAAGACTTTACT+TGG	-	chr7_3:54722212-54722231	Msa1110120:intron	30.0%
	TGATCGAACTCTAAATTAGT+CGG	-	chr7_3:54722239-54722258	Msa1110120:intron	30.0%
	GAGCCACAATAATATCAATT+GGG	-	chr7_3:54722471-54722490	Msa1110120:intron	30.0%
!!	TTGGGTTTTATACAGTAATG+TGG	-	chr7_3:54722489-54722508	Msa1110120:intron	30.0%
!!	TGGGTTTTATACAGTAATGT+GGG	-	chr7_3:54722490-54722509	Msa1110120:intron	30.0%
	GCAAATGTATAAAAGGGATT+TGG	-	chr7_3:54722626-54722645	Msa1110120:intron	30.0%
	TTACTAACTACTCACTTTAG+AGG	+	chr7_3:54722654-54722673	None:intergenic	30.0%
	CATCATAACAACATCATCAT+TGG	+	chr7_3:54722695-54722714	None:intergenic	30.0%
!!	AATTTGTGTTGTTTGCTACA+TGG	+	chr7_3:54722882-54722901	None:intergenic	30.0%
	ATAGTCACACATGTGTATAT+TGG	+	chr7_3:54722949-54722968	None:intergenic	30.0%
	ATGTGTGACTATAAAGACAA+GGG	-	chr7_3:54722957-54722976	Msa1110120:CDS	30.0%
	CATTATTGTCTACTGTACAA+AGG	-	chr7_3:54722985-54723004	Msa1110120:CDS	30.0%
	TCTACAGGTTCAAATTATGA+AGG	-	chr7_3:54721444-54721463	Msa1110120:three_prime_UTR	30.0%
	AAGATCACTGTTAGTTCATT+TGG	+	chr7_3:54721475-54721494	None:intergenic	30.0%
	CTACGTTGAATACAAATGTT+TGG	-	chr7_3:54721932-54721951	Msa1110120:CDS	30.0%
	CATTAATCACATGAGTTCAA+CGG	+	chr7_3:54722133-54722152	None:intergenic	30.0%
	ATGTAATTTGACCTTAGTTG+AGG	+	chr7_3:54722158-54722177	None:intergenic	30.0%
	ATCTTTACCAAGACTTTACT+TGG	-	chr7_3:54722212-54722231	Msa1110120:intron	30.0%
	TGATCGAACTCTAAATTAGT+CGG	-	chr7_3:54722239-54722258	Msa1110120:intron	30.0%
	GAGCCACAATAATATCAATT+GGG	-	chr7_3:54722471-54722490	Msa1110120:intron	30.0%
!!	TTGGGTTTTATACAGTAATG+TGG	-	chr7_3:54722489-54722508	Msa1110120:intron	30.0%
!!	TGGGTTTTATACAGTAATGT+GGG	-	chr7_3:54722490-54722509	Msa1110120:intron	30.0%
	GCAAATGTATAAAAGGGATT+TGG	-	chr7_3:54722626-54722645	Msa1110120:intron	30.0%
	TTACTAACTACTCACTTTAG+AGG	+	chr7_3:54722654-54722673	None:intergenic	30.0%
	CATCATAACAACATCATCAT+TGG	+	chr7_3:54722695-54722714	None:intergenic	30.0%
!!	AATTTGTGTTGTTTGCTACA+TGG	+	chr7_3:54722882-54722901	None:intergenic	30.0%
	ATAGTCACACATGTGTATAT+TGG	+	chr7_3:54722949-54722968	None:intergenic	30.0%
	ATGTGTGACTATAAAGACAA+GGG	-	chr7_3:54722957-54722976	Msa1110120:CDS	30.0%
	CATTATTGTCTACTGTACAA+AGG	-	chr7_3:54722985-54723004	Msa1110120:CDS	30.0%
	CAGCTATAATGCTTACACAT+AGG	+	chr7_3:54721507-54721526	None:intergenic	35.0%
	CTATGTGTAAGCATTATAGC+TGG	-	chr7_3:54721505-54721524	Msa1110120:three_prime_UTR	35.0%
	AGCATTATAGCTGGAATTGT+AGG	-	chr7_3:54721514-54721533	Msa1110120:three_prime_UTR	35.0%
!	ATTTTCCATGCACTTGCATT+TGG	+	chr7_3:54721553-54721572	None:intergenic	35.0%
	AATGCAAGTGCATGGAAAAT+AGG	-	chr7_3:54721553-54721572	Msa1110120:three_prime_UTR	35.0%
	TGCATATGTGCTACGTATAA+AGG	-	chr7_3:54721726-54721745	Msa1110120:three_prime_UTR	35.0%
	GCATATGTGCTACGTATAAA+GGG	-	chr7_3:54721727-54721746	Msa1110120:three_prime_UTR	35.0%
	CATATGTGCTACGTATAAAG+GGG	-	chr7_3:54721728-54721747	Msa1110120:three_prime_UTR	35.0%
	ATATGTGCTACGTATAAAGG+GGG	-	chr7_3:54721729-54721748	Msa1110120:three_prime_UTR	35.0%
	GTAAATCATAGTACCTTCCA+AGG	+	chr7_3:54721837-54721856	None:intergenic	35.0%
	TCGGAGATTGTTGAATCAAT+AGG	-	chr7_3:54721974-54721993	Msa1110120:CDS	35.0%
	CGGAGATTGTTGAATCAATA+GGG	-	chr7_3:54721975-54721994	Msa1110120:CDS	35.0%
	AGTCTGGTAAATGATTGTTC+TGG	+	chr7_3:54722023-54722042	None:intergenic	35.0%
!!	AAACGGTTTTGATAATCCAG+GGG	+	chr7_3:54722065-54722084	None:intergenic	35.0%
!!	GAAACGGTTTTGATAATCCA+GGG	+	chr7_3:54722066-54722085	None:intergenic	35.0%
!!	AGAAACGGTTTTGATAATCC+AGG	+	chr7_3:54722067-54722086	None:intergenic	35.0%
	AAAACCGTTTCTCATGAGAA+CGG	-	chr7_3:54722075-54722094	Msa1110120:intron	35.0%
	TGATTAATGAGCCTCAACTA+AGG	-	chr7_3:54722144-54722163	Msa1110120:intron	35.0%
	TCAAGAACCAAGTAAAGTCT+TGG	+	chr7_3:54722222-54722241	None:intergenic	35.0%
	CTCTTAACCTTTCGATTCAT+CGG	+	chr7_3:54722277-54722296	None:intergenic	35.0%
!	AACTGTTTGGAACTCTTGAA+GGG	+	chr7_3:54722333-54722352	None:intergenic	35.0%
!	TAACTGTTTGGAACTCTTGA+AGG	+	chr7_3:54722334-54722353	None:intergenic	35.0%
	GAACTGACTGAATAACTGTT+TGG	+	chr7_3:54722346-54722365	None:intergenic	35.0%
!!	TGTGCTTTTTGCAGTGTAAT+TGG	-	chr7_3:54722449-54722468	Msa1110120:intron	35.0%
	GGAGCCACAATAATATCAAT+TGG	-	chr7_3:54722470-54722489	Msa1110120:intron	35.0%
!!	GGGTTTTATACAGTAATGTG+GGG	-	chr7_3:54722491-54722510	Msa1110120:intron	35.0%
	CATGTGTGACTATAAAGACA+AGG	-	chr7_3:54722956-54722975	Msa1110120:CDS	35.0%
!!	TCTACTGTACAAAGGCATTT+GGG	-	chr7_3:54722993-54723012	Msa1110120:CDS	35.0%
!	TTTGTTGTCTTCTTTGCATG+TGG	+	chr7_3:54723042-54723061	None:intergenic	35.0%
	CAGCTATAATGCTTACACAT+AGG	+	chr7_3:54721507-54721526	None:intergenic	35.0%
	CTATGTGTAAGCATTATAGC+TGG	-	chr7_3:54721505-54721524	Msa1110120:three_prime_UTR	35.0%
	AGCATTATAGCTGGAATTGT+AGG	-	chr7_3:54721514-54721533	Msa1110120:three_prime_UTR	35.0%
!	ATTTTCCATGCACTTGCATT+TGG	+	chr7_3:54721553-54721572	None:intergenic	35.0%
	AATGCAAGTGCATGGAAAAT+AGG	-	chr7_3:54721553-54721572	Msa1110120:three_prime_UTR	35.0%
	TGCATATGTGCTACGTATAA+AGG	-	chr7_3:54721726-54721745	Msa1110120:three_prime_UTR	35.0%
	GCATATGTGCTACGTATAAA+GGG	-	chr7_3:54721727-54721746	Msa1110120:three_prime_UTR	35.0%
	CATATGTGCTACGTATAAAG+GGG	-	chr7_3:54721728-54721747	Msa1110120:three_prime_UTR	35.0%
	ATATGTGCTACGTATAAAGG+GGG	-	chr7_3:54721729-54721748	Msa1110120:three_prime_UTR	35.0%
	GTAAATCATAGTACCTTCCA+AGG	+	chr7_3:54721837-54721856	None:intergenic	35.0%
	TCGGAGATTGTTGAATCAAT+AGG	-	chr7_3:54721974-54721993	Msa1110120:CDS	35.0%
	CGGAGATTGTTGAATCAATA+GGG	-	chr7_3:54721975-54721994	Msa1110120:CDS	35.0%
	AGTCTGGTAAATGATTGTTC+TGG	+	chr7_3:54722023-54722042	None:intergenic	35.0%
!!	AAACGGTTTTGATAATCCAG+GGG	+	chr7_3:54722065-54722084	None:intergenic	35.0%
!!	GAAACGGTTTTGATAATCCA+GGG	+	chr7_3:54722066-54722085	None:intergenic	35.0%
!!	AGAAACGGTTTTGATAATCC+AGG	+	chr7_3:54722067-54722086	None:intergenic	35.0%
	AAAACCGTTTCTCATGAGAA+CGG	-	chr7_3:54722075-54722094	Msa1110120:intron	35.0%
	TGATTAATGAGCCTCAACTA+AGG	-	chr7_3:54722144-54722163	Msa1110120:intron	35.0%
	TCAAGAACCAAGTAAAGTCT+TGG	+	chr7_3:54722222-54722241	None:intergenic	35.0%
	CTCTTAACCTTTCGATTCAT+CGG	+	chr7_3:54722277-54722296	None:intergenic	35.0%
!	AACTGTTTGGAACTCTTGAA+GGG	+	chr7_3:54722333-54722352	None:intergenic	35.0%
!	TAACTGTTTGGAACTCTTGA+AGG	+	chr7_3:54722334-54722353	None:intergenic	35.0%
	GAACTGACTGAATAACTGTT+TGG	+	chr7_3:54722346-54722365	None:intergenic	35.0%
!!	TGTGCTTTTTGCAGTGTAAT+TGG	-	chr7_3:54722449-54722468	Msa1110120:intron	35.0%
	GGAGCCACAATAATATCAAT+TGG	-	chr7_3:54722470-54722489	Msa1110120:intron	35.0%
!!	GGGTTTTATACAGTAATGTG+GGG	-	chr7_3:54722491-54722510	Msa1110120:intron	35.0%
	CATGTGTGACTATAAAGACA+AGG	-	chr7_3:54722956-54722975	Msa1110120:CDS	35.0%
!!	TCTACTGTACAAAGGCATTT+GGG	-	chr7_3:54722993-54723012	Msa1110120:CDS	35.0%
!	TTTGTTGTCTTCTTTGCATG+TGG	+	chr7_3:54723042-54723061	None:intergenic	35.0%
	ATGTTTATCCTACCGAGCAA+AGG	+	chr7_3:54721603-54721622	None:intergenic	40.0%
	ACAGCAATGACAATTGAGAG+TGG	+	chr7_3:54721778-54721797	None:intergenic	40.0%
	ACTCTCAATTGTCATTGCTG+TGG	-	chr7_3:54721777-54721796	Msa1110120:three_prime_UTR	40.0%
	AATTGTCATTGCTGTGGCTA+TGG	-	chr7_3:54721783-54721802	Msa1110120:three_prime_UTR	40.0%
	ATTGTCATTGCTGTGGCTAT+GGG	-	chr7_3:54721784-54721803	Msa1110120:three_prime_UTR	40.0%
	AATCATAGTACCTTCCAAGG+TGG	+	chr7_3:54721834-54721853	None:intergenic	40.0%
!	GGTAAATGATTGTTCTGGCT+AGG	+	chr7_3:54722018-54722037	None:intergenic	40.0%
	ATTTCCTCCGATGAATCGAA+AGG	-	chr7_3:54722267-54722286	Msa1110120:intron	40.0%
	TTAACCTTTCGATTCATCGG+AGG	+	chr7_3:54722274-54722293	None:intergenic	40.0%
!	GTTTCATAGCTTTGCAAGAG+AGG	+	chr7_3:54722581-54722600	None:intergenic	40.0%
	ATACTCTGCTGATACGAACA+AGG	+	chr7_3:54722779-54722798	None:intergenic	40.0%
	AAGTAGCAACTTCTGCAAGT+TGG	-	chr7_3:54722918-54722937	Msa1110120:intron	40.0%
	AGTAGCAACTTCTGCAAGTT+GGG	-	chr7_3:54722919-54722938	Msa1110120:intron	40.0%
!!	GTCTACTGTACAAAGGCATT+TGG	-	chr7_3:54722992-54723011	Msa1110120:CDS	40.0%
	ATGTTTATCCTACCGAGCAA+AGG	+	chr7_3:54721603-54721622	None:intergenic	40.0%
	ACAGCAATGACAATTGAGAG+TGG	+	chr7_3:54721778-54721797	None:intergenic	40.0%
	ACTCTCAATTGTCATTGCTG+TGG	-	chr7_3:54721777-54721796	Msa1110120:three_prime_UTR	40.0%
	AATTGTCATTGCTGTGGCTA+TGG	-	chr7_3:54721783-54721802	Msa1110120:three_prime_UTR	40.0%
	ATTGTCATTGCTGTGGCTAT+GGG	-	chr7_3:54721784-54721803	Msa1110120:three_prime_UTR	40.0%
	AATCATAGTACCTTCCAAGG+TGG	+	chr7_3:54721834-54721853	None:intergenic	40.0%
!	GGTAAATGATTGTTCTGGCT+AGG	+	chr7_3:54722018-54722037	None:intergenic	40.0%
	ATTTCCTCCGATGAATCGAA+AGG	-	chr7_3:54722267-54722286	Msa1110120:intron	40.0%
	TTAACCTTTCGATTCATCGG+AGG	+	chr7_3:54722274-54722293	None:intergenic	40.0%
!	GTTTCATAGCTTTGCAAGAG+AGG	+	chr7_3:54722581-54722600	None:intergenic	40.0%
	ATACTCTGCTGATACGAACA+AGG	+	chr7_3:54722779-54722798	None:intergenic	40.0%
	AAGTAGCAACTTCTGCAAGT+TGG	-	chr7_3:54722918-54722937	Msa1110120:intron	40.0%
	AGTAGCAACTTCTGCAAGTT+GGG	-	chr7_3:54722919-54722938	Msa1110120:intron	40.0%
!!	GTCTACTGTACAAAGGCATT+TGG	-	chr7_3:54722992-54723011	Msa1110120:CDS	40.0%
	ACTTGCTTCCATCCTTTGCT+CGG	-	chr7_3:54721588-54721607	Msa1110120:three_prime_UTR	45.0%
	TTATCCTACCGAGCAAAGGA+TGG	+	chr7_3:54721599-54721618	None:intergenic	45.0%
	CTATGGGAGTTGTGTTCCTT+GGG	-	chr7_3:54721800-54721819	Msa1110120:three_prime_UTR	45.0%
	TATGGGAGTTGTGTTCCTTG+GGG	-	chr7_3:54721801-54721820	Msa1110120:three_prime_UTR	45.0%
	GTCACAAGGCAAGTAAAGTC+TGG	+	chr7_3:54722039-54722058	None:intergenic	45.0%
!!	GGTTTTGATAATCCAGGGGT+CGG	+	chr7_3:54722061-54722080	None:intergenic	45.0%
	GTGGGGTAAAGCAAAAGAAG+AGG	-	chr7_3:54722508-54722527	Msa1110120:intron	45.0%
	GGGTAAAGCAAAAGAAGAGG+TGG	-	chr7_3:54722511-54722530	Msa1110120:intron	45.0%
!	AGCAGAGTATCTACCCATCT+AGG	-	chr7_3:54722789-54722808	Msa1110120:CDS	45.0%
!	GCAGAGTATCTACCCATCTA+GGG	-	chr7_3:54722790-54722809	Msa1110120:CDS	45.0%
	TATCTACCCATCTAGGGACT+AGG	-	chr7_3:54722796-54722815	Msa1110120:CDS	45.0%
	ATCTACCCATCTAGGGACTA+GGG	-	chr7_3:54722797-54722816	Msa1110120:CDS	45.0%
	GTAGCAACTTCTGCAAGTTG+GGG	-	chr7_3:54722920-54722939	Msa1110120:intron	45.0%
!	TAGCAACTTCTGCAAGTTGG+GGG	-	chr7_3:54722921-54722940	Msa1110120:intron	45.0%
	ACTTGCTTCCATCCTTTGCT+CGG	-	chr7_3:54721588-54721607	Msa1110120:three_prime_UTR	45.0%
	TTATCCTACCGAGCAAAGGA+TGG	+	chr7_3:54721599-54721618	None:intergenic	45.0%
	CTATGGGAGTTGTGTTCCTT+GGG	-	chr7_3:54721800-54721819	Msa1110120:three_prime_UTR	45.0%
	TATGGGAGTTGTGTTCCTTG+GGG	-	chr7_3:54721801-54721820	Msa1110120:three_prime_UTR	45.0%
	GTCACAAGGCAAGTAAAGTC+TGG	+	chr7_3:54722039-54722058	None:intergenic	45.0%
!!	GGTTTTGATAATCCAGGGGT+CGG	+	chr7_3:54722061-54722080	None:intergenic	45.0%
	GTGGGGTAAAGCAAAAGAAG+AGG	-	chr7_3:54722508-54722527	Msa1110120:intron	45.0%
	GGGTAAAGCAAAAGAAGAGG+TGG	-	chr7_3:54722511-54722530	Msa1110120:intron	45.0%
!	AGCAGAGTATCTACCCATCT+AGG	-	chr7_3:54722789-54722808	Msa1110120:CDS	45.0%
!	GCAGAGTATCTACCCATCTA+GGG	-	chr7_3:54722790-54722809	Msa1110120:CDS	45.0%
	TATCTACCCATCTAGGGACT+AGG	-	chr7_3:54722796-54722815	Msa1110120:CDS	45.0%
	ATCTACCCATCTAGGGACTA+GGG	-	chr7_3:54722797-54722816	Msa1110120:CDS	45.0%
	GTAGCAACTTCTGCAAGTTG+GGG	-	chr7_3:54722920-54722939	Msa1110120:intron	45.0%
!	TAGCAACTTCTGCAAGTTGG+GGG	-	chr7_3:54722921-54722940	Msa1110120:intron	45.0%
	GTGAGCCAAATGCAAGTGCA+TGG	-	chr7_3:54721545-54721564	Msa1110120:three_prime_UTR	50.0%
	GCTATGGGAGTTGTGTTCCT+TGG	-	chr7_3:54721799-54721818	Msa1110120:three_prime_UTR	50.0%
	ACCGTTTCTCATGAGAACGG+AGG	-	chr7_3:54722078-54722097	Msa1110120:intron	50.0%
	CCCTCCGTTCTCATGAGAAA+CGG	+	chr7_3:54722082-54722101	None:intergenic	50.0%
	CCGTTTCTCATGAGAACGGA+GGG	-	chr7_3:54722079-54722098	Msa1110120:intron	50.0%
	GAGGTGGTTGAAGATGTCTC+TGG	-	chr7_3:54722527-54722546	Msa1110120:intron	50.0%
	TGTCTCCCTAGTCCCTAGAT+GGG	+	chr7_3:54722805-54722824	None:intergenic	50.0%
	ATGTCTCCCTAGTCCCTAGA+TGG	+	chr7_3:54722806-54722825	None:intergenic	50.0%
	GTGAGCCAAATGCAAGTGCA+TGG	-	chr7_3:54721545-54721564	Msa1110120:three_prime_UTR	50.0%
	GCTATGGGAGTTGTGTTCCT+TGG	-	chr7_3:54721799-54721818	Msa1110120:three_prime_UTR	50.0%
	ACCGTTTCTCATGAGAACGG+AGG	-	chr7_3:54722078-54722097	Msa1110120:intron	50.0%
	CCCTCCGTTCTCATGAGAAA+CGG	+	chr7_3:54722082-54722101	None:intergenic	50.0%
	CCGTTTCTCATGAGAACGGA+GGG	-	chr7_3:54722079-54722098	Msa1110120:intron	50.0%
	GAGGTGGTTGAAGATGTCTC+TGG	-	chr7_3:54722527-54722546	Msa1110120:intron	50.0%
	TGTCTCCCTAGTCCCTAGAT+GGG	+	chr7_3:54722805-54722824	None:intergenic	50.0%
	ATGTCTCCCTAGTCCCTAGA+TGG	+	chr7_3:54722806-54722825	None:intergenic	50.0%
	GCTTCCATCCTTTGCTCGGT+AGG	-	chr7_3:54721592-54721611	Msa1110120:three_prime_UTR	55.0%
!!	CAAGGTGGAGAGTATCCCCA+AGG	+	chr7_3:54721819-54721838	None:intergenic	55.0%
	CTTGGGGATACTCTCCACCT+TGG	-	chr7_3:54721817-54721836	Msa1110120:three_prime_UTR	55.0%
	GGGATACTCTCCACCTTGGA+AGG	-	chr7_3:54721821-54721840	Msa1110120:three_prime_UTR	55.0%
	TAATCCAGGGGTCGGTCACA+AGG	+	chr7_3:54722053-54722072	None:intergenic	55.0%
	GCTTCCATCCTTTGCTCGGT+AGG	-	chr7_3:54721592-54721611	Msa1110120:three_prime_UTR	55.0%
!!	CAAGGTGGAGAGTATCCCCA+AGG	+	chr7_3:54721819-54721838	None:intergenic	55.0%
	CTTGGGGATACTCTCCACCT+TGG	-	chr7_3:54721817-54721836	Msa1110120:three_prime_UTR	55.0%
	GGGATACTCTCCACCTTGGA+AGG	-	chr7_3:54721821-54721840	Msa1110120:three_prime_UTR	55.0%
	TAATCCAGGGGTCGGTCACA+AGG	+	chr7_3:54722053-54722072	None:intergenic	55.0%
	CTTGCCTTGTGACCGACCCC+TGG	-	chr7_3:54722046-54722065	Msa1110120:CDS	65.0%
	CTTGCCTTGTGACCGACCCC+TGG	-	chr7_3:54722046-54722065	Msa1110120:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_3	gene	54721436	54723115	54721436	ID=Msa1110120;Name=Msa1110120
chr7_3	mRNA	54721436	54723115	54721436	ID=Msa1110120-mRNA-1;Parent=Msa1110120;Name=Msa1110120-mRNA-1;_AED=0.04;_eAED=0.04;_QI=24\|1\|1\|1\|1\|1\|3\|478\|158
chr7_3	exon	54721436	54722088	54721436	ID=Msa1110120-mRNA-1:exon:11551;Parent=Msa1110120-mRNA-1
chr7_3	exon	54722709	54722860	54722709	ID=Msa1110120-mRNA-1:exon:11550;Parent=Msa1110120-mRNA-1
chr7_3	exon	54722942	54723115	54722942	ID=Msa1110120-mRNA-1:exon:11549;Parent=Msa1110120-mRNA-1
chr7_3	five_prime_UTR	54723092	54723115	54723092	ID=Msa1110120-mRNA-1:five_prime_utr;Parent=Msa1110120-mRNA-1
chr7_3	CDS	54722942	54723091	54722942	ID=Msa1110120-mRNA-1:cds;Parent=Msa1110120-mRNA-1
chr7_3	CDS	54722709	54722860	54722709	ID=Msa1110120-mRNA-1:cds;Parent=Msa1110120-mRNA-1
chr7_3	CDS	54721914	54722088	54721914	ID=Msa1110120-mRNA-1:cds;Parent=Msa1110120-mRNA-1
chr7_3	three_prime_UTR	54721436	54721913	54721436	ID=Msa1110120-mRNA-1:three_prime_utr;Parent=Msa1110120-mRNA-1

Gene Sequence

>Msa1110120

ATGAAGGTGTATCCAAATGAACTAACAGTGATCTTCTATTACAACCTATGTGTAAGCATTATAGCTGGAATTGTAGGTGTGATTAGTGAGCCAAATGCAAGTGCATGGAAAATAGGACTTGATACATCACTTGCTTCCATCCTTTGCTCGGGAATTTTTGGATCATTCTTGAACAATACAGTTCATGCATATGTGCTACGTATAAAGGGGGCTGTATATGTTGCAATGTTCAAACCACTCTCAATTGTCATTGCTGTGGCTATGGGAGTTGTGTTCCTTGGGGATACTCTCCACCTTGGAAGTGTAATTGGAGCCACAATAATATCAATTGGGTTTTATACAGTAATGTGGGGTAAAGCAAAAGAAGAGGTGGTTGAAGATGTCTCTGGCGACGAAACACAAACTACACAGACTGTTCCTCTCTTGCAAAGCTATGAAACTGATAGACTACAAAAGAAAATGGATGCAAATGTATAA

Protein sequence

>Msa1110120

MKVYPNELTVIFYYNLCVSIIAGIVGVISEPNASAWKIGLDTSLASILCSGIFGSFLNNTVHAYVLRIKGAVYVAMFKPLSIVIAVAMGVVFLGDTLHLGSVIGATIISIGFYTVMWGKAKEEVVEDVSGDETQTTQTVPLLQSYETDRLQKKMDANV*