Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0530730 | XP_013454671.1 | 95.200 | 125 | 6 | 0 | 1 | 125 | 1 | 125 | 1.46e-79 | 244 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0530730 | sp|Q9FFY3|LTG30_ARATH | 53.448 | 116 | 48 | 2 | 10 | 119 | 7 | 122 | 1.24e-36 | 128 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0530730 | A0A072UG85 | 95.200 | 125 | 6 | 0 | 1 | 125 | 1 | 125 | 6.96e-80 | 244 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0009640 | Msa0530730 | 0.809008 | 2.339495e-50 | -8.615850e-47 |
| Msa0051960 | Msa0530730 | 0.815351 | 9.664068e-52 | -8.615850e-47 |
| Msa0060710 | Msa0530730 | -0.818473 | 1.925135e-52 | -8.615850e-47 |
| Msa0061220 | Msa0530730 | 0.833979 | 3.906826e-56 | -8.615850e-47 |
| Msa0077370 | Msa0530730 | 0.839903 | 1.199608e-57 | -8.615850e-47 |
| Msa0095940 | Msa0530730 | 0.833940 | 3.995670e-56 | -8.615850e-47 |
| Msa0097570 | Msa0530730 | 0.803313 | 3.699855e-49 | -8.615850e-47 |
| Msa0101960 | Msa0530730 | 0.833482 | 5.201256e-56 | -8.615850e-47 |
| Msa0112550 | Msa0530730 | -0.800907 | 1.156498e-48 | -8.615850e-47 |
| Msa0113370 | Msa0530730 | -0.808588 | 2.877516e-50 | -8.615850e-47 |
| Msa0189600 | Msa0530730 | 0.806954 | 6.401641e-50 | -8.615850e-47 |
| Msa0370580 | Msa0530730 | -0.805688 | 1.183271e-49 | -8.615850e-47 |
| Msa0403470 | Msa0530730 | -0.830888 | 2.277938e-55 | -8.615850e-47 |
| Msa0241480 | Msa0530730 | 0.804189 | 2.434353e-49 | -8.615850e-47 |
| Msa0271540 | Msa0530730 | 0.819144 | 1.355328e-52 | -8.615850e-47 |
| Msa0319260 | Msa0530730 | 0.833785 | 4.367699e-56 | -8.615850e-47 |
| Msa0319270 | Msa0530730 | 0.808388 | 3.173869e-50 | -8.615850e-47 |
| Msa0345050 | Msa0530730 | 0.811911 | 5.525318e-51 | -8.615850e-47 |
| Msa0529000 | Msa0530730 | 0.854681 | 1.046896e-61 | -8.615850e-47 |
| Msa0530730 | Msa0534610 | 0.806692 | 7.269013e-50 | -8.615850e-47 |
| Msa0530730 | Msa0535400 | 0.827395 | 1.602315e-54 | -8.615850e-47 |
| Msa0530730 | Msa0545050 | 0.828279 | 9.818498e-55 | -8.615850e-47 |
| Msa0530730 | Msa0574930 | 0.808951 | 2.406354e-50 | -8.615850e-47 |
| Msa0530730 | Msa0584600 | 0.808975 | 2.377662e-50 | -8.615850e-47 |
| Msa0530730 | Msa0587120 | 0.839015 | 2.040341e-57 | -8.615850e-47 |
| Msa0530730 | Msa0587560 | 0.839070 | 1.973751e-57 | -8.615850e-47 |
| Msa0530730 | Msa0588710 | 0.814823 | 1.265769e-51 | -8.615850e-47 |
| Msa0530730 | Msa0600590 | 0.828522 | 8.581884e-55 | -8.615850e-47 |
| Msa0530730 | Msa0641130 | 0.833071 | 6.582418e-56 | -8.615850e-47 |
| Msa0530730 | Msa0654640 | 0.801055 | 1.078290e-48 | -8.615850e-47 |
| Msa0530730 | Msa0693750 | 0.814104 | 1.826079e-51 | -8.615850e-47 |
| Msa0530730 | Msa0715670 | 0.822558 | 2.221577e-53 | -8.615850e-47 |
| Msa0530730 | Msa0719900 | -0.814174 | 1.762160e-51 | -8.615850e-47 |
| Msa0530730 | Msa0744640 | 0.836726 | 7.902853e-57 | -8.615850e-47 |
| Msa0530730 | Msa0833270 | 0.840254 | 9.715725e-58 | -8.615850e-47 |
| Msa0530730 | Msa0841730 | 0.837332 | 5.532605e-57 | -8.615850e-47 |
| Msa0530730 | Msa0862620 | 0.807664 | 4.526639e-50 | -8.615850e-47 |
| Msa0530730 | Msa0863990 | 0.805946 | 1.044369e-49 | -8.615850e-47 |
| Msa0530730 | Msa0873910 | 0.821402 | 4.115827e-53 | -8.615850e-47 |
| Msa0530730 | Msa0882480 | -0.807531 | 4.830357e-50 | -8.615850e-47 |
| Msa0530730 | Msa0906660 | 0.813129 | 2.992832e-51 | -8.615850e-47 |
| Msa0530730 | Msa0968470 | -0.807684 | 4.482350e-50 | -8.615850e-47 |
| Msa0530730 | Msa1008370 | 0.805776 | 1.133553e-49 | -8.615850e-47 |
| Msa0530730 | Msa1011250 | 0.801854 | 7.398854e-49 | -8.615850e-47 |
| Msa0530730 | Msa1031460 | 0.825405 | 4.773827e-54 | -8.615850e-47 |
| Msa0530730 | Msa1058200 | 0.802076 | 6.661401e-49 | -8.615850e-47 |
| Msa0530730 | Msa1058950 | 0.800592 | 1.340915e-48 | -8.615850e-47 |
| Msa0530730 | Msa1070540 | 0.824219 | 9.085245e-54 | -8.615850e-47 |
| Msa0530730 | Msa1074200 | 0.804720 | 1.886649e-49 | -8.615850e-47 |
| Msa0530730 | Msa1080610 | -0.802502 | 5.441409e-49 | -8.615850e-47 |
| Msa0530730 | Msa1080680 | -0.803269 | 3.777963e-49 | -8.615850e-47 |
| Msa0530730 | Msa1101240 | 0.829989 | 3.780891e-55 | -8.615850e-47 |
| Msa0530730 | Msa1116840 | 0.801848 | 7.419914e-49 | -8.615850e-47 |
| Msa0530730 | Msa1126320 | -0.806769 | 7.001929e-50 | -8.615850e-47 |
| Msa0530730 | Msa1131430 | 0.802720 | 4.906481e-49 | -8.615850e-47 |
| Msa0530730 | Msa1159170 | 0.805915 | 1.060171e-49 | -8.615850e-47 |
| Msa0530730 | Msa1167150 | -0.808004 | 3.832549e-50 | -8.615850e-47 |
| Msa0530730 | Msa1167310 | 0.805888 | 1.073813e-49 | -8.615850e-47 |
| Msa0530730 | Msa1173150 | 0.803372 | 3.597107e-49 | -8.615850e-47 |
| Msa0530730 | Msa1208450 | -0.804618 | 1.981043e-49 | -8.615850e-47 |
| Msa0530730 | Msa1208990 | 0.803887 | 2.813569e-49 | -8.615850e-47 |
| Msa0530730 | Msa1238600 | 0.829312 | 5.524550e-55 | -8.615850e-47 |
| Msa0530730 | Msa1238660 | 0.818130 | 2.301583e-52 | -8.615850e-47 |
| Msa0530730 | Msa1256060 | 0.833838 | 4.237067e-56 | -8.615850e-47 |
| Msa0530730 | Msa1289090 | 0.805091 | 1.577847e-49 | -8.615850e-47 |
| Msa0530730 | Msa1298390 | -0.809739 | 1.630178e-50 | -8.615850e-47 |
| Msa0530730 | Msa1319560 | 0.817684 | 2.902728e-52 | -8.615850e-47 |
| Msa0530730 | Msa1404050 | 0.822049 | 2.916104e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0530730 | MtrunA17_Chr4g0003641 | 95.200 | 125 | 6 | 0 | 1 | 125 | 1 | 125 | 1.34e-83 | 244 |
| Msa0530730 | MtrunA17_Chr4g0003631 | 95.745 | 94 | 4 | 0 | 126 | 219 | 13 | 106 | 1.20e-60 | 185 |
| Msa0530730 | MtrunA17_Chr2g0332771 | 57.547 | 106 | 33 | 2 | 126 | 219 | 13 | 118 | 3.40e-32 | 113 |
| Msa0530730 | MtrunA17_Chr4g0063471 | 52.439 | 82 | 27 | 4 | 126 | 206 | 13 | 83 | 3.73e-17 | 73.9 |
| Msa0530730 | MtrunA17_Chr4g0056621 | 34.951 | 103 | 60 | 4 | 5 | 104 | 4 | 102 | 1.39e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0530730 | AT5G13900.1 | 53.448 | 116 | 48 | 2 | 10 | 119 | 7 | 122 | 1.26e-37 | 128 |
| Msa0530730 | AT1G80180.1 | 39.231 | 130 | 39 | 6 | 126 | 219 | 13 | 138 | 3.52e-16 | 72.8 |
| Msa0530730 | AT5G20100.1 | 46.591 | 88 | 43 | 2 | 126 | 209 | 12 | 99 | 3.62e-16 | 72.0 |
| Msa0530730 | AT1G15400.2 | 37.500 | 120 | 41 | 6 | 126 | 216 | 13 | 127 | 1.24e-12 | 63.5 |
| Msa0530730 | AT1G15400.3 | 37.500 | 120 | 41 | 6 | 126 | 216 | 13 | 127 | 1.46e-12 | 63.5 |
| Msa0530730 | AT1G15400.1 | 37.500 | 120 | 41 | 6 | 126 | 216 | 13 | 127 | 1.59e-12 | 63.2 |
| Msa0530730 | AT4G14815.1 | 34.711 | 121 | 67 | 6 | 8 | 121 | 5 | 120 | 5.88e-11 | 59.3 |
Find 56 sgRNAs with CRISPR-Local
Find 416 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGTTCATCTGGTCTTGTT+TGG | 0.224185 | 4_1:-4800508 | Msa0530730:CDS |
| CGAGTTGCTATCTGAGTTCT+TGG | 0.265872 | 4_1:+4806558 | None:intergenic |
| CTTAATTGCATTTATTGTAT+TGG | 0.309709 | 4_1:-4807353 | Msa0530730:CDS |
| AGGTTCATCTGGTCTTGTTT+GGG | 0.315565 | 4_1:-4800507 | Msa0530730:CDS |
| TGTGGATTCTGTAGCCCTTT+TGG | 0.323362 | 4_1:-4800296 | Msa0530730:CDS |
| CTACCTCGACCGACGTTTAC+CGG | 0.339840 | 4_1:+4800250 | None:intergenic |
| TGGGATGACAGATTCTTATC+AGG | 0.348639 | 4_1:-4800488 | Msa0530730:CDS |
| CTATCTGAGTTCTTGGAGCC+AGG | 0.368930 | 4_1:+4806565 | None:intergenic |
| GGAGACGGTGGTTCGATCGC+TGG | 0.391781 | 4_1:+4800332 | None:intergenic |
| AAGGGATCACAACAGCTATC+AGG | 0.414943 | 4_1:+4807238 | None:intergenic |
| AGTGATGCTCAGAGTTTGCC+TGG | 0.428622 | 4_1:-4807124 | Msa0530730:CDS |
| TTCAGAAGATCAGGTTCATC+TGG | 0.432719 | 4_1:-4800518 | Msa0530730:intron |
| GAAGTATCATTCAGAAGATC+AGG | 0.445781 | 4_1:-4800527 | Msa0530730:intron |
| AGAAGCCATTCCACCGGTGC+TGG | 0.447002 | 4_1:-4800383 | Msa0530730:CDS |
| GGTGGAATGGCTTCTTTGTA+CGG | 0.453050 | 4_1:+4800391 | None:intergenic |
| CCAGGACATGTTCATCAACT+TGG | 0.453194 | 4_1:+4806531 | None:intergenic |
| TTGGTAACATTGGTCTCAAA+AGG | 0.456282 | 4_1:-4807334 | Msa0530730:CDS |
| GAGACGGTGGTTCGATCGCT+GGG | 0.462717 | 4_1:+4800333 | None:intergenic |
| ATATTCAATCATAGATTTCA+AGG | 0.465789 | 4_1:+4807219 | None:intergenic |
| TGTGTTATTTCAGATTCCCC+TGG | 0.490364 | 4_1:-4806583 | Msa0530730:intron |
| TGTAGCTTGGTAAGTAATAG+AGG | 0.492623 | 4_1:-4807181 | Msa0530730:CDS |
| CTCGTCCAGCACCGGTGGAA+TGG | 0.498060 | 4_1:+4800378 | None:intergenic |
| TCTCCGAAGGTTTCTGCGTG+TGG | 0.512115 | 4_1:-4800314 | Msa0530730:CDS |
| CATTCCACCGGTGCTGGACG+AGG | 0.514080 | 4_1:-4800377 | Msa0530730:CDS |
| ATTTATTGTATTGGTAACAT+TGG | 0.522078 | 4_1:-4807344 | Msa0530730:CDS |
| TACCTCGACCGACGTTTACC+GGG | 0.526089 | 4_1:+4800251 | None:intergenic |
| AATCCACACGCAGAAACCTT+CGG | 0.536395 | 4_1:+4800311 | None:intergenic |
| ACAAGACAAGCTGAGAAAGC+TGG | 0.539901 | 4_1:-4807157 | Msa0530730:CDS |
| TGCAAGATGCTTATGTAGCT+TGG | 0.552421 | 4_1:-4807194 | Msa0530730:CDS |
| TATCTGAGTTCTTGGAGCCA+GGG | 0.555866 | 4_1:+4806566 | None:intergenic |
| CAGAGTTTGCCTGGGAGATG+TGG | 0.558352 | 4_1:-4807115 | Msa0530730:CDS |
| CTTGTTTAAACTACCTCAGT+GGG | 0.561020 | 4_1:-4807273 | Msa0530730:CDS |
| ACGGTATCCTCGTCCAGCAC+CGG | 0.568784 | 4_1:+4800370 | None:intergenic |
| AGCCCGGTAAACGTCGGTCG+AGG | 0.570758 | 4_1:-4800253 | Msa0530730:CDS |
| ATCTGAGTTCTTGGAGCCAG+GGG | 0.576023 | 4_1:+4806567 | None:intergenic |
| CACGCAGAAACCTTCGGAGA+CGG | 0.583247 | 4_1:+4800317 | None:intergenic |
| TATTCAATCATAGATTTCAA+GGG | 0.591962 | 4_1:+4807220 | None:intergenic |
| ATAAATGCAATTAAGCAAAG+TGG | 0.596891 | 4_1:+4807361 | None:intergenic |
| AAGGGTCAACGATCAAAGCC+CGG | 0.598386 | 4_1:-4800269 | Msa0530730:CDS |
| ACATGCTGACCACATCTCCC+AGG | 0.601458 | 4_1:+4807106 | None:intergenic |
| GATCGAACCACCGTCTCCGA+AGG | 0.606120 | 4_1:-4800327 | Msa0530730:CDS |
| CGGTAAACGTCGGTCGAGGT+AGG | 0.609038 | 4_1:-4800249 | None:intergenic |
| GGAATGGCTTCTTTGTACGG+TGG | 0.613872 | 4_1:+4800394 | None:intergenic |
| CCACTGAGGTAGTTTAAACA+AGG | 0.617736 | 4_1:+4807274 | None:intergenic |
| AGAAGGAAATCATACTTGAG+AGG | 0.620662 | 4_1:+4807068 | None:intergenic |
| GTGATGCTCAGAGTTTGCCT+GGG | 0.622268 | 4_1:-4807123 | Msa0530730:CDS |
| GTATCCTCGTCCAGCACCGG+TGG | 0.623334 | 4_1:+4800373 | None:intergenic |
| CAAGAACTCAGATAGCAACT+CGG | 0.638659 | 4_1:-4806557 | Msa0530730:CDS |
| ATACTTGAGAGGCATGACAA+TGG | 0.643563 | 4_1:+4807079 | None:intergenic |
| GGATCACAACAGCTATCAGG+TGG | 0.647561 | 4_1:+4807241 | None:intergenic |
| GCTGGACGAGGATACCGTAC+CGG | 0.652103 | 4_1:-4800365 | Msa0530730:CDS |
| CCTTGTTTAAACTACCTCAG+TGG | 0.655484 | 4_1:-4807274 | Msa0530730:CDS |
| GCAGAAACCTTCGGAGACGG+TGG | 0.660406 | 4_1:+4800320 | None:intergenic |
| AGACGGTGGTTCGATCGCTG+GGG | 0.689604 | 4_1:+4800334 | None:intergenic |
| GTACAAAGAAGCCATTCCAC+CGG | 0.692582 | 4_1:-4800389 | Msa0530730:CDS |
| GATCAAAGCCCGGTAAACGT+CGG | 0.721418 | 4_1:-4800259 | Msa0530730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTAAAAGATAAATACA+AGG | + | chr4_1:4801539-4801558 | None:intergenic | 10.0% |
| !!! | AAATATAAAGTTTTAAGTTT+GGG | + | chr4_1:4802216-4802235 | None:intergenic | 10.0% |
| !!! | AAAATATAAAGTTTTAAGTT+TGG | + | chr4_1:4802217-4802236 | None:intergenic | 10.0% |
| !! | GTTATTTATATAATTTGAAT+GGG | + | chr4_1:4802739-4802758 | None:intergenic | 10.0% |
| !! | AGTTATTTATATAATTTGAA+TGG | + | chr4_1:4802740-4802759 | None:intergenic | 10.0% |
| !!! | AATATATAAATTTTCAAGTT+CGG | - | chr4_1:4802782-4802801 | Msa0530730:intron | 10.0% |
| !! | AAAATAATGTATTATGTAAA+AGG | - | chr4_1:4803166-4803185 | Msa0530730:intron | 10.0% |
| !! | AAATAATGTATTATGTAAAA+GGG | - | chr4_1:4803167-4803186 | Msa0530730:intron | 10.0% |
| !! | TATTAATAAAAGGTTAAAAT+TGG | + | chr4_1:4803463-4803482 | None:intergenic | 10.0% |
| !!! | TTATTAAAATAAAAAGTGTT+TGG | + | chr4_1:4803872-4803891 | None:intergenic | 10.0% |
| !! | GAAATTAAAAAAAAATTGTA+GGG | + | chr4_1:4804158-4804177 | None:intergenic | 10.0% |
| !! | TGAAATTAAAAAAAAATTGT+AGG | + | chr4_1:4804159-4804178 | None:intergenic | 10.0% |
| !!! | TTAATCATGTTTTTTAAATT+TGG | + | chr4_1:4805504-4805523 | None:intergenic | 10.0% |
| !!! | GTTTTTTAATTTATGTTTTT+AGG | + | chr4_1:4806168-4806187 | None:intergenic | 10.0% |
| !! | AATAAAGTAATAAATAGTAA+GGG | - | chr4_1:4806188-4806207 | Msa0530730:intron | 10.0% |
| !! | AATAACATAGATTTATTTAA+GGG | + | chr4_1:4806647-4806666 | None:intergenic | 10.0% |
| !! | AAATAACATAGATTTATTTA+AGG | + | chr4_1:4806648-4806667 | None:intergenic | 10.0% |
| !! | GGTAAATTTAAAAAATAATG+AGG | - | chr4_1:4800715-4800734 | Msa0530730:intron | 15.0% |
| !!! | ATATTTTTTTTTCATTGTTG+TGG | - | chr4_1:4801741-4801760 | Msa0530730:intron | 15.0% |
| !!! | AATATAAAGTTTTAAGTTTG+GGG | + | chr4_1:4802215-4802234 | None:intergenic | 15.0% |
| !!! | ATATATAAATTTTCAAGTTC+GGG | - | chr4_1:4802783-4802802 | Msa0530730:intron | 15.0% |
| !!! | TACATTATTTTCAATTGATT+AGG | + | chr4_1:4803157-4803176 | None:intergenic | 15.0% |
| !! | TCATAAATACATTTATCATT+TGG | - | chr4_1:4803705-4803724 | Msa0530730:intron | 15.0% |
| !! | CATAAATACATTTATCATTT+GGG | - | chr4_1:4803706-4803725 | Msa0530730:intron | 15.0% |
| !! | TAAATATAAAATGACGTAAA+AGG | + | chr4_1:4803824-4803843 | None:intergenic | 15.0% |
| !!! | AGTCCATATTTTTTAATTTA+GGG | + | chr4_1:4804011-4804030 | None:intergenic | 15.0% |
| !!! | AAGTCCATATTTTTTAATTT+AGG | + | chr4_1:4804012-4804031 | None:intergenic | 15.0% |
| !! | ACAAAAATATCCTTTATTAA+TGG | - | chr4_1:4804320-4804339 | Msa0530730:intron | 15.0% |
| !! | TATTGTAAAATGACATAATT+TGG | - | chr4_1:4804432-4804451 | Msa0530730:intron | 15.0% |
| !! | ATTGTAAAATGACATAATTT+GGG | - | chr4_1:4804433-4804452 | Msa0530730:intron | 15.0% |
| !! | TAAAATGACATAATTTAAGA+CGG | - | chr4_1:4804471-4804490 | Msa0530730:intron | 15.0% |
| !! | AATTAATTGTCATTGATATA+AGG | + | chr4_1:4804765-4804784 | None:intergenic | 15.0% |
| !! | GATCAACTATAATTATATTA+CGG | - | chr4_1:4805126-4805145 | Msa0530730:intron | 15.0% |
| !! | TAGTAAATAATTTACTTTAG+AGG | + | chr4_1:4805159-4805178 | None:intergenic | 15.0% |
| !! | TTAATATACTGATAATATCA+TGG | + | chr4_1:4805712-4805731 | None:intergenic | 15.0% |
| !! | CAATAAAGTAATAAATAGTA+AGG | - | chr4_1:4806187-4806206 | Msa0530730:intron | 15.0% |
| !! | ATAAAGTAATAAATAGTAAG+GGG | - | chr4_1:4806189-4806208 | Msa0530730:intron | 15.0% |
| !!! | TAATTCAATAATTTTCAATG+TGG | - | chr4_1:4806231-4806250 | Msa0530730:intron | 15.0% |
| !!! | TATACTATGTTTTTTTTTTG+TGG | + | chr4_1:4806370-4806389 | None:intergenic | 15.0% |
| !! | CAAAAATAAAATAAATAGAG+AGG | + | chr4_1:4806451-4806470 | None:intergenic | 15.0% |
| !!! | CTCTATTTATTTTATTTTTG+AGG | - | chr4_1:4806451-4806470 | Msa0530730:intron | 15.0% |
| !!! | ATTTATTTTGTCAAATAAAG+AGG | + | chr4_1:4806484-4806503 | None:intergenic | 15.0% |
| !! | AAAATAGATAGTAAATTCTA+TGG | - | chr4_1:4806536-4806555 | Msa0530730:intron | 15.0% |
| !!! | CATAGATTAATTTATTGTTT+TGG | + | chr4_1:4806706-4806725 | None:intergenic | 15.0% |
| !! | TAAATTAATCTATGCTTAAT+TGG | - | chr4_1:4806712-4806731 | Msa0530730:intron | 15.0% |
| !! | CTTAATTGCATTTATTGTAT+TGG | - | chr4_1:4800276-4800295 | Msa0530730:CDS | 20.0% |
| !!! | ATTTATTGTATTGGTAACAT+TGG | - | chr4_1:4800285-4800304 | Msa0530730:CDS | 20.0% |
| !! | TATTCAATCATAGATTTCAA+GGG | + | chr4_1:4800412-4800431 | None:intergenic | 20.0% |
| !! | ATATTCAATCATAGATTTCA+AGG | + | chr4_1:4800413-4800432 | None:intergenic | 20.0% |
| !!! | TTAGTAGAAAGTATTATGAA+TGG | - | chr4_1:4800694-4800713 | Msa0530730:intron | 20.0% |
| !! | ATGCATCTAATTATATCTTA+TGG | + | chr4_1:4800791-4800810 | None:intergenic | 20.0% |
| !!! | AAGTAGAGATTCATATTTTT+AGG | + | chr4_1:4800953-4800972 | None:intergenic | 20.0% |
| !!! | AAGGAATTTTTGTTTTTAGT+GGG | + | chr4_1:4801287-4801306 | None:intergenic | 20.0% |
| !! | ATATTCATAAACGAGTAAAT+AGG | - | chr4_1:4802009-4802028 | Msa0530730:intron | 20.0% |
| !!! | ATTAAAGTTTTGTTAATGTC+AGG | + | chr4_1:4802074-4802093 | None:intergenic | 20.0% |
| !!! | TGACTAACATAAAATTTTGA+CGG | + | chr4_1:4802138-4802157 | None:intergenic | 20.0% |
| !!! | ATATAAAGTTTTAAGTTTGG+GGG | + | chr4_1:4802214-4802233 | None:intergenic | 20.0% |
| !!! | TATAAATAAGTTTTGAGTCA+AGG | + | chr4_1:4802248-4802267 | None:intergenic | 20.0% |
| !!! | TATAAATAACTTTTGAGTCA+AGG | - | chr4_1:4802749-4802768 | Msa0530730:intron | 20.0% |
| !!! | TATATAAATTTTCAAGTTCG+GGG | - | chr4_1:4802784-4802803 | Msa0530730:intron | 20.0% |
| !! | ACGAAATTTATAATTTCAGA+GGG | - | chr4_1:4802958-4802977 | Msa0530730:intron | 20.0% |
| !!! | ATCAATTGATTTAACATGAA+TGG | + | chr4_1:4803196-4803215 | None:intergenic | 20.0% |
| !!! | TAATCACTTAGCAATTTTTT+TGG | + | chr4_1:4803251-4803270 | None:intergenic | 20.0% |
| !!! | GTAGTTTTTTTTTTAAACGT+GGG | + | chr4_1:4803537-4803556 | None:intergenic | 20.0% |
| !! | GAAAATTTGAAAAAGATTGT+GGG | + | chr4_1:4803559-4803578 | None:intergenic | 20.0% |
| !! | AGAAAATTTGAAAAAGATTG+TGG | + | chr4_1:4803560-4803579 | None:intergenic | 20.0% |
| !!! | TTTTAATAAGCTAACTTTTC+AGG | - | chr4_1:4803883-4803902 | Msa0530730:intron | 20.0% |
| !! | ACACCCTAAATTAAAAAATA+TGG | - | chr4_1:4804005-4804024 | Msa0530730:intron | 20.0% |
| !! | AATATCCTTTATTAATGGTA+TGG | - | chr4_1:4804325-4804344 | Msa0530730:intron | 20.0% |
| !! | ATATCCTTTATTAATGGTAT+GGG | - | chr4_1:4804326-4804345 | Msa0530730:intron | 20.0% |
| !! | GGAAAATAAATCAAAAGAAT+TGG | - | chr4_1:4804347-4804366 | Msa0530730:intron | 20.0% |
| !! | GAAAAAGATAGAGTAATAAA+TGG | - | chr4_1:4804369-4804388 | Msa0530730:intron | 20.0% |
| !! | TGAATTCCTAAAATACATAT+AGG | - | chr4_1:4805191-4805210 | Msa0530730:intron | 20.0% |
| !! | ACATCATCAAACATAATAAA+AGG | + | chr4_1:4805297-4805316 | None:intergenic | 20.0% |
| !!! | ATCTAAATTTGAAACAAACA+AGG | + | chr4_1:4805594-4805613 | None:intergenic | 20.0% |
| !!! | CCTTTCTTTTTTACAATTTT+GGG | + | chr4_1:4805648-4805667 | None:intergenic | 20.0% |
| !!! | TCCTTTCTTTTTTACAATTT+TGG | + | chr4_1:4805649-4805668 | None:intergenic | 20.0% |
| !!! | TCTTTTTAATAGCAAATGTT+AGG | - | chr4_1:4806132-4806151 | Msa0530730:intron | 20.0% |
| !! | AAATAGATAGATATAACTCT+AGG | + | chr4_1:4806893-4806912 | None:intergenic | 20.0% |
| !! | ATATATTTATATAGAGAGAG+AGG | - | chr4_1:4807004-4807023 | Msa0530730:intron | 20.0% |
| !! | TATATTTATATAGAGAGAGA+GGG | - | chr4_1:4807005-4807024 | Msa0530730:intron | 20.0% |
| ! | ATAAATGCAATTAAGCAAAG+TGG | + | chr4_1:4800271-4800290 | None:intergenic | 25.0% |
| ! | ACAAAAATTGGACTAAAAGA+AGG | + | chr4_1:4800581-4800600 | None:intergenic | 25.0% |
| ! | CATGGTAAGTTAACAAAAAT+TGG | + | chr4_1:4800593-4800612 | None:intergenic | 25.0% |
| ! | AAAATTAGGGATAGATAACA+TGG | + | chr4_1:4800611-4800630 | None:intergenic | 25.0% |
| ! | ACTATTATACACATGTTATC+AGG | - | chr4_1:4801148-4801167 | Msa0530730:intron | 25.0% |
| ! | CTATTATACACATGTTATCA+GGG | - | chr4_1:4801149-4801168 | Msa0530730:intron | 25.0% |
| !!! | GAAGGAATTTTTGTTTTTAG+TGG | + | chr4_1:4801288-4801307 | None:intergenic | 25.0% |
| !!! | CTAGATGACTCAATTTTAAT+AGG | + | chr4_1:4801416-4801435 | None:intergenic | 25.0% |
| !! | GAAATTGCATGTTATTTGAT+TGG | - | chr4_1:4801789-4801808 | Msa0530730:intron | 25.0% |
| ! | GACAAAACGAAATTAAAAGA+CGG | - | chr4_1:4801936-4801955 | Msa0530730:intron | 25.0% |
| ! | AAGAAACTTACAATTTCAAG+GGG | + | chr4_1:4802041-4802060 | None:intergenic | 25.0% |
| ! | GAAGAAACTTACAATTTCAA+GGG | + | chr4_1:4802042-4802061 | None:intergenic | 25.0% |
| ! | TGAAGAAACTTACAATTTCA+AGG | + | chr4_1:4802043-4802062 | None:intergenic | 25.0% |
| !!! | TAACATAAAATTTTGACGGA+GGG | + | chr4_1:4802134-4802153 | None:intergenic | 25.0% |
| !!! | TATAAAGTTTTAAGTTTGGG+GGG | + | chr4_1:4802213-4802232 | None:intergenic | 25.0% |
| !!! | TGTTTGAATTTTAGTTTGTC+AGG | + | chr4_1:4802344-4802363 | None:intergenic | 25.0% |
| ! | GACAAACTAAAATTCAAACA+TGG | - | chr4_1:4802344-4802363 | Msa0530730:intron | 25.0% |
| ! | TTTGTAAAGTGCATAAGTAA+AGG | + | chr4_1:4802375-4802394 | None:intergenic | 25.0% |
| !!! | ATTTTGGTATACTGATCATA+TGG | - | chr4_1:4802442-4802461 | Msa0530730:intron | 25.0% |
| !! | TTTTGGTATACTGATCATAT+GGG | - | chr4_1:4802443-4802462 | Msa0530730:intron | 25.0% |
| !! | TATACGTACTTTTCAAATCT+AGG | - | chr4_1:4802497-4802516 | Msa0530730:intron | 25.0% |
| ! | TAAAGAACTCAAAGGATTAA+AGG | - | chr4_1:4802560-4802579 | Msa0530730:intron | 25.0% |
| ! | AAGGATTAAAGGCTTATATT+TGG | - | chr4_1:4802571-4802590 | Msa0530730:intron | 25.0% |
| !!! | ATATAAATTTTCAAGTTCGG+GGG | - | chr4_1:4802785-4802804 | Msa0530730:intron | 25.0% |
| ! | TGACTAACAGAAAAATTTGA+CGG | - | chr4_1:4802862-4802881 | Msa0530730:intron | 25.0% |
| !!! | ATTGAAGTTTTGTTAATGTC+AGG | - | chr4_1:4802926-4802945 | Msa0530730:intron | 25.0% |
| !!! | TTGAAGTTTTGTTAATGTCA+GGG | - | chr4_1:4802927-4802946 | Msa0530730:intron | 25.0% |
| ! | GACGAAATTTATAATTTCAG+AGG | - | chr4_1:4802957-4802976 | Msa0530730:intron | 25.0% |
| ! | CGAAATTTATAATTTCAGAG+GGG | - | chr4_1:4802959-4802978 | Msa0530730:intron | 25.0% |
| ! | TCGTTTATGAATGAGTAAAT+AGG | + | chr4_1:4802991-4803010 | None:intergenic | 25.0% |
| !!! | GGTAGTTTTTTTTTTAAACG+TGG | + | chr4_1:4803538-4803557 | None:intergenic | 25.0% |
| !!! | TTTTTAATTTAGGGTGTGTT+TGG | + | chr4_1:4804002-4804021 | None:intergenic | 25.0% |
| ! | TTTCAGTGATAAAATTCGAA+AGG | - | chr4_1:4804102-4804121 | Msa0530730:intron | 25.0% |
| ! | TTTAATATTGCATAACTCAC+AGG | - | chr4_1:4804223-4804242 | Msa0530730:intron | 25.0% |
| !! | TTTTCCCATACCATTAATAA+AGG | + | chr4_1:4804333-4804352 | None:intergenic | 25.0% |
| ! | AGATAGAGTAATAAATGGTA+AGG | - | chr4_1:4804374-4804393 | Msa0530730:intron | 25.0% |
| ! | GATAGAGTAATAAATGGTAA+GGG | - | chr4_1:4804375-4804394 | Msa0530730:intron | 25.0% |
| !!! | GTCATTTTAGCAAAATATGT+TGG | + | chr4_1:4804460-4804479 | None:intergenic | 25.0% |
| ! | CTTAAATTCTTTATGCATGA+GGG | - | chr4_1:4804681-4804700 | Msa0530730:intron | 25.0% |
| !! | GTGAGAAAAGTAATTTTCAT+AGG | + | chr4_1:4804724-4804743 | None:intergenic | 25.0% |
| !!! | ACCGATTTTAAAAGTTTTAG+CGG | + | chr4_1:4804820-4804839 | None:intergenic | 25.0% |
| !!! | CAGTTCAATCATTTTTAAGT+CGG | + | chr4_1:4804847-4804866 | None:intergenic | 25.0% |
| !!! | CAGTTCAATCATTTTTAAGT+CGG | + | chr4_1:4804847-4804866 | None:intergenic | 25.0% |
| ! | CTAAAATACATATAGGTCTT+GGG | - | chr4_1:4805198-4805217 | Msa0530730:intron | 25.0% |
| ! | TAAAATACATATAGGTCTTG+GGG | - | chr4_1:4805199-4805218 | Msa0530730:intron | 25.0% |
| !!! | AATTTTTAATTGGTTTCCGT+AGG | + | chr4_1:4805268-4805287 | None:intergenic | 25.0% |
| !! | AAGGTTGCTCAATTTTTAAT+TGG | + | chr4_1:4805278-4805297 | None:intergenic | 25.0% |
| ! | CTATCTTGAATGATTAATGT+TGG | - | chr4_1:4805398-4805417 | Msa0530730:intron | 25.0% |
| ! | AGAAGAAGTGAAAGAATAAA+TGG | + | chr4_1:4805459-4805478 | None:intergenic | 25.0% |
| ! | CCCAAAATTGTAAAAAAGAA+AGG | - | chr4_1:4805645-4805664 | Msa0530730:intron | 25.0% |
| ! | CAGTCAATATAAATCATCTT+GGG | + | chr4_1:4805796-4805815 | None:intergenic | 25.0% |
| ! | ATAGATGTGAAAATTATGCA+TGG | + | chr4_1:4805923-4805942 | None:intergenic | 25.0% |
| ! | CATAAAATATACAAAGTCTG+AGG | - | chr4_1:4806329-4806348 | Msa0530730:intron | 25.0% |
| !!! | ACTATGTTTTTTTTTTGTGG+TGG | + | chr4_1:4806367-4806386 | None:intergenic | 25.0% |
| ! | ACACAAGTGATAGATATTTA+AGG | - | chr4_1:4806390-4806409 | Msa0530730:intron | 25.0% |
| !!! | AAAATCCACTATCGTTTTTT+GGG | + | chr4_1:4806565-4806584 | None:intergenic | 25.0% |
| !!! | TAAAATCCACTATCGTTTTT+TGG | + | chr4_1:4806566-4806585 | None:intergenic | 25.0% |
| !! | ATCTATGTTATTTGTCTTAG+TGG | - | chr4_1:4806655-4806674 | Msa0530730:intron | 25.0% |
| !! | TAACATGTAAACACGTTTTA+TGG | + | chr4_1:4806772-4806791 | None:intergenic | 25.0% |
| ! | TGTTATTGTTCACACATATA+CGG | - | chr4_1:4806787-4806806 | Msa0530730:intron | 25.0% |
| AATTAGACATCGAGTAGATA+AGG | + | chr4_1:4800752-4800771 | None:intergenic | 30.0% | |
| !!! | TTTTTTTAGACCCATGTCTT+GGG | + | chr4_1:4801231-4801250 | None:intergenic | 30.0% |
| !!! | TTTTTTTTAGACCCATGTCT+TGG | + | chr4_1:4801232-4801251 | None:intergenic | 30.0% |
| AGAGGAAACGGAAATTAAAT+CGG | + | chr4_1:4801374-4801393 | None:intergenic | 30.0% | |
| !!! | AAATTGAGTCATCTAGCTTT+TGG | - | chr4_1:4801420-4801439 | Msa0530730:intron | 30.0% |
| !!! | TGTTAGGTGAGTGTTTTTTT+GGG | - | chr4_1:4801443-4801462 | Msa0530730:intron | 30.0% |
| ATTATAAGTCGTTAGGTTCA+GGG | + | chr4_1:4801655-4801674 | None:intergenic | 30.0% | |
| AATTATAAGTCGTTAGGTTC+AGG | + | chr4_1:4801656-4801675 | None:intergenic | 30.0% | |
| CACTACAATTATAAGTCGTT+AGG | + | chr4_1:4801662-4801681 | None:intergenic | 30.0% | |
| TAGAAGTAACTCCAAATTGA+GGG | - | chr4_1:4801878-4801897 | Msa0530730:intron | 30.0% | |
| ! | TTTTTCTTCAACCCTCAATT+TGG | + | chr4_1:4801892-4801911 | None:intergenic | 30.0% |
| GGTTGAAGAAAAAATTGAAG+TGG | - | chr4_1:4801899-4801918 | Msa0530730:intron | 30.0% | |
| !!! | AAAGTTTTGTTAATGTCAGG+AGG | + | chr4_1:4802071-4802090 | None:intergenic | 30.0% |
| ATTAACGTTGTGCAATTTCA+GGG | + | chr4_1:4802898-4802917 | None:intergenic | 30.0% | |
| !! | AACATAAAATTTTGACGGAG+GGG | + | chr4_1:4802133-4802152 | None:intergenic | 30.0% |
| !! | CTAACATAAAATTTTGACGG+AGG | + | chr4_1:4802135-4802154 | None:intergenic | 30.0% |
| AGCTATACATAAAATGCACA+AGG | - | chr4_1:4802284-4802303 | Msa0530730:intron | 30.0% | |
| ! | TCAGATCAGAAACAGAATTT+TGG | - | chr4_1:4802426-4802445 | Msa0530730:intron | 30.0% |
| TTACTTAGTTCAGCAAGTAT+GGG | + | chr4_1:4802543-4802562 | None:intergenic | 30.0% | |
| TTTACTTAGTTCAGCAAGTA+TGG | + | chr4_1:4802544-4802563 | None:intergenic | 30.0% | |
| GAACTAAGTAAAGAACTCAA+AGG | - | chr4_1:4802552-4802571 | Msa0530730:intron | 30.0% | |
| !!! | TGGTCTTAAGCTATTTTTGA+AGG | - | chr4_1:4802591-4802610 | Msa0530730:intron | 30.0% |
| GTAACAATGTCTACATAACA+AGG | + | chr4_1:4802668-4802687 | None:intergenic | 30.0% | |
| TAACAGAAAAATTTGACGGA+AGG | - | chr4_1:4802866-4802885 | Msa0530730:intron | 30.0% | |
| AACAGAAAAATTTGACGGAA+GGG | - | chr4_1:4802867-4802886 | Msa0530730:intron | 30.0% | |
| ATTAACGTTGTGCAATTTCA+GGG | - | chr4_1:4802898-4802917 | Msa0530730:intron | 30.0% | |
| !!! | TGAAGTTTTGTTAATGTCAG+GGG | - | chr4_1:4802928-4802947 | Msa0530730:intron | 30.0% |
| TGTGTTTGGATATACGTTTA+CGG | - | chr4_1:4803019-4803038 | Msa0530730:intron | 30.0% | |
| TTTCTTGACAAACACATGTT+TGG | - | chr4_1:4803103-4803122 | Msa0530730:intron | 30.0% | |
| AAGTGATTAGTGTGATTCTA+AGG | - | chr4_1:4803262-4803281 | Msa0530730:intron | 30.0% | |
| AATATGGACTTCGATTTCAA+CGG | - | chr4_1:4804021-4804040 | Msa0530730:intron | 30.0% | |
| ! | GTAACTTTAGCTATTTCACA+TGG | - | chr4_1:4804245-4804264 | Msa0530730:intron | 30.0% |
| ! | ATGACATAATTTAAGACGGA+TGG | - | chr4_1:4804475-4804494 | Msa0530730:intron | 30.0% |
| ! | TGACATAATTTAAGACGGAT+GGG | - | chr4_1:4804476-4804495 | Msa0530730:intron | 30.0% |
| AAAAACAACTGATCGAGATT+AGG | + | chr4_1:4804556-4804575 | None:intergenic | 30.0% | |
| ATCTAGTCCTTTAACCATAT+TGG | - | chr4_1:4804656-4804675 | Msa0530730:intron | 30.0% | |
| TCTAGTCCTTTAACCATATT+GGG | - | chr4_1:4804657-4804676 | Msa0530730:intron | 30.0% | |
| ! | AAAGAATTTAAGGCCCAATA+TGG | + | chr4_1:4804673-4804692 | None:intergenic | 30.0% |
| CCTCATGCATAAAGAATTTA+AGG | + | chr4_1:4804683-4804702 | None:intergenic | 30.0% | |
| CCTTAAATTCTTTATGCATG+AGG | - | chr4_1:4804680-4804699 | Msa0530730:intron | 30.0% | |
| !!! | GCCGCTAAAACTTTTAAAAT+CGG | - | chr4_1:4804816-4804835 | Msa0530730:intron | 30.0% |
| !! | ACCGATTTTAAAAGTTTCAG+CGG | + | chr4_1:4804910-4804929 | None:intergenic | 30.0% |
| TGTCACTGAAAAATGCTAAA+CGG | - | chr4_1:4804984-4805003 | Msa0530730:intron | 30.0% | |
| ! | GATTAACTACGGTTGATATA+AGG | - | chr4_1:4805008-4805027 | Msa0530730:intron | 30.0% |
| ! | CCAAGACCTATATGTATTTT+AGG | + | chr4_1:4805200-4805219 | None:intergenic | 30.0% |
| CCTAAAATACATATAGGTCT+TGG | - | chr4_1:4805197-4805216 | Msa0530730:intron | 30.0% | |
| AAAATACATATAGGTCTTGG+GGG | - | chr4_1:4805200-4805219 | Msa0530730:intron | 30.0% | |
| ATGGATGGAACATTCAAAAA+TGG | + | chr4_1:4805226-4805245 | None:intergenic | 30.0% | |
| TTGTACCAAAAAGACAAAGT+TGG | - | chr4_1:4805429-4805448 | Msa0530730:intron | 30.0% | |
| TCCACAAACGTATAAGAAAA+TGG | + | chr4_1:4805536-4805555 | None:intergenic | 30.0% | |
| GATAATATCATGGAGCATAA+GGG | + | chr4_1:4805702-4805721 | None:intergenic | 30.0% | |
| TGATAATATCATGGAGCATA+AGG | + | chr4_1:4805703-4805722 | None:intergenic | 30.0% | |
| !! | CCATTTCTAGACTTTTCTTT+TGG | + | chr4_1:4805752-4805771 | None:intergenic | 30.0% |
| CCAAAAGAAAAGTCTAGAAA+TGG | - | chr4_1:4805749-4805768 | Msa0530730:intron | 30.0% | |
| GCAGTCAATATAAATCATCT+TGG | + | chr4_1:4805797-4805816 | None:intergenic | 30.0% | |
| GGTTAATGTGTAATAGGAAA+TGG | + | chr4_1:4805843-4805862 | None:intergenic | 30.0% | |
| TGCATGGTATTAGTAGAAAA+TGG | + | chr4_1:4805907-4805926 | None:intergenic | 30.0% | |
| ! | AGTAAGGGGTATAATAGAAA+AGG | - | chr4_1:4806203-4806222 | Msa0530730:intron | 30.0% |
| ! | GTAAGGGGTATAATAGAAAA+GGG | - | chr4_1:4806204-4806223 | Msa0530730:intron | 30.0% |
| !!! | TTTTTTTTTTGTGGTGGTCA+GGG | + | chr4_1:4806361-4806380 | None:intergenic | 30.0% |
| TGATAGATATTTAAGGAGCT+AGG | - | chr4_1:4806397-4806416 | Msa0530730:intron | 30.0% | |
| !!! | TAGGATCCTCTCTATTTTTA+AGG | - | chr4_1:4806416-4806435 | Msa0530730:intron | 30.0% |
| GAAAAACATATATCGAGAGA+AGG | - | chr4_1:4806617-4806636 | Msa0530730:intron | 30.0% | |
| CACGTCAAATATAACAAACT+CGG | - | chr4_1:4806948-4806967 | Msa0530730:intron | 30.0% | |
| ! | TTGGTAACATTGGTCTCAAA+AGG | - | chr4_1:4800295-4800314 | Msa0530730:CDS | 35.0% |
| CTTGTTTAAACTACCTCAGT+GGG | - | chr4_1:4800356-4800375 | Msa0530730:CDS | 35.0% | |
| TGTAGCTTGGTAAGTAATAG+AGG | - | chr4_1:4800448-4800467 | Msa0530730:CDS | 35.0% | |
| AGAAGGAAATCATACTTGAG+AGG | + | chr4_1:4800564-4800583 | None:intergenic | 35.0% | |
| TGAAATCATCATAACTAGCC+AGG | + | chr4_1:4801119-4801138 | None:intergenic | 35.0% | |
| TTAAATCGGGGAAGAAGAAA+AGG | + | chr4_1:4801360-4801379 | None:intergenic | 35.0% | |
| AGGAAACGGAAATTAAATCG+GGG | + | chr4_1:4801372-4801391 | None:intergenic | 35.0% | |
| GAGGAAACGGAAATTAAATC+GGG | + | chr4_1:4801373-4801392 | None:intergenic | 35.0% | |
| CTAAAACAAGACAACAGAAG+AGG | + | chr4_1:4801392-4801411 | None:intergenic | 35.0% | |
| !!! | CTCTTCTGTTGTCTTGTTTT+AGG | - | chr4_1:4801390-4801409 | Msa0530730:intron | 35.0% |
| !!! | GTGTTAGGTGAGTGTTTTTT+TGG | - | chr4_1:4801442-4801461 | Msa0530730:intron | 35.0% |
| ! | TTTGAGGTTCCTCATGTATA+CGG | - | chr4_1:4801473-4801492 | Msa0530730:intron | 35.0% |
| AAATCACTACCGTATACATG+AGG | + | chr4_1:4801485-4801504 | None:intergenic | 35.0% | |
| ! | ACGGTAGTGATTTTCATCTT+TGG | - | chr4_1:4801492-4801511 | Msa0530730:intron | 35.0% |
| ! | CGGTAGTGATTTTCATCTTT+GGG | - | chr4_1:4801493-4801512 | Msa0530730:intron | 35.0% |
| ATGTGTTGCAGAAAATGTTG+AGG | - | chr4_1:4801685-4801704 | Msa0530730:intron | 35.0% | |
| TGTGTTGCAGAAAATGTTGA+GGG | - | chr4_1:4801686-4801705 | Msa0530730:intron | 35.0% | |
| !!! | TTTTTTTCATTGTTGTGGCC+TGG | - | chr4_1:4801746-4801765 | Msa0530730:intron | 35.0% |
| GTTTGAACATCTTATATGCC+AGG | + | chr4_1:4801767-4801786 | None:intergenic | 35.0% | |
| GTAGAAGTAACTCCAAATTG+AGG | - | chr4_1:4801877-4801896 | Msa0530730:intron | 35.0% | |
| ! | ACGGTCAAATTTTGCAAGTA+CGG | - | chr4_1:4801955-4801974 | Msa0530730:intron | 35.0% |
| TTAACGTTGTGCAATTTCAG+GGG | + | chr4_1:4802899-4802918 | None:intergenic | 35.0% | |
| CATTAACGTTGTGCAATTTC+AGG | + | chr4_1:4802103-4802122 | None:intergenic | 35.0% | |
| !! | ACATAAAATTTTGACGGAGG+GGG | + | chr4_1:4802132-4802151 | None:intergenic | 35.0% |
| ACATAAGTGCAAAACTTCAG+GGG | + | chr4_1:4802817-4802836 | None:intergenic | 35.0% | |
| CACATAAGTGCAAAACTTCA+GGG | + | chr4_1:4802816-4802835 | None:intergenic | 35.0% | |
| ! | CTTTTCAAATCTAGGCAGAA+AGG | - | chr4_1:4802505-4802524 | Msa0530730:intron | 35.0% |
| CACATAAGTGCAAAACTTCA+GGG | - | chr4_1:4802816-4802835 | Msa0530730:intron | 35.0% | |
| ACATAAGTGCAAAACTTCAG+GGG | - | chr4_1:4802817-4802836 | Msa0530730:intron | 35.0% | |
| ACAGAAAAATTTGACGGAAG+GGG | - | chr4_1:4802868-4802887 | Msa0530730:intron | 35.0% | |
| GATTAACGTTGTGCAATTTC+AGG | - | chr4_1:4802897-4802916 | Msa0530730:intron | 35.0% | |
| TTAACGTTGTGCAATTTCAG+GGG | - | chr4_1:4802899-4802918 | Msa0530730:intron | 35.0% | |
| !!! | GAAGTTTTGTTAATGTCAGG+GGG | - | chr4_1:4802929-4802948 | Msa0530730:intron | 35.0% |
| AAACGAATGTCGTATGTGTT+TGG | - | chr4_1:4803005-4803024 | Msa0530730:intron | 35.0% | |
| TTTGATCATATCGTGTTTCG+AGG | - | chr4_1:4803042-4803061 | Msa0530730:intron | 35.0% | |
| ! | AAAGCTAGCTTATAGCTTCT+TGG | - | chr4_1:4803304-4803323 | Msa0530730:intron | 35.0% |
| AGATGAAAACGTGATGTGTT+TGG | - | chr4_1:4803346-4803365 | Msa0530730:intron | 35.0% | |
| GGGCAATTGAATAAGAATGT+GGG | + | chr4_1:4803517-4803536 | None:intergenic | 35.0% | |
| TGGGCAATTGAATAAGAATG+TGG | + | chr4_1:4803518-4803537 | None:intergenic | 35.0% | |
| GGTAAAATTAGCTGTTCAAG+TGG | + | chr4_1:4803851-4803870 | None:intergenic | 35.0% | |
| ! | GACATAATTTAAGACGGATG+GGG | - | chr4_1:4804477-4804496 | Msa0530730:intron | 35.0% |
| CTCATTTGGTTGAAAATCGT+CGG | + | chr4_1:4804609-4804628 | None:intergenic | 35.0% | |
| ! | CAACCAAATGAGCAATTTTG+AGG | - | chr4_1:4804617-4804636 | Msa0530730:intron | 35.0% |
| ACACCTCAAAATTGCTCATT+TGG | + | chr4_1:4804623-4804642 | None:intergenic | 35.0% | |
| TTAAGGCCCAATATGGTTAA+AGG | + | chr4_1:4804666-4804685 | None:intergenic | 35.0% | |
| CATAGGAGAAAGTTCCTAAA+AGG | + | chr4_1:4804707-4804726 | None:intergenic | 35.0% | |
| !!! | GCCGCTGAAACTTTTAAAAT+CGG | - | chr4_1:4804906-4804925 | Msa0530730:intron | 35.0% |
| ! | GTGAACCAACTTTGTCTTTT+TGG | + | chr4_1:4805437-4805456 | None:intergenic | 35.0% |
| !! | GCCATTTTCTTATACGTTTG+TGG | - | chr4_1:4805532-4805551 | Msa0530730:intron | 35.0% |
| ! | ATATCTAAGCACGCTTTGTT+TGG | + | chr4_1:4805559-4805578 | None:intergenic | 35.0% |
| ! | ACTTTTCTTTTGGTCGCATA+TGG | + | chr4_1:4805742-4805761 | None:intergenic | 35.0% |
| ATGGTCATGTATACATACCA+AGG | + | chr4_1:4805824-4805843 | None:intergenic | 35.0% | |
| AGGAGTGGTTAATGTGTAAT+AGG | + | chr4_1:4805849-4805868 | None:intergenic | 35.0% | |
| AAATGGAAGAGAAAGCTAGT+TGG | + | chr4_1:4805890-4805909 | None:intergenic | 35.0% | |
| ! | TGAGCTTAGTTCAGTTGATA+TGG | - | chr4_1:4806300-4806319 | Msa0530730:intron | 35.0% |
| !!! | GTTTTTTTTTTGTGGTGGTC+AGG | + | chr4_1:4806362-4806381 | None:intergenic | 35.0% |
| CTAGCTCCTTAAAAATAGAG+AGG | + | chr4_1:4806425-4806444 | None:intergenic | 35.0% | |
| !!! | CTCTCTATTTTTAAGGAGCT+AGG | - | chr4_1:4806423-4806442 | Msa0530730:intron | 35.0% |
| ATGTAGTACGCAATTTGAAG+AGG | - | chr4_1:4806502-4806521 | Msa0530730:intron | 35.0% | |
| TGTAGTACGCAATTTGAAGA+GGG | - | chr4_1:4806503-4806522 | Msa0530730:intron | 35.0% | |
| !!! | TAGTGGATTTTACCACTAAG+TGG | - | chr4_1:4806574-4806593 | Msa0530730:intron | 35.0% |
| !! | AGTGGATTTTACCACTAAGT+GGG | - | chr4_1:4806575-4806594 | Msa0530730:intron | 35.0% |
| GATAGATATAACTCTAGGTC+TGG | + | chr4_1:4806888-4806907 | None:intergenic | 35.0% | |
| ! | GAGCTATGTAGATGTTTCTA+GGG | + | chr4_1:4806979-4806998 | None:intergenic | 35.0% |
| AGAGCTATGTAGATGTTTCT+AGG | + | chr4_1:4806980-4806999 | None:intergenic | 35.0% | |
| ATTAGAGAGAGAGAACATCA+TGG | - | chr4_1:4807062-4807081 | Msa0530730:intron | 35.0% | |
| CTGAATGATACTTCAGATCT+TGG | + | chr4_1:4807096-4807115 | None:intergenic | 35.0% | |
| ! | GAAGTATCATTCAGAAGATC+AGG | - | chr4_1:4807102-4807121 | Msa0530730:CDS | 35.0% |
| ! | GGTTTTCACATGAAGTTCTT+TGG | + | chr4_1:4807217-4807236 | None:intergenic | 35.0% |
| !! | TGTAGCCCTTTTGGAAAAAA+GGG | - | chr4_1:4807342-4807361 | Msa0530730:CDS | 35.0% |
| !!! | GTTGACCCTTTTTTCCAAAA+GGG | + | chr4_1:4807350-4807369 | None:intergenic | 35.0% |
| CCACTGAGGTAGTTTAAACA+AGG | + | chr4_1:4800358-4800377 | None:intergenic | 40.0% | |
| ! | CCTTGTTTAAACTACCTCAG+TGG | - | chr4_1:4800355-4800374 | Msa0530730:CDS | 40.0% |
| TGCAAGATGCTTATGTAGCT+TGG | - | chr4_1:4800435-4800454 | Msa0530730:CDS | 40.0% | |
| ! | ATACTTGAGAGGCATGACAA+TGG | + | chr4_1:4800553-4800572 | None:intergenic | 40.0% |
| TATTCTATACCGTCGTCTGT+CGG | - | chr4_1:4800819-4800838 | Msa0530730:intron | 40.0% | |
| !! | TGTGTTATTTCAGATTCCCC+TGG | - | chr4_1:4801046-4801065 | Msa0530730:intron | 40.0% |
| CAAGAACTCAGATAGCAACT+CGG | - | chr4_1:4801072-4801091 | Msa0530730:intron | 40.0% | |
| TTCCATCACCATCATTCCAT+CGG | - | chr4_1:4801329-4801348 | Msa0530730:intron | 40.0% | |
| AGAAGAAAAGGAAAGTCCGA+TGG | + | chr4_1:4801348-4801367 | None:intergenic | 40.0% | |
| CAAGACAACAGAAGAGGAAA+CGG | + | chr4_1:4801386-4801405 | None:intergenic | 40.0% | |
| !!! | GTCATCTAGCTTTTGGTGTT+AGG | - | chr4_1:4801427-4801446 | Msa0530730:intron | 40.0% |
| !!! | TAGGTGAGTGTTTTTTTGGG+AGG | - | chr4_1:4801446-4801465 | Msa0530730:intron | 40.0% |
| !!! | AGGTGAGTGTTTTTTTGGGA+GGG | - | chr4_1:4801447-4801466 | Msa0530730:intron | 40.0% |
| TCGGCTCTGTAATTGAAAAG+AGG | + | chr4_1:4801615-4801634 | None:intergenic | 40.0% | |
| GTGTTGCAGAAAATGTTGAG+GGG | - | chr4_1:4801687-4801706 | Msa0530730:intron | 40.0% | |
| TACTTCTACTTCCACTCGAA+AGG | + | chr4_1:4801866-4801885 | None:intergenic | 40.0% | |
| TAACGTTGTGCAATTTCAGG+GGG | + | chr4_1:4802900-4802919 | None:intergenic | 40.0% | |
| ATAAGTGCAAAACTTCAGGG+GGG | + | chr4_1:4802819-4802838 | None:intergenic | 40.0% | |
| CATAAGTGCAAAACTTCAGG+GGG | + | chr4_1:4802818-4802837 | None:intergenic | 40.0% | |
| GCACATAAGTGCAAAACTTC+AGG | + | chr4_1:4802815-4802834 | None:intergenic | 40.0% | |
| ACTGATCATATGGGCATTCT+AGG | - | chr4_1:4802452-4802471 | Msa0530730:intron | 40.0% | |
| TATGGGCATTCTAGGTAGAA+AGG | - | chr4_1:4802460-4802479 | Msa0530730:intron | 40.0% | |
| ATGGGCATTCTAGGTAGAAA+GGG | - | chr4_1:4802461-4802480 | Msa0530730:intron | 40.0% | |
| GCTACTAACTTCTTCAGTAC+TGG | - | chr4_1:4802620-4802639 | Msa0530730:intron | 40.0% | |
| GTCTACATAACAAGGAACGA+GGG | + | chr4_1:4802660-4802679 | None:intergenic | 40.0% | |
| TGTCTACATAACAAGGAACG+AGG | + | chr4_1:4802661-4802680 | None:intergenic | 40.0% | |
| GCACATAAGTGCAAAACTTC+AGG | - | chr4_1:4802815-4802834 | Msa0530730:intron | 40.0% | |
| CATAAGTGCAAAACTTCAGG+GGG | - | chr4_1:4802818-4802837 | Msa0530730:intron | 40.0% | |
| TAACGTTGTGCAATTTCAGG+GGG | - | chr4_1:4802900-4802919 | Msa0530730:intron | 40.0% | |
| CAATTGATTAGGTGCTCGTT+AGG | + | chr4_1:4803146-4803165 | None:intergenic | 40.0% | |
| !! | TGTGATTCTAAGGCTGTGTT+TGG | - | chr4_1:4803272-4803291 | Msa0530730:intron | 40.0% |
| CACATTCTACACACTTGGTT+TGG | + | chr4_1:4804186-4804205 | None:intergenic | 40.0% | |
| CTTCTCACATTCTACACACT+TGG | + | chr4_1:4804191-4804210 | None:intergenic | 40.0% | |
| ! | TTTATGCATGAGGGCCTTTT+AGG | - | chr4_1:4804690-4804709 | Msa0530730:intron | 40.0% |
| TGCTAAACGGCGATTAACTA+CGG | - | chr4_1:4804997-4805016 | Msa0530730:intron | 40.0% | |
| GGAGCATAAGGGTTTCTTTA+TGG | + | chr4_1:4805691-4805710 | None:intergenic | 40.0% | |
| ! | TTATATTGACTGCATCGCCT+TGG | - | chr4_1:4805804-4805823 | Msa0530730:intron | 40.0% |
| GGTAACCCAAAAAACGATAG+TGG | - | chr4_1:4806557-4806576 | Msa0530730:CDS | 40.0% | |
| GTTATTCTGAACCCACTTAG+TGG | + | chr4_1:4806589-4806608 | None:intergenic | 40.0% | |
| TTTGTCTTAGTGGTCATGCA+TGG | - | chr4_1:4806665-4806684 | Msa0530730:intron | 40.0% | |
| TTCAGAAGATCAGGTTCATC+TGG | - | chr4_1:4807111-4807130 | Msa0530730:CDS | 40.0% | |
| !! | AGGTTCATCTGGTCTTGTTT+GGG | - | chr4_1:4807122-4807141 | Msa0530730:CDS | 40.0% |
| TGGGATGACAGATTCTTATC+AGG | - | chr4_1:4807141-4807160 | Msa0530730:CDS | 40.0% | |
| !! | CTGTAGCCCTTTTGGAAAAA+AGG | - | chr4_1:4807341-4807360 | Msa0530730:CDS | 40.0% |
| !!! | CGTTGACCCTTTTTTCCAAA+AGG | + | chr4_1:4807351-4807370 | None:intergenic | 40.0% |
| !!! | GTGGATTTTTAGTCCCACTG+AGG | + | chr4_1:4800372-4800391 | None:intergenic | 45.0% |
| AAGGGATCACAACAGCTATC+AGG | + | chr4_1:4800394-4800413 | None:intergenic | 45.0% | |
| ACAAGACAAGCTGAGAAAGC+TGG | - | chr4_1:4800472-4800491 | Msa0530730:CDS | 45.0% | |
| GATAATAGACCGACAGACGA+CGG | + | chr4_1:4800831-4800850 | None:intergenic | 45.0% | |
| TATCTGAGTTCTTGGAGCCA+GGG | + | chr4_1:4801066-4801085 | None:intergenic | 45.0% | |
| CGAGTTGCTATCTGAGTTCT+TGG | + | chr4_1:4801074-4801093 | None:intergenic | 45.0% | |
| CCAGGACATGTTCATCAACT+TGG | + | chr4_1:4801101-4801120 | None:intergenic | 45.0% | |
| !! | CCAAGTTGATGAACATGTCC+TGG | - | chr4_1:4801098-4801117 | Msa0530730:intron | 45.0% |
| TTATCAGGGCCAACCTAAAC+AGG | - | chr4_1:4801163-4801182 | Msa0530730:intron | 45.0% | |
| AAGGTCTAGCCTGTTTAGGT+TGG | + | chr4_1:4801175-4801194 | None:intergenic | 45.0% | |
| ACCTAAACAGGCTAGACCTT+AGG | - | chr4_1:4801175-4801194 | Msa0530730:intron | 45.0% | |
| CCTAAACAGGCTAGACCTTA+GGG | - | chr4_1:4801176-4801195 | Msa0530730:intron | 45.0% | |
| TGAGCTACTTGCATACCCTA+AGG | + | chr4_1:4801194-4801213 | None:intergenic | 45.0% | |
| AGGGTATGCAAGTAGCTCAA+TGG | - | chr4_1:4801195-4801214 | Msa0530730:intron | 45.0% | |
| ! | TTTTAGACCCATGTCTTGGG+AGG | + | chr4_1:4801228-4801247 | None:intergenic | 45.0% |
| AGGAAAGTCCGATGGAATGA+TGG | + | chr4_1:4801340-4801359 | None:intergenic | 45.0% | |
| !!! | TGAGTGTTTTTTTGGGAGGG+TGG | - | chr4_1:4801450-4801469 | Msa0530730:intron | 45.0% |
| !!! | TTTTTTGGGAGGGTGGTTTG+AGG | - | chr4_1:4801457-4801476 | Msa0530730:intron | 45.0% |
| ATCAGCTAGATCCTTTCGAG+TGG | - | chr4_1:4801852-4801871 | Msa0530730:intron | 45.0% | |
| AGTACGGATCATATGCCAAG+TGG | - | chr4_1:4801971-4801990 | Msa0530730:intron | 45.0% | |
| GCTAAGAATCTTGAGCCACT+TGG | + | chr4_1:4801989-4802008 | None:intergenic | 45.0% | |
| AACGTTGTGCAATTTCAGGG+GGG | + | chr4_1:4802901-4802920 | None:intergenic | 45.0% | |
| !! | TTCAGGGGGGTATTTGCAAA+AGG | + | chr4_1:4802167-4802186 | None:intergenic | 45.0% |
| TGGGCATTCTAGGTAGAAAG+GGG | - | chr4_1:4802462-4802481 | Msa0530730:intron | 45.0% | |
| ATCTAGGCAGAAAGGCAGAA+AGG | - | chr4_1:4802513-4802532 | Msa0530730:intron | 45.0% | |
| TCTAGGCAGAAAGGCAGAAA+GGG | - | chr4_1:4802514-4802533 | Msa0530730:intron | 45.0% | |
| ACAAGGAACGAGGGTTTGAA+AGG | + | chr4_1:4802651-4802670 | None:intergenic | 45.0% | |
| !! | TCAGGGGGAGTATTTGCAAA+AGG | - | chr4_1:4802833-4802852 | Msa0530730:intron | 45.0% |
| AACGTTGTGCAATTTCAGGG+GGG | - | chr4_1:4802901-4802920 | Msa0530730:intron | 45.0% | |
| TAGGTGCTCGTTAGGAACTT+GGG | + | chr4_1:4803138-4803157 | None:intergenic | 45.0% | |
| TTAGGTGCTCGTTAGGAACT+TGG | + | chr4_1:4803139-4803158 | None:intergenic | 45.0% | |
| AAAAGCTAGCTGGTAGCTGA+TGG | + | chr4_1:4803929-4803948 | None:intergenic | 45.0% | |
| CTGATAGCTGATAAGCTAGC+TGG | + | chr4_1:4803958-4803977 | None:intergenic | 45.0% | |
| CAAGACGAGCGAAAAAACAG+TGG | + | chr4_1:4804076-4804095 | None:intergenic | 45.0% | |
| !! | TGTCGCTCGACATTTTTCAG+CGG | - | chr4_1:4804784-4804803 | Msa0530730:intron | 45.0% |
| TGGAAGAGAAAGCTAGTTGG+CGG | + | chr4_1:4805887-4805906 | None:intergenic | 45.0% | |
| !! | CAGGTTCATCTGGTCTTGTT+TGG | - | chr4_1:4807121-4807140 | Msa0530730:CDS | 45.0% |
| GGTGGAATGGCTTCTTTGTA+CGG | + | chr4_1:4807241-4807260 | None:intergenic | 45.0% | |
| GTACAAAGAAGCCATTCCAC+CGG | - | chr4_1:4807240-4807259 | Msa0530730:CDS | 45.0% | |
| AATCCACACGCAGAAACCTT+CGG | + | chr4_1:4807321-4807340 | None:intergenic | 45.0% | |
| ! | TGTGGATTCTGTAGCCCTTT+TGG | - | chr4_1:4807333-4807352 | Msa0530730:CDS | 45.0% |
| !! | AACTTAAAAAAAAAAAATTA+GGG | + | chr4_1:4800624-4800643 | None:intergenic | 5.0% |
| !! | AAACTTAAAAAAAAAAAATT+AGG | + | chr4_1:4800625-4800644 | None:intergenic | 5.0% |
| !! | AATTAAACTATATTAATAAA+AGG | + | chr4_1:4803473-4803492 | None:intergenic | 5.0% |
| GGATCACAACAGCTATCAGG+TGG | + | chr4_1:4800391-4800410 | None:intergenic | 50.0% | |
| AGTGATGCTCAGAGTTTGCC+TGG | - | chr4_1:4800505-4800524 | Msa0530730:CDS | 50.0% | |
| GTGATGCTCAGAGTTTGCCT+GGG | - | chr4_1:4800506-4800525 | Msa0530730:CDS | 50.0% | |
| ATCTGAGTTCTTGGAGCCAG+GGG | + | chr4_1:4801065-4801084 | None:intergenic | 50.0% | |
| CTATCTGAGTTCTTGGAGCC+AGG | + | chr4_1:4801067-4801086 | None:intergenic | 50.0% | |
| CCCTAAGGTCTAGCCTGTTT+AGG | + | chr4_1:4801179-4801198 | None:intergenic | 50.0% | |
| TGCAAGTAGCTCAATGGAGC+CGG | - | chr4_1:4801201-4801220 | Msa0530730:intron | 50.0% | |
| GTACAGAGAGAAGGAGAGGA+AGG | + | chr4_1:4801306-4801325 | None:intergenic | 50.0% | |
| ATGGAACGCGTACAGAGAGA+AGG | + | chr4_1:4801315-4801334 | None:intergenic | 50.0% | |
| ! | GTCCGATGGAATGATGGTGA+TGG | + | chr4_1:4801334-4801353 | None:intergenic | 50.0% |
| CTAGGCAGAAAGGCAGAAAG+GGG | - | chr4_1:4802515-4802534 | Msa0530730:intron | 50.0% | |
| CTGGTAGCTGAAAAGCTAGC+TGG | + | chr4_1:4803939-4803958 | None:intergenic | 50.0% | |
| CGAGCGAAAAAACAGTGGAG+TGG | + | chr4_1:4804071-4804090 | None:intergenic | 50.0% | |
| GATCGAGATTAGGCTCGATC+AGG | + | chr4_1:4804546-4804565 | None:intergenic | 50.0% | |
| GTGAAGGAAACGAAGAGGAG+TGG | + | chr4_1:4805864-4805883 | None:intergenic | 50.0% | |
| GGAAGAGAAAGCTAGTTGGC+GGG | + | chr4_1:4805886-4805905 | None:intergenic | 50.0% | |
| GAGAGAGAGAACATCATGGC+TGG | - | chr4_1:4807066-4807085 | Msa0530730:intron | 50.0% | |
| GGAATGGCTTCTTTGTACGG+TGG | + | chr4_1:4807238-4807257 | None:intergenic | 50.0% | |
| AAGGGTCAACGATCAAAGCC+CGG | - | chr4_1:4807360-4807379 | Msa0530730:CDS | 50.0% | |
| GATCAAAGCCCGGTAAACGT+CGG | - | chr4_1:4807370-4807389 | Msa0530730:CDS | 50.0% | |
| CAGAGTTTGCCTGGGAGATG+TGG | - | chr4_1:4800514-4800533 | Msa0530730:CDS | 55.0% | |
| ACATGCTGACCACATCTCCC+AGG | + | chr4_1:4800526-4800545 | None:intergenic | 55.0% | |
| GCAAGTAGCTCAATGGAGCC+GGG | - | chr4_1:4801202-4801221 | Msa0530730:intron | 55.0% | |
| ACGCGTACAGAGAGAAGGAG+AGG | + | chr4_1:4801310-4801329 | None:intergenic | 55.0% | |
| TTCAGGGCCTACGAATCTGG+AGG | + | chr4_1:4801639-4801658 | None:intergenic | 55.0% | |
| AGGTTCAGGGCCTACGAATC+TGG | + | chr4_1:4801642-4801661 | None:intergenic | 55.0% | |
| ! | GAAAGCTAGTTGGCGGGTGA+AGG | + | chr4_1:4805880-4805899 | None:intergenic | 55.0% |
| ! | CTGGGGAGACTTTTCCGGTA+CGG | + | chr4_1:4807281-4807300 | None:intergenic | 55.0% |
| ! | GATCGCTGGGGAGACTTTTC+CGG | + | chr4_1:4807286-4807305 | None:intergenic | 55.0% |
| CACGCAGAAACCTTCGGAGA+CGG | + | chr4_1:4807315-4807334 | None:intergenic | 55.0% | |
| TCTCCGAAGGTTTCTGCGTG+TGG | - | chr4_1:4807315-4807334 | Msa0530730:CDS | 55.0% | |
| TACCTCGACCGACGTTTACC+GGG | + | chr4_1:4807381-4807400 | None:intergenic | 55.0% | |
| CTACCTCGACCGACGTTTAC+CGG | + | chr4_1:4807382-4807401 | None:intergenic | 55.0% | |
| AGCCGAGCCTCCAGATTCGT+AGG | - | chr4_1:4801629-4801648 | Msa0530730:intron | 60.0% | |
| GGCCTACGAATCTGGAGGCT+CGG | + | chr4_1:4801634-4801653 | None:intergenic | 60.0% | |
| GGCGGGTGAAGGAAACGAAG+AGG | + | chr4_1:4805869-4805888 | None:intergenic | 60.0% | |
| AGAAGCCATTCCACCGGTGC+TGG | - | chr4_1:4807246-4807265 | Msa0530730:CDS | 60.0% | |
| ACGGTATCCTCGTCCAGCAC+CGG | + | chr4_1:4807262-4807281 | None:intergenic | 60.0% | |
| GCTGGACGAGGATACCGTAC+CGG | - | chr4_1:4807264-4807283 | Msa0530730:CDS | 60.0% | |
| AGACGGTGGTTCGATCGCTG+GGG | + | chr4_1:4807298-4807317 | None:intergenic | 60.0% | |
| GAGACGGTGGTTCGATCGCT+GGG | + | chr4_1:4807299-4807318 | None:intergenic | 60.0% | |
| GATCGAACCACCGTCTCCGA+AGG | - | chr4_1:4807302-4807321 | Msa0530730:CDS | 60.0% | |
| GCAGAAACCTTCGGAGACGG+TGG | + | chr4_1:4807312-4807331 | None:intergenic | 60.0% | |
| AGCCGGGCCTCCCAAGACAT+GGG | - | chr4_1:4801218-4801237 | Msa0530730:intron | 65.0% | |
| GACCCATGTCTTGGGAGGCC+CGG | + | chr4_1:4801223-4801242 | None:intergenic | 65.0% | |
| !! | CTCGTCCAGCACCGGTGGAA+TGG | + | chr4_1:4807254-4807273 | None:intergenic | 65.0% |
| ! | CATTCCACCGGTGCTGGACG+AGG | - | chr4_1:4807252-4807271 | Msa0530730:CDS | 65.0% |
| ! | GTATCCTCGTCCAGCACCGG+TGG | + | chr4_1:4807259-4807278 | None:intergenic | 65.0% |
| GGAGACGGTGGTTCGATCGC+TGG | + | chr4_1:4807300-4807319 | None:intergenic | 65.0% | |
| AGCCCGGTAAACGTCGGTCG+AGG | - | chr4_1:4807376-4807395 | Msa0530730:CDS | 65.0% | |
| GAGCCGGGCCTCCCAAGACA+TGG | - | chr4_1:4801217-4801236 | Msa0530730:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 4800250 | 4807401 | 4800250 | ID=Msa0530730;Name=Msa0530730 |
| chr4_1 | mRNA | 4800250 | 4807401 | 4800250 | ID=Msa0530730-mRNA-1;Parent=Msa0530730;Name=Msa0530730-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|0.66|1|1|3|0|219 |
| chr4_1 | exon | 4807083 | 4807401 | 4807083 | ID=Msa0530730-mRNA-1:exon:1479;Parent=Msa0530730-mRNA-1 |
| chr4_1 | exon | 4806538 | 4806592 | 4806538 | ID=Msa0530730-mRNA-1:exon:1478;Parent=Msa0530730-mRNA-1 |
| chr4_1 | exon | 4800250 | 4800535 | 4800250 | ID=Msa0530730-mRNA-1:exon:1477;Parent=Msa0530730-mRNA-1 |
| chr4_1 | CDS | 4807083 | 4807401 | 4807083 | ID=Msa0530730-mRNA-1:cds;Parent=Msa0530730-mRNA-1 |
| chr4_1 | CDS | 4806538 | 4806592 | 4806538 | ID=Msa0530730-mRNA-1:cds;Parent=Msa0530730-mRNA-1 |
| chr4_1 | CDS | 4800250 | 4800535 | 4800250 | ID=Msa0530730-mRNA-1:cds;Parent=Msa0530730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
