AlfalfaGEDB | Msa0579160

M. sativa cultivar zhongmu-4 / Msa0579160

KEGG: K02437
GO: GO:0000166 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0008144 GO:0017076 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0097159 GO:0097367 GO:1901265 GO:1901363
PFAM: PF01597.22

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0579160	XP_003607890.1	98.065	155	3	0	1	155	1	155	1.12e-108	316

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0579160	sp\|O82179\|GCSH2_ARATH	78.205	156	33	1	1	155	1	156	2.76e-87	254

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0579160	Q2MGQ2	98.065	155	3	0	1	155	1	155	5.34e-109	316

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0022400	Msa0579160	0.836426	9.425543e-57	-8.615850e-47
Msa0033220	Msa0579160	0.851230	1.016400e-60	-8.615850e-47
Msa0044160	Msa0579160	0.821455	4.001544e-53	-8.615850e-47
Msa0044440	Msa0579160	0.839381	1.639931e-57	-8.615850e-47
Msa0044530	Msa0579160	-0.803949	2.730470e-49	-8.615850e-47
Msa0063940	Msa0579160	0.890650	8.131106e-74	-8.615850e-47
Msa0077340	Msa0579160	0.844566	6.983209e-59	-8.615850e-47
Msa0079880	Msa0579160	0.830971	2.174749e-55	-8.615850e-47
Msa0080030	Msa0579160	0.843910	1.048036e-58	-8.615850e-47
Msa0088520	Msa0579160	0.818673	1.733782e-52	-8.615850e-47
Msa0091240	Msa0579160	-0.800681	1.285932e-48	-8.615850e-47
Msa0098240	Msa0579160	0.842669	2.245906e-58	-8.615850e-47
Msa0101530	Msa0579160	0.851598	7.995226e-61	-8.615850e-47
Msa0105650	Msa0579160	0.840902	6.570974e-58	-8.615850e-47
Msa0124910	Msa0579160	0.800383	1.478691e-48	-8.615850e-47
Msa0125360	Msa0579160	0.820492	6.665676e-53	-8.615850e-47
Msa0127770	Msa0579160	0.800591	1.341398e-48	-8.615850e-47
Msa0139500	Msa0579160	0.801330	9.472291e-49	-8.615850e-47
Msa0142430	Msa0579160	0.853303	2.612686e-61	-8.615850e-47
Msa0161480	Msa0579160	0.821604	3.696253e-53	-8.615850e-47
Msa0165640	Msa0579160	0.848594	5.548069e-60	-8.615850e-47
Msa0169410	Msa0579160	0.803072	4.151085e-49	-8.615850e-47
Msa0183310	Msa0579160	-0.839058	1.988514e-57	-8.615850e-47
Msa0183710	Msa0579160	0.824349	8.471199e-54	-8.615850e-47
Msa0189270	Msa0579160	0.812581	3.944166e-51	-8.615850e-47
Msa0192250	Msa0579160	0.805761	1.142234e-49	-8.615850e-47
Msa0195230	Msa0579160	0.816838	4.499534e-52	-8.615850e-47
Msa0195260	Msa0579160	0.813262	2.797584e-51	-8.615850e-47
Msa0202490	Msa0579160	0.805841	1.098711e-49	-8.615850e-47
Msa0204950	Msa0579160	0.828395	9.206382e-55	-8.615850e-47
Msa0219280	Msa0579160	0.820572	6.390306e-53	-8.615850e-47
Msa0224110	Msa0579160	0.804622	1.977767e-49	-8.615850e-47
Msa0228490	Msa0579160	0.800469	1.420217e-48	-8.615850e-47
Msa0365210	Msa0579160	0.819500	1.124263e-52	-8.615850e-47
Msa0384590	Msa0579160	0.854419	1.246828e-61	-8.615850e-47
Msa0385930	Msa0579160	-0.802362	5.815372e-49	-8.615850e-47
Msa0397130	Msa0579160	0.808216	3.453387e-50	-8.615850e-47
Msa0402070	Msa0579160	-0.837122	6.261834e-57	-8.615850e-47
Msa0412790	Msa0579160	0.834291	3.262780e-56	-8.615850e-47
Msa0421220	Msa0579160	-0.802803	4.717069e-49	-8.615850e-47
Msa0424160	Msa0579160	0.804355	2.248074e-49	-8.615850e-47
Msa0434660	Msa0579160	0.840458	8.589705e-58	-8.615850e-47
Msa0436440	Msa0579160	0.804374	2.227894e-49	-8.615850e-47
Msa0437440	Msa0579160	-0.841486	4.615394e-58	-8.615850e-47
Msa0437520	Msa0579160	0.817457	3.265476e-52	-8.615850e-47
Msa0457560	Msa0579160	0.805901	1.067022e-49	-8.615850e-47
Msa0478430	Msa0579160	0.819696	1.014036e-52	-8.615850e-47
Msa0480900	Msa0579160	-0.811540	6.652986e-51	-8.615850e-47
Msa0256920	Msa0579160	0.801746	7.784348e-49	-8.615850e-47
Msa0281470	Msa0579160	0.864055	1.600431e-64	-8.615850e-47
Msa0286630	Msa0579160	0.811298	7.508997e-51	-8.615850e-47
Msa0288620	Msa0579160	0.811162	8.037962e-51	-8.615850e-47
Msa0298400	Msa0579160	0.801206	1.004592e-48	-8.615850e-47
Msa0313900	Msa0579160	0.814283	1.667362e-51	-8.615850e-47
Msa0319920	Msa0579160	0.805860	1.088713e-49	-8.615850e-47
Msa0320600	Msa0579160	0.819385	1.194125e-52	-8.615850e-47
Msa0330520	Msa0579160	0.826442	2.707130e-54	-8.615850e-47
Msa0336120	Msa0579160	0.805167	1.520966e-49	-8.615850e-47
Msa0354970	Msa0579160	-0.847123	1.410778e-59	-8.615850e-47
Msa0355080	Msa0579160	-0.876855	1.001606e-68	-8.615850e-47
Msa0484210	Msa0579160	-0.809602	1.745141e-50	-8.615850e-47
Msa0500650	Msa0579160	0.808584	2.882308e-50	-8.615850e-47
Msa0521610	Msa0579160	0.805428	1.341497e-49	-8.615850e-47
Msa0522540	Msa0579160	0.853327	2.570924e-61	-8.615850e-47
Msa0526150	Msa0579160	0.832859	7.433760e-56	-8.615850e-47
Msa0529030	Msa0579160	0.813778	2.154494e-51	-8.615850e-47
Msa0540670	Msa0579160	0.811181	7.960485e-51	-8.615850e-47
Msa0543560	Msa0579160	0.824681	7.075587e-54	-8.615850e-47
Msa0566280	Msa0579160	0.827949	1.179412e-54	-8.615850e-47
Msa0566340	Msa0579160	0.809940	1.476033e-50	-8.615850e-47
Msa0566940	Msa0579160	-0.831292	1.813224e-55	-8.615850e-47
Msa0567330	Msa0579160	0.804983	1.662159e-49	-8.615850e-47
Msa0576790	Msa0579160	0.823812	1.132220e-53	-8.615850e-47
Msa0579080	Msa0579160	0.975327	9.462888e-140	-8.615850e-47
Msa0579160	Msa0579220	0.997067	2.263826e-236	-8.615850e-47
Msa0579160	Msa0582960	0.826399	2.771480e-54	-8.615850e-47
Msa0579160	Msa0590620	-0.825663	4.144972e-54	-8.615850e-47
Msa0579160	Msa0610690	0.970354	1.727371e-131	-8.615850e-47
Msa0579160	Msa0619780	0.836533	8.853070e-57	-8.615850e-47
Msa0579160	Msa0630440	0.812725	3.668969e-51	-8.615850e-47
Msa0579160	Msa0644330	0.803850	2.862881e-49	-8.615850e-47
Msa0579160	Msa0651550	0.800788	1.222845e-48	-8.615850e-47
Msa0579160	Msa0652770	0.812894	3.369672e-51	-8.615850e-47
Msa0579160	Msa0657710	0.832169	1.101644e-55	-8.615850e-47
Msa0579160	Msa0657720	0.800358	1.496020e-48	-8.615850e-47
Msa0579160	Msa0674480	0.854393	1.268373e-61	-8.615850e-47
Msa0579160	Msa0678380	0.826023	3.405953e-54	-8.615850e-47
Msa0579160	Msa0693330	0.822219	2.663015e-53	-8.615850e-47
Msa0579160	Msa0702800	0.842959	1.880544e-58	-8.615850e-47
Msa0579160	Msa0703950	0.835836	1.330711e-56	-8.615850e-47
Msa0579160	Msa0706230	0.814564	1.444951e-51	-8.615850e-47
Msa0579160	Msa0707360	0.821726	3.463209e-53	-8.615850e-47
Msa0579160	Msa0712860	0.847900	8.627033e-60	-8.615850e-47
Msa0579160	Msa0726170	-0.831655	1.476210e-55	-8.615850e-47
Msa0579160	Msa0733080	0.812710	3.697131e-51	-8.615850e-47
Msa0579160	Msa0742370	-0.870625	1.267040e-66	-8.615850e-47
Msa0579160	Msa0746650	0.828395	9.206382e-55	-8.615850e-47
Msa0579160	Msa0758780	-0.827956	1.174913e-54	-8.615850e-47
Msa0579160	Msa0758810	-0.832483	9.211111e-56	-8.615850e-47
Msa0579160	Msa0765960	-0.808735	2.676135e-50	-8.615850e-47
Msa0579160	Msa0774060	0.819784	9.683151e-53	-8.615850e-47
Msa0579160	Msa0779450	-0.840744	7.229704e-58	-8.615850e-47
Msa0579160	Msa0795750	0.891882	2.646540e-74	-8.615850e-47
Msa0579160	Msa0800480	0.846355	2.288056e-59	-8.615850e-47
Msa0579160	Msa0805390	0.823820	1.127612e-53	-8.615850e-47
Msa0579160	Msa0811690	0.881469	2.338706e-70	-8.615850e-47
Msa0579160	Msa0823480	-0.828442	8.971031e-55	-8.615850e-47
Msa0579160	Msa0828950	0.803577	3.262944e-49	-8.615850e-47
Msa0579160	Msa0828960	0.843774	1.139254e-58	-8.615850e-47
Msa0579160	Msa0831740	0.801392	9.199470e-49	-8.615850e-47
Msa0579160	Msa0833530	0.814345	1.615546e-51	-8.615850e-47
Msa0579160	Msa0838620	-0.813022	3.158140e-51	-8.615850e-47
Msa0579160	Msa0841050	0.800575	1.351596e-48	-8.615850e-47
Msa0579160	Msa0842140	0.825815	3.816532e-54	-8.615850e-47
Msa0579160	Msa0851850	0.904857	7.913261e-80	-8.615850e-47
Msa0579160	Msa0862480	-0.868955	4.443826e-66	-8.615850e-47
Msa0579160	Msa0865420	0.817855	2.656147e-52	-8.615850e-47
Msa0579160	Msa0894790	0.804538	2.058941e-49	-8.615850e-47
Msa0579160	Msa0909260	0.826590	2.495931e-54	-8.615850e-47
Msa0579160	Msa0928180	0.815034	1.136820e-51	-8.615850e-47
Msa0579160	Msa0930770	0.807754	4.331150e-50	-8.615850e-47
Msa0579160	Msa0940910	0.821459	3.991907e-53	-8.615850e-47
Msa0579160	Msa0945190	0.803988	2.679917e-49	-8.615850e-47
Msa0579160	Msa0958830	0.811906	5.537738e-51	-8.615850e-47
Msa0579160	Msa0964020	0.823847	1.110877e-53	-8.615850e-47
Msa0579160	Msa0967070	0.802072	6.672407e-49	-8.615850e-47
Msa0579160	Msa0967780	0.800938	1.139408e-48	-8.615850e-47
Msa0579160	Msa0982730	0.822779	1.973129e-53	-8.615850e-47
Msa0579160	Msa0993190	0.811996	5.292963e-51	-8.615850e-47
Msa0579160	Msa0994720	0.800181	1.625814e-48	-8.615850e-47
Msa0579160	Msa1015360	0.837428	5.230068e-57	-8.615850e-47
Msa0579160	Msa1022420	0.840634	7.725335e-58	-8.615850e-47
Msa0579160	Msa1028420	0.805595	1.237210e-49	-8.615850e-47
Msa0579160	Msa1032470	0.855059	8.134795e-62	-8.615850e-47
Msa0579160	Msa1039100	0.802833	4.649758e-49	-8.615850e-47
Msa0579160	Msa1039440	-0.828368	9.349203e-55	-8.615850e-47
Msa0579160	Msa1041060	0.805030	1.625260e-49	-8.615850e-47
Msa0579160	Msa1044250	0.848096	7.618104e-60	-8.615850e-47
Msa0579160	Msa1070460	0.802835	4.646974e-49	-8.615850e-47
Msa0579160	Msa1072250	0.806158	9.422528e-50	-8.615850e-47
Msa0579160	Msa1082410	0.826335	2.871141e-54	-8.615850e-47
Msa0579160	Msa1083700	0.808457	3.068672e-50	-8.615850e-47
Msa0579160	Msa1088400	-0.804176	2.449550e-49	-8.615850e-47
Msa0579160	Msa1094810	0.816958	4.227467e-52	-8.615850e-47
Msa0579160	Msa1102060	-0.804774	1.838071e-49	-8.615850e-47
Msa0579160	Msa1106590	0.812749	3.624885e-51	-8.615850e-47
Msa0579160	Msa1114690	0.857983	1.125557e-62	-8.615850e-47
Msa0579160	Msa1115600	0.803260	3.795265e-49	-8.615850e-47
Msa0579160	Msa1128520	-0.801224	9.961244e-49	-8.615850e-47
Msa0579160	Msa1133750	0.852477	4.498836e-61	-8.615850e-47
Msa0579160	Msa1146980	0.806557	7.762002e-50	-8.615850e-47
Msa0579160	Msa1147650	0.816160	6.382511e-52	-8.615850e-47
Msa0579160	Msa1154320	0.831293	1.811932e-55	-8.615850e-47
Msa0579160	Msa1165460	0.818415	1.983987e-52	-8.615850e-47
Msa0579160	Msa1166660	0.804181	2.443643e-49	-8.615850e-47
Msa0579160	Msa1184680	0.865054	7.795956e-65	-8.615850e-47
Msa0579160	Msa1190770	0.842954	1.885723e-58	-8.615850e-47
Msa0579160	Msa1194240	0.820764	5.772919e-53	-8.615850e-47
Msa0579160	Msa1197720	0.863323	2.701489e-64	-8.615850e-47
Msa0579160	Msa1203650	0.806640	7.456769e-50	-8.615850e-47
Msa0579160	Msa1207920	-0.842944	1.896978e-58	-8.615850e-47
Msa0579160	Msa1210040	0.824364	8.402309e-54	-8.615850e-47
Msa0579160	Msa1212830	0.826663	2.396903e-54	-8.615850e-47
Msa0579160	Msa1213040	0.832446	9.411860e-56	-8.615850e-47
Msa0579160	Msa1219930	0.856431	3.233009e-62	-8.615850e-47
Msa0579160	Msa1240190	0.816545	5.232528e-52	-8.615850e-47
Msa0579160	Msa1240220	0.808417	3.128471e-50	-8.615850e-47
Msa0579160	Msa1251410	0.874640	5.766917e-68	-8.615850e-47
Msa0579160	Msa1259160	0.818210	2.207465e-52	-8.615850e-47
Msa0579160	Msa1260220	0.859754	3.322140e-63	-8.615850e-47
Msa0579160	Msa1283930	0.812528	4.051251e-51	-8.615850e-47
Msa0579160	Msa1284020	0.804229	2.387680e-49	-8.615850e-47
Msa0579160	Msa1299650	0.824223	9.068910e-54	-8.615850e-47
Msa0579160	Msa1322960	0.817366	3.423443e-52	-8.615850e-47
Msa0579160	Msa1323070	0.861428	1.032933e-63	-8.615850e-47
Msa0579160	Msa1327800	0.820207	7.748062e-53	-8.615850e-47
Msa0579160	Msa1331570	-0.836085	1.150204e-56	-8.615850e-47
Msa0579160	Msa1349690	0.830541	2.770679e-55	-8.615850e-47
Msa0579160	Msa1351990	0.824499	7.810301e-54	-8.615850e-47
Msa0579160	Msa1352580	0.804548	2.048724e-49	-8.615850e-47
Msa0579160	Msa1352600	-0.811624	6.377841e-51	-8.615850e-47
Msa0579160	Msa1358290	0.825767	3.917653e-54	-8.615850e-47
Msa0579160	Msa1361980	0.804917	1.715903e-49	-8.615850e-47
Msa0579160	Msa1363010	0.818910	1.531504e-52	-8.615850e-47
Msa0579160	Msa1363280	-0.813592	2.368094e-51	-8.615850e-47
Msa0579160	Msa1368390	0.829260	5.684741e-55	-8.615850e-47
Msa0579160	Msa1372000	0.807465	4.989472e-50	-8.615850e-47
Msa0579160	Msa1381260	0.809330	1.996306e-50	-8.615850e-47
Msa0579160	Msa1384700	0.849934	2.349994e-60	-8.615850e-47
Msa0579160	Msa1387570	0.800234	1.586022e-48	-8.615850e-47
Msa0579160	Msa1389900	0.815217	1.035200e-51	-8.615850e-47
Msa0579160	Msa1391500	0.857121	2.025175e-62	-8.615850e-47
Msa0579160	Msa1392740	0.828684	7.841998e-55	-8.615850e-47
Msa0579160	Msa1396200	-0.861309	1.123506e-63	-8.615850e-47
Msa0579160	Msa1398810	0.807640	4.580279e-50	-8.615850e-47
Msa0579160	Msa1405460	0.817028	4.078156e-52	-8.615850e-47
Msa0579160	Msa1407840	0.829894	3.987148e-55	-8.615850e-47
Msa0579160	Msa1408390	0.807556	4.772600e-50	-8.615850e-47
Msa0579160	Msa1412000	0.823422	1.397366e-53	-8.615850e-47
Msa0579160	Msa1422860	0.875630	2.648546e-68	-8.615850e-47
Msa0579160	Msa1428230	-0.842817	2.050682e-58	-8.615850e-47
Msa0579160	Msa1433360	0.810992	8.745569e-51	-8.615850e-47
Msa0579160	Msa1434300	0.811918	5.506347e-51	-8.615850e-47
Msa0579160	Msa1437810	0.832322	1.009825e-55	-8.615850e-47
Msa0579160	Msa1439250	0.855189	7.454315e-62	-8.615850e-47
Msa0579160	Msa1439930	0.821894	3.168013e-53	-8.615850e-47
Msa0579160	Msa1445530	0.809028	2.316647e-50	-8.615850e-47
Msa0579160	Msa1447100	0.808163	3.545194e-50	-8.615850e-47
Msa0579160	Msa1454500	0.824388	8.292490e-54	-8.615850e-47
Msa0579160	Msa1457770	0.810080	1.376789e-50	-8.615850e-47
Msa0579160	Msa1457890	0.818940	1.507467e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0579160	MtrunA17_Chr4g0043711	98.065	155	3	0	1	155	1	155	1.03e-112	316
Msa0579160	MtrunA17_Chr5g0400431	66.418	134	45	0	22	155	33	166	2.25e-66	199
Msa0579160	MtrunA17_Chr7g0260591	77.358	53	10	1	53	103	3	55	5.48e-20	78.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0579160	AT2G35120.1	78.205	156	33	1	1	155	1	156	2.81e-88	254
Msa0579160	AT1G32470.1	58.084	167	57	2	1	155	1	166	8.19e-63	191
Msa0579160	AT2G35370.1	65.441	136	47	0	20	155	30	165	1.88e-62	189

Find 58 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GACATCAACTCTCCTGTTTC+AGG	0.209182	4_1:+83797541	Msa0579160:CDS
TTCACTGCCGTTCCCACTTC+TGG	0.241034	4_1:-83797472	None:intergenic
AGAAGTTCTATGAATTTAAT+AGG	0.244254	4_1:+83798155	Msa0579160:three_prime_UTR
AACTCAAGCCCCTATGAAAA+TGG	0.268193	4_1:+83797733	Msa0579160:CDS
AGATGGCTTGCAGGCAGTTA+TGG	0.326829	4_1:+83796025	Msa0579160:exon
AGTGAAGAGTGGTAGGGTTA+AGG	0.337032	4_1:-83795890	None:intergenic
TGATCATGCCCAAGATCATT+TGG	0.340864	4_1:+83797426	Msa0579160:CDS
CATCATGCAACTCATTTACT+AGG	0.362088	4_1:-83798281	None:intergenic
TGGTATAGATGATGTCAATT+TGG	0.362666	4_1:+83797891	Msa0579160:three_prime_UTR
GTGAAACAAGGAGATGGTTT+TGG	0.366878	4_1:+83797490	Msa0579160:CDS
ATCTTCTTCTTCACAGAACT+TGG	0.368009	4_1:-83797824	None:intergenic
CAACATCACCCAAATGATCT+TGG	0.387609	4_1:-83797435	None:intergenic
GATGGCTTGCAGGCAGTTAT+GGG	0.405390	4_1:+83796026	Msa0579160:exon
AGTGGTAGGGTTAAGGAAGT+TGG	0.419936	4_1:-83795883	None:intergenic
GAGAGAGAGTGAAGAGTGGT+AGG	0.424407	4_1:-83795897	None:intergenic
TGGCGAACTTGACAAATTGA+TGG	0.434808	4_1:+83797786	Msa0579160:CDS
GCTCAGCAACTCTCCTGCTT+TGG	0.435121	4_1:+83797588	Msa0579160:CDS
CCTGAGGTATGATGCGGCTC+TGG	0.441316	4_1:-83796052	None:intergenic
ATTCATTCATTCAGTGTAAG+TGG	0.444370	4_1:+83795971	Msa0579160:five_prime_UTR
TGAATGTCGTATGACAAAAC+TGG	0.478972	4_1:-83798094	None:intergenic
GATCATGCCCAAGATCATTT+GGG	0.482133	4_1:+83797427	Msa0579160:CDS
TGGGAAGTACTGAAAGATAT+CGG	0.488163	4_1:-83797867	None:intergenic
GCAATAAAACTCACCAAAGC+AGG	0.490891	4_1:-83797601	None:intergenic
CATGAATGGGTGAAAGTTGA+CGG	0.492157	4_1:+83797379	Msa0579160:CDS
AACATCACCCAAATGATCTT+GGG	0.497081	4_1:-83797434	None:intergenic
CCAGAGCCGCATCATACCTC+AGG	0.521213	4_1:+83796052	Msa0579160:CDS
AGTATGCTGATTCTCATGAA+TGG	0.523325	4_1:+83797365	Msa0579160:CDS
TGCGCTAGCTTCTGATGCAG+AGG	0.534256	4_1:+83797972	Msa0579160:three_prime_UTR
TTGACATCATCTATACCAAT+GGG	0.535199	4_1:-83797886	None:intergenic
CAAGCCCCTATGAAAATGGA+TGG	0.537218	4_1:+83797737	Msa0579160:CDS
ATCATGCAACTCATTTACTA+GGG	0.541363	4_1:-83798280	None:intergenic
TATCTTTCAGTACTTCCCAT+TGG	0.548271	4_1:+83797871	Msa0579160:three_prime_UTR
GCGCTAGCTTCTGATGCAGA+GGG	0.548373	4_1:+83797973	Msa0579160:three_prime_UTR
TTCCATCTTAGTTGAAAACA+AGG	0.549310	4_1:-83798131	None:intergenic
CTGAGAGAGAGAGTGAAGAG+TGG	0.551470	4_1:-83795901	None:intergenic
GTATGCTGATTCTCATGAAT+GGG	0.551627	4_1:+83797366	Msa0579160:CDS
AGAGAGAGTGAAGAGTGGTA+GGG	0.552288	4_1:-83795896	None:intergenic
ATTGACATCATCTATACCAA+TGG	0.555452	4_1:-83797887	None:intergenic
GACGGAAAATCTGCAACCAT+TGG	0.558598	4_1:+83797397	Msa0579160:CDS
TCGGCAAGACTATCAATGAC+TGG	0.570070	4_1:-83797848	None:intergenic
ATTGCTGTGGTTGGTGACAA+AGG	0.572500	4_1:-83795927	None:intergenic
TTTCACAGAACCTTCTCTAA+CGG	0.580128	4_1:+83796084	Msa0579160:CDS
TTGCTGTGGTTGGTGACAAA+GGG	0.582432	4_1:-83795926	None:intergenic
TCCATCTTAGTTGAAAACAA+GGG	0.618905	4_1:-83798130	None:intergenic
TGAATGAATACCGTTAGAGA+AGG	0.619094	4_1:-83796094	None:intergenic
TGGTGCAGTTGAAAGTGTGA+AGG	0.619953	4_1:+83797510	Msa0579160:CDS
TGAATTGCCAGAAGTGGGAA+CGG	0.630383	4_1:+83797465	Msa0579160:CDS
GTGGGAACGGCAGTGAAACA+AGG	0.631106	4_1:+83797478	Msa0579160:CDS
ACGGCAGTGAAACAAGGAGA+TGG	0.634473	4_1:+83797484	Msa0579160:CDS
GGCATGATCAGTTATGCCAA+TGG	0.640158	4_1:-83797413	None:intergenic
CATTCATTCAGTGTAAGTGG+TGG	0.640220	4_1:+83795974	Msa0579160:five_prime_UTR
GTATGTTGAATTGCCAGAAG+TGG	0.646780	4_1:+83797459	Msa0579160:CDS
TGTGAAAGACAGAGATCCTG+AGG	0.655630	4_1:-83796068	None:intergenic
TATGTTGAATTGCCAGAAGT+GGG	0.663199	4_1:+83797460	Msa0579160:CDS
TCATGCAACTCATTTACTAG+GGG	0.688705	4_1:-83798279	None:intergenic
AGAGATCCTGAGGTATGATG+CGG	0.690860	4_1:-83796058	None:intergenic
AAAGTTGAGATGAGTGACAG+TGG	0.702478	4_1:+83797766	Msa0579160:CDS
CATGCAACTCATTTACTAGG+GGG	0.728223	4_1:-83798278	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAAAAGTTAATTATGAATA+AGG	-	chr4_1:83797626-83797645	None:intergenic	10.0%
!!	ATAAAAGTTAATTATGAATA+AGG	-	chr4_1:83797626-83797645	None:intergenic	10.0%
!!	TAATAATAAAATAAAAAGCG+AGG	-	chr4_1:83796199-83796218	None:intergenic	15.0%
!!	TTGTTAACAAAAAAACAAAA+TGG	-	chr4_1:83796429-83796448	None:intergenic	15.0%
!!!	AGATTTTATTGAGATATTAA+CGG	-	chr4_1:83796896-83796915	None:intergenic	15.0%
!!!	AACCAAAATTTATAATTTGT+AGG	+	chr4_1:83797044-83797063	Msa0579160:intron	15.0%
!!!	ATCCTACAAATTATAAATTT+TGG	-	chr4_1:83797049-83797068	None:intergenic	15.0%
!!!	AAAATTTATAATTTGTAGGA+TGG	+	chr4_1:83797048-83797067	Msa0579160:intron	15.0%
!!	TTAAAATTCAATATGCAAAT+TGG	-	chr4_1:83797094-83797113	None:intergenic	15.0%
!!!	TTTTAATATCTTGAAAGTTT+TGG	+	chr4_1:83797108-83797127	Msa0579160:intron	15.0%
!!	TAATAATAAAATAAAAAGCG+AGG	-	chr4_1:83796199-83796218	None:intergenic	15.0%
!!	TTGTTAACAAAAAAACAAAA+TGG	-	chr4_1:83796429-83796448	None:intergenic	15.0%
!!!	AGATTTTATTGAGATATTAA+CGG	-	chr4_1:83796896-83796915	None:intergenic	15.0%
!!!	AACCAAAATTTATAATTTGT+AGG	+	chr4_1:83797044-83797063	Msa0579160:intron	15.0%
!!!	ATCCTACAAATTATAAATTT+TGG	-	chr4_1:83797049-83797068	None:intergenic	15.0%
!!!	AAAATTTATAATTTGTAGGA+TGG	+	chr4_1:83797048-83797067	Msa0579160:intron	15.0%
!!	TTAAAATTCAATATGCAAAT+TGG	-	chr4_1:83797094-83797113	None:intergenic	15.0%
!!!	TTTTAATATCTTGAAAGTTT+TGG	+	chr4_1:83797108-83797127	Msa0579160:intron	15.0%
!!	AGATCAAGTTCAAAATAAAT+TGG	-	chr4_1:83796297-83796316	None:intergenic	20.0%
!!	ATATGTAAGTAACATATACT+AGG	+	chr4_1:83796448-83796467	Msa0579160:intron	20.0%
!!	AAAAATGTAACAAACAACAT+AGG	-	chr4_1:83796527-83796546	None:intergenic	20.0%
!!!	AAATGTTTGAATAGCTTTAT+AGG	-	chr4_1:83796797-83796816	None:intergenic	20.0%
!!!	ATTTTGTTCTAACTATTATC+TGG	+	chr4_1:83796928-83796947	Msa0579160:intron	20.0%
!!	AGAAGTTCTATGAATTTAAT+AGG	+	chr4_1:83798155-83798174	Msa0579160:three_prime_UTR	20.0%
!!	AAAGAAGAAAAAAACTAGTA+GGG	-	chr4_1:83798221-83798240	None:intergenic	20.0%
!!	AAAAGAAGAAAAAAACTAGT+AGG	-	chr4_1:83798222-83798241	None:intergenic	20.0%
!!	AGATCAAGTTCAAAATAAAT+TGG	-	chr4_1:83796297-83796316	None:intergenic	20.0%
!!	ATATGTAAGTAACATATACT+AGG	+	chr4_1:83796448-83796467	Msa0579160:intron	20.0%
!!	AAAAATGTAACAAACAACAT+AGG	-	chr4_1:83796527-83796546	None:intergenic	20.0%
!!!	AAATGTTTGAATAGCTTTAT+AGG	-	chr4_1:83796797-83796816	None:intergenic	20.0%
!!!	ATTTTGTTCTAACTATTATC+TGG	+	chr4_1:83796928-83796947	Msa0579160:intron	20.0%
!!	AGAAGTTCTATGAATTTAAT+AGG	+	chr4_1:83798155-83798174	Msa0579160:three_prime_UTR	20.0%
!!	AAAGAAGAAAAAAACTAGTA+GGG	-	chr4_1:83798221-83798240	None:intergenic	20.0%
!!	AAAAGAAGAAAAAAACTAGT+AGG	-	chr4_1:83798222-83798241	None:intergenic	20.0%
!	AACCACAGCAATATAAAAAA+GGG	+	chr4_1:83795938-83795957	Msa0579160:five_prime_UTR	25.0%
!	TCAAGTTCAAAATAAATTGG+AGG	-	chr4_1:83796294-83796313	None:intergenic	25.0%
!!	TTTTAGTGAATAGTGACAAA+AGG	+	chr4_1:83796397-83796416	Msa0579160:intron	25.0%
!!	AGAATATTCCATTTCCATTT+TGG	-	chr4_1:83796481-83796500	None:intergenic	25.0%
!!!	AAGTTCGTTTTTGCTTTTAA+AGG	+	chr4_1:83796646-83796665	Msa0579160:intron	25.0%
!	ATAACTCAGTCAAAAGAAAT+TGG	-	chr4_1:83796761-83796780	None:intergenic	25.0%
!!!	GAATAGCTTTATAGGTAAAT+TGG	-	chr4_1:83796789-83796808	None:intergenic	25.0%
!!	TAACGGTTTAATTGATTTCA+AGG	-	chr4_1:83796879-83796898	None:intergenic	25.0%
!	TATTATCTGGTACATCATAT+TGG	+	chr4_1:83796941-83796960	Msa0579160:intron	25.0%
!	TTAAAACTTAAAGTGAACGA+TGG	+	chr4_1:83796975-83796994	Msa0579160:intron	25.0%
!	TAAAACTTAAAGTGAACGAT+GGG	+	chr4_1:83796976-83796995	Msa0579160:intron	25.0%
!	CTTACAAATGAACAATGATA+TGG	-	chr4_1:83797007-83797026	None:intergenic	25.0%
!	TAGGAAAACATAAAAACACT+TGG	-	chr4_1:83797695-83797714	None:intergenic	25.0%
!!	ATTATCCATCCATTTTCATA+GGG	-	chr4_1:83797745-83797764	None:intergenic	25.0%
!!	AATTATCCATCCATTTTCAT+AGG	-	chr4_1:83797746-83797765	None:intergenic	25.0%
!!	AAAAATGAGATTGATAACCT+GGG	+	chr4_1:83798021-83798040	Msa0579160:three_prime_UTR	25.0%
!!	TTTTTATTATCAAACTTCCC+AGG	-	chr4_1:83798041-83798060	None:intergenic	25.0%
!	AACCACAGCAATATAAAAAA+GGG	+	chr4_1:83795938-83795957	Msa0579160:five_prime_UTR	25.0%
!	TCAAGTTCAAAATAAATTGG+AGG	-	chr4_1:83796294-83796313	None:intergenic	25.0%
!!	TTTTAGTGAATAGTGACAAA+AGG	+	chr4_1:83796397-83796416	Msa0579160:intron	25.0%
!!	AGAATATTCCATTTCCATTT+TGG	-	chr4_1:83796481-83796500	None:intergenic	25.0%
!!!	AAGTTCGTTTTTGCTTTTAA+AGG	+	chr4_1:83796646-83796665	Msa0579160:intron	25.0%
!	ATAACTCAGTCAAAAGAAAT+TGG	-	chr4_1:83796761-83796780	None:intergenic	25.0%
!!!	GAATAGCTTTATAGGTAAAT+TGG	-	chr4_1:83796789-83796808	None:intergenic	25.0%
!!	TAACGGTTTAATTGATTTCA+AGG	-	chr4_1:83796879-83796898	None:intergenic	25.0%
!	TATTATCTGGTACATCATAT+TGG	+	chr4_1:83796941-83796960	Msa0579160:intron	25.0%
!	TTAAAACTTAAAGTGAACGA+TGG	+	chr4_1:83796975-83796994	Msa0579160:intron	25.0%
!	TAAAACTTAAAGTGAACGAT+GGG	+	chr4_1:83796976-83796995	Msa0579160:intron	25.0%
!	CTTACAAATGAACAATGATA+TGG	-	chr4_1:83797007-83797026	None:intergenic	25.0%
!	TAGGAAAACATAAAAACACT+TGG	-	chr4_1:83797695-83797714	None:intergenic	25.0%
!!	ATTATCCATCCATTTTCATA+GGG	-	chr4_1:83797745-83797764	None:intergenic	25.0%
!!	AATTATCCATCCATTTTCAT+AGG	-	chr4_1:83797746-83797765	None:intergenic	25.0%
!!	AAAAATGAGATTGATAACCT+GGG	+	chr4_1:83798021-83798040	Msa0579160:three_prime_UTR	25.0%
!!	TTTTTATTATCAAACTTCCC+AGG	-	chr4_1:83798041-83798060	None:intergenic	25.0%
!!!	CTTTTTTATATTGCTGTGGT+TGG	-	chr4_1:83795939-83795958	None:intergenic	30.0%
	CAACCACAGCAATATAAAAA+AGG	+	chr4_1:83795937-83795956	Msa0579160:five_prime_UTR	30.0%
	ATTCATTCATTCAGTGTAAG+TGG	+	chr4_1:83795971-83795990	Msa0579160:five_prime_UTR	30.0%
	ATTGCCTTTATATACGTTAG+TGG	+	chr4_1:83796234-83796253	Msa0579160:intron	30.0%
	TTGCCTTTATATACGTTAGT+GGG	+	chr4_1:83796235-83796254	Msa0579160:intron	30.0%
!	TTTTGAACTTGATCTGTATG+TGG	+	chr4_1:83796302-83796321	Msa0579160:intron	30.0%
	AATTGAAAGAATAGATCGTC+CGG	-	chr4_1:83796379-83796398	None:intergenic	30.0%
	TACTAGGCTAAATTCCAAAA+TGG	+	chr4_1:83796464-83796483	Msa0579160:intron	30.0%
	GCTAAATTCCAAAATGGAAA+TGG	+	chr4_1:83796470-83796489	Msa0579160:intron	30.0%
	GTGCATATTTCGAAATTAAG+TGG	+	chr4_1:83796604-83796623	Msa0579160:intron	30.0%
!!	AATTTAGCTTGTTAGCACTT+TGG	+	chr4_1:83796683-83796702	Msa0579160:intron	30.0%
!!	ATTTAGCTTGTTAGCACTTT+GGG	+	chr4_1:83796684-83796703	Msa0579160:intron	30.0%
!!	TAACAAACTGTTGGTTTGTT+TGG	+	chr4_1:83796713-83796732	Msa0579160:intron	30.0%
	AATAATCCAAATTACTCTCG+AGG	+	chr4_1:83796818-83796837	Msa0579160:intron	30.0%
!	CAATATGCTACTTGTTCAAT+TGG	-	chr4_1:83797245-83797264	None:intergenic	30.0%
	CAATTGAACAAGTAGCATAT+TGG	+	chr4_1:83797243-83797262	Msa0579160:intron	30.0%
!	ATTGAAACCAACATTTTGCA+AGG	+	chr4_1:83797293-83797312	Msa0579160:intron	30.0%
!!	TTTCCTATTTTTCTTCGTGT+AGG	+	chr4_1:83797708-83797727	Msa0579160:intron	30.0%
!	TTATCCATCCATTTTCATAG+GGG	-	chr4_1:83797744-83797763	None:intergenic	30.0%
	TTGACATCATCTATACCAAT+GGG	-	chr4_1:83797889-83797908	None:intergenic	30.0%
	ATTGACATCATCTATACCAA+TGG	-	chr4_1:83797890-83797909	None:intergenic	30.0%
	TGGTATAGATGATGTCAATT+TGG	+	chr4_1:83797891-83797910	Msa0579160:three_prime_UTR	30.0%
!!	TCTCATTTTTCCATTGCAAA+GGG	-	chr4_1:83798011-83798030	None:intergenic	30.0%
!!	ATCTCATTTTTCCATTGCAA+AGG	-	chr4_1:83798012-83798031	None:intergenic	30.0%
!	GAAAAATGAGATTGATAACC+TGG	+	chr4_1:83798020-83798039	Msa0579160:three_prime_UTR	30.0%
	TCCATCTTAGTTGAAAACAA+GGG	-	chr4_1:83798133-83798152	None:intergenic	30.0%
	TTCCATCTTAGTTGAAAACA+AGG	-	chr4_1:83798134-83798153	None:intergenic	30.0%
!!	AAAAACTAGTAGGGTTTTAG+TGG	-	chr4_1:83798212-83798231	None:intergenic	30.0%
	ATCATGCAACTCATTTACTA+GGG	-	chr4_1:83798283-83798302	None:intergenic	30.0%
!!!	CTTTTTTATATTGCTGTGGT+TGG	-	chr4_1:83795939-83795958	None:intergenic	30.0%
	CAACCACAGCAATATAAAAA+AGG	+	chr4_1:83795937-83795956	Msa0579160:five_prime_UTR	30.0%
	ATTCATTCATTCAGTGTAAG+TGG	+	chr4_1:83795971-83795990	Msa0579160:five_prime_UTR	30.0%
	ATTGCCTTTATATACGTTAG+TGG	+	chr4_1:83796234-83796253	Msa0579160:intron	30.0%
	TTGCCTTTATATACGTTAGT+GGG	+	chr4_1:83796235-83796254	Msa0579160:intron	30.0%
!	TTTTGAACTTGATCTGTATG+TGG	+	chr4_1:83796302-83796321	Msa0579160:intron	30.0%
	AATTGAAAGAATAGATCGTC+CGG	-	chr4_1:83796379-83796398	None:intergenic	30.0%
	TACTAGGCTAAATTCCAAAA+TGG	+	chr4_1:83796464-83796483	Msa0579160:intron	30.0%
	GCTAAATTCCAAAATGGAAA+TGG	+	chr4_1:83796470-83796489	Msa0579160:intron	30.0%
	GTGCATATTTCGAAATTAAG+TGG	+	chr4_1:83796604-83796623	Msa0579160:intron	30.0%
!!	AATTTAGCTTGTTAGCACTT+TGG	+	chr4_1:83796683-83796702	Msa0579160:intron	30.0%
!!	ATTTAGCTTGTTAGCACTTT+GGG	+	chr4_1:83796684-83796703	Msa0579160:intron	30.0%
!!	TAACAAACTGTTGGTTTGTT+TGG	+	chr4_1:83796713-83796732	Msa0579160:intron	30.0%
	AATAATCCAAATTACTCTCG+AGG	+	chr4_1:83796818-83796837	Msa0579160:intron	30.0%
!	CAATATGCTACTTGTTCAAT+TGG	-	chr4_1:83797245-83797264	None:intergenic	30.0%
	CAATTGAACAAGTAGCATAT+TGG	+	chr4_1:83797243-83797262	Msa0579160:intron	30.0%
!	ATTGAAACCAACATTTTGCA+AGG	+	chr4_1:83797293-83797312	Msa0579160:intron	30.0%
!!	TTTCCTATTTTTCTTCGTGT+AGG	+	chr4_1:83797708-83797727	Msa0579160:intron	30.0%
!	TTATCCATCCATTTTCATAG+GGG	-	chr4_1:83797744-83797763	None:intergenic	30.0%
	TTGACATCATCTATACCAAT+GGG	-	chr4_1:83797889-83797908	None:intergenic	30.0%
	ATTGACATCATCTATACCAA+TGG	-	chr4_1:83797890-83797909	None:intergenic	30.0%
	TGGTATAGATGATGTCAATT+TGG	+	chr4_1:83797891-83797910	Msa0579160:three_prime_UTR	30.0%
!!	TCTCATTTTTCCATTGCAAA+GGG	-	chr4_1:83798011-83798030	None:intergenic	30.0%
!!	ATCTCATTTTTCCATTGCAA+AGG	-	chr4_1:83798012-83798031	None:intergenic	30.0%
!	GAAAAATGAGATTGATAACC+TGG	+	chr4_1:83798020-83798039	Msa0579160:three_prime_UTR	30.0%
	TCCATCTTAGTTGAAAACAA+GGG	-	chr4_1:83798133-83798152	None:intergenic	30.0%
	TTCCATCTTAGTTGAAAACA+AGG	-	chr4_1:83798134-83798153	None:intergenic	30.0%
!!	AAAAACTAGTAGGGTTTTAG+TGG	-	chr4_1:83798212-83798231	None:intergenic	30.0%
	ATCATGCAACTCATTTACTA+GGG	-	chr4_1:83798283-83798302	None:intergenic	30.0%
!!!	TGCCCTTTTTTATATTGCTG+TGG	-	chr4_1:83795943-83795962	None:intergenic	35.0%
	TTTCACAGAACCTTCTCTAA+CGG	+	chr4_1:83796084-83796103	Msa0579160:CDS	35.0%
	TGAATGAATACCGTTAGAGA+AGG	-	chr4_1:83796097-83796116	None:intergenic	35.0%
	CATGTTGTTGATCCAATATC+TGG	+	chr4_1:83796158-83796177	Msa0579160:intron	35.0%
!	TTGATCCAATATCTGGAATC+TGG	+	chr4_1:83796165-83796184	Msa0579160:intron	35.0%
	AAGATCCAGATTCCAGATAT+TGG	-	chr4_1:83796173-83796192	None:intergenic	35.0%
	CTTCCCACTAACGTATATAA+AGG	-	chr4_1:83796241-83796260	None:intergenic	35.0%
	CTTTATATACGTTAGTGGGA+AGG	+	chr4_1:83796239-83796258	Msa0579160:intron	35.0%
	ATAAATTGGAGGTGACTGAA+TGG	-	chr4_1:83796283-83796302	None:intergenic	35.0%
!!	TTTAGCTTGTTAGCACTTTG+GGG	+	chr4_1:83796685-83796704	Msa0579160:intron	35.0%
	ATGTTTCCTCGAGAGTAATT+TGG	-	chr4_1:83796827-83796846	None:intergenic	35.0%
!	CGGTTTAATTGATTTCAAGG+AGG	-	chr4_1:83796876-83796895	None:intergenic	35.0%
	ACATGATAATCATCATCTGC+AGG	+	chr4_1:83797167-83797186	Msa0579160:intron	35.0%
	CATACAACCTTGCAAAATGT+TGG	-	chr4_1:83797303-83797322	None:intergenic	35.0%
!!	AGTATGCTGATTCTCATGAA+TGG	+	chr4_1:83797365-83797384	Msa0579160:CDS	35.0%
!!	GTATGCTGATTCTCATGAAT+GGG	+	chr4_1:83797366-83797385	Msa0579160:CDS	35.0%
	AACATCACCCAAATGATCTT+GGG	-	chr4_1:83797437-83797456	None:intergenic	35.0%
	TATGTTGAATTGCCAGAAGT+GGG	+	chr4_1:83797460-83797479	Msa0579160:CDS	35.0%
!!	TCAATCACTTTTCCTGAAAC+AGG	-	chr4_1:83797556-83797575	None:intergenic	35.0%
	TGACCTACACGAAGAAAAAT+AGG	-	chr4_1:83797714-83797733	None:intergenic	35.0%
	ATCTTCTTCTTCACAGAACT+TGG	-	chr4_1:83797827-83797846	None:intergenic	35.0%
!!	TGGGAAGTACTGAAAGATAT+CGG	-	chr4_1:83797870-83797889	None:intergenic	35.0%
	TATCTTTCAGTACTTCCCAT+TGG	+	chr4_1:83797871-83797890	Msa0579160:three_prime_UTR	35.0%
!!	TCATTTTTCCATTGCAAAGG+GGG	-	chr4_1:83798009-83798028	None:intergenic	35.0%
!!	CTCATTTTTCCATTGCAAAG+GGG	-	chr4_1:83798010-83798029	None:intergenic	35.0%
	TGAATGTCGTATGACAAAAC+TGG	-	chr4_1:83798097-83798116	None:intergenic	35.0%
	TCATGCAACTCATTTACTAG+GGG	-	chr4_1:83798282-83798301	None:intergenic	35.0%
	CATCATGCAACTCATTTACT+AGG	-	chr4_1:83798284-83798303	None:intergenic	35.0%
!!!	TGCCCTTTTTTATATTGCTG+TGG	-	chr4_1:83795943-83795962	None:intergenic	35.0%
	TTTCACAGAACCTTCTCTAA+CGG	+	chr4_1:83796084-83796103	Msa0579160:CDS	35.0%
	TGAATGAATACCGTTAGAGA+AGG	-	chr4_1:83796097-83796116	None:intergenic	35.0%
	CATGTTGTTGATCCAATATC+TGG	+	chr4_1:83796158-83796177	Msa0579160:intron	35.0%
!	TTGATCCAATATCTGGAATC+TGG	+	chr4_1:83796165-83796184	Msa0579160:intron	35.0%
	AAGATCCAGATTCCAGATAT+TGG	-	chr4_1:83796173-83796192	None:intergenic	35.0%
	CTTCCCACTAACGTATATAA+AGG	-	chr4_1:83796241-83796260	None:intergenic	35.0%
	CTTTATATACGTTAGTGGGA+AGG	+	chr4_1:83796239-83796258	Msa0579160:intron	35.0%
	ATAAATTGGAGGTGACTGAA+TGG	-	chr4_1:83796283-83796302	None:intergenic	35.0%
!!	TTTAGCTTGTTAGCACTTTG+GGG	+	chr4_1:83796685-83796704	Msa0579160:intron	35.0%
	ATGTTTCCTCGAGAGTAATT+TGG	-	chr4_1:83796827-83796846	None:intergenic	35.0%
!	CGGTTTAATTGATTTCAAGG+AGG	-	chr4_1:83796876-83796895	None:intergenic	35.0%
	ACATGATAATCATCATCTGC+AGG	+	chr4_1:83797167-83797186	Msa0579160:intron	35.0%
	CATACAACCTTGCAAAATGT+TGG	-	chr4_1:83797303-83797322	None:intergenic	35.0%
!!	AGTATGCTGATTCTCATGAA+TGG	+	chr4_1:83797365-83797384	Msa0579160:CDS	35.0%
!!	GTATGCTGATTCTCATGAAT+GGG	+	chr4_1:83797366-83797385	Msa0579160:CDS	35.0%
	AACATCACCCAAATGATCTT+GGG	-	chr4_1:83797437-83797456	None:intergenic	35.0%
	TATGTTGAATTGCCAGAAGT+GGG	+	chr4_1:83797460-83797479	Msa0579160:CDS	35.0%
!!	TCAATCACTTTTCCTGAAAC+AGG	-	chr4_1:83797556-83797575	None:intergenic	35.0%
	TGACCTACACGAAGAAAAAT+AGG	-	chr4_1:83797714-83797733	None:intergenic	35.0%
	ATCTTCTTCTTCACAGAACT+TGG	-	chr4_1:83797827-83797846	None:intergenic	35.0%
!!	TGGGAAGTACTGAAAGATAT+CGG	-	chr4_1:83797870-83797889	None:intergenic	35.0%
	TATCTTTCAGTACTTCCCAT+TGG	+	chr4_1:83797871-83797890	Msa0579160:three_prime_UTR	35.0%
!!	TCATTTTTCCATTGCAAAGG+GGG	-	chr4_1:83798009-83798028	None:intergenic	35.0%
!!	CTCATTTTTCCATTGCAAAG+GGG	-	chr4_1:83798010-83798029	None:intergenic	35.0%
	TGAATGTCGTATGACAAAAC+TGG	-	chr4_1:83798097-83798116	None:intergenic	35.0%
	TCATGCAACTCATTTACTAG+GGG	-	chr4_1:83798282-83798301	None:intergenic	35.0%
	CATCATGCAACTCATTTACT+AGG	-	chr4_1:83798284-83798303	None:intergenic	35.0%
	CATTCATTCAGTGTAAGTGG+TGG	+	chr4_1:83795974-83795993	Msa0579160:five_prime_UTR	40.0%
	TGAATGGTGTAGTGCACTTT+CGG	-	chr4_1:83796267-83796286	None:intergenic	40.0%
!!	CACCAAAAGTTGATATACGG+CGG	-	chr4_1:83796356-83796375	None:intergenic	40.0%
!!	CGGCACCAAAAGTTGATATA+CGG	-	chr4_1:83796359-83796378	None:intergenic	40.0%
!!	CGTATATCAACTTTTGGTGC+CGG	+	chr4_1:83796357-83796376	Msa0579160:intron	40.0%
!!	TTAGCTTGTTAGCACTTTGG+GGG	+	chr4_1:83796686-83796705	Msa0579160:intron	40.0%
	GGGGGAAAATAACAAACTGT+TGG	+	chr4_1:83796704-83796723	Msa0579160:intron	40.0%
	CATGAATGGGTGAAAGTTGA+CGG	+	chr4_1:83797379-83797398	Msa0579160:CDS	40.0%
	TGATCATGCCCAAGATCATT+TGG	+	chr4_1:83797426-83797445	Msa0579160:CDS	40.0%
	GATCATGCCCAAGATCATTT+GGG	+	chr4_1:83797427-83797446	Msa0579160:CDS	40.0%
	CAACATCACCCAAATGATCT+TGG	-	chr4_1:83797438-83797457	None:intergenic	40.0%
	GTATGTTGAATTGCCAGAAG+TGG	+	chr4_1:83797459-83797478	Msa0579160:CDS	40.0%
!	GTGAAACAAGGAGATGGTTT+TGG	+	chr4_1:83797490-83797509	Msa0579160:CDS	40.0%
	GCAATAAAACTCACCAAAGC+AGG	-	chr4_1:83797604-83797623	None:intergenic	40.0%
	AACTCAAGCCCCTATGAAAA+TGG	+	chr4_1:83797733-83797752	Msa0579160:CDS	40.0%
	AAAGTTGAGATGAGTGACAG+TGG	+	chr4_1:83797766-83797785	Msa0579160:CDS	40.0%
	TGGCGAACTTGACAAATTGA+TGG	+	chr4_1:83797786-83797805	Msa0579160:CDS	40.0%
!	GATATTTTCCCCCTTTGCAA+TGG	+	chr4_1:83797998-83798017	Msa0579160:three_prime_UTR	40.0%
!!!	GCCCTTGTTTTCAACTAAGA+TGG	+	chr4_1:83798129-83798148	Msa0579160:three_prime_UTR	40.0%
	CATGCAACTCATTTACTAGG+GGG	-	chr4_1:83798281-83798300	None:intergenic	40.0%
	CATTCATTCAGTGTAAGTGG+TGG	+	chr4_1:83795974-83795993	Msa0579160:five_prime_UTR	40.0%
	TGAATGGTGTAGTGCACTTT+CGG	-	chr4_1:83796267-83796286	None:intergenic	40.0%
!!	CACCAAAAGTTGATATACGG+CGG	-	chr4_1:83796356-83796375	None:intergenic	40.0%
!!	CGGCACCAAAAGTTGATATA+CGG	-	chr4_1:83796359-83796378	None:intergenic	40.0%
!!	CGTATATCAACTTTTGGTGC+CGG	+	chr4_1:83796357-83796376	Msa0579160:intron	40.0%
!!	TTAGCTTGTTAGCACTTTGG+GGG	+	chr4_1:83796686-83796705	Msa0579160:intron	40.0%
	GGGGGAAAATAACAAACTGT+TGG	+	chr4_1:83796704-83796723	Msa0579160:intron	40.0%
	CATGAATGGGTGAAAGTTGA+CGG	+	chr4_1:83797379-83797398	Msa0579160:CDS	40.0%
	TGATCATGCCCAAGATCATT+TGG	+	chr4_1:83797426-83797445	Msa0579160:CDS	40.0%
	GATCATGCCCAAGATCATTT+GGG	+	chr4_1:83797427-83797446	Msa0579160:CDS	40.0%
	CAACATCACCCAAATGATCT+TGG	-	chr4_1:83797438-83797457	None:intergenic	40.0%
	GTATGTTGAATTGCCAGAAG+TGG	+	chr4_1:83797459-83797478	Msa0579160:CDS	40.0%
!	GTGAAACAAGGAGATGGTTT+TGG	+	chr4_1:83797490-83797509	Msa0579160:CDS	40.0%
	GCAATAAAACTCACCAAAGC+AGG	-	chr4_1:83797604-83797623	None:intergenic	40.0%
	AACTCAAGCCCCTATGAAAA+TGG	+	chr4_1:83797733-83797752	Msa0579160:CDS	40.0%
	AAAGTTGAGATGAGTGACAG+TGG	+	chr4_1:83797766-83797785	Msa0579160:CDS	40.0%
	TGGCGAACTTGACAAATTGA+TGG	+	chr4_1:83797786-83797805	Msa0579160:CDS	40.0%
!	GATATTTTCCCCCTTTGCAA+TGG	+	chr4_1:83797998-83798017	Msa0579160:three_prime_UTR	40.0%
!!!	GCCCTTGTTTTCAACTAAGA+TGG	+	chr4_1:83798129-83798148	Msa0579160:three_prime_UTR	40.0%
	CATGCAACTCATTTACTAGG+GGG	-	chr4_1:83798281-83798300	None:intergenic	40.0%
	AGTGGTAGGGTTAAGGAAGT+TGG	-	chr4_1:83795886-83795905	None:intergenic	45.0%
	AGTGAAGAGTGGTAGGGTTA+AGG	-	chr4_1:83795893-83795912	None:intergenic	45.0%
	AGAGAGAGTGAAGAGTGGTA+GGG	-	chr4_1:83795899-83795918	None:intergenic	45.0%
!!	TTGCTGTGGTTGGTGACAAA+GGG	-	chr4_1:83795929-83795948	None:intergenic	45.0%
!!	ATTGCTGTGGTTGGTGACAA+AGG	-	chr4_1:83795930-83795949	None:intergenic	45.0%
	ACCGCAGACAGAGAAAAAGA+TGG	+	chr4_1:83796008-83796027	Msa0579160:exon	45.0%
!	GCCATCTTTTTCTCTGTCTG+CGG	-	chr4_1:83796012-83796031	None:intergenic	45.0%
!	CAGAGAAAAAGATGGCTTGC+AGG	+	chr4_1:83796016-83796035	Msa0579160:exon	45.0%
	AGAGATCCTGAGGTATGATG+CGG	-	chr4_1:83796061-83796080	None:intergenic	45.0%
	TGTGAAAGACAGAGATCCTG+AGG	-	chr4_1:83796071-83796090	None:intergenic	45.0%
!	GTCCGCCGTATATCAACTTT+TGG	+	chr4_1:83796351-83796370	Msa0579160:intron	45.0%
	CAGATGAGAAGACAGAGACT+CGG	-	chr4_1:83797141-83797160	None:intergenic	45.0%
	GACGGAAAATCTGCAACCAT+TGG	+	chr4_1:83797397-83797416	Msa0579160:CDS	45.0%
	GGCATGATCAGTTATGCCAA+TGG	-	chr4_1:83797416-83797435	None:intergenic	45.0%
	TGAATTGCCAGAAGTGGGAA+CGG	+	chr4_1:83797465-83797484	Msa0579160:CDS	45.0%
!	TGGTGCAGTTGAAAGTGTGA+AGG	+	chr4_1:83797510-83797529	Msa0579160:CDS	45.0%
	GACATCAACTCTCCTGTTTC+AGG	+	chr4_1:83797541-83797560	Msa0579160:CDS	45.0%
	CAAGCCCCTATGAAAATGGA+TGG	+	chr4_1:83797737-83797756	Msa0579160:CDS	45.0%
	TCGGCAAGACTATCAATGAC+TGG	-	chr4_1:83797851-83797870	None:intergenic	45.0%
	AGTGGTAGGGTTAAGGAAGT+TGG	-	chr4_1:83795886-83795905	None:intergenic	45.0%
	AGTGAAGAGTGGTAGGGTTA+AGG	-	chr4_1:83795893-83795912	None:intergenic	45.0%
	AGAGAGAGTGAAGAGTGGTA+GGG	-	chr4_1:83795899-83795918	None:intergenic	45.0%
!!	TTGCTGTGGTTGGTGACAAA+GGG	-	chr4_1:83795929-83795948	None:intergenic	45.0%
!!	ATTGCTGTGGTTGGTGACAA+AGG	-	chr4_1:83795930-83795949	None:intergenic	45.0%
	ACCGCAGACAGAGAAAAAGA+TGG	+	chr4_1:83796008-83796027	Msa0579160:exon	45.0%
!	GCCATCTTTTTCTCTGTCTG+CGG	-	chr4_1:83796012-83796031	None:intergenic	45.0%
!	CAGAGAAAAAGATGGCTTGC+AGG	+	chr4_1:83796016-83796035	Msa0579160:exon	45.0%
	AGAGATCCTGAGGTATGATG+CGG	-	chr4_1:83796061-83796080	None:intergenic	45.0%
	TGTGAAAGACAGAGATCCTG+AGG	-	chr4_1:83796071-83796090	None:intergenic	45.0%
!	GTCCGCCGTATATCAACTTT+TGG	+	chr4_1:83796351-83796370	Msa0579160:intron	45.0%
	CAGATGAGAAGACAGAGACT+CGG	-	chr4_1:83797141-83797160	None:intergenic	45.0%
	GACGGAAAATCTGCAACCAT+TGG	+	chr4_1:83797397-83797416	Msa0579160:CDS	45.0%
	GGCATGATCAGTTATGCCAA+TGG	-	chr4_1:83797416-83797435	None:intergenic	45.0%
	TGAATTGCCAGAAGTGGGAA+CGG	+	chr4_1:83797465-83797484	Msa0579160:CDS	45.0%
!	TGGTGCAGTTGAAAGTGTGA+AGG	+	chr4_1:83797510-83797529	Msa0579160:CDS	45.0%
	GACATCAACTCTCCTGTTTC+AGG	+	chr4_1:83797541-83797560	Msa0579160:CDS	45.0%
	CAAGCCCCTATGAAAATGGA+TGG	+	chr4_1:83797737-83797756	Msa0579160:CDS	45.0%
	TCGGCAAGACTATCAATGAC+TGG	-	chr4_1:83797851-83797870	None:intergenic	45.0%
	GAGAGAGAGTGAAGAGTGGT+AGG	-	chr4_1:83795900-83795919	None:intergenic	50.0%
	CTGAGAGAGAGAGTGAAGAG+TGG	-	chr4_1:83795904-83795923	None:intergenic	50.0%
!	AGATGGCTTGCAGGCAGTTA+TGG	+	chr4_1:83796025-83796044	Msa0579160:exon	50.0%
!	GATGGCTTGCAGGCAGTTAT+GGG	+	chr4_1:83796026-83796045	Msa0579160:exon	50.0%
	ACGGCAGTGAAACAAGGAGA+TGG	+	chr4_1:83797484-83797503	Msa0579160:CDS	50.0%
	GAGAGAGAGTGAAGAGTGGT+AGG	-	chr4_1:83795900-83795919	None:intergenic	50.0%
	CTGAGAGAGAGAGTGAAGAG+TGG	-	chr4_1:83795904-83795923	None:intergenic	50.0%
!	AGATGGCTTGCAGGCAGTTA+TGG	+	chr4_1:83796025-83796044	Msa0579160:exon	50.0%
!	GATGGCTTGCAGGCAGTTAT+GGG	+	chr4_1:83796026-83796045	Msa0579160:exon	50.0%
	ACGGCAGTGAAACAAGGAGA+TGG	+	chr4_1:83797484-83797503	Msa0579160:CDS	50.0%
	TTCACTGCCGTTCCCACTTC+TGG	-	chr4_1:83797475-83797494	None:intergenic	55.0%
	GTGGGAACGGCAGTGAAACA+AGG	+	chr4_1:83797478-83797497	Msa0579160:CDS	55.0%
	GCTCAGCAACTCTCCTGCTT+TGG	+	chr4_1:83797588-83797607	Msa0579160:CDS	55.0%
!	TGCGCTAGCTTCTGATGCAG+AGG	+	chr4_1:83797972-83797991	Msa0579160:three_prime_UTR	55.0%
!	GCGCTAGCTTCTGATGCAGA+GGG	+	chr4_1:83797973-83797992	Msa0579160:three_prime_UTR	55.0%
	TTCACTGCCGTTCCCACTTC+TGG	-	chr4_1:83797475-83797494	None:intergenic	55.0%
	GTGGGAACGGCAGTGAAACA+AGG	+	chr4_1:83797478-83797497	Msa0579160:CDS	55.0%
	GCTCAGCAACTCTCCTGCTT+TGG	+	chr4_1:83797588-83797607	Msa0579160:CDS	55.0%
!	TGCGCTAGCTTCTGATGCAG+AGG	+	chr4_1:83797972-83797991	Msa0579160:three_prime_UTR	55.0%
!	GCGCTAGCTTCTGATGCAGA+GGG	+	chr4_1:83797973-83797992	Msa0579160:three_prime_UTR	55.0%
	CCTGAGGTATGATGCGGCTC+TGG	-	chr4_1:83796055-83796074	None:intergenic	60.0%
	CCAGAGCCGCATCATACCTC+AGG	+	chr4_1:83796052-83796071	Msa0579160:CDS	60.0%
	CCTGAGGTATGATGCGGCTC+TGG	-	chr4_1:83796055-83796074	None:intergenic	60.0%
	CCAGAGCCGCATCATACCTC+AGG	+	chr4_1:83796052-83796071	Msa0579160:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_1	gene	83795883	83798312	83795883	ID=Msa0579160;Name=Msa0579160
chr4_1	mRNA	83795883	83798312	83795883	ID=Msa0579160-mRNA-1;Parent=Msa0579160;Name=Msa0579160-mRNA-1;_AED=0.06;_eAED=0.06;_QI=144\|1\|1\|1\|1\|1\|3\|454\|155
chr4_1	exon	83795883	83796105	83795883	ID=Msa0579160-mRNA-1:exon:30619;Parent=Msa0579160-mRNA-1
chr4_1	exon	83797350	83797609	83797350	ID=Msa0579160-mRNA-1:exon:30620;Parent=Msa0579160-mRNA-1
chr4_1	exon	83797730	83798312	83797730	ID=Msa0579160-mRNA-1:exon:30621;Parent=Msa0579160-mRNA-1
chr4_1	five_prime_UTR	83795883	83796026	83795883	ID=Msa0579160-mRNA-1:five_prime_utr;Parent=Msa0579160-mRNA-1
chr4_1	CDS	83796027	83796105	83796027	ID=Msa0579160-mRNA-1:cds;Parent=Msa0579160-mRNA-1
chr4_1	CDS	83797350	83797609	83797350	ID=Msa0579160-mRNA-1:cds;Parent=Msa0579160-mRNA-1
chr4_1	CDS	83797730	83797858	83797730	ID=Msa0579160-mRNA-1:cds;Parent=Msa0579160-mRNA-1
chr4_1	three_prime_UTR	83797859	83798312	83797859	ID=Msa0579160-mRNA-1:three_prime_utr;Parent=Msa0579160-mRNA-1

Gene Sequence

>Msa0579160

ATGGCTTGCAGGCAGTTATGGGCATCCAGAGCCGCATCATACCTCAGGATCTCTGTCTTTCACAGAACCTTCTCTAACGTTCTGAACAATCTGAAGTATGCTGATTCTCATGAATGGGTGAAAGTTGACGGAAAATCTGCAACCATTGGCATAACTGATCATGCCCAAGATCATTTGGGTGATGTTGTGTATGTTGAATTGCCAGAAGTGGGAACGGCAGTGAAACAAGGAGATGGTTTTGGTGCAGTTGAAAGTGTGAAGGCAACTAGTGACATCAACTCTCCTGTTTCAGGAAAAGTGATTGAAGTTAATGAAGAGCTCAGCAACTCTCCTGCTTTGGTCAACTCAAGCCCCTATGAAAATGGATGGATAATTAAAGTTGAGATGAGTGACAGTGGCGAACTTGACAAATTGATGGATTCAGAAAAGTATACCAAGTTCTGTGAAGAAGAAGATTCCAGTCATTGA

Protein sequence

>Msa0579160

MACRQLWASRAASYLRISVFHRTFSNVLNNLKYADSHEWVKVDGKSATIGITDHAQDHLGDVVYVELPEVGTAVKQGDGFGAVESVKATSDINSPVSGKVIEVNEELSNSPALVNSSPYENGWIIKVEMSDSGELDKLMDSEKYTKFCEEEDSSH*