Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0079880 | XP_003591068.2 | 92.515 | 334 | 17 | 4 | 1 | 328 | 1 | 332 | 0.0 | 597 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0079880 | sp|Q9C7T4|BH096_ARATH | 46.450 | 338 | 131 | 9 | 14 | 326 | 1 | 313 | 1.98e-79 | 248 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0079880 | G7I7I3 | 92.515 | 334 | 17 | 4 | 1 | 328 | 1 | 332 | 0.0 | 597 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0079880 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa0079880 | -0.831327 | 1.777498e-55 | -8.615850e-47 |
| Msa0007810 | Msa0079880 | -0.809236 | 2.091191e-50 | -8.615850e-47 |
| Msa0013270 | Msa0079880 | 0.819186 | 1.325387e-52 | -8.615850e-47 |
| Msa0015570 | Msa0079880 | 0.805318 | 1.414226e-49 | -8.615850e-47 |
| Msa0017300 | Msa0079880 | -0.834281 | 3.282659e-56 | -8.615850e-47 |
| Msa0025160 | Msa0079880 | 0.807024 | 6.184904e-50 | -8.615850e-47 |
| Msa0033220 | Msa0079880 | 0.969274 | 6.979865e-130 | -8.615850e-47 |
| Msa0034700 | Msa0079880 | -0.817385 | 3.388856e-52 | -8.615850e-47 |
| Msa0038150 | Msa0079880 | -0.824768 | 6.747563e-54 | -8.615850e-47 |
| Msa0038530 | Msa0079880 | 0.821037 | 4.996535e-53 | -8.615850e-47 |
| Msa0040860 | Msa0079880 | -0.801778 | 7.667202e-49 | -8.615850e-47 |
| Msa0044160 | Msa0079880 | 0.800941 | 1.137733e-48 | -8.615850e-47 |
| Msa0044530 | Msa0079880 | -0.809830 | 1.558751e-50 | -8.615850e-47 |
| Msa0044780 | Msa0079880 | -0.810052 | 1.396072e-50 | -8.615850e-47 |
| Msa0045810 | Msa0079880 | 0.814792 | 1.286557e-51 | -8.615850e-47 |
| Msa0046200 | Msa0079880 | 0.808107 | 3.643804e-50 | -8.615850e-47 |
| Msa0056230 | Msa0079880 | -0.812215 | 4.743605e-51 | -8.615850e-47 |
| Msa0057840 | Msa0079880 | 0.802937 | 4.426001e-49 | -8.615850e-47 |
| Msa0060410 | Msa0079880 | 0.800472 | 1.418370e-48 | -8.615850e-47 |
| Msa0062190 | Msa0079880 | 0.816714 | 4.796889e-52 | -8.615850e-47 |
| Msa0063940 | Msa0079880 | 0.808236 | 3.419813e-50 | -8.615850e-47 |
| Msa0065670 | Msa0079880 | -0.831284 | 1.821778e-55 | -8.615850e-47 |
| Msa0072520 | Msa0079880 | 0.806286 | 8.855089e-50 | -8.615850e-47 |
| Msa0077570 | Msa0079880 | -0.841299 | 5.168203e-58 | -8.615850e-47 |
| Msa0079880 | Msa0080030 | 0.984017 | 2.370255e-159 | -8.615850e-47 |
| Msa0079880 | Msa0080820 | 0.819732 | 9.952397e-53 | -8.615850e-47 |
| Msa0079880 | Msa0085690 | -0.818665 | 1.741389e-52 | -8.615850e-47 |
| Msa0079880 | Msa0086620 | -0.802034 | 6.794070e-49 | -8.615850e-47 |
| Msa0079880 | Msa0091240 | -0.802401 | 5.710159e-49 | -8.615850e-47 |
| Msa0079880 | Msa0094560 | 0.826114 | 3.240748e-54 | -8.615850e-47 |
| Msa0079880 | Msa0095810 | -0.829801 | 4.200183e-55 | -8.615850e-47 |
| Msa0079880 | Msa0102240 | 0.833331 | 5.672314e-56 | -8.615850e-47 |
| Msa0079880 | Msa0106540 | 0.822659 | 2.104802e-53 | -8.615850e-47 |
| Msa0079880 | Msa0108630 | 0.802338 | 5.882431e-49 | -8.615850e-47 |
| Msa0079880 | Msa0111110 | -0.824250 | 8.938720e-54 | -8.615850e-47 |
| Msa0079880 | Msa0129930 | -0.809513 | 1.823455e-50 | -8.615850e-47 |
| Msa0079880 | Msa0132700 | 0.808640 | 2.804376e-50 | -8.615850e-47 |
| Msa0079880 | Msa0137010 | -0.802498 | 5.452973e-49 | -8.615850e-47 |
| Msa0079880 | Msa0138990 | -0.802334 | 5.892996e-49 | -8.615850e-47 |
| Msa0079880 | Msa0139500 | 0.813012 | 3.173886e-51 | -8.615850e-47 |
| Msa0079880 | Msa0142430 | 0.810626 | 1.049684e-50 | -8.615850e-47 |
| Msa0079880 | Msa0161480 | 0.830569 | 2.727434e-55 | -8.615850e-47 |
| Msa0079880 | Msa0165640 | 0.976577 | 4.309867e-142 | -8.615850e-47 |
| Msa0079880 | Msa0169410 | 0.801322 | 9.510359e-49 | -8.615850e-47 |
| Msa0079880 | Msa0173580 | -0.802227 | 6.201814e-49 | -8.615850e-47 |
| Msa0079880 | Msa0183310 | -0.803513 | 3.364048e-49 | -8.615850e-47 |
| Msa0079880 | Msa0183710 | 0.806024 | 1.005543e-49 | -8.615850e-47 |
| Msa0079880 | Msa0195140 | -0.800805 | 1.212908e-48 | -8.615850e-47 |
| Msa0079880 | Msa0195230 | 0.812554 | 3.998449e-51 | -8.615850e-47 |
| Msa0079880 | Msa0195260 | 0.811938 | 5.450357e-51 | -8.615850e-47 |
| Msa0079880 | Msa0198990 | 0.866117 | 3.605249e-65 | -8.615850e-47 |
| Msa0079880 | Msa0199650 | 0.809698 | 1.663659e-50 | -8.615850e-47 |
| Msa0079880 | Msa0203080 | 0.835560 | 1.563062e-56 | -8.615850e-47 |
| Msa0079880 | Msa0206370 | 0.833386 | 5.495119e-56 | -8.615850e-47 |
| Msa0079880 | Msa0211460 | 0.817567 | 3.084410e-52 | -8.615850e-47 |
| Msa0079880 | Msa0219280 | 0.819990 | 8.687677e-53 | -8.615850e-47 |
| Msa0079880 | Msa0229750 | -0.818651 | 1.754227e-52 | -8.615850e-47 |
| Msa0079880 | Msa0234150 | 0.811871 | 5.636956e-51 | -8.615850e-47 |
| Msa0079880 | Msa0240590 | -0.830265 | 3.236855e-55 | -8.615850e-47 |
| Msa0079880 | Msa0241750 | 0.883233 | 5.333612e-71 | -8.615850e-47 |
| Msa0079880 | Msa0246210 | 0.809528 | 1.809912e-50 | -8.615850e-47 |
| Msa0079880 | Msa0256980 | 0.829625 | 4.636522e-55 | -8.615850e-47 |
| Msa0079880 | Msa0258910 | 0.811199 | 7.891012e-51 | -8.615850e-47 |
| Msa0079880 | Msa0262750 | 0.805299 | 1.427315e-49 | -8.615850e-47 |
| Msa0079880 | Msa0267450 | -0.814009 | 1.916342e-51 | -8.615850e-47 |
| Msa0079880 | Msa0267510 | -0.818504 | 1.894168e-52 | -8.615850e-47 |
| Msa0079880 | Msa0269170 | -0.820146 | 8.002631e-53 | -8.615850e-47 |
| Msa0079880 | Msa0269220 | -0.846406 | 2.215652e-59 | -8.615850e-47 |
| Msa0079880 | Msa0276860 | 0.806205 | 9.208860e-50 | -8.615850e-47 |
| Msa0079880 | Msa0279090 | -0.828761 | 7.513302e-55 | -8.615850e-47 |
| Msa0079880 | Msa0279810 | 0.830740 | 2.477030e-55 | -8.615850e-47 |
| Msa0079880 | Msa0284800 | 0.847045 | 1.481991e-59 | -8.615850e-47 |
| Msa0079880 | Msa0287480 | 0.815755 | 7.859136e-52 | -8.615850e-47 |
| Msa0079880 | Msa0296300 | 0.819603 | 1.065153e-52 | -8.615850e-47 |
| Msa0079880 | Msa0298400 | 0.821474 | 3.961047e-53 | -8.615850e-47 |
| Msa0079880 | Msa0307430 | 0.805925 | 1.054626e-49 | -8.615850e-47 |
| Msa0079880 | Msa0313900 | 0.822029 | 2.946624e-53 | -8.615850e-47 |
| Msa0079880 | Msa0319220 | 0.833784 | 4.370075e-56 | -8.615850e-47 |
| Msa0079880 | Msa0326170 | -0.821037 | 4.996535e-53 | -8.615850e-47 |
| Msa0079880 | Msa0330520 | 0.849380 | 3.355756e-60 | -8.615850e-47 |
| Msa0079880 | Msa0336120 | 0.816187 | 6.292575e-52 | -8.615850e-47 |
| Msa0079880 | Msa0336460 | 0.810849 | 9.393341e-51 | -8.615850e-47 |
| Msa0079880 | Msa0337970 | 0.817927 | 2.557705e-52 | -8.615850e-47 |
| Msa0079880 | Msa0342840 | 0.800300 | 1.537766e-48 | -8.615850e-47 |
| Msa0079880 | Msa0354840 | 0.831699 | 1.439337e-55 | -8.615850e-47 |
| Msa0079880 | Msa0354970 | -0.836847 | 7.361882e-57 | -8.615850e-47 |
| Msa0079880 | Msa0355080 | -0.831520 | 1.593565e-55 | -8.615850e-47 |
| Msa0079880 | Msa0364030 | -0.802234 | 6.180547e-49 | -8.615850e-47 |
| Msa0079880 | Msa0365210 | 0.845839 | 3.161024e-59 | -8.615850e-47 |
| Msa0079880 | Msa0371350 | -0.842497 | 2.494029e-58 | -8.615850e-47 |
| Msa0079880 | Msa0372100 | 0.813098 | 3.040222e-51 | -8.615850e-47 |
| Msa0079880 | Msa0375330 | -0.808122 | 3.616044e-50 | -8.615850e-47 |
| Msa0079880 | Msa0384590 | 0.808145 | 3.576616e-50 | -8.615850e-47 |
| Msa0079880 | Msa0386880 | 0.820350 | 7.184133e-53 | -8.615850e-47 |
| Msa0079880 | Msa0387740 | -0.816813 | 4.557561e-52 | -8.615850e-47 |
| Msa0079880 | Msa0388210 | 0.821846 | 3.250132e-53 | -8.615850e-47 |
| Msa0079880 | Msa0401860 | -0.818182 | 2.240555e-52 | -8.615850e-47 |
| Msa0079880 | Msa0402070 | -0.839253 | 1.769480e-57 | -8.615850e-47 |
| Msa0079880 | Msa0403740 | -0.801252 | 9.829525e-49 | -8.615850e-47 |
| Msa0079880 | Msa0405460 | -0.816022 | 6.851548e-52 | -8.615850e-47 |
| Msa0079880 | Msa0405470 | -0.805740 | 1.153555e-49 | -8.615850e-47 |
| Msa0079880 | Msa0405550 | -0.808975 | 2.378149e-50 | -8.615850e-47 |
| Msa0079880 | Msa0412580 | -0.813617 | 2.337476e-51 | -8.615850e-47 |
| Msa0079880 | Msa0412790 | 0.834478 | 2.929193e-56 | -8.615850e-47 |
| Msa0079880 | Msa0419420 | -0.808070 | 3.709800e-50 | -8.615850e-47 |
| Msa0079880 | Msa0434090 | 0.800862 | 1.180987e-48 | -8.615850e-47 |
| Msa0079880 | Msa0434660 | 0.801204 | 1.005258e-48 | -8.615850e-47 |
| Msa0079880 | Msa0437440 | -0.856784 | 2.545957e-62 | -8.615850e-47 |
| Msa0079880 | Msa0437480 | 0.818243 | 2.170310e-52 | -8.615850e-47 |
| Msa0079880 | Msa0438680 | -0.824149 | 9.440447e-54 | -8.615850e-47 |
| Msa0079880 | Msa0440350 | 0.826390 | 2.784567e-54 | -8.615850e-47 |
| Msa0079880 | Msa0447870 | 0.822222 | 2.658212e-53 | -8.615850e-47 |
| Msa0079880 | Msa0457070 | -0.800467 | 1.421840e-48 | -8.615850e-47 |
| Msa0079880 | Msa0457570 | 0.832775 | 7.798232e-56 | -8.615850e-47 |
| Msa0079880 | Msa0478430 | 0.847415 | 1.173026e-59 | -8.615850e-47 |
| Msa0079880 | Msa0480900 | -0.827658 | 1.385395e-54 | -8.615850e-47 |
| Msa0079880 | Msa0481670 | 0.811414 | 7.083846e-51 | -8.615850e-47 |
| Msa0079880 | Msa0483970 | -0.808645 | 2.797333e-50 | -8.615850e-47 |
| Msa0079880 | Msa0483980 | -0.805515 | 1.286017e-49 | -8.615850e-47 |
| Msa0079880 | Msa0522540 | 0.807542 | 4.805191e-50 | -8.615850e-47 |
| Msa0079880 | Msa0525180 | -0.802528 | 5.375891e-49 | -8.615850e-47 |
| Msa0079880 | Msa0526150 | 0.800324 | 1.520316e-48 | -8.615850e-47 |
| Msa0079880 | Msa0541880 | 0.805615 | 1.225404e-49 | -8.615850e-47 |
| Msa0079880 | Msa0541940 | 0.806701 | 7.237305e-50 | -8.615850e-47 |
| Msa0079880 | Msa0549130 | 0.828962 | 6.713703e-55 | -8.615850e-47 |
| Msa0079880 | Msa0549960 | 0.811546 | 6.632126e-51 | -8.615850e-47 |
| Msa0079880 | Msa0566280 | 0.841531 | 4.490348e-58 | -8.615850e-47 |
| Msa0079880 | Msa0567330 | 0.838063 | 3.591142e-57 | -8.615850e-47 |
| Msa0079880 | Msa0567570 | 0.815843 | 7.511306e-52 | -8.615850e-47 |
| Msa0079880 | Msa0567610 | 0.867089 | 1.769217e-65 | -8.615850e-47 |
| Msa0079880 | Msa0570010 | 0.804425 | 2.174127e-49 | -8.615850e-47 |
| Msa0079880 | Msa0576320 | 0.823462 | 1.367126e-53 | -8.615850e-47 |
| Msa0079880 | Msa0579080 | 0.816551 | 5.217525e-52 | -8.615850e-47 |
| Msa0079880 | Msa0579160 | 0.830971 | 2.174749e-55 | -8.615850e-47 |
| Msa0079880 | Msa0579220 | 0.838777 | 2.351249e-57 | -8.615850e-47 |
| Msa0079880 | Msa0590620 | -0.813757 | 2.177519e-51 | -8.615850e-47 |
| Msa0079880 | Msa0591250 | -0.806305 | 8.774195e-50 | -8.615850e-47 |
| Msa0079880 | Msa0591340 | -0.806913 | 6.528252e-50 | -8.615850e-47 |
| Msa0079880 | Msa0604190 | 0.832303 | 1.021031e-55 | -8.615850e-47 |
| Msa0079880 | Msa0610690 | 0.831778 | 1.376196e-55 | -8.615850e-47 |
| Msa0079880 | Msa0610700 | -0.823368 | 1.438516e-53 | -8.615850e-47 |
| Msa0079880 | Msa0619710 | 0.806353 | 8.570607e-50 | -8.615850e-47 |
| Msa0079880 | Msa0620900 | 0.803786 | 2.951987e-49 | -8.615850e-47 |
| Msa0079880 | Msa0630440 | 0.821861 | 3.223675e-53 | -8.615850e-47 |
| Msa0079880 | Msa0645390 | 0.839438 | 1.584697e-57 | -8.615850e-47 |
| Msa0079880 | Msa0646010 | 0.817250 | 3.634765e-52 | -8.615850e-47 |
| Msa0079880 | Msa0646430 | 0.823244 | 1.537670e-53 | -8.615850e-47 |
| Msa0079880 | Msa0657710 | 0.860118 | 2.580635e-63 | -8.615850e-47 |
| Msa0079880 | Msa0657720 | 0.825817 | 3.812066e-54 | -8.615850e-47 |
| Msa0079880 | Msa0661480 | 0.813421 | 2.581725e-51 | -8.615850e-47 |
| Msa0079880 | Msa0667840 | -0.800126 | 1.667814e-48 | -8.615850e-47 |
| Msa0079880 | Msa0685610 | 0.807119 | 5.905553e-50 | -8.615850e-47 |
| Msa0079880 | Msa0686040 | 0.813492 | 2.490944e-51 | -8.615850e-47 |
| Msa0079880 | Msa0701090 | -0.812186 | 4.811083e-51 | -8.615850e-47 |
| Msa0079880 | Msa0702790 | 0.823416 | 1.401693e-53 | -8.615850e-47 |
| Msa0079880 | Msa0702800 | 0.856032 | 4.231373e-62 | -8.615850e-47 |
| Msa0079880 | Msa0703950 | 0.822295 | 2.556754e-53 | -8.615850e-47 |
| Msa0079880 | Msa0704690 | 0.804122 | 2.513335e-49 | -8.615850e-47 |
| Msa0079880 | Msa0706150 | 0.807755 | 4.328857e-50 | -8.615850e-47 |
| Msa0079880 | Msa0719270 | 0.839576 | 1.458959e-57 | -8.615850e-47 |
| Msa0079880 | Msa0719750 | 0.838144 | 3.422900e-57 | -8.615850e-47 |
| Msa0079880 | Msa0722890 | 0.813075 | 3.074551e-51 | -8.615850e-47 |
| Msa0079880 | Msa0723090 | 0.825128 | 5.549507e-54 | -8.615850e-47 |
| Msa0079880 | Msa0726170 | -0.835882 | 1.295430e-56 | -8.615850e-47 |
| Msa0079880 | Msa0733080 | 0.811004 | 8.697546e-51 | -8.615850e-47 |
| Msa0079880 | Msa0735010 | 0.814175 | 1.761642e-51 | -8.615850e-47 |
| Msa0079880 | Msa0741040 | 0.825634 | 4.212496e-54 | -8.615850e-47 |
| Msa0079880 | Msa0742370 | -0.814964 | 1.178411e-51 | -8.615850e-47 |
| Msa0079880 | Msa0745140 | 0.843716 | 1.180590e-58 | -8.615850e-47 |
| Msa0079880 | Msa0755880 | 0.801606 | 8.316550e-49 | -8.615850e-47 |
| Msa0079880 | Msa0765110 | 0.805546 | 1.267106e-49 | -8.615850e-47 |
| Msa0079880 | Msa0769910 | -0.812000 | 5.283562e-51 | -8.615850e-47 |
| Msa0079880 | Msa0774060 | 0.814158 | 1.776315e-51 | -8.615850e-47 |
| Msa0079880 | Msa0776640 | 0.845492 | 3.925784e-59 | -8.615850e-47 |
| Msa0079880 | Msa0790650 | -0.833653 | 4.712903e-56 | -8.615850e-47 |
| Msa0079880 | Msa0795750 | 0.833238 | 5.982608e-56 | -8.615850e-47 |
| Msa0079880 | Msa0797580 | 0.816011 | 6.890625e-52 | -8.615850e-47 |
| Msa0079880 | Msa0802760 | 0.837134 | 6.219485e-57 | -8.615850e-47 |
| Msa0079880 | Msa0811690 | 0.828763 | 7.504643e-55 | -8.615850e-47 |
| Msa0079880 | Msa0813160 | 0.820956 | 5.215246e-53 | -8.615850e-47 |
| Msa0079880 | Msa0821530 | 0.810898 | 9.166582e-51 | -8.615850e-47 |
| Msa0079880 | Msa0823480 | -0.812554 | 3.998123e-51 | -8.615850e-47 |
| Msa0079880 | Msa0825920 | 0.842537 | 2.433444e-58 | -8.615850e-47 |
| Msa0079880 | Msa0827340 | -0.820786 | 5.705689e-53 | -8.615850e-47 |
| Msa0079880 | Msa0828950 | 0.826482 | 2.647630e-54 | -8.615850e-47 |
| Msa0079880 | Msa0828960 | 0.857752 | 1.317293e-62 | -8.615850e-47 |
| Msa0079880 | Msa0831740 | 0.806332 | 8.660675e-50 | -8.615850e-47 |
| Msa0079880 | Msa0831800 | 0.823738 | 1.178167e-53 | -8.615850e-47 |
| Msa0079880 | Msa0840520 | 0.837086 | 6.394332e-57 | -8.615850e-47 |
| Msa0079880 | Msa0841050 | 0.846637 | 1.916858e-59 | -8.615850e-47 |
| Msa0079880 | Msa0848670 | -0.801424 | 9.062174e-49 | -8.615850e-47 |
| Msa0079880 | Msa0851850 | 0.831490 | 1.621202e-55 | -8.615850e-47 |
| Msa0079880 | Msa0853200 | -0.810384 | 1.183755e-50 | -8.615850e-47 |
| Msa0079880 | Msa0853590 | 0.805752 | 1.146871e-49 | -8.615850e-47 |
| Msa0079880 | Msa0862480 | -0.814175 | 1.761204e-51 | -8.615850e-47 |
| Msa0079880 | Msa0865420 | 0.843618 | 1.253937e-58 | -8.615850e-47 |
| Msa0079880 | Msa0867660 | -0.810351 | 1.203463e-50 | -8.615850e-47 |
| Msa0079880 | Msa0880910 | 0.820845 | 5.531909e-53 | -8.615850e-47 |
| Msa0079880 | Msa0903340 | 0.804292 | 2.316999e-49 | -8.615850e-47 |
| Msa0079880 | Msa0903590 | -0.803801 | 2.930490e-49 | -8.615850e-47 |
| Msa0079880 | Msa0908260 | -0.812903 | 3.353454e-51 | -8.615850e-47 |
| Msa0079880 | Msa0908270 | -0.830720 | 2.505108e-55 | -8.615850e-47 |
| Msa0079880 | Msa0908280 | -0.815318 | 9.832820e-52 | -8.615850e-47 |
| Msa0079880 | Msa0908350 | -0.824076 | 9.819639e-54 | -8.615850e-47 |
| Msa0079880 | Msa0908360 | -0.807836 | 4.160532e-50 | -8.615850e-47 |
| Msa0079880 | Msa0908470 | -0.818386 | 2.014017e-52 | -8.615850e-47 |
| Msa0079880 | Msa0908490 | -0.806120 | 9.599163e-50 | -8.615850e-47 |
| Msa0079880 | Msa0908500 | -0.822756 | 1.998433e-53 | -8.615850e-47 |
| Msa0079880 | Msa0908510 | -0.815204 | 1.042213e-51 | -8.615850e-47 |
| Msa0079880 | Msa0908520 | -0.802837 | 4.642561e-49 | -8.615850e-47 |
| Msa0079880 | Msa0908630 | -0.817057 | 4.017229e-52 | -8.615850e-47 |
| Msa0079880 | Msa0908690 | -0.819031 | 1.437372e-52 | -8.615850e-47 |
| Msa0079880 | Msa0908700 | -0.817396 | 3.370941e-52 | -8.615850e-47 |
| Msa0079880 | Msa0909260 | 0.846736 | 1.800598e-59 | -8.615850e-47 |
| Msa0079880 | Msa0911180 | -0.807448 | 5.031019e-50 | -8.615850e-47 |
| Msa0079880 | Msa0911220 | -0.808139 | 3.586702e-50 | -8.615850e-47 |
| Msa0079880 | Msa0924900 | -0.808674 | 2.757176e-50 | -8.615850e-47 |
| Msa0079880 | Msa0931680 | 0.804651 | 1.949758e-49 | -8.615850e-47 |
| Msa0079880 | Msa0941150 | -0.818405 | 1.993716e-52 | -8.615850e-47 |
| Msa0079880 | Msa0964400 | -0.802894 | 4.517294e-49 | -8.615850e-47 |
| Msa0079880 | Msa0967780 | 0.829819 | 4.157738e-55 | -8.615850e-47 |
| Msa0079880 | Msa0973080 | -0.814886 | 1.226171e-51 | -8.615850e-47 |
| Msa0079880 | Msa0983600 | -0.821428 | 4.059766e-53 | -8.615850e-47 |
| Msa0079880 | Msa0983610 | -0.818026 | 2.430045e-52 | -8.615850e-47 |
| Msa0079880 | Msa0994720 | 0.803684 | 3.099876e-49 | -8.615850e-47 |
| Msa0079880 | Msa1014550 | -0.806431 | 8.254218e-50 | -8.615850e-47 |
| Msa0079880 | Msa1015360 | 0.801429 | 9.040486e-49 | -8.615850e-47 |
| Msa0079880 | Msa1022420 | 0.847496 | 1.114774e-59 | -8.615850e-47 |
| Msa0079880 | Msa1029820 | 0.835635 | 1.495736e-56 | -8.615850e-47 |
| Msa0079880 | Msa1029840 | 0.802867 | 4.575731e-49 | -8.615850e-47 |
| Msa0079880 | Msa1032470 | 0.808748 | 2.658685e-50 | -8.615850e-47 |
| Msa0079880 | Msa1039440 | -0.811694 | 6.157835e-51 | -8.615850e-47 |
| Msa0079880 | Msa1041060 | 0.809398 | 1.930339e-50 | -8.615850e-47 |
| Msa0079880 | Msa1042300 | 0.830985 | 2.157234e-55 | -8.615850e-47 |
| Msa0079880 | Msa1044250 | 0.856627 | 2.831909e-62 | -8.615850e-47 |
| Msa0079880 | Msa1050260 | 0.800928 | 1.145057e-48 | -8.615850e-47 |
| Msa0079880 | Msa1052730 | 0.800502 | 1.398269e-48 | -8.615850e-47 |
| Msa0079880 | Msa1057620 | -0.810166 | 1.319468e-50 | -8.615850e-47 |
| Msa0079880 | Msa1068940 | 0.841076 | 5.917040e-58 | -8.615850e-47 |
| Msa0079880 | Msa1072250 | 0.806503 | 7.970507e-50 | -8.615850e-47 |
| Msa0079880 | Msa1078280 | -0.807832 | 4.167969e-50 | -8.615850e-47 |
| Msa0079880 | Msa1078590 | -0.801694 | 7.978980e-49 | -8.615850e-47 |
| Msa0079880 | Msa1078760 | -0.813674 | 2.271183e-51 | -8.615850e-47 |
| Msa0079880 | Msa1082410 | 0.828243 | 1.001686e-54 | -8.615850e-47 |
| Msa0079880 | Msa1086760 | -0.814411 | 1.561606e-51 | -8.615850e-47 |
| Msa0079880 | Msa1086770 | -0.813965 | 1.959096e-51 | -8.615850e-47 |
| Msa0079880 | Msa1086940 | -0.816138 | 6.453763e-52 | -8.615850e-47 |
| Msa0079880 | Msa1087070 | -0.815628 | 8.386295e-52 | -8.615850e-47 |
| Msa0079880 | Msa1087080 | -0.817986 | 2.480666e-52 | -8.615850e-47 |
| Msa0079880 | Msa1087090 | -0.817925 | 2.561108e-52 | -8.615850e-47 |
| Msa0079880 | Msa1088740 | -0.814367 | 1.597570e-51 | -8.615850e-47 |
| Msa0079880 | Msa1094810 | 0.807288 | 5.439232e-50 | -8.615850e-47 |
| Msa0079880 | Msa1101610 | -0.808544 | 2.939717e-50 | -8.615850e-47 |
| Msa0079880 | Msa1101980 | -0.812906 | 3.349132e-51 | -8.615850e-47 |
| Msa0079880 | Msa1102060 | -0.818523 | 1.875308e-52 | -8.615850e-47 |
| Msa0079880 | Msa1106590 | 0.836454 | 9.268972e-57 | -8.615850e-47 |
| Msa0079880 | Msa1111910 | 0.832518 | 9.029989e-56 | -8.615850e-47 |
| Msa0079880 | Msa1115600 | 0.829577 | 4.761878e-55 | -8.615850e-47 |
| Msa0079880 | Msa1123490 | -0.820592 | 6.322217e-53 | -8.615850e-47 |
| Msa0079880 | Msa1123970 | 0.800704 | 1.272306e-48 | -8.615850e-47 |
| Msa0079880 | Msa1129120 | -0.801336 | 9.446371e-49 | -8.615850e-47 |
| Msa0079880 | Msa1133750 | 0.812741 | 3.639459e-51 | -8.615850e-47 |
| Msa0079880 | Msa1149910 | 0.845763 | 3.314702e-59 | -8.615850e-47 |
| Msa0079880 | Msa1154320 | 0.837869 | 4.028856e-57 | -8.615850e-47 |
| Msa0079880 | Msa1156710 | 0.833757 | 4.438875e-56 | -8.615850e-47 |
| Msa0079880 | Msa1156720 | 0.805002 | 1.647125e-49 | -8.615850e-47 |
| Msa0079880 | Msa1164680 | 0.815372 | 9.562515e-52 | -8.615850e-47 |
| Msa0079880 | Msa1165460 | 0.817902 | 2.591929e-52 | -8.615850e-47 |
| Msa0079880 | Msa1169650 | 0.800754 | 1.242710e-48 | -8.615850e-47 |
| Msa0079880 | Msa1183910 | 0.801901 | 7.235257e-49 | -8.615850e-47 |
| Msa0079880 | Msa1184680 | 0.817476 | 3.232485e-52 | -8.615850e-47 |
| Msa0079880 | Msa1190350 | -0.802502 | 5.443060e-49 | -8.615850e-47 |
| Msa0079880 | Msa1191530 | -0.815435 | 9.257147e-52 | -8.615850e-47 |
| Msa0079880 | Msa1192360 | 0.860861 | 1.537822e-63 | -8.615850e-47 |
| Msa0079880 | Msa1194240 | 0.814909 | 1.211637e-51 | -8.615850e-47 |
| Msa0079880 | Msa1197720 | 0.813053 | 3.110284e-51 | -8.615850e-47 |
| Msa0079880 | Msa1205270 | -0.802663 | 5.042377e-49 | -8.615850e-47 |
| Msa0079880 | Msa1207920 | -0.809308 | 2.017318e-50 | -8.615850e-47 |
| Msa0079880 | Msa1214310 | 0.803349 | 3.637157e-49 | -8.615850e-47 |
| Msa0079880 | Msa1217890 | 0.815392 | 9.467344e-52 | -8.615850e-47 |
| Msa0079880 | Msa1221130 | 0.818600 | 1.801289e-52 | -8.615850e-47 |
| Msa0079880 | Msa1228580 | 0.826363 | 2.826478e-54 | -8.615850e-47 |
| Msa0079880 | Msa1228630 | 0.800224 | 1.593072e-48 | -8.615850e-47 |
| Msa0079880 | Msa1231440 | 0.808857 | 2.520479e-50 | -8.615850e-47 |
| Msa0079880 | Msa1242130 | 0.817612 | 3.012912e-52 | -8.615850e-47 |
| Msa0079880 | Msa1242160 | 0.833414 | 5.408078e-56 | -8.615850e-47 |
| Msa0079880 | Msa1246830 | 0.830886 | 2.280877e-55 | -8.615850e-47 |
| Msa0079880 | Msa1250610 | 0.834262 | 3.318649e-56 | -8.615850e-47 |
| Msa0079880 | Msa1250660 | 0.850063 | 2.163142e-60 | -8.615850e-47 |
| Msa0079880 | Msa1253520 | 0.812868 | 3.414538e-51 | -8.615850e-47 |
| Msa0079880 | Msa1255030 | -0.812586 | 3.934321e-51 | -8.615850e-47 |
| Msa0079880 | Msa1257200 | 0.806450 | 8.178806e-50 | -8.615850e-47 |
| Msa0079880 | Msa1261160 | 0.812720 | 3.679053e-51 | -8.615850e-47 |
| Msa0079880 | Msa1266120 | -0.816942 | 4.263453e-52 | -8.615850e-47 |
| Msa0079880 | Msa1278000 | 0.802205 | 6.266196e-49 | -8.615850e-47 |
| Msa0079880 | Msa1283930 | 0.851806 | 6.979309e-61 | -8.615850e-47 |
| Msa0079880 | Msa1283960 | 0.826040 | 3.373070e-54 | -8.615850e-47 |
| Msa0079880 | Msa1283980 | 0.817341 | 3.467369e-52 | -8.615850e-47 |
| Msa0079880 | Msa1284020 | 0.811801 | 5.837589e-51 | -8.615850e-47 |
| Msa0079880 | Msa1286860 | -0.822297 | 2.554632e-53 | -8.615850e-47 |
| Msa0079880 | Msa1287100 | -0.820400 | 6.999772e-53 | -8.615850e-47 |
| Msa0079880 | Msa1288070 | 0.849980 | 2.282633e-60 | -8.615850e-47 |
| Msa0079880 | Msa1290380 | 0.810552 | 1.089126e-50 | -8.615850e-47 |
| Msa0079880 | Msa1290440 | 0.811524 | 6.707171e-51 | -8.615850e-47 |
| Msa0079880 | Msa1295210 | -0.829559 | 4.809888e-55 | -8.615850e-47 |
| Msa0079880 | Msa1295480 | -0.843959 | 1.016580e-58 | -8.615850e-47 |
| Msa0079880 | Msa1297220 | -0.806488 | 8.029308e-50 | -8.615850e-47 |
| Msa0079880 | Msa1308850 | 0.819569 | 1.083941e-52 | -8.615850e-47 |
| Msa0079880 | Msa1322960 | 0.852778 | 3.692577e-61 | -8.615850e-47 |
| Msa0079880 | Msa1322980 | 0.834296 | 3.253222e-56 | -8.615850e-47 |
| Msa0079880 | Msa1323070 | 0.813934 | 1.990707e-51 | -8.615850e-47 |
| Msa0079880 | Msa1326640 | 0.819718 | 1.002327e-52 | -8.615850e-47 |
| Msa0079880 | Msa1326680 | 0.829399 | 5.261086e-55 | -8.615850e-47 |
| Msa0079880 | Msa1326710 | 0.825053 | 5.780767e-54 | -8.615850e-47 |
| Msa0079880 | Msa1327800 | 0.804603 | 1.995914e-49 | -8.615850e-47 |
| Msa0079880 | Msa1331570 | -0.834104 | 3.634428e-56 | -8.615850e-47 |
| Msa0079880 | Msa1342360 | -0.800101 | 1.687564e-48 | -8.615850e-47 |
| Msa0079880 | Msa1348170 | -0.815157 | 1.067728e-51 | -8.615850e-47 |
| Msa0079880 | Msa1349690 | 0.811161 | 8.038356e-51 | -8.615850e-47 |
| Msa0079880 | Msa1352580 | 0.803345 | 3.644368e-49 | -8.615850e-47 |
| Msa0079880 | Msa1352600 | -0.808079 | 3.693911e-50 | -8.615850e-47 |
| Msa0079880 | Msa1354360 | -0.817390 | 3.379887e-52 | -8.615850e-47 |
| Msa0079880 | Msa1354370 | -0.817530 | 3.144305e-52 | -8.615850e-47 |
| Msa0079880 | Msa1354400 | -0.814468 | 1.517526e-51 | -8.615850e-47 |
| Msa0079880 | Msa1354510 | -0.801279 | 9.706588e-49 | -8.615850e-47 |
| Msa0079880 | Msa1354520 | -0.819587 | 1.073772e-52 | -8.615850e-47 |
| Msa0079880 | Msa1354530 | -0.816902 | 4.351671e-52 | -8.615850e-47 |
| Msa0079880 | Msa1354650 | -0.819067 | 1.410684e-52 | -8.615850e-47 |
| Msa0079880 | Msa1354660 | -0.817236 | 3.661868e-52 | -8.615850e-47 |
| Msa0079880 | Msa1354780 | -0.818143 | 2.285751e-52 | -8.615850e-47 |
| Msa0079880 | Msa1354790 | -0.815819 | 7.605552e-52 | -8.615850e-47 |
| Msa0079880 | Msa1354960 | -0.817396 | 3.370941e-52 | -8.615850e-47 |
| Msa0079880 | Msa1357070 | 0.815810 | 7.640567e-52 | -8.615850e-47 |
| Msa0079880 | Msa1365820 | 0.803054 | 4.186586e-49 | -8.615850e-47 |
| Msa0079880 | Msa1365990 | -0.813222 | 2.855631e-51 | -8.615850e-47 |
| Msa0079880 | Msa1366020 | -0.818780 | 1.639781e-52 | -8.615850e-47 |
| Msa0079880 | Msa1366030 | -0.812670 | 3.773106e-51 | -8.615850e-47 |
| Msa0079880 | Msa1366060 | -0.813031 | 3.143983e-51 | -8.615850e-47 |
| Msa0079880 | Msa1366140 | -0.840984 | 6.255983e-58 | -8.615850e-47 |
| Msa0079880 | Msa1368260 | -0.819779 | 9.708144e-53 | -8.615850e-47 |
| Msa0079880 | Msa1368390 | 0.824526 | 7.697517e-54 | -8.615850e-47 |
| Msa0079880 | Msa1372000 | 0.847252 | 1.300731e-59 | -8.615850e-47 |
| Msa0079880 | Msa1381030 | 0.801937 | 7.112452e-49 | -8.615850e-47 |
| Msa0079880 | Msa1385360 | -0.813771 | 2.162050e-51 | -8.615850e-47 |
| Msa0079880 | Msa1385390 | -0.814078 | 1.850325e-51 | -8.615850e-47 |
| Msa0079880 | Msa1386130 | 0.801199 | 1.007666e-48 | -8.615850e-47 |
| Msa0079880 | Msa1387450 | -0.842990 | 1.844563e-58 | -8.615850e-47 |
| Msa0079880 | Msa1388720 | -0.802755 | 4.825167e-49 | -8.615850e-47 |
| Msa0079880 | Msa1389820 | 0.844110 | 9.260180e-59 | -8.615850e-47 |
| Msa0079880 | Msa1391130 | -0.817305 | 3.533263e-52 | -8.615850e-47 |
| Msa0079880 | Msa1391140 | -0.812868 | 3.414538e-51 | -8.615850e-47 |
| Msa0079880 | Msa1391260 | -0.814995 | 1.159333e-51 | -8.615850e-47 |
| Msa0079880 | Msa1391500 | 0.813104 | 3.030049e-51 | -8.615850e-47 |
| Msa0079880 | Msa1392740 | 0.806617 | 7.541200e-50 | -8.615850e-47 |
| Msa0079880 | Msa1396200 | -0.859880 | 3.044369e-63 | -8.615850e-47 |
| Msa0079880 | Msa1401300 | 0.829475 | 5.043050e-55 | -8.615850e-47 |
| Msa0079880 | Msa1405830 | 0.821435 | 4.044810e-53 | -8.615850e-47 |
| Msa0079880 | Msa1407810 | 0.831382 | 1.723018e-55 | -8.615850e-47 |
| Msa0079880 | Msa1407840 | 0.864714 | 9.969566e-65 | -8.615850e-47 |
| Msa0079880 | Msa1413130 | 0.808212 | 3.460752e-50 | -8.615850e-47 |
| Msa0079880 | Msa1414780 | -0.806766 | 7.012328e-50 | -8.615850e-47 |
| Msa0079880 | Msa1417370 | 0.824207 | 9.145529e-54 | -8.615850e-47 |
| Msa0079880 | Msa1422860 | 0.870410 | 1.490547e-66 | -8.615850e-47 |
| Msa0079880 | Msa1428230 | -0.810779 | 9.725889e-51 | -8.615850e-47 |
| Msa0079880 | Msa1433360 | 0.853663 | 2.059794e-61 | -8.615850e-47 |
| Msa0079880 | Msa1433570 | 0.827154 | 1.829799e-54 | -8.615850e-47 |
| Msa0079880 | Msa1436620 | 0.837733 | 4.366460e-57 | -8.615850e-47 |
| Msa0079880 | Msa1437780 | 0.831845 | 1.325202e-55 | -8.615850e-47 |
| Msa0079880 | Msa1437810 | 0.862850 | 3.782669e-64 | -8.615850e-47 |
| Msa0079880 | Msa1440430 | 0.804104 | 2.535150e-49 | -8.615850e-47 |
| Msa0079880 | Msa1445530 | 0.845785 | 3.269848e-59 | -8.615850e-47 |
| Msa0079880 | Msa1450290 | 0.812704 | 3.708231e-51 | -8.615850e-47 |
| Msa0079880 | Msa1454500 | 0.859311 | 4.516113e-63 | -8.615850e-47 |
| Msa0079880 | Msa1456040 | 0.815678 | 8.176294e-52 | -8.615850e-47 |
| Msa0079880 | Msa1461770 | 0.820574 | 6.381893e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0079880 | MtrunA17_Chr1g0191571 | 92.515 | 334 | 17 | 4 | 1 | 328 | 1 | 332 | 0.0 | 597 |
| Msa0079880 | MtrunA17_Chr7g0273081 | 57.101 | 338 | 95 | 11 | 1 | 323 | 1 | 303 | 2.97e-119 | 346 |
| Msa0079880 | MtrunA17_Chr3g0132471 | 50.000 | 324 | 133 | 7 | 14 | 323 | 1 | 309 | 8.28e-98 | 291 |
| Msa0079880 | MtrunA17_Chr5g0426851 | 42.902 | 317 | 152 | 7 | 14 | 326 | 1 | 292 | 1.48e-77 | 239 |
| Msa0079880 | MtrunA17_Chr8g0366551 | 53.398 | 206 | 85 | 2 | 126 | 326 | 114 | 313 | 1.20e-71 | 225 |
| Msa0079880 | MtrunA17_Chr8g0345871 | 50.990 | 202 | 89 | 2 | 126 | 327 | 171 | 362 | 3.68e-58 | 191 |
| Msa0079880 | MtrunA17_Chr0c01g0489461 | 47.727 | 220 | 96 | 5 | 118 | 324 | 177 | 390 | 1.15e-57 | 191 |
| Msa0079880 | MtrunA17_Chr1g0158941 | 33.218 | 289 | 144 | 8 | 54 | 321 | 30 | 290 | 5.60e-36 | 131 |
| Msa0079880 | MtrunA17_Chr2g0287761 | 40.860 | 186 | 107 | 2 | 136 | 321 | 1 | 183 | 4.95e-35 | 126 |
| Msa0079880 | MtrunA17_Chr3g0126381 | 27.273 | 198 | 102 | 4 | 165 | 321 | 1 | 197 | 7.05e-15 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0079880 | AT1G72210.1 | 46.450 | 338 | 131 | 9 | 14 | 326 | 1 | 313 | 2.01e-80 | 248 |
| Msa0079880 | AT1G22490.1 | 43.620 | 337 | 133 | 11 | 14 | 328 | 1 | 302 | 6.26e-77 | 238 |
| Msa0079880 | AT1G72210.2 | 46.667 | 315 | 118 | 9 | 14 | 303 | 1 | 290 | 1.16e-72 | 227 |
| Msa0079880 | AT1G22490.2 | 43.910 | 312 | 118 | 11 | 14 | 303 | 1 | 277 | 1.10e-67 | 215 |
| Msa0079880 | AT3G24140.2 | 44.091 | 220 | 108 | 3 | 115 | 322 | 176 | 392 | 8.33e-54 | 181 |
| Msa0079880 | AT3G24140.1 | 44.091 | 220 | 108 | 3 | 115 | 322 | 176 | 392 | 1.18e-53 | 181 |
| Msa0079880 | AT4G01460.1 | 43.478 | 207 | 105 | 2 | 126 | 327 | 105 | 304 | 7.61e-52 | 174 |
| Msa0079880 | AT4G01460.2 | 43.478 | 207 | 105 | 2 | 126 | 327 | 105 | 304 | 7.61e-52 | 174 |
| Msa0079880 | AT5G46690.1 | 45.575 | 226 | 90 | 4 | 126 | 324 | 78 | 297 | 2.57e-50 | 170 |
| Msa0079880 | AT5G65320.1 | 45.238 | 210 | 105 | 4 | 124 | 328 | 90 | 294 | 2.74e-49 | 167 |
| Msa0079880 | AT3G61950.2 | 45.455 | 198 | 94 | 3 | 126 | 322 | 117 | 301 | 1.11e-47 | 163 |
| Msa0079880 | AT2G46810.2 | 46.701 | 197 | 92 | 4 | 127 | 322 | 112 | 296 | 1.85e-47 | 162 |
| Msa0079880 | AT3G61950.1 | 45.000 | 200 | 96 | 3 | 126 | 324 | 168 | 354 | 3.53e-47 | 163 |
| Msa0079880 | AT2G46810.1 | 46.535 | 202 | 89 | 5 | 127 | 324 | 184 | 370 | 6.60e-47 | 162 |
| Msa0079880 | AT2G46810.3 | 47.000 | 200 | 87 | 5 | 127 | 322 | 172 | 356 | 6.66e-47 | 162 |
| Msa0079880 | AT5G65320.2 | 46.196 | 184 | 90 | 3 | 124 | 303 | 90 | 268 | 5.92e-43 | 150 |
| Msa0079880 | AT2G46810.4 | 41.667 | 228 | 86 | 6 | 127 | 322 | 112 | 324 | 8.46e-42 | 148 |
| Msa0079880 | AT3G61950.6 | 46.667 | 165 | 75 | 2 | 126 | 290 | 117 | 268 | 1.58e-41 | 146 |
| Msa0079880 | AT3G61950.3 | 46.667 | 165 | 75 | 2 | 126 | 290 | 168 | 319 | 6.11e-41 | 146 |
| Msa0079880 | AT5G46690.2 | 44.390 | 205 | 81 | 4 | 126 | 303 | 78 | 276 | 3.23e-40 | 143 |
| Msa0079880 | AT3G06120.1 | 37.234 | 188 | 95 | 2 | 136 | 309 | 1 | 179 | 2.85e-32 | 119 |
| Msa0079880 | AT5G53210.1 | 56.923 | 65 | 28 | 0 | 134 | 198 | 100 | 164 | 5.80e-20 | 89.7 |
| Msa0079880 | AT5G53210.2 | 56.923 | 65 | 28 | 0 | 134 | 198 | 100 | 164 | 6.37e-20 | 89.7 |
| Msa0079880 | AT3G61950.4 | 71.429 | 42 | 12 | 0 | 126 | 167 | 168 | 209 | 5.03e-13 | 67.8 |
| Msa0079880 | AT3G61950.5 | 71.429 | 42 | 12 | 0 | 126 | 167 | 168 | 209 | 5.03e-13 | 67.8 |
| Msa0079880 | AT1G32640.1 | 26.531 | 196 | 110 | 7 | 116 | 303 | 435 | 604 | 9.12e-11 | 63.5 |
Find 61 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAGAGAGATTAATTTATA+AGG | 0.220721 | 1_2:+57952159 | None:intergenic |
| CAATTTCTATTATGACAATT+TGG | 0.224028 | 1_2:+57951824 | None:intergenic |
| TATTATGACAATTTGGCTTA+TGG | 0.230201 | 1_2:+57951831 | None:intergenic |
| AGAATTGACCAATAACTATT+AGG | 0.272210 | 1_2:+57951898 | None:intergenic |
| GAGACAAACCTAATAGTTAT+TGG | 0.272992 | 1_2:-57951906 | Msa0079880:three_prime_UTR |
| TACCGACCTTGGTTGGAAAT+TGG | 0.285875 | 1_2:-57951876 | Msa0079880:three_prime_UTR |
| TCTTTGATTCCATAACTAAA+AGG | 0.292800 | 1_2:+57953493 | None:intergenic |
| GGTGATCAAGCTTCTATAAT+TGG | 0.293785 | 1_2:-57952786 | Msa0079880:CDS |
| ACTCTATCTCTTTCCTCTTC+AGG | 0.299868 | 1_2:+57953562 | None:intergenic |
| CAGCTCTTGAAAATGGTATC+TGG | 0.309667 | 1_2:-57952486 | Msa0079880:CDS |
| TTTATTACTCTATAAATTAT+GGG | 0.313329 | 1_2:-57952058 | Msa0079880:three_prime_UTR |
| CATCTTCCACTTTCCCTTGA+AGG | 0.316778 | 1_2:-57953619 | Msa0079880:five_prime_UTR |
| AATGAAAAGAATTCAGAAAA+TGG | 0.318161 | 1_2:+57952657 | None:intergenic |
| GCCAAAACAGCTCTTGAAAA+TGG | 0.324313 | 1_2:-57952493 | Msa0079880:CDS |
| TCTAATTCTGCAGCTACTAT+TGG | 0.326308 | 1_2:-57952609 | Msa0079880:CDS |
| GTTGAAGATGATTGCAAGTT+GGG | 0.350399 | 1_2:-57952273 | Msa0079880:CDS |
| CATTTAAATGTTACTACTAC+TGG | 0.355694 | 1_2:-57952435 | Msa0079880:CDS |
| ATTGTCCTCCTTATGTAGAT+TGG | 0.357399 | 1_2:-57953381 | Msa0079880:CDS |
| TTTCTTGAACTTCATTCAAA+TGG | 0.360903 | 1_2:+57953329 | None:intergenic |
| CTAAAAGGATCTTGTGTTTG+TGG | 0.365756 | 1_2:+57953508 | None:intergenic |
| TTCTTGAACTTCATTCAAAT+GGG | 0.379399 | 1_2:+57953330 | None:intergenic |
| TCTTTACTCTCTCAGTGTTA+AGG | 0.389543 | 1_2:-57952403 | Msa0079880:intron |
| ATAAATTATGGGCTCCTTGA+AGG | 0.390704 | 1_2:-57952047 | Msa0079880:three_prime_UTR |
| TGTTGAATCTATTGACCATC+TGG | 0.393376 | 1_2:+57952220 | None:intergenic |
| AAAGAGAGATAGAGATCAAA+AGG | 0.422136 | 1_2:+57951974 | None:intergenic |
| ACCCTTTGGATGTAAGAATC+TGG | 0.440881 | 1_2:+57953091 | None:intergenic |
| GGTTGAAGATGATTGCAAGT+TGG | 0.450829 | 1_2:-57952274 | Msa0079880:CDS |
| TTGTTATTCCAATCTACATA+AGG | 0.465642 | 1_2:+57953373 | None:intergenic |
| TTAAAATAAGATCAAGAAAG+AGG | 0.490885 | 1_2:-57952515 | Msa0079880:CDS |
| TGCCAGATTCTTACATCCAA+AGG | 0.505226 | 1_2:-57953093 | Msa0079880:CDS |
| AGAACATAAATAACATAAGA+AGG | 0.508911 | 1_2:+57952008 | None:intergenic |
| TCAATTCTACCGACCTTGGT+TGG | 0.511856 | 1_2:-57951883 | Msa0079880:three_prime_UTR |
| TTGTATCCTTCAAGGGAAAG+TGG | 0.515956 | 1_2:+57953613 | None:intergenic |
| GCCAGATTCTTACATCCAAA+GGG | 0.516817 | 1_2:-57953092 | Msa0079880:intron |
| TTAGTAATAGTATTACTACT+TGG | 0.517777 | 1_2:+57953295 | None:intergenic |
| TGTTATGTGTTTACCTGAAG+AGG | 0.521964 | 1_2:-57953575 | Msa0079880:exon |
| TTGGTCAATTCTACCGACCT+TGG | 0.525815 | 1_2:-57951887 | Msa0079880:three_prime_UTR |
| ACACAGTTATTCGTCCGAAA+AGG | 0.534814 | 1_2:-57953237 | Msa0079880:CDS |
| GACCTTGGTTGGAAATTGGT+AGG | 0.552383 | 1_2:-57951872 | Msa0079880:three_prime_UTR |
| GATCAAGCTTCTATAATTGG+AGG | 0.557225 | 1_2:-57952783 | Msa0079880:CDS |
| TGAACTTCATTCAAATGGGG+TGG | 0.566537 | 1_2:+57953334 | None:intergenic |
| CAAGGGAAAGTGGAAGATGA+TGG | 0.572160 | 1_2:+57953623 | None:intergenic |
| ATTACTACTTGGATCAGTAG+TGG | 0.576946 | 1_2:+57953306 | None:intergenic |
| TGATTGCAAGTTGGGATCAG+TGG | 0.579380 | 1_2:-57952265 | Msa0079880:CDS |
| AGACACATCTCTTGAGAGAG+AGG | 0.582709 | 1_2:+57952105 | None:intergenic |
| TTATCACTTGTTGAATACTG+TGG | 0.584055 | 1_2:+57952633 | None:intergenic |
| AGCTTCAGCTGTATACCAGA+TGG | 0.597796 | 1_2:-57952235 | Msa0079880:CDS |
| TGGTCAATAGATTCAACAAG+AGG | 0.599611 | 1_2:-57952215 | Msa0079880:CDS |
| TATGTAGATTGGAATAACAA+TGG | 0.602597 | 1_2:-57953370 | Msa0079880:CDS |
| TTATTCCAATCTACATAAGG+AGG | 0.614549 | 1_2:+57953376 | None:intergenic |
| TCTTGAACTTCATTCAAATG+GGG | 0.614700 | 1_2:+57953331 | None:intergenic |
| ACGAATAACTGTGTTCACAG+AGG | 0.614740 | 1_2:+57953246 | None:intergenic |
| CGAATAACTGTGTTCACAGA+GGG | 0.620805 | 1_2:+57953247 | None:intergenic |
| TACCAATTTCCAACCAAGGT+CGG | 0.623713 | 1_2:+57951874 | None:intergenic |
| GTCCTACCAATTTCCAACCA+AGG | 0.632676 | 1_2:+57951870 | None:intergenic |
| AGACATGGCACTAGAAGCAG+TGG | 0.632855 | 1_2:-57953536 | Msa0079880:CDS |
| AAGAGATAGAGTGAAAGACA+TGG | 0.656321 | 1_2:-57953551 | Msa0079880:CDS |
| GTGAAATCTGATGAAGCTGG+TGG | 0.684533 | 1_2:-57952693 | Msa0079880:CDS |
| TGCTGACATAGAAGTGACAA+TGG | 0.687267 | 1_2:-57952556 | Msa0079880:CDS |
| GAAGTGAAATCTGATGAAGC+TGG | 0.693568 | 1_2:-57952696 | Msa0079880:CDS |
| TGACATAGAAGTGACAATGG+TGG | 0.780182 | 1_2:-57952553 | Msa0079880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTACTCTATAAATTA+TGG | - | chr1_2:57953345-57953364 | Msa0079880:CDS | 10.0% |
| !! | TTTATTACTCTATAAATTAT+GGG | - | chr1_2:57953346-57953365 | Msa0079880:CDS | 10.0% |
| !!! | TTTTATTACTCTATAAATTA+TGG | - | chr1_2:57953345-57953364 | Msa0079880:CDS | 10.0% |
| !! | TTTATTACTCTATAAATTAT+GGG | - | chr1_2:57953346-57953365 | Msa0079880:CDS | 10.0% |
| !!! | GCATTGAATTTTTTTTATTT+AGG | - | chr1_2:57953109-57953128 | Msa0079880:CDS | 15.0% |
| !! | TATAAGGTTAAAAAACTAAA+TGG | + | chr1_2:57953232-57953251 | None:intergenic | 15.0% |
| !!! | GCATTGAATTTTTTTTATTT+AGG | - | chr1_2:57953109-57953128 | Msa0079880:CDS | 15.0% |
| !! | TATAAGGTTAAAAAACTAAA+TGG | + | chr1_2:57953232-57953251 | None:intergenic | 15.0% |
| !!! | ATTTTATTTGTATCCTTCAA+GGG | + | chr1_2:57951801-57951820 | None:intergenic | 20.0% |
| !!! | AATTTTATTTGTATCCTTCA+AGG | + | chr1_2:57951802-57951821 | None:intergenic | 20.0% |
| !! | TTAGTAATAGTATTACTACT+TGG | + | chr1_2:57952112-57952131 | None:intergenic | 20.0% |
| !! | AATGAAAAGAATTCAGAAAA+TGG | + | chr1_2:57952750-57952769 | None:intergenic | 20.0% |
| !!! | ATCTTATTTTAAGATTTGCA+TGG | + | chr1_2:57952881-57952900 | None:intergenic | 20.0% |
| !! | TTAAAATAAGATCAAGAAAG+AGG | - | chr1_2:57952889-57952908 | Msa0079880:intron | 20.0% |
| !! | AGAACATAAATAACATAAGA+AGG | + | chr1_2:57953399-57953418 | None:intergenic | 20.0% |
| !! | CAATTTCTATTATGACAATT+TGG | + | chr1_2:57953583-57953602 | None:intergenic | 20.0% |
| !!! | ATTTTATTTGTATCCTTCAA+GGG | + | chr1_2:57951801-57951820 | None:intergenic | 20.0% |
| !!! | AATTTTATTTGTATCCTTCA+AGG | + | chr1_2:57951802-57951821 | None:intergenic | 20.0% |
| !! | TTAGTAATAGTATTACTACT+TGG | + | chr1_2:57952112-57952131 | None:intergenic | 20.0% |
| !! | AATGAAAAGAATTCAGAAAA+TGG | + | chr1_2:57952750-57952769 | None:intergenic | 20.0% |
| !!! | ATCTTATTTTAAGATTTGCA+TGG | + | chr1_2:57952881-57952900 | None:intergenic | 20.0% |
| !! | TTAAAATAAGATCAAGAAAG+AGG | - | chr1_2:57952889-57952908 | Msa0079880:intron | 20.0% |
| !! | AGAACATAAATAACATAAGA+AGG | + | chr1_2:57953399-57953418 | None:intergenic | 20.0% |
| !! | CAATTTCTATTATGACAATT+TGG | + | chr1_2:57953583-57953602 | None:intergenic | 20.0% |
| ! | TCTTTGATTCCATAACTAAA+AGG | + | chr1_2:57951914-57951933 | None:intergenic | 25.0% |
| !! | TTGTTATTCCAATCTACATA+AGG | + | chr1_2:57952034-57952053 | None:intergenic | 25.0% |
| ! | TATGTAGATTGGAATAACAA+TGG | - | chr1_2:57952034-57952053 | Msa0079880:three_prime_UTR | 25.0% |
| ! | TTCTTGAACTTCATTCAAAT+GGG | + | chr1_2:57952077-57952096 | None:intergenic | 25.0% |
| ! | TTTCTTGAACTTCATTCAAA+TGG | + | chr1_2:57952078-57952097 | None:intergenic | 25.0% |
| !!! | GTGTTTGTTTTTTTTGTTGT+TGG | - | chr1_2:57952586-57952605 | Msa0079880:CDS | 25.0% |
| ! | CATTTAAATGTTACTACTAC+TGG | - | chr1_2:57952969-57952988 | Msa0079880:intron | 25.0% |
| ! | GAGAGAGAGATTAATTTATA+AGG | + | chr1_2:57953248-57953267 | None:intergenic | 25.0% |
| ! | TAAACCAAAAAATTCCTTCA+AGG | + | chr1_2:57953374-57953393 | None:intergenic | 25.0% |
| ! | AGAATTGACCAATAACTATT+AGG | + | chr1_2:57953509-57953528 | None:intergenic | 25.0% |
| !! | TATTATGACAATTTGGCTTA+TGG | + | chr1_2:57953576-57953595 | None:intergenic | 25.0% |
| ! | TCTTTGATTCCATAACTAAA+AGG | + | chr1_2:57951914-57951933 | None:intergenic | 25.0% |
| !! | TTGTTATTCCAATCTACATA+AGG | + | chr1_2:57952034-57952053 | None:intergenic | 25.0% |
| ! | TATGTAGATTGGAATAACAA+TGG | - | chr1_2:57952034-57952053 | Msa0079880:three_prime_UTR | 25.0% |
| ! | TTCTTGAACTTCATTCAAAT+GGG | + | chr1_2:57952077-57952096 | None:intergenic | 25.0% |
| ! | TTTCTTGAACTTCATTCAAA+TGG | + | chr1_2:57952078-57952097 | None:intergenic | 25.0% |
| !!! | GTGTTTGTTTTTTTTGTTGT+TGG | - | chr1_2:57952586-57952605 | Msa0079880:CDS | 25.0% |
| ! | CATTTAAATGTTACTACTAC+TGG | - | chr1_2:57952969-57952988 | Msa0079880:intron | 25.0% |
| ! | GAGAGAGAGATTAATTTATA+AGG | + | chr1_2:57953248-57953267 | None:intergenic | 25.0% |
| ! | TAAACCAAAAAATTCCTTCA+AGG | + | chr1_2:57953374-57953393 | None:intergenic | 25.0% |
| ! | AGAATTGACCAATAACTATT+AGG | + | chr1_2:57953509-57953528 | None:intergenic | 25.0% |
| !! | TATTATGACAATTTGGCTTA+TGG | + | chr1_2:57953576-57953595 | None:intergenic | 25.0% |
| !! | ACACAAGATCCTTTTAGTTA+TGG | - | chr1_2:57951902-57951921 | Msa0079880:three_prime_UTR | 30.0% |
| ! | GAGGACAATTATTTTCTGTT+TGG | + | chr1_2:57952012-57952031 | None:intergenic | 30.0% |
| TTATTCCAATCTACATAAGG+AGG | + | chr1_2:57952031-57952050 | None:intergenic | 30.0% | |
| TCTTGAACTTCATTCAAATG+GGG | + | chr1_2:57952076-57952095 | None:intergenic | 30.0% | |
| ! | TTATCACTTGTTGAATACTG+TGG | + | chr1_2:57952774-57952793 | None:intergenic | 30.0% |
| AAAGAGAGATAGAGATCAAA+AGG | + | chr1_2:57953433-57953452 | None:intergenic | 30.0% | |
| ! | ATCTCTATCTCTCTTTTGTT+TGG | - | chr1_2:57953437-57953456 | Msa0079880:CDS | 30.0% |
| !! | TCTCTATCTCTCTTTTGTTT+GGG | - | chr1_2:57953438-57953457 | Msa0079880:CDS | 30.0% |
| GAGACAAACCTAATAGTTAT+TGG | - | chr1_2:57953498-57953517 | Msa0079880:CDS | 30.0% | |
| !! | ACACAAGATCCTTTTAGTTA+TGG | - | chr1_2:57951902-57951921 | Msa0079880:three_prime_UTR | 30.0% |
| ! | GAGGACAATTATTTTCTGTT+TGG | + | chr1_2:57952012-57952031 | None:intergenic | 30.0% |
| TTATTCCAATCTACATAAGG+AGG | + | chr1_2:57952031-57952050 | None:intergenic | 30.0% | |
| TCTTGAACTTCATTCAAATG+GGG | + | chr1_2:57952076-57952095 | None:intergenic | 30.0% | |
| ! | TTATCACTTGTTGAATACTG+TGG | + | chr1_2:57952774-57952793 | None:intergenic | 30.0% |
| AAAGAGAGATAGAGATCAAA+AGG | + | chr1_2:57953433-57953452 | None:intergenic | 30.0% | |
| ! | ATCTCTATCTCTCTTTTGTT+TGG | - | chr1_2:57953437-57953456 | Msa0079880:CDS | 30.0% |
| !! | TCTCTATCTCTCTTTTGTTT+GGG | - | chr1_2:57953438-57953457 | Msa0079880:CDS | 30.0% |
| GAGACAAACCTAATAGTTAT+TGG | - | chr1_2:57953498-57953517 | Msa0079880:CDS | 30.0% | |
| TGTTATGTGTTTACCTGAAG+AGG | - | chr1_2:57951829-57951848 | Msa0079880:three_prime_UTR | 35.0% | |
| AAGAGATAGAGTGAAAGACA+TGG | - | chr1_2:57951853-57951872 | Msa0079880:three_prime_UTR | 35.0% | |
| CTAAAAGGATCTTGTGTTTG+TGG | + | chr1_2:57951899-57951918 | None:intergenic | 35.0% | |
| ATTGTCCTCCTTATGTAGAT+TGG | - | chr1_2:57952023-57952042 | Msa0079880:three_prime_UTR | 35.0% | |
| ATTACTACTTGGATCAGTAG+TGG | + | chr1_2:57952101-57952120 | None:intergenic | 35.0% | |
| TGTAAGTAGTAAGTACCCTT+TGG | + | chr1_2:57952330-57952349 | None:intergenic | 35.0% | |
| CAGTGAGTTTAGTAGAATCA+CGG | - | chr1_2:57952381-57952400 | Msa0079880:intron | 35.0% | |
| AACATGCAGTTACATGTTCT+TGG | - | chr1_2:57952484-57952503 | Msa0079880:CDS | 35.0% | |
| ! | AGCTCTGGTAATCTAAAGTT+CGG | + | chr1_2:57952520-57952539 | None:intergenic | 35.0% |
| !!! | TTTTTGTTGTTGGTGAATGC+AGG | - | chr1_2:57952596-57952615 | Msa0079880:CDS | 35.0% |
| !!! | TTTTGTTGTTGGTGAATGCA+GGG | - | chr1_2:57952597-57952616 | Msa0079880:CDS | 35.0% |
| GGTGATCAAGCTTCTATAAT+TGG | - | chr1_2:57952618-57952637 | Msa0079880:CDS | 35.0% | |
| GATCAAGCTTCTATAATTGG+AGG | - | chr1_2:57952621-57952640 | Msa0079880:CDS | 35.0% | |
| ! | GAGCACAAGTTTCATTTTCT+TGG | - | chr1_2:57952669-57952688 | Msa0079880:CDS | 35.0% |
| TCTAATTCTGCAGCTACTAT+TGG | - | chr1_2:57952795-57952814 | Msa0079880:intron | 35.0% | |
| GCTACTATTGGTGAAAAAGT+TGG | - | chr1_2:57952807-57952826 | Msa0079880:intron | 35.0% | |
| !! | ACCATTTTCAAGAGCTGTTT+TGG | + | chr1_2:57952915-57952934 | None:intergenic | 35.0% |
| TCTTTACTCTCTCAGTGTTA+AGG | - | chr1_2:57953001-57953020 | Msa0079880:intron | 35.0% | |
| GTTGAAGATGATTGCAAGTT+GGG | - | chr1_2:57953131-57953150 | Msa0079880:CDS | 35.0% | |
| TGTTGAATCTATTGACCATC+TGG | + | chr1_2:57953187-57953206 | None:intergenic | 35.0% | |
| TGGTCAATAGATTCAACAAG+AGG | - | chr1_2:57953189-57953208 | Msa0079880:CDS | 35.0% | |
| ATAAATTATGGGCTCCTTGA+AGG | - | chr1_2:57953357-57953376 | Msa0079880:CDS | 35.0% | |
| !! | CTCTATCTCTCTTTTGTTTG+GGG | - | chr1_2:57953439-57953458 | Msa0079880:CDS | 35.0% |
| !! | TCTTTTGTTTGGGGTTAATG+TGG | - | chr1_2:57953448-57953467 | Msa0079880:CDS | 35.0% |
| TGTTATGTGTTTACCTGAAG+AGG | - | chr1_2:57951829-57951848 | Msa0079880:three_prime_UTR | 35.0% | |
| AAGAGATAGAGTGAAAGACA+TGG | - | chr1_2:57951853-57951872 | Msa0079880:three_prime_UTR | 35.0% | |
| CTAAAAGGATCTTGTGTTTG+TGG | + | chr1_2:57951899-57951918 | None:intergenic | 35.0% | |
| ATTGTCCTCCTTATGTAGAT+TGG | - | chr1_2:57952023-57952042 | Msa0079880:three_prime_UTR | 35.0% | |
| ATTACTACTTGGATCAGTAG+TGG | + | chr1_2:57952101-57952120 | None:intergenic | 35.0% | |
| TGTAAGTAGTAAGTACCCTT+TGG | + | chr1_2:57952330-57952349 | None:intergenic | 35.0% | |
| CAGTGAGTTTAGTAGAATCA+CGG | - | chr1_2:57952381-57952400 | Msa0079880:intron | 35.0% | |
| AACATGCAGTTACATGTTCT+TGG | - | chr1_2:57952484-57952503 | Msa0079880:CDS | 35.0% | |
| ! | AGCTCTGGTAATCTAAAGTT+CGG | + | chr1_2:57952520-57952539 | None:intergenic | 35.0% |
| !!! | TTTTTGTTGTTGGTGAATGC+AGG | - | chr1_2:57952596-57952615 | Msa0079880:CDS | 35.0% |
| !!! | TTTTGTTGTTGGTGAATGCA+GGG | - | chr1_2:57952597-57952616 | Msa0079880:CDS | 35.0% |
| GGTGATCAAGCTTCTATAAT+TGG | - | chr1_2:57952618-57952637 | Msa0079880:CDS | 35.0% | |
| GATCAAGCTTCTATAATTGG+AGG | - | chr1_2:57952621-57952640 | Msa0079880:CDS | 35.0% | |
| ! | GAGCACAAGTTTCATTTTCT+TGG | - | chr1_2:57952669-57952688 | Msa0079880:CDS | 35.0% |
| TCTAATTCTGCAGCTACTAT+TGG | - | chr1_2:57952795-57952814 | Msa0079880:intron | 35.0% | |
| GCTACTATTGGTGAAAAAGT+TGG | - | chr1_2:57952807-57952826 | Msa0079880:intron | 35.0% | |
| !! | ACCATTTTCAAGAGCTGTTT+TGG | + | chr1_2:57952915-57952934 | None:intergenic | 35.0% |
| TCTTTACTCTCTCAGTGTTA+AGG | - | chr1_2:57953001-57953020 | Msa0079880:intron | 35.0% | |
| GTTGAAGATGATTGCAAGTT+GGG | - | chr1_2:57953131-57953150 | Msa0079880:CDS | 35.0% | |
| TGTTGAATCTATTGACCATC+TGG | + | chr1_2:57953187-57953206 | None:intergenic | 35.0% | |
| TGGTCAATAGATTCAACAAG+AGG | - | chr1_2:57953189-57953208 | Msa0079880:CDS | 35.0% | |
| ATAAATTATGGGCTCCTTGA+AGG | - | chr1_2:57953357-57953376 | Msa0079880:CDS | 35.0% | |
| !! | CTCTATCTCTCTTTTGTTTG+GGG | - | chr1_2:57953439-57953458 | Msa0079880:CDS | 35.0% |
| !! | TCTTTTGTTTGGGGTTAATG+TGG | - | chr1_2:57953448-57953467 | Msa0079880:CDS | 35.0% |
| TTGTATCCTTCAAGGGAAAG+TGG | + | chr1_2:57951794-57951813 | None:intergenic | 40.0% | |
| ACTCTATCTCTTTCCTCTTC+AGG | + | chr1_2:57951845-57951864 | None:intergenic | 40.0% | |
| TGAACTTCATTCAAATGGGG+TGG | + | chr1_2:57952073-57952092 | None:intergenic | 40.0% | |
| CGAATAACTGTGTTCACAGA+GGG | + | chr1_2:57952160-57952179 | None:intergenic | 40.0% | |
| ACGAATAACTGTGTTCACAG+AGG | + | chr1_2:57952161-57952180 | None:intergenic | 40.0% | |
| ACACAGTTATTCGTCCGAAA+AGG | - | chr1_2:57952167-57952186 | Msa0079880:three_prime_UTR | 40.0% | |
| TGCCAGATTCTTACATCCAA+AGG | - | chr1_2:57952311-57952330 | Msa0079880:intron | 40.0% | |
| GCCAGATTCTTACATCCAAA+GGG | - | chr1_2:57952312-57952331 | Msa0079880:intron | 40.0% | |
| ACCCTTTGGATGTAAGAATC+TGG | + | chr1_2:57952316-57952335 | None:intergenic | 40.0% | |
| ! | TCCCTTCTTCTAGAAACTAG+AGG | - | chr1_2:57952539-57952558 | Msa0079880:CDS | 40.0% |
| ! | CCCTCTAGTTTCTAGAAGAA+GGG | + | chr1_2:57952543-57952562 | None:intergenic | 40.0% |
| ! | CCCTTCTTCTAGAAACTAGA+GGG | - | chr1_2:57952540-57952559 | Msa0079880:CDS | 40.0% |
| GAAGTGAAATCTGATGAAGC+TGG | - | chr1_2:57952708-57952727 | Msa0079880:CDS | 40.0% | |
| TGCTGACATAGAAGTGACAA+TGG | - | chr1_2:57952848-57952867 | Msa0079880:intron | 40.0% | |
| TGACATAGAAGTGACAATGG+TGG | - | chr1_2:57952851-57952870 | Msa0079880:intron | 40.0% | |
| GCCAAAACAGCTCTTGAAAA+TGG | - | chr1_2:57952911-57952930 | Msa0079880:intron | 40.0% | |
| CAGCTCTTGAAAATGGTATC+TGG | - | chr1_2:57952918-57952937 | Msa0079880:intron | 40.0% | |
| GGTTGAAGATGATTGCAAGT+TGG | - | chr1_2:57953130-57953149 | Msa0079880:CDS | 40.0% | |
| !!! | GGCTCCTTGAAGGAATTTTT+TGG | - | chr1_2:57953367-57953386 | Msa0079880:CDS | 40.0% |
| TACCAATTTCCAACCAAGGT+CGG | + | chr1_2:57953533-57953552 | None:intergenic | 40.0% | |
| TTGTATCCTTCAAGGGAAAG+TGG | + | chr1_2:57951794-57951813 | None:intergenic | 40.0% | |
| ACTCTATCTCTTTCCTCTTC+AGG | + | chr1_2:57951845-57951864 | None:intergenic | 40.0% | |
| TGAACTTCATTCAAATGGGG+TGG | + | chr1_2:57952073-57952092 | None:intergenic | 40.0% | |
| CGAATAACTGTGTTCACAGA+GGG | + | chr1_2:57952160-57952179 | None:intergenic | 40.0% | |
| ACGAATAACTGTGTTCACAG+AGG | + | chr1_2:57952161-57952180 | None:intergenic | 40.0% | |
| ACACAGTTATTCGTCCGAAA+AGG | - | chr1_2:57952167-57952186 | Msa0079880:three_prime_UTR | 40.0% | |
| TGCCAGATTCTTACATCCAA+AGG | - | chr1_2:57952311-57952330 | Msa0079880:intron | 40.0% | |
| GCCAGATTCTTACATCCAAA+GGG | - | chr1_2:57952312-57952331 | Msa0079880:intron | 40.0% | |
| ACCCTTTGGATGTAAGAATC+TGG | + | chr1_2:57952316-57952335 | None:intergenic | 40.0% | |
| ! | TCCCTTCTTCTAGAAACTAG+AGG | - | chr1_2:57952539-57952558 | Msa0079880:CDS | 40.0% |
| ! | CCCTCTAGTTTCTAGAAGAA+GGG | + | chr1_2:57952543-57952562 | None:intergenic | 40.0% |
| ! | CCCTTCTTCTAGAAACTAGA+GGG | - | chr1_2:57952540-57952559 | Msa0079880:CDS | 40.0% |
| GAAGTGAAATCTGATGAAGC+TGG | - | chr1_2:57952708-57952727 | Msa0079880:CDS | 40.0% | |
| TGCTGACATAGAAGTGACAA+TGG | - | chr1_2:57952848-57952867 | Msa0079880:intron | 40.0% | |
| TGACATAGAAGTGACAATGG+TGG | - | chr1_2:57952851-57952870 | Msa0079880:intron | 40.0% | |
| GCCAAAACAGCTCTTGAAAA+TGG | - | chr1_2:57952911-57952930 | Msa0079880:intron | 40.0% | |
| CAGCTCTTGAAAATGGTATC+TGG | - | chr1_2:57952918-57952937 | Msa0079880:intron | 40.0% | |
| GGTTGAAGATGATTGCAAGT+TGG | - | chr1_2:57953130-57953149 | Msa0079880:CDS | 40.0% | |
| !!! | GGCTCCTTGAAGGAATTTTT+TGG | - | chr1_2:57953367-57953386 | Msa0079880:CDS | 40.0% |
| TACCAATTTCCAACCAAGGT+CGG | + | chr1_2:57953533-57953552 | None:intergenic | 40.0% | |
| CAAGGGAAAGTGGAAGATGA+TGG | + | chr1_2:57951784-57951803 | None:intergenic | 45.0% | |
| CATCTTCCACTTTCCCTTGA+AGG | - | chr1_2:57951785-57951804 | Msa0079880:three_prime_UTR | 45.0% | |
| CAAATGGGGTGGTGAAAAAG+TGG | + | chr1_2:57952062-57952081 | None:intergenic | 45.0% | |
| ! | TTTCTAGAAGAAGGGAGCTC+TGG | + | chr1_2:57952535-57952554 | None:intergenic | 45.0% |
| ! | GCCCTCTAGTTTCTAGAAGA+AGG | + | chr1_2:57952544-57952563 | None:intergenic | 45.0% |
| GTGAAATCTGATGAAGCTGG+TGG | - | chr1_2:57952711-57952730 | Msa0079880:CDS | 45.0% | |
| ! | TGATTGCAAGTTGGGATCAG+TGG | - | chr1_2:57953139-57953158 | Msa0079880:CDS | 45.0% |
| AGCTTCAGCTGTATACCAGA+TGG | - | chr1_2:57953169-57953188 | Msa0079880:CDS | 45.0% | |
| AGACACATCTCTTGAGAGAG+AGG | + | chr1_2:57953302-57953321 | None:intergenic | 45.0% | |
| TTGGTCAATTCTACCGACCT+TGG | - | chr1_2:57953517-57953536 | Msa0079880:CDS | 45.0% | |
| TCAATTCTACCGACCTTGGT+TGG | - | chr1_2:57953521-57953540 | Msa0079880:CDS | 45.0% | |
| TACCGACCTTGGTTGGAAAT+TGG | - | chr1_2:57953528-57953547 | Msa0079880:CDS | 45.0% | |
| GACCTTGGTTGGAAATTGGT+AGG | - | chr1_2:57953532-57953551 | Msa0079880:CDS | 45.0% | |
| GTCCTACCAATTTCCAACCA+AGG | + | chr1_2:57953537-57953556 | None:intergenic | 45.0% | |
| CAAGGGAAAGTGGAAGATGA+TGG | + | chr1_2:57951784-57951803 | None:intergenic | 45.0% | |
| CATCTTCCACTTTCCCTTGA+AGG | - | chr1_2:57951785-57951804 | Msa0079880:three_prime_UTR | 45.0% | |
| CAAATGGGGTGGTGAAAAAG+TGG | + | chr1_2:57952062-57952081 | None:intergenic | 45.0% | |
| ! | TTTCTAGAAGAAGGGAGCTC+TGG | + | chr1_2:57952535-57952554 | None:intergenic | 45.0% |
| ! | GCCCTCTAGTTTCTAGAAGA+AGG | + | chr1_2:57952544-57952563 | None:intergenic | 45.0% |
| GTGAAATCTGATGAAGCTGG+TGG | - | chr1_2:57952711-57952730 | Msa0079880:CDS | 45.0% | |
| ! | TGATTGCAAGTTGGGATCAG+TGG | - | chr1_2:57953139-57953158 | Msa0079880:CDS | 45.0% |
| AGCTTCAGCTGTATACCAGA+TGG | - | chr1_2:57953169-57953188 | Msa0079880:CDS | 45.0% | |
| AGACACATCTCTTGAGAGAG+AGG | + | chr1_2:57953302-57953321 | None:intergenic | 45.0% | |
| TTGGTCAATTCTACCGACCT+TGG | - | chr1_2:57953517-57953536 | Msa0079880:CDS | 45.0% | |
| TCAATTCTACCGACCTTGGT+TGG | - | chr1_2:57953521-57953540 | Msa0079880:CDS | 45.0% | |
| TACCGACCTTGGTTGGAAAT+TGG | - | chr1_2:57953528-57953547 | Msa0079880:CDS | 45.0% | |
| GACCTTGGTTGGAAATTGGT+AGG | - | chr1_2:57953532-57953551 | Msa0079880:CDS | 45.0% | |
| GTCCTACCAATTTCCAACCA+AGG | + | chr1_2:57953537-57953556 | None:intergenic | 45.0% | |
| AGACATGGCACTAGAAGCAG+TGG | - | chr1_2:57951868-57951887 | Msa0079880:three_prime_UTR | 50.0% | |
| !!! | CTTCTAGCTCTGCGCCTTTT+CGG | + | chr1_2:57952184-57952203 | None:intergenic | 50.0% |
| AGACATGGCACTAGAAGCAG+TGG | - | chr1_2:57951868-57951887 | Msa0079880:three_prime_UTR | 50.0% | |
| !!! | CTTCTAGCTCTGCGCCTTTT+CGG | + | chr1_2:57952184-57952203 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 57951776 | 57953650 | 57951776 | ID=Msa0079880;Name=Msa0079880 |
| chr1_2 | mRNA | 57951776 | 57953650 | 57951776 | ID=Msa0079880-mRNA-1;Parent=Msa0079880;Name=Msa0079880-mRNA-1;_AED=0.03;_eAED=0.03;_QI=57|1|1|1|1|1|3|430|331 |
| chr1_2 | exon | 57951776 | 57952295 | 57951776 | ID=Msa0079880-mRNA-1:exon:18470;Parent=Msa0079880-mRNA-1 |
| chr1_2 | exon | 57952404 | 57952808 | 57952404 | ID=Msa0079880-mRNA-1:exon:18469;Parent=Msa0079880-mRNA-1 |
| chr1_2 | exon | 57953093 | 57953650 | 57953093 | ID=Msa0079880-mRNA-1:exon:18468;Parent=Msa0079880-mRNA-1 |
| chr1_2 | five_prime_UTR | 57953594 | 57953650 | 57953594 | ID=Msa0079880-mRNA-1:five_prime_utr;Parent=Msa0079880-mRNA-1 |
| chr1_2 | CDS | 57953093 | 57953593 | 57953093 | ID=Msa0079880-mRNA-1:cds;Parent=Msa0079880-mRNA-1 |
| chr1_2 | CDS | 57952404 | 57952808 | 57952404 | ID=Msa0079880-mRNA-1:cds;Parent=Msa0079880-mRNA-1 |
| chr1_2 | CDS | 57952206 | 57952295 | 57952206 | ID=Msa0079880-mRNA-1:cds;Parent=Msa0079880-mRNA-1 |
| chr1_2 | three_prime_UTR | 57951776 | 57952205 | 57951776 | ID=Msa0079880-mRNA-1:three_prime_utr;Parent=Msa0079880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
