Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0355080 | XP_013459405.1 | 99.259 | 135 | 1 | 0 | 1 | 135 | 1 | 135 | 3.51e-87 | 273 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0355080 | A0A072UVL6 | 99.259 | 135 | 1 | 0 | 1 | 135 | 1 | 135 | 1.68e-87 | 273 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa0355080 | 0.850544 | 1.585712e-60 | -8.615850e-47 |
| Msa0006080 | Msa0355080 | -0.805349 | 1.393647e-49 | -8.615850e-47 |
| Msa0007810 | Msa0355080 | 0.862587 | 4.560770e-64 | -8.615850e-47 |
| Msa0026250 | Msa0355080 | -0.815089 | 1.105447e-51 | -8.615850e-47 |
| Msa0026780 | Msa0355080 | -0.806924 | 6.495344e-50 | -8.615850e-47 |
| Msa0033220 | Msa0355080 | -0.854310 | 1.340066e-61 | -8.615850e-47 |
| Msa0033670 | Msa0355080 | 0.804935 | 1.701100e-49 | -8.615850e-47 |
| Msa0034100 | Msa0355080 | 0.813851 | 2.076464e-51 | -8.615850e-47 |
| Msa0034700 | Msa0355080 | 0.866225 | 3.330298e-65 | -8.615850e-47 |
| Msa0038150 | Msa0355080 | 0.837380 | 5.378830e-57 | -8.615850e-47 |
| Msa0042950 | Msa0355080 | 0.822010 | 2.978053e-53 | -8.615850e-47 |
| Msa0044440 | Msa0355080 | -0.827920 | 1.198237e-54 | -8.615850e-47 |
| Msa0044530 | Msa0355080 | 0.846903 | 1.621353e-59 | -8.615850e-47 |
| Msa0056230 | Msa0355080 | 0.861353 | 1.089409e-63 | -8.615850e-47 |
| Msa0057770 | Msa0355080 | 0.810920 | 9.067410e-51 | -8.615850e-47 |
| Msa0063940 | Msa0355080 | -0.879212 | 1.498670e-69 | -8.615850e-47 |
| Msa0065670 | Msa0355080 | 0.830002 | 3.752429e-55 | -8.615850e-47 |
| Msa0066890 | Msa0355080 | 0.868578 | 5.883833e-66 | -8.615850e-47 |
| Msa0075990 | Msa0355080 | 0.806353 | 8.571462e-50 | -8.615850e-47 |
| Msa0077570 | Msa0355080 | 0.834177 | 3.484598e-56 | -8.615850e-47 |
| Msa0079880 | Msa0355080 | -0.831520 | 1.593565e-55 | -8.615850e-47 |
| Msa0080030 | Msa0355080 | -0.844609 | 6.801915e-59 | -8.615850e-47 |
| Msa0080820 | Msa0355080 | -0.838670 | 2.505386e-57 | -8.615850e-47 |
| Msa0081790 | Msa0355080 | 0.815338 | 9.729377e-52 | -8.615850e-47 |
| Msa0091220 | Msa0355080 | 0.834919 | 2.268581e-56 | -8.615850e-47 |
| Msa0091240 | Msa0355080 | 0.840816 | 6.923957e-58 | -8.615850e-47 |
| Msa0094170 | Msa0355080 | 0.821251 | 4.458446e-53 | -8.615850e-47 |
| Msa0094560 | Msa0355080 | -0.811522 | 6.713159e-51 | -8.615850e-47 |
| Msa0095810 | Msa0355080 | 0.858666 | 7.043333e-63 | -8.615850e-47 |
| Msa0101530 | Msa0355080 | -0.814846 | 1.251459e-51 | -8.615850e-47 |
| Msa0105650 | Msa0355080 | -0.823773 | 1.156563e-53 | -8.615850e-47 |
| Msa0111110 | Msa0355080 | 0.839827 | 1.255182e-57 | -8.615850e-47 |
| Msa0112880 | Msa0355080 | 0.801581 | 8.415856e-49 | -8.615850e-47 |
| Msa0128110 | Msa0355080 | 0.816244 | 6.111979e-52 | -8.615850e-47 |
| Msa0129930 | Msa0355080 | 0.858645 | 7.147781e-63 | -8.615850e-47 |
| Msa0133140 | Msa0355080 | 0.859714 | 3.416689e-63 | -8.615850e-47 |
| Msa0136180 | Msa0355080 | 0.850767 | 1.372579e-60 | -8.615850e-47 |
| Msa0136870 | Msa0355080 | 0.833846 | 4.217798e-56 | -8.615850e-47 |
| Msa0138990 | Msa0355080 | 0.821468 | 3.973714e-53 | -8.615850e-47 |
| Msa0151510 | Msa0355080 | 0.801274 | 9.728696e-49 | -8.615850e-47 |
| Msa0154880 | Msa0355080 | 0.869795 | 2.369328e-66 | -8.615850e-47 |
| Msa0154890 | Msa0355080 | 0.854041 | 1.602320e-61 | -8.615850e-47 |
| Msa0161480 | Msa0355080 | -0.812703 | 3.710567e-51 | -8.615850e-47 |
| Msa0165640 | Msa0355080 | -0.845362 | 4.258339e-59 | -8.615850e-47 |
| Msa0173600 | Msa0355080 | 0.833216 | 6.056895e-56 | -8.615850e-47 |
| Msa0173950 | Msa0355080 | 0.803436 | 3.488798e-49 | -8.615850e-47 |
| Msa0175240 | Msa0355080 | 0.800396 | 1.469895e-48 | -8.615850e-47 |
| Msa0177020 | Msa0355080 | 0.814256 | 1.690510e-51 | -8.615850e-47 |
| Msa0178840 | Msa0355080 | 0.828455 | 8.903284e-55 | -8.615850e-47 |
| Msa0183310 | Msa0355080 | 0.879597 | 1.094308e-69 | -8.615850e-47 |
| Msa0186400 | Msa0355080 | 0.837987 | 3.758277e-57 | -8.615850e-47 |
| Msa0189250 | Msa0355080 | 0.835491 | 1.626569e-56 | -8.615850e-47 |
| Msa0189560 | Msa0355080 | 0.825869 | 3.705657e-54 | -8.615850e-47 |
| Msa0198990 | Msa0355080 | -0.801301 | 9.604110e-49 | -8.615850e-47 |
| Msa0216150 | Msa0355080 | 0.805618 | 1.223913e-49 | -8.615850e-47 |
| Msa0219280 | Msa0355080 | -0.862909 | 3.627761e-64 | -8.615850e-47 |
| Msa0225790 | Msa0355080 | 0.815697 | 8.094443e-52 | -8.615850e-47 |
| Msa0229750 | Msa0355080 | 0.838493 | 2.782699e-57 | -8.615850e-47 |
| Msa0234150 | Msa0355080 | -0.807991 | 3.857474e-50 | -8.615850e-47 |
| Msa0240590 | Msa0355080 | 0.803340 | 3.653162e-49 | -8.615850e-47 |
| Msa0241750 | Msa0355080 | -0.826538 | 2.567626e-54 | -8.615850e-47 |
| Msa0258910 | Msa0355080 | -0.821861 | 3.223187e-53 | -8.615850e-47 |
| Msa0260580 | Msa0355080 | 0.818108 | 2.328356e-52 | -8.615850e-47 |
| Msa0260640 | Msa0355080 | 0.816365 | 5.743011e-52 | -8.615850e-47 |
| Msa0261460 | Msa0355080 | -0.802478 | 5.504377e-49 | -8.615850e-47 |
| Msa0261660 | Msa0355080 | 0.804912 | 1.719763e-49 | -8.615850e-47 |
| Msa0266140 | Msa0355080 | 0.815746 | 7.892961e-52 | -8.615850e-47 |
| Msa0267320 | Msa0355080 | 0.813768 | 2.165891e-51 | -8.615850e-47 |
| Msa0267450 | Msa0355080 | 0.820976 | 5.160977e-53 | -8.615850e-47 |
| Msa0267510 | Msa0355080 | 0.825380 | 4.838431e-54 | -8.615850e-47 |
| Msa0269220 | Msa0355080 | 0.858389 | 8.519809e-63 | -8.615850e-47 |
| Msa0270830 | Msa0355080 | 0.816119 | 6.517009e-52 | -8.615850e-47 |
| Msa0279090 | Msa0355080 | 0.809601 | 1.745872e-50 | -8.615850e-47 |
| Msa0279810 | Msa0355080 | -0.816791 | 4.608173e-52 | -8.615850e-47 |
| Msa0286630 | Msa0355080 | -0.814061 | 1.866377e-51 | -8.615850e-47 |
| Msa0287480 | Msa0355080 | -0.821958 | 3.061107e-53 | -8.615850e-47 |
| Msa0293070 | Msa0355080 | 0.814199 | 1.739516e-51 | -8.615850e-47 |
| Msa0298400 | Msa0355080 | -0.838676 | 2.496676e-57 | -8.615850e-47 |
| Msa0304060 | Msa0355080 | 0.801688 | 8.000937e-49 | -8.615850e-47 |
| Msa0307380 | Msa0355080 | -0.803913 | 2.778050e-49 | -8.615850e-47 |
| Msa0319220 | Msa0355080 | -0.805007 | 1.643070e-49 | -8.615850e-47 |
| Msa0326170 | Msa0355080 | 0.840774 | 7.099873e-58 | -8.615850e-47 |
| Msa0331070 | Msa0355080 | 0.807678 | 4.494792e-50 | -8.615850e-47 |
| Msa0334450 | Msa0355080 | 0.808023 | 3.796068e-50 | -8.615850e-47 |
| Msa0336120 | Msa0355080 | -0.843310 | 1.515407e-58 | -8.615850e-47 |
| Msa0354970 | Msa0355080 | 0.938998 | 2.654812e-99 | -8.615850e-47 |
| Msa0355080 | Msa0364030 | 0.806129 | 9.557224e-50 | -8.615850e-47 |
| Msa0355080 | Msa0364910 | 0.806102 | 9.683182e-50 | -8.615850e-47 |
| Msa0355080 | Msa0365210 | -0.834675 | 2.613092e-56 | -8.615850e-47 |
| Msa0355080 | Msa0371350 | 0.844182 | 8.856851e-59 | -8.615850e-47 |
| Msa0355080 | Msa0373120 | 0.812397 | 4.327086e-51 | -8.615850e-47 |
| Msa0355080 | Msa0375330 | 0.805541 | 1.270195e-49 | -8.615850e-47 |
| Msa0355080 | Msa0375790 | -0.801207 | 1.004029e-48 | -8.615850e-47 |
| Msa0355080 | Msa0382060 | 0.816084 | 6.636298e-52 | -8.615850e-47 |
| Msa0355080 | Msa0384590 | -0.870175 | 1.780028e-66 | -8.615850e-47 |
| Msa0355080 | Msa0384780 | 0.821880 | 3.191364e-53 | -8.615850e-47 |
| Msa0355080 | Msa0385850 | 0.809028 | 2.316241e-50 | -8.615850e-47 |
| Msa0355080 | Msa0385930 | 0.841517 | 4.528624e-58 | -8.615850e-47 |
| Msa0355080 | Msa0387740 | 0.840359 | 9.120961e-58 | -8.615850e-47 |
| Msa0355080 | Msa0402070 | 0.913929 | 3.478396e-84 | -8.615850e-47 |
| Msa0355080 | Msa0403740 | 0.805357 | 1.387845e-49 | -8.615850e-47 |
| Msa0355080 | Msa0412580 | 0.829701 | 4.443482e-55 | -8.615850e-47 |
| Msa0355080 | Msa0419420 | 0.826504 | 2.616260e-54 | -8.615850e-47 |
| Msa0355080 | Msa0421220 | 0.846043 | 2.783369e-59 | -8.615850e-47 |
| Msa0355080 | Msa0434660 | -0.861904 | 7.392458e-64 | -8.615850e-47 |
| Msa0355080 | Msa0435130 | 0.837959 | 3.819615e-57 | -8.615850e-47 |
| Msa0355080 | Msa0436440 | -0.800173 | 1.631458e-48 | -8.615850e-47 |
| Msa0355080 | Msa0437440 | 0.909750 | 4.032664e-82 | -8.615850e-47 |
| Msa0355080 | Msa0438150 | 0.804124 | 2.511210e-49 | -8.615850e-47 |
| Msa0355080 | Msa0438680 | 0.864131 | 1.516164e-64 | -8.615850e-47 |
| Msa0355080 | Msa0450890 | 0.815536 | 8.791215e-52 | -8.615850e-47 |
| Msa0355080 | Msa0456450 | 0.809527 | 1.810994e-50 | -8.615850e-47 |
| Msa0355080 | Msa0457070 | 0.812917 | 3.330027e-51 | -8.615850e-47 |
| Msa0355080 | Msa0476570 | 0.805399 | 1.360546e-49 | -8.615850e-47 |
| Msa0355080 | Msa0479760 | 0.809100 | 2.235682e-50 | -8.615850e-47 |
| Msa0355080 | Msa0480900 | 0.848811 | 4.831656e-60 | -8.615850e-47 |
| Msa0355080 | Msa0522540 | -0.869266 | 3.522658e-66 | -8.615850e-47 |
| Msa0355080 | Msa0523420 | 0.847857 | 8.865754e-60 | -8.615850e-47 |
| Msa0355080 | Msa0525180 | 0.816037 | 6.797990e-52 | -8.615850e-47 |
| Msa0355080 | Msa0526150 | -0.844083 | 9.415002e-59 | -8.615850e-47 |
| Msa0355080 | Msa0526500 | 0.831103 | 2.018049e-55 | -8.615850e-47 |
| Msa0355080 | Msa0526520 | 0.814649 | 1.383396e-51 | -8.615850e-47 |
| Msa0355080 | Msa0536970 | 0.817132 | 3.864776e-52 | -8.615850e-47 |
| Msa0355080 | Msa0541880 | -0.829617 | 4.657000e-55 | -8.615850e-47 |
| Msa0355080 | Msa0541940 | -0.829992 | 3.773163e-55 | -8.615850e-47 |
| Msa0355080 | Msa0548420 | -0.816249 | 6.096875e-52 | -8.615850e-47 |
| Msa0355080 | Msa0565370 | 0.815661 | 8.246463e-52 | -8.615850e-47 |
| Msa0355080 | Msa0565430 | 0.812012 | 5.251500e-51 | -8.615850e-47 |
| Msa0355080 | Msa0566280 | -0.806495 | 7.999982e-50 | -8.615850e-47 |
| Msa0355080 | Msa0566340 | -0.804734 | 1.873962e-49 | -8.615850e-47 |
| Msa0355080 | Msa0566940 | 0.839122 | 1.913983e-57 | -8.615850e-47 |
| Msa0355080 | Msa0567330 | -0.807422 | 5.093028e-50 | -8.615850e-47 |
| Msa0355080 | Msa0569580 | 0.809496 | 1.839090e-50 | -8.615850e-47 |
| Msa0355080 | Msa0575960 | 0.811740 | 6.018979e-51 | -8.615850e-47 |
| Msa0355080 | Msa0576480 | 0.819794 | 9.631289e-53 | -8.615850e-47 |
| Msa0355080 | Msa0578830 | -0.814386 | 1.581842e-51 | -8.615850e-47 |
| Msa0355080 | Msa0578930 | -0.815187 | 1.051410e-51 | -8.615850e-47 |
| Msa0355080 | Msa0579080 | -0.861336 | 1.102003e-63 | -8.615850e-47 |
| Msa0355080 | Msa0579160 | -0.876855 | 1.001606e-68 | -8.615850e-47 |
| Msa0355080 | Msa0579220 | -0.882598 | 9.106073e-71 | -8.615850e-47 |
| Msa0355080 | Msa0580410 | 0.813358 | 2.664763e-51 | -8.615850e-47 |
| Msa0355080 | Msa0581350 | -0.809385 | 1.941925e-50 | -8.615850e-47 |
| Msa0355080 | Msa0590620 | 0.874824 | 4.993929e-68 | -8.615850e-47 |
| Msa0355080 | Msa0603310 | -0.801132 | 1.039903e-48 | -8.615850e-47 |
| Msa0355080 | Msa0610240 | 0.826318 | 2.897085e-54 | -8.615850e-47 |
| Msa0355080 | Msa0610690 | -0.876762 | 1.078890e-68 | -8.615850e-47 |
| Msa0355080 | Msa0615070 | -0.803297 | 3.729332e-49 | -8.615850e-47 |
| Msa0355080 | Msa0616890 | 0.825652 | 4.171202e-54 | -8.615850e-47 |
| Msa0355080 | Msa0620900 | -0.809708 | 1.655298e-50 | -8.615850e-47 |
| Msa0355080 | Msa0626920 | -0.802496 | 5.456823e-49 | -8.615850e-47 |
| Msa0355080 | Msa0638300 | 0.810141 | 1.335657e-50 | -8.615850e-47 |
| Msa0355080 | Msa0644330 | -0.814118 | 1.813002e-51 | -8.615850e-47 |
| Msa0355080 | Msa0644340 | -0.804664 | 1.937716e-49 | -8.615850e-47 |
| Msa0355080 | Msa0651870 | -0.840442 | 8.675760e-58 | -8.615850e-47 |
| Msa0355080 | Msa0651890 | -0.839587 | 1.449777e-57 | -8.615850e-47 |
| Msa0355080 | Msa0657710 | -0.815995 | 6.947372e-52 | -8.615850e-47 |
| Msa0355080 | Msa0658520 | 0.812148 | 4.904870e-51 | -8.615850e-47 |
| Msa0355080 | Msa0671300 | 0.808299 | 3.315737e-50 | -8.615850e-47 |
| Msa0355080 | Msa0674480 | -0.812256 | 4.645103e-51 | -8.615850e-47 |
| Msa0355080 | Msa0676570 | 0.822593 | 2.180613e-53 | -8.615850e-47 |
| Msa0355080 | Msa0683200 | 0.816231 | 6.151735e-52 | -8.615850e-47 |
| Msa0355080 | Msa0685390 | 0.815948 | 7.116967e-52 | -8.615850e-47 |
| Msa0355080 | Msa0685610 | -0.828138 | 1.061913e-54 | -8.615850e-47 |
| Msa0355080 | Msa0701800 | 0.831605 | 1.518119e-55 | -8.615850e-47 |
| Msa0355080 | Msa0702800 | -0.818925 | 1.519564e-52 | -8.615850e-47 |
| Msa0355080 | Msa0703430 | 0.826303 | 2.921189e-54 | -8.615850e-47 |
| Msa0355080 | Msa0707860 | 0.829366 | 5.358969e-55 | -8.615850e-47 |
| Msa0355080 | Msa0711110 | 0.805024 | 1.629834e-49 | -8.615850e-47 |
| Msa0355080 | Msa0712860 | -0.828788 | 7.399425e-55 | -8.615850e-47 |
| Msa0355080 | Msa0719270 | -0.803405 | 3.541206e-49 | -8.615850e-47 |
| Msa0355080 | Msa0719750 | -0.810614 | 1.055835e-50 | -8.615850e-47 |
| Msa0355080 | Msa0726170 | 0.850379 | 1.764226e-60 | -8.615850e-47 |
| Msa0355080 | Msa0733240 | 0.815449 | 9.192494e-52 | -8.615850e-47 |
| Msa0355080 | Msa0741040 | -0.817294 | 3.553593e-52 | -8.615850e-47 |
| Msa0355080 | Msa0742370 | 0.904868 | 7.822722e-80 | -8.615850e-47 |
| Msa0355080 | Msa0745140 | -0.820807 | 5.643342e-53 | -8.615850e-47 |
| Msa0355080 | Msa0745630 | 0.801166 | 1.023793e-48 | -8.615850e-47 |
| Msa0355080 | Msa0752490 | 0.843274 | 1.549537e-58 | -8.615850e-47 |
| Msa0355080 | Msa0756670 | 0.832006 | 1.209161e-55 | -8.615850e-47 |
| Msa0355080 | Msa0758780 | 0.821311 | 4.320471e-53 | -8.615850e-47 |
| Msa0355080 | Msa0758810 | 0.825998 | 3.451861e-54 | -8.615850e-47 |
| Msa0355080 | Msa0758880 | 0.800071 | 1.711606e-48 | -8.615850e-47 |
| Msa0355080 | Msa0761310 | -0.811216 | 7.824020e-51 | -8.615850e-47 |
| Msa0355080 | Msa0765960 | 0.814412 | 1.560762e-51 | -8.615850e-47 |
| Msa0355080 | Msa0769910 | 0.827235 | 1.749863e-54 | -8.615850e-47 |
| Msa0355080 | Msa0770540 | 0.825360 | 4.890530e-54 | -8.615850e-47 |
| Msa0355080 | Msa0776640 | -0.822017 | 2.966963e-53 | -8.615850e-47 |
| Msa0355080 | Msa0779450 | 0.879719 | 9.902640e-70 | -8.615850e-47 |
| Msa0355080 | Msa0790650 | 0.827117 | 1.867878e-54 | -8.615850e-47 |
| Msa0355080 | Msa0792840 | 0.807872 | 4.088564e-50 | -8.615850e-47 |
| Msa0355080 | Msa0795750 | -0.829278 | 5.629682e-55 | -8.615850e-47 |
| Msa0355080 | Msa0795910 | 0.812945 | 3.283793e-51 | -8.615850e-47 |
| Msa0355080 | Msa0800120 | -0.813443 | 2.553390e-51 | -8.615850e-47 |
| Msa0355080 | Msa0800150 | -0.813079 | 3.069463e-51 | -8.615850e-47 |
| Msa0355080 | Msa0800480 | -0.836117 | 1.129361e-56 | -8.615850e-47 |
| Msa0355080 | Msa0801320 | 0.809069 | 2.269852e-50 | -8.615850e-47 |
| Msa0355080 | Msa0803780 | -0.805052 | 1.607745e-49 | -8.615850e-47 |
| Msa0355080 | Msa0805390 | -0.815959 | 7.075631e-52 | -8.615850e-47 |
| Msa0355080 | Msa0807100 | 0.800045 | 1.732872e-48 | -8.615850e-47 |
| Msa0355080 | Msa0807870 | 0.803600 | 3.226479e-49 | -8.615850e-47 |
| Msa0355080 | Msa0811690 | -0.817257 | 3.622132e-52 | -8.615850e-47 |
| Msa0355080 | Msa0812020 | 0.827303 | 1.685432e-54 | -8.615850e-47 |
| Msa0355080 | Msa0823480 | 0.895155 | 1.253342e-75 | -8.615850e-47 |
| Msa0355080 | Msa0825920 | -0.813830 | 2.098607e-51 | -8.615850e-47 |
| Msa0355080 | Msa0827340 | 0.833168 | 6.225406e-56 | -8.615850e-47 |
| Msa0355080 | Msa0828950 | -0.801330 | 9.472345e-49 | -8.615850e-47 |
| Msa0355080 | Msa0828960 | -0.818443 | 1.954660e-52 | -8.615850e-47 |
| Msa0355080 | Msa0833360 | 0.809654 | 1.700212e-50 | -8.615850e-47 |
| Msa0355080 | Msa0836060 | 0.814282 | 1.668346e-51 | -8.615850e-47 |
| Msa0355080 | Msa0838620 | 0.800718 | 1.263458e-48 | -8.615850e-47 |
| Msa0355080 | Msa0840520 | -0.802628 | 5.125686e-49 | -8.615850e-47 |
| Msa0355080 | Msa0844870 | 0.806664 | 7.369319e-50 | -8.615850e-47 |
| Msa0355080 | Msa0848670 | 0.817881 | 2.619879e-52 | -8.615850e-47 |
| Msa0355080 | Msa0851850 | -0.812412 | 4.295432e-51 | -8.615850e-47 |
| Msa0355080 | Msa0852090 | 0.801210 | 1.002766e-48 | -8.615850e-47 |
| Msa0355080 | Msa0862480 | 0.900969 | 4.301092e-78 | -8.615850e-47 |
| Msa0355080 | Msa0865420 | -0.829869 | 4.042564e-55 | -8.615850e-47 |
| Msa0355080 | Msa0866060 | 0.807055 | 6.093851e-50 | -8.615850e-47 |
| Msa0355080 | Msa0881880 | 0.807268 | 5.493096e-50 | -8.615850e-47 |
| Msa0355080 | Msa0882270 | 0.802148 | 6.437243e-49 | -8.615850e-47 |
| Msa0355080 | Msa0909260 | -0.818056 | 2.391675e-52 | -8.615850e-47 |
| Msa0355080 | Msa0919120 | 0.800387 | 1.475985e-48 | -8.615850e-47 |
| Msa0355080 | Msa0925630 | 0.815052 | 1.126156e-51 | -8.615850e-47 |
| Msa0355080 | Msa0940910 | -0.832413 | 9.590490e-56 | -8.615850e-47 |
| Msa0355080 | Msa0941150 | 0.802331 | 5.903302e-49 | -8.615850e-47 |
| Msa0355080 | Msa0958830 | -0.802203 | 6.271186e-49 | -8.615850e-47 |
| Msa0355080 | Msa0967070 | -0.833545 | 5.015012e-56 | -8.615850e-47 |
| Msa0355080 | Msa0973080 | 0.824110 | 9.637635e-54 | -8.615850e-47 |
| Msa0355080 | Msa1002970 | 0.831841 | 1.328083e-55 | -8.615850e-47 |
| Msa0355080 | Msa1004410 | 0.821988 | 3.012263e-53 | -8.615850e-47 |
| Msa0355080 | Msa1011140 | 0.803727 | 3.036216e-49 | -8.615850e-47 |
| Msa0355080 | Msa1014550 | 0.815003 | 1.155125e-51 | -8.615850e-47 |
| Msa0355080 | Msa1015360 | -0.819287 | 1.256983e-52 | -8.615850e-47 |
| Msa0355080 | Msa1017610 | 0.810622 | 1.051875e-50 | -8.615850e-47 |
| Msa0355080 | Msa1022420 | -0.819481 | 1.135304e-52 | -8.615850e-47 |
| Msa0355080 | Msa1032470 | -0.844270 | 8.390067e-59 | -8.615850e-47 |
| Msa0355080 | Msa1033430 | -0.851457 | 8.766856e-61 | -8.615850e-47 |
| Msa0355080 | Msa1038860 | -0.803476 | 3.423641e-49 | -8.615850e-47 |
| Msa0355080 | Msa1039440 | 0.908528 | 1.549265e-81 | -8.615850e-47 |
| Msa0355080 | Msa1041060 | -0.828193 | 1.030231e-54 | -8.615850e-47 |
| Msa0355080 | Msa1044250 | -0.836758 | 7.755676e-57 | -8.615850e-47 |
| Msa0355080 | Msa1055520 | 0.815029 | 1.139497e-51 | -8.615850e-47 |
| Msa0355080 | Msa1057620 | 0.808014 | 3.812505e-50 | -8.615850e-47 |
| Msa0355080 | Msa1072250 | -0.815044 | 1.130813e-51 | -8.615850e-47 |
| Msa0355080 | Msa1073050 | -0.849490 | 3.128076e-60 | -8.615850e-47 |
| Msa0355080 | Msa1078590 | 0.823802 | 1.138528e-53 | -8.615850e-47 |
| Msa0355080 | Msa1078760 | 0.831989 | 1.220475e-55 | -8.615850e-47 |
| Msa0355080 | Msa1082410 | -0.819338 | 1.224228e-52 | -8.615850e-47 |
| Msa0355080 | Msa1083620 | 0.833356 | 5.590058e-56 | -8.615850e-47 |
| Msa0355080 | Msa1085570 | 0.810889 | 9.210857e-51 | -8.615850e-47 |
| Msa0355080 | Msa1088400 | 0.857749 | 1.320111e-62 | -8.615850e-47 |
| Msa0355080 | Msa1088740 | 0.824648 | 7.202643e-54 | -8.615850e-47 |
| Msa0355080 | Msa1093190 | 0.811055 | 8.478997e-51 | -8.615850e-47 |
| Msa0355080 | Msa1094810 | -0.847769 | 9.380006e-60 | -8.615850e-47 |
| Msa0355080 | Msa1101610 | 0.831565 | 1.553230e-55 | -8.615850e-47 |
| Msa0355080 | Msa1102060 | 0.814648 | 1.384284e-51 | -8.615850e-47 |
| Msa0355080 | Msa1106730 | 0.806042 | 9.966978e-50 | -8.615850e-47 |
| Msa0355080 | Msa1114690 | -0.807668 | 4.517052e-50 | -8.615850e-47 |
| Msa0355080 | Msa1121720 | 0.800711 | 1.267951e-48 | -8.615850e-47 |
| Msa0355080 | Msa1128520 | 0.865931 | 4.128366e-65 | -8.615850e-47 |
| Msa0355080 | Msa1128610 | 0.845200 | 4.710466e-59 | -8.615850e-47 |
| Msa0355080 | Msa1129120 | 0.818104 | 2.332633e-52 | -8.615850e-47 |
| Msa0355080 | Msa1129880 | 0.821833 | 3.271619e-53 | -8.615850e-47 |
| Msa0355080 | Msa1132880 | 0.814559 | 1.448769e-51 | -8.615850e-47 |
| Msa0355080 | Msa1132900 | 0.831131 | 1.986671e-55 | -8.615850e-47 |
| Msa0355080 | Msa1133750 | -0.852376 | 4.806820e-61 | -8.615850e-47 |
| Msa0355080 | Msa1146980 | -0.823773 | 1.156460e-53 | -8.615850e-47 |
| Msa0355080 | Msa1147650 | -0.840170 | 1.021851e-57 | -8.615850e-47 |
| Msa0355080 | Msa1154060 | -0.805112 | 1.562529e-49 | -8.615850e-47 |
| Msa0355080 | Msa1154320 | -0.835399 | 1.716671e-56 | -8.615850e-47 |
| Msa0355080 | Msa1165460 | -0.828985 | 6.628202e-55 | -8.615850e-47 |
| Msa0355080 | Msa1169590 | 0.828544 | 8.477378e-55 | -8.615850e-47 |
| Msa0355080 | Msa1184680 | -0.802898 | 4.508816e-49 | -8.615850e-47 |
| Msa0355080 | Msa1190350 | 0.821297 | 4.352380e-53 | -8.615850e-47 |
| Msa0355080 | Msa1191530 | 0.809017 | 2.328931e-50 | -8.615850e-47 |
| Msa0355080 | Msa1196130 | -0.819811 | 9.546046e-53 | -8.615850e-47 |
| Msa0355080 | Msa1197720 | -0.866469 | 2.786639e-65 | -8.615850e-47 |
| Msa0355080 | Msa1199540 | 0.808542 | 2.942540e-50 | -8.615850e-47 |
| Msa0355080 | Msa1203650 | -0.818700 | 1.709420e-52 | -8.615850e-47 |
| Msa0355080 | Msa1204870 | 0.819061 | 1.415161e-52 | -8.615850e-47 |
| Msa0355080 | Msa1204900 | 0.833484 | 5.192523e-56 | -8.615850e-47 |
| Msa0355080 | Msa1205270 | 0.815900 | 7.294145e-52 | -8.615850e-47 |
| Msa0355080 | Msa1206510 | 0.803396 | 3.556535e-49 | -8.615850e-47 |
| Msa0355080 | Msa1207920 | 0.854286 | 1.362184e-61 | -8.615850e-47 |
| Msa0355080 | Msa1219530 | 0.811668 | 6.239351e-51 | -8.615850e-47 |
| Msa0355080 | Msa1221130 | -0.810914 | 9.092474e-51 | -8.615850e-47 |
| Msa0355080 | Msa1221270 | -0.819092 | 1.392505e-52 | -8.615850e-47 |
| Msa0355080 | Msa1231560 | -0.804946 | 1.691844e-49 | -8.615850e-47 |
| Msa0355080 | Msa1240190 | -0.837101 | 6.338685e-57 | -8.615850e-47 |
| Msa0355080 | Msa1240220 | -0.825499 | 4.533434e-54 | -8.615850e-47 |
| Msa0355080 | Msa1247200 | 0.800540 | 1.374146e-48 | -8.615850e-47 |
| Msa0355080 | Msa1251410 | -0.860111 | 2.594134e-63 | -8.615850e-47 |
| Msa0355080 | Msa1255030 | 0.803479 | 3.418224e-49 | -8.615850e-47 |
| Msa0355080 | Msa1255480 | 0.806629 | 7.496748e-50 | -8.615850e-47 |
| Msa0355080 | Msa1256490 | 0.825483 | 4.573547e-54 | -8.615850e-47 |
| Msa0355080 | Msa1260220 | -0.811685 | 6.188400e-51 | -8.615850e-47 |
| Msa0355080 | Msa1260520 | 0.808075 | 3.701192e-50 | -8.615850e-47 |
| Msa0355080 | Msa1266120 | 0.825673 | 4.122727e-54 | -8.615850e-47 |
| Msa0355080 | Msa1268360 | -0.815761 | 7.833124e-52 | -8.615850e-47 |
| Msa0355080 | Msa1268390 | -0.808367 | 3.207451e-50 | -8.615850e-47 |
| Msa0355080 | Msa1279200 | 0.804090 | 2.552142e-49 | -8.615850e-47 |
| Msa0355080 | Msa1283930 | -0.813917 | 2.008060e-51 | -8.615850e-47 |
| Msa0355080 | Msa1284020 | -0.804594 | 2.003795e-49 | -8.615850e-47 |
| Msa0355080 | Msa1287100 | 0.814826 | 1.264367e-51 | -8.615850e-47 |
| Msa0355080 | Msa1295210 | 0.823982 | 1.032897e-53 | -8.615850e-47 |
| Msa0355080 | Msa1295480 | 0.832968 | 6.982204e-56 | -8.615850e-47 |
| Msa0355080 | Msa1296810 | 0.831047 | 2.082283e-55 | -8.615850e-47 |
| Msa0355080 | Msa1298170 | 0.823639 | 1.242780e-53 | -8.615850e-47 |
| Msa0355080 | Msa1301280 | 0.831046 | 2.083766e-55 | -8.615850e-47 |
| Msa0355080 | Msa1322960 | -0.820815 | 5.619419e-53 | -8.615850e-47 |
| Msa0355080 | Msa1323070 | -0.844583 | 6.909241e-59 | -8.615850e-47 |
| Msa0355080 | Msa1326780 | 0.810525 | 1.104103e-50 | -8.615850e-47 |
| Msa0355080 | Msa1331570 | 0.869516 | 2.919786e-66 | -8.615850e-47 |
| Msa0355080 | Msa1333220 | 0.825551 | 4.406991e-54 | -8.615850e-47 |
| Msa0355080 | Msa1338810 | 0.817634 | 2.978420e-52 | -8.615850e-47 |
| Msa0355080 | Msa1342110 | 0.822732 | 2.023276e-53 | -8.615850e-47 |
| Msa0355080 | Msa1342360 | 0.808742 | 2.667405e-50 | -8.615850e-47 |
| Msa0355080 | Msa1342960 | 0.814293 | 1.658753e-51 | -8.615850e-47 |
| Msa0355080 | Msa1348170 | 0.812550 | 4.007666e-51 | -8.615850e-47 |
| Msa0355080 | Msa1349690 | -0.810178 | 1.311440e-50 | -8.615850e-47 |
| Msa0355080 | Msa1352580 | -0.826277 | 2.962693e-54 | -8.615850e-47 |
| Msa0355080 | Msa1352600 | 0.889491 | 2.309216e-73 | -8.615850e-47 |
| Msa0355080 | Msa1352630 | 0.808485 | 3.025660e-50 | -8.615850e-47 |
| Msa0355080 | Msa1356100 | 0.801625 | 8.242494e-49 | -8.615850e-47 |
| Msa0355080 | Msa1357070 | -0.830420 | 2.966287e-55 | -8.615850e-47 |
| Msa0355080 | Msa1358290 | -0.801077 | 1.067204e-48 | -8.615850e-47 |
| Msa0355080 | Msa1360070 | 0.843481 | 1.364799e-58 | -8.615850e-47 |
| Msa0355080 | Msa1361580 | 0.804663 | 1.938889e-49 | -8.615850e-47 |
| Msa0355080 | Msa1361670 | 0.851060 | 1.134647e-60 | -8.615850e-47 |
| Msa0355080 | Msa1363280 | 0.839011 | 2.044801e-57 | -8.615850e-47 |
| Msa0355080 | Msa1363310 | 0.816614 | 5.050123e-52 | -8.615850e-47 |
| Msa0355080 | Msa1364350 | 0.803298 | 3.727136e-49 | -8.615850e-47 |
| Msa0355080 | Msa1366140 | 0.844172 | 8.910954e-59 | -8.615850e-47 |
| Msa0355080 | Msa1381340 | 0.803105 | 4.085596e-49 | -8.615850e-47 |
| Msa0355080 | Msa1384700 | -0.826870 | 2.139836e-54 | -8.615850e-47 |
| Msa0355080 | Msa1386580 | 0.815604 | 8.490811e-52 | -8.615850e-47 |
| Msa0355080 | Msa1387450 | 0.847514 | 1.102408e-59 | -8.615850e-47 |
| Msa0355080 | Msa1388720 | 0.818190 | 2.230833e-52 | -8.615850e-47 |
| Msa0355080 | Msa1392740 | -0.812375 | 4.376705e-51 | -8.615850e-47 |
| Msa0355080 | Msa1396200 | 0.923013 | 4.641577e-89 | -8.615850e-47 |
| Msa0355080 | Msa1400290 | 0.849311 | 3.508452e-60 | -8.615850e-47 |
| Msa0355080 | Msa1401300 | -0.832524 | 8.999083e-56 | -8.615850e-47 |
| Msa0355080 | Msa1401910 | -0.814949 | 1.187219e-51 | -8.615850e-47 |
| Msa0355080 | Msa1403660 | -0.803148 | 4.002894e-49 | -8.615850e-47 |
| Msa0355080 | Msa1407160 | 0.808268 | 3.365917e-50 | -8.615850e-47 |
| Msa0355080 | Msa1408390 | -0.800693 | 1.278769e-48 | -8.615850e-47 |
| Msa0355080 | Msa1408860 | 0.800671 | 1.291972e-48 | -8.615850e-47 |
| Msa0355080 | Msa1409360 | 0.809742 | 1.627666e-50 | -8.615850e-47 |
| Msa0355080 | Msa1414780 | 0.827136 | 1.848531e-54 | -8.615850e-47 |
| Msa0355080 | Msa1422860 | -0.855898 | 4.631971e-62 | -8.615850e-47 |
| Msa0355080 | Msa1424250 | 0.816250 | 6.092197e-52 | -8.615850e-47 |
| Msa0355080 | Msa1428230 | 0.884893 | 1.299048e-71 | -8.615850e-47 |
| Msa0355080 | Msa1430460 | 0.801260 | 9.792424e-49 | -8.615850e-47 |
| Msa0355080 | Msa1431510 | 0.844830 | 5.929893e-59 | -8.615850e-47 |
| Msa0355080 | Msa1432730 | 0.806337 | 8.639121e-50 | -8.615850e-47 |
| Msa0355080 | Msa1433360 | -0.820441 | 6.848642e-53 | -8.615850e-47 |
| Msa0355080 | Msa1433570 | -0.813340 | 2.689881e-51 | -8.615850e-47 |
| Msa0355080 | Msa1434300 | -0.809193 | 2.135468e-50 | -8.615850e-47 |
| Msa0355080 | Msa1436620 | -0.802766 | 4.801980e-49 | -8.615850e-47 |
| Msa0355080 | Msa1439250 | -0.820001 | 8.636874e-53 | -8.615850e-47 |
| Msa0355080 | Msa1439930 | -0.800731 | 1.255769e-48 | -8.615850e-47 |
| Msa0355080 | Msa1445530 | -0.812172 | 4.845984e-51 | -8.615850e-47 |
| Msa0355080 | Msa1449270 | 0.804509 | 2.087788e-49 | -8.615850e-47 |
| Msa0355080 | Msa1451200 | 0.802328 | 5.910605e-49 | -8.615850e-47 |
| Msa0355080 | Msa1452230 | 0.844409 | 7.696898e-59 | -8.615850e-47 |
| Msa0355080 | Msa1457390 | 0.840432 | 8.728558e-58 | -8.615850e-47 |
| Msa0355080 | Msa1459130 | 0.837535 | 4.908994e-57 | -8.615850e-47 |
| Msa0355080 | Msa1462210 | 0.834415 | 3.036975e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0355080 | MtrunA17_Chr3g0091571 | 99.259 | 135 | 1 | 0 | 1 | 135 | 1 | 135 | 3.23e-91 | 273 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0355080 | AT1G18660.1 | 54.762 | 126 | 56 | 1 | 11 | 135 | 17 | 142 | 1.45e-37 | 134 |
| Msa0355080 | AT1G18660.2 | 54.762 | 126 | 56 | 1 | 11 | 135 | 17 | 142 | 1.45e-37 | 134 |
| Msa0355080 | AT1G18660.3 | 54.762 | 126 | 56 | 1 | 11 | 135 | 17 | 142 | 1.45e-37 | 134 |
| Msa0355080 | AT1G18660.4 | 54.762 | 126 | 56 | 1 | 11 | 135 | 17 | 142 | 1.74e-37 | 134 |
Find 52 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCACTAGATTTGATGTTAT+TGG | 0.166078 | 3_1:+28819221 | None:intergenic |
| GCTTGTACAAAAGGGAAATT+TGG | 0.299572 | 3_1:-28820349 | Msa0355080:CDS |
| GAAGGCTAATGCTCTTCTTC+TGG | 0.306462 | 3_1:-28818784 | Msa0355080:intron |
| GGTGATTCAAGAGAATAATA+AGG | 0.314897 | 3_1:-28818469 | Msa0355080:exon |
| ATGATCTATGCATTAAATAT+TGG | 0.333748 | 3_1:+28819023 | None:intergenic |
| ATCGAAGTGCAGCTTATATT+AGG | 0.345900 | 3_1:-28819182 | Msa0355080:intron |
| GTGATTCAAGAGAATAATAA+GGG | 0.365778 | 3_1:-28818468 | Msa0355080:exon |
| CTTCGATTGCCGAGGATGAT+TGG | 0.368141 | 3_1:+28819198 | None:intergenic |
| TTGGTTTGGTTGCAGGATAA+TGG | 0.370188 | 3_1:-28820414 | Msa0355080:intron |
| CGACGTCGACGACTACGTTT+TGG | 0.374689 | 3_1:-28822562 | Msa0355080:intron |
| GTGTCCCATGACAATCCTTC+TGG | 0.406472 | 3_1:+28820390 | None:intergenic |
| TAGAATGAAGAGAAGAAGGT+TGG | 0.409136 | 3_1:+28822699 | None:intergenic |
| ACCATTTCAGCTGGGTTTGA+AGG | 0.425497 | 3_1:-28818859 | Msa0355080:intron |
| GTTGGACATGGCCTGTGTTA+TGG | 0.425575 | 3_1:-28818490 | Msa0355080:CDS |
| TGTTTACGAGCTTGTACAAA+AGG | 0.436112 | 3_1:-28820358 | Msa0355080:CDS |
| ATTTCCCATTCTACCCTCAA+TGG | 0.443982 | 3_1:-28822610 | Msa0355080:exon |
| AGTGGCCATTGAGGGTAGAA+TGG | 0.466237 | 3_1:+28822605 | None:intergenic |
| GTCGTCGACGTCGAGAGAAT+CGG | 0.472876 | 3_1:+28822572 | None:intergenic |
| GCATTAGCCTTCAAAAGGTA+TGG | 0.481312 | 3_1:+28818795 | None:intergenic |
| GAAGAGCATTAGCCTTCAAA+AGG | 0.485021 | 3_1:+28818790 | None:intergenic |
| TTCCATTCTGTTGTCTCGAA+AGG | 0.487885 | 3_1:+28820326 | None:intergenic |
| TTATTAGAATGAAGAGAAGA+AGG | 0.495033 | 3_1:+28822695 | None:intergenic |
| GAAGAGAAGAAGGTTGGAAA+AGG | 0.501800 | 3_1:+28822705 | None:intergenic |
| ACATACTTCGGCAAGTGTTG+TGG | 0.508681 | 3_1:+28818961 | None:intergenic |
| CATACTTCGGCAAGTGTTGT+GGG | 0.526024 | 3_1:+28818962 | None:intergenic |
| GGAGGTTGAGTGGCCATTGA+GGG | 0.527230 | 3_1:+28822597 | None:intergenic |
| GTTTACGAGCTTGTACAAAA+GGG | 0.530579 | 3_1:-28820357 | Msa0355080:CDS |
| AAGAGAATAATAAGGGGAAG+TGG | 0.533086 | 3_1:-28818461 | Msa0355080:exon |
| GTGGCCATTGAGGGTAGAAT+GGG | 0.539239 | 3_1:+28822606 | None:intergenic |
| GAAGGATGCTGCAAAGCTTG+TGG | 0.558715 | 3_1:-28818841 | Msa0355080:CDS |
| GTGGGATCAAGCCCACTCAA+TGG | 0.562899 | 3_1:+28818980 | None:intergenic |
| CATCATCATCCTCAGAACAT+AGG | 0.564721 | 3_1:-28819003 | Msa0355080:CDS |
| TCTTGAATGTAGGGCAAGTG+TGG | 0.566176 | 3_1:-28818514 | Msa0355080:intron |
| TCGAGACAACAGAATGGAAG+AGG | 0.566392 | 3_1:-28820322 | Msa0355080:intron |
| GGCAAGTGTGGAGTTGGACA+TGG | 0.568820 | 3_1:-28818502 | Msa0355080:CDS |
| TGTGTGTGAAGAGAAGATTA+AGG | 0.570548 | 3_1:+28822666 | None:intergenic |
| ATGTAGGGCAAGTGTGGAGT+TGG | 0.573331 | 3_1:-28818508 | Msa0355080:intron |
| AGGAGGTTGAGTGGCCATTG+AGG | 0.577583 | 3_1:+28822596 | None:intergenic |
| ATGGACCAGAAGGATTGTCA+TGG | 0.596967 | 3_1:-28820395 | Msa0355080:CDS |
| TTGCAGGATAATGGACCAGA+AGG | 0.597081 | 3_1:-28820405 | Msa0355080:intron |
| GGCCTTTCGAGACAACAGAA+TGG | 0.602857 | 3_1:-28820328 | Msa0355080:CDS |
| AGAATCGGAAGGAGGTTGAG+TGG | 0.612077 | 3_1:+28822587 | None:intergenic |
| TCTAGTGATCCAATCATCCT+CGG | 0.612986 | 3_1:-28819207 | Msa0355080:CDS |
| TGGACCAGAAGGATTGTCAT+GGG | 0.629901 | 3_1:-28820394 | Msa0355080:CDS |
| ACTCAATGGCCTATGTTCTG+AGG | 0.635518 | 3_1:+28818994 | None:intergenic |
| TCAGAACATAGGCCATTGAG+TGG | 0.644909 | 3_1:-28818992 | Msa0355080:CDS |
| CTCTTGAATCACCATAACAC+AGG | 0.646189 | 3_1:+28818479 | None:intergenic |
| ACGTCGAGAGAATCGGAAGG+AGG | 0.657020 | 3_1:+28822579 | None:intergenic |
| TCGACGTCGAGAGAATCGGA+AGG | 0.674517 | 3_1:+28822576 | None:intergenic |
| CAGAACATAGGCCATTGAGT+GGG | 0.678923 | 3_1:-28818991 | Msa0355080:CDS |
| AAGCTGCACTTCGATTGCCG+AGG | 0.702323 | 3_1:+28819190 | None:intergenic |
| TGATTCAAGAGAATAATAAG+GGG | 0.712978 | 3_1:-28818467 | Msa0355080:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAGAAAATATTCTTTTTTT+AGG | + | chr3_1:28819523-28819542 | None:intergenic | 10.0% |
| !!! | ATTAATACTAACATTTTAAT+CGG | + | chr3_1:28821002-28821021 | None:intergenic | 10.0% |
| !!! | TCAATATTTTTCTTTTAAAT+TGG | - | chr3_1:28821963-28821982 | Msa0355080:intron | 10.0% |
| !! | TTATTCAATGAATCTAAAAA+AGG | + | chr3_1:28819449-28819468 | None:intergenic | 15.0% |
| !! | ATAAAACAAATAAACATTCT+TGG | - | chr3_1:28820665-28820684 | Msa0355080:intron | 15.0% |
| !! | TTAAAATGTTAGTATTAATC+CGG | - | chr3_1:28821003-28821022 | Msa0355080:intron | 15.0% |
| !!! | AATTTTATAAAGAGATATCA+AGG | - | chr3_1:28821767-28821786 | Msa0355080:intron | 15.0% |
| !!! | TTTCTAAAACAAAAATATCA+GGG | + | chr3_1:28822408-28822427 | None:intergenic | 15.0% |
| !!! | TTTTCTAAAACAAAAATATC+AGG | + | chr3_1:28822409-28822428 | None:intergenic | 15.0% |
| !!! | AAATTTGTTTTTTTCTTACT+AGG | - | chr3_1:28822426-28822445 | Msa0355080:intron | 15.0% |
| !!! | AGAAGTATTTAATTGATTCT+AGG | - | chr3_1:28819254-28819273 | Msa0355080:intron | 20.0% |
| !!! | TATTTTCTTATATTTGAGAC+CGG | + | chr3_1:28819533-28819552 | None:intergenic | 20.0% |
| !!! | TATTTTCTTATATTTGAGAC+CGG | - | chr3_1:28819533-28819552 | Msa0355080:intron | 20.0% |
| !! | ACAAAAAAAAGAGAGAAAAA+AGG | + | chr3_1:28819660-28819679 | None:intergenic | 20.0% |
| !! | AATTTGTGATTCAATAACAT+TGG | - | chr3_1:28820449-28820468 | Msa0355080:intron | 20.0% |
| !!! | AAAATAGTGTGCTTTATTTT+TGG | - | chr3_1:28820818-28820837 | Msa0355080:intron | 20.0% |
| !! | AAAAGAATAAAAAATGTTGC+TGG | + | chr3_1:28820901-28820920 | None:intergenic | 20.0% |
| !! | AGATTCATTAACTTATGAAA+TGG | - | chr3_1:28821153-28821172 | Msa0355080:intron | 20.0% |
| !!! | TAGCTTTATGTCAAAAATTT+GGG | - | chr3_1:28821200-28821219 | Msa0355080:intron | 20.0% |
| !!! | CAGTATTTTTTTGCTATAAT+TGG | - | chr3_1:28821452-28821471 | Msa0355080:intron | 20.0% |
| !! | AACTATATATGTAATGCTTA+TGG | + | chr3_1:28821550-28821569 | None:intergenic | 20.0% |
| !! | CTTTATAAAATTCTACAAGT+AGG | + | chr3_1:28821759-28821778 | None:intergenic | 20.0% |
| !! | ATGATCTATGCATTAAATAT+TGG | + | chr3_1:28822092-28822111 | None:intergenic | 20.0% |
| !!! | TTCTAAAACAAAAATATCAG+GGG | + | chr3_1:28822407-28822426 | None:intergenic | 20.0% |
| ! | TTATTAGAATGAAGAGAAGA+AGG | + | chr3_1:28818420-28818439 | None:intergenic | 25.0% |
| !!! | AAAAAACTATCACGGTTTTT+TGG | - | chr3_1:28818641-28818660 | Msa0355080:intron | 25.0% |
| ! | AACCAAGTATATGTTTGAAT+TGG | + | chr3_1:28818785-28818804 | None:intergenic | 25.0% |
| !!! | AACATATACTTGGTTTTGTT+TGG | - | chr3_1:28818790-28818809 | Msa0355080:CDS | 25.0% |
| !! | ATAACTTTTGTGAAACTACT+TGG | + | chr3_1:28818992-28819011 | None:intergenic | 25.0% |
| !! | TTTTCACAATAATAAGGACA+TGG | + | chr3_1:28819015-28819034 | None:intergenic | 25.0% |
| !! | CGCAATTTTTCACAATAATA+AGG | + | chr3_1:28819021-28819040 | None:intergenic | 25.0% |
| ! | TGAAAAATTGCGTTTGAAAA+AGG | - | chr3_1:28819029-28819048 | Msa0355080:CDS | 25.0% |
| !!! | CAGGTTTTGGTTAAAAAAAA+AGG | + | chr3_1:28819103-28819122 | None:intergenic | 25.0% |
| ! | TTGCTTATTAAATGCATGTT+TGG | - | chr3_1:28819136-28819155 | Msa0355080:intron | 25.0% |
| ! | TCACTTATGTTAAAATCCTT+TGG | + | chr3_1:28819230-28819249 | None:intergenic | 25.0% |
| ! | CGTGTTAAACAATCAATTTA+AGG | + | chr3_1:28819291-28819310 | None:intergenic | 25.0% |
| ! | CACGTAAATATGTGTTTAAA+CGG | - | chr3_1:28819307-28819326 | Msa0355080:intron | 25.0% |
| ! | ACGTAAATATGTGTTTAAAC+GGG | - | chr3_1:28819308-28819327 | Msa0355080:intron | 25.0% |
| !!! | TTCTCTCTTTTTTTTGTGTA+TGG | - | chr3_1:28819663-28819682 | Msa0355080:intron | 25.0% |
| ! | TATGGTTTCAAAGTTGAATA+TGG | - | chr3_1:28819681-28819700 | Msa0355080:intron | 25.0% |
| ! | ATGGTTTCAAAGTTGAATAT+GGG | - | chr3_1:28819682-28819701 | Msa0355080:intron | 25.0% |
| ! | TAAAAGTCAAAGGGATATTA+AGG | + | chr3_1:28819729-28819748 | None:intergenic | 25.0% |
| ! | CCTAACAATTAAAAGTCAAA+GGG | + | chr3_1:28819738-28819757 | None:intergenic | 25.0% |
| ! | ACCTAACAATTAAAAGTCAA+AGG | + | chr3_1:28819739-28819758 | None:intergenic | 25.0% |
| !!! | GTTAGTTTGTAAAAGTATGT+AGG | - | chr3_1:28819883-28819902 | Msa0355080:intron | 25.0% |
| ! | TTTCTTACTGTCATTGTAAA+TGG | - | chr3_1:28819906-28819925 | Msa0355080:intron | 25.0% |
| ! | TAACTAAACATGTATCATGT+CGG | + | chr3_1:28820165-28820184 | None:intergenic | 25.0% |
| ! | GAAGCAAAGCTATTTATATT+TGG | + | chr3_1:28820320-28820339 | None:intergenic | 25.0% |
| ! | ACTCAAACAATTAAAAGAGA+AGG | + | chr3_1:28820554-28820573 | None:intergenic | 25.0% |
| ! | TATTCTGTTAATTGTTCTTC+TGG | - | chr3_1:28820842-28820861 | Msa0355080:intron | 25.0% |
| ! | ATTCTGTTAATTGTTCTTCT+GGG | - | chr3_1:28820843-28820862 | Msa0355080:intron | 25.0% |
| !! | TGTTTTCATCATGATGTATT+GGG | + | chr3_1:28821045-28821064 | None:intergenic | 25.0% |
| !! | ATGTTTTCATCATGATGTAT+TGG | + | chr3_1:28821046-28821065 | None:intergenic | 25.0% |
| ! | AAACATAAACGAACAGATTA+TGG | - | chr3_1:28821060-28821079 | Msa0355080:intron | 25.0% |
| ! | ACATAAATGAACAGATTATG+AGG | - | chr3_1:28821085-28821104 | Msa0355080:intron | 25.0% |
| ! | ATTAACTTATGAAATGGAAG+TGG | - | chr3_1:28821159-28821178 | Msa0355080:intron | 25.0% |
| ! | TTAACTTATGAAATGGAAGT+GGG | - | chr3_1:28821160-28821179 | Msa0355080:intron | 25.0% |
| !!! | GTAGCTTTATGTCAAAAATT+TGG | - | chr3_1:28821199-28821218 | Msa0355080:intron | 25.0% |
| ! | TATGTCAAAAATTTGGGAAA+AGG | - | chr3_1:28821206-28821225 | Msa0355080:intron | 25.0% |
| ! | ATGTCAAAAATTTGGGAAAA+GGG | - | chr3_1:28821207-28821226 | Msa0355080:intron | 25.0% |
| ! | TTAAATAAATGCATGGGTAA+AGG | + | chr3_1:28821298-28821317 | None:intergenic | 25.0% |
| ! | GGATGATTAAATAAATGCAT+GGG | + | chr3_1:28821304-28821323 | None:intergenic | 25.0% |
| ! | AGGATGATTAAATAAATGCA+TGG | + | chr3_1:28821305-28821324 | None:intergenic | 25.0% |
| ! | AAACGCATTCTATATAATAC+TGG | + | chr3_1:28821383-28821402 | None:intergenic | 25.0% |
| !!! | TCTGTTCACTTTTTTTTTTG+TGG | - | chr3_1:28821642-28821661 | Msa0355080:intron | 25.0% |
| !! | TGAAAAACACTTCTCAATTT+TGG | - | chr3_1:28821703-28821722 | Msa0355080:intron | 25.0% |
| ! | ATCTTTGCGATTATTTATTC+AGG | - | chr3_1:28821847-28821866 | Msa0355080:intron | 25.0% |
| ! | ATCACTAGATTTGATGTTAT+TGG | + | chr3_1:28821894-28821913 | None:intergenic | 25.0% |
| ! | TGATTGGAAAATGTTATCAT+TGG | + | chr3_1:28822062-28822081 | None:intergenic | 25.0% |
| !! | AATGATAACATTTTCCAATC+AGG | - | chr3_1:28822061-28822080 | Msa0355080:intron | 25.0% |
| !!! | TTTGTTTTTTTCTTACTAGG+TGG | - | chr3_1:28822429-28822448 | Msa0355080:intron | 25.0% |
| !!! | TTGTTTTTTTCTTACTAGGT+GGG | - | chr3_1:28822430-28822449 | Msa0355080:intron | 25.0% |
| !! | CAAATGCTTTTCTCTTTTAA+AGG | - | chr3_1:28822480-28822499 | Msa0355080:intron | 25.0% |
| ! | GTGATTCAAGAGAATAATAA+GGG | - | chr3_1:28822644-28822663 | Msa0355080:five_prime_UTR | 25.0% |
| ! | TGATTCAAGAGAATAATAAG+GGG | - | chr3_1:28822645-28822664 | Msa0355080:five_prime_UTR | 25.0% |
| !!! | TTTTTTGCGTCACATTTTCT+CGG | + | chr3_1:28818627-28818646 | None:intergenic | 30.0% |
| !!! | GTTTACAGTGTTTTTTGAAG+CGG | - | chr3_1:28818704-28818723 | Msa0355080:intron | 30.0% |
| AGCCAATTCAAACATATACT+TGG | - | chr3_1:28818780-28818799 | Msa0355080:intron | 30.0% | |
| TAGAACAACTTGTGAAAATG+AGG | - | chr3_1:28818917-28818936 | Msa0355080:intron | 30.0% | |
| !! | TTGATTTTGACACGTTTGAT+TGG | - | chr3_1:28819200-28819219 | Msa0355080:CDS | 30.0% |
| CATTGAGTAGTTAATGTATC+TGG | + | chr3_1:28819498-28819517 | None:intergenic | 30.0% | |
| !! | CCCTTTGACTTTTAATTGTT+AGG | - | chr3_1:28819735-28819754 | Msa0355080:intron | 30.0% |
| ! | TTGAATGCAATCACATGTTT+TGG | + | chr3_1:28820020-28820039 | None:intergenic | 30.0% |
| TTGACTTTGTAAACATCACT+TGG | + | chr3_1:28820362-28820381 | None:intergenic | 30.0% | |
| !! | ATGTTTTATTGAGTGAGCAT+AGG | + | chr3_1:28820424-28820443 | None:intergenic | 30.0% |
| CTATCTACACTTTGTTACTA+CGG | + | chr3_1:28820519-28820538 | None:intergenic | 30.0% | |
| AACAAAGTGTAGATAGTGAA+AGG | - | chr3_1:28820523-28820542 | Msa0355080:intron | 30.0% | |
| TTGAGTGCTTCAAACATAAT+GGG | + | chr3_1:28820628-28820647 | None:intergenic | 30.0% | |
| TTTGAGTGCTTCAAACATAA+TGG | + | chr3_1:28820629-28820648 | None:intergenic | 30.0% | |
| TCTCTACGCAAAATGTATTA+TGG | - | chr3_1:28820922-28820941 | Msa0355080:intron | 30.0% | |
| CTCTACGCAAAATGTATTAT+GGG | - | chr3_1:28820923-28820942 | Msa0355080:intron | 30.0% | |
| AATCATCCTATGCAAAATAC+AGG | - | chr3_1:28821316-28821335 | Msa0355080:intron | 30.0% | |
| ! | TAAAGACCTGTATTTTGCAT+AGG | + | chr3_1:28821325-28821344 | None:intergenic | 30.0% |
| ! | TTGATTCACATGTCTTTTCT+TGG | - | chr3_1:28821490-28821509 | Msa0355080:intron | 30.0% |
| TTGATGGAAGCTAAATGAAT+TGG | - | chr3_1:28821518-28821537 | Msa0355080:intron | 30.0% | |
| AGGAATTATTCCATACATAC+AGG | - | chr3_1:28821787-28821806 | Msa0355080:intron | 30.0% | |
| GGAATTATTCCATACATACA+GGG | - | chr3_1:28821788-28821807 | Msa0355080:intron | 30.0% | |
| GAATTATTCCATACATACAG+GGG | - | chr3_1:28821789-28821808 | Msa0355080:intron | 30.0% | |
| ATAATCGCAAAGATCAACAT+TGG | + | chr3_1:28821841-28821860 | None:intergenic | 30.0% | |
| ! | AGATCTGAAGCAAAACTATT+TGG | + | chr3_1:28822018-28822037 | None:intergenic | 30.0% |
| ! | AAATATTGGCTAATCCTGAT+TGG | + | chr3_1:28822078-28822097 | None:intergenic | 30.0% |
| TGATCCAATAGAACATACTT+CGG | + | chr3_1:28822166-28822185 | None:intergenic | 30.0% | |
| ! | AGTAAAACCATACCTTTTGA+AGG | - | chr3_1:28822310-28822329 | Msa0355080:intron | 30.0% |
| ! | TGATCTCTTTGGTAGTTTAT+AGG | - | chr3_1:28822377-28822396 | Msa0355080:intron | 30.0% |
| ! | GATCTCTTTGGTAGTTTATA+GGG | - | chr3_1:28822378-28822397 | Msa0355080:intron | 30.0% |
| !!! | TGTTTTTTTCTTACTAGGTG+GGG | - | chr3_1:28822431-28822450 | Msa0355080:intron | 30.0% |
| ! | ATTTGAAACACCTAGCTAAA+TGG | + | chr3_1:28822465-28822484 | None:intergenic | 30.0% |
| GGTGATTCAAGAGAATAATA+AGG | - | chr3_1:28822643-28822662 | Msa0355080:five_prime_UTR | 30.0% | |
| TAGAATGAAGAGAAGAAGGT+TGG | + | chr3_1:28818416-28818435 | None:intergenic | 35.0% | |
| TGTGTGTGAAGAGAAGATTA+AGG | + | chr3_1:28818449-28818468 | None:intergenic | 35.0% | |
| TGTGACGCAAAAAACTATCA+CGG | - | chr3_1:28818633-28818652 | Msa0355080:intron | 35.0% | |
| ! | AAAACTAAACACGCAGGTTT+TGG | + | chr3_1:28819116-28819135 | None:intergenic | 35.0% |
| AAGCAAAAAACTAAACACGC+AGG | + | chr3_1:28819122-28819141 | None:intergenic | 35.0% | |
| !!! | ACGTTTGATTGGTTTTCCAA+AGG | - | chr3_1:28819211-28819230 | Msa0355080:CDS | 35.0% |
| ! | TTCTTATATTTGAGACCGGA+GGG | + | chr3_1:28819537-28819556 | None:intergenic | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | + | chr3_1:28819536-28819555 | None:intergenic | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | - | chr3_1:28819536-28819555 | Msa0355080:intron | 35.0% |
| ! | TTCTTATATTTGAGACCGGA+GGG | - | chr3_1:28819537-28819556 | Msa0355080:intron | 35.0% |
| TAATAACCATATACTCCCTC+CGG | + | chr3_1:28819555-28819574 | None:intergenic | 35.0% | |
| AGGGATATTAAGGTAACAAG+AGG | + | chr3_1:28819719-28819738 | None:intergenic | 35.0% | |
| !!! | AGACTGTCATTTTCTCTTCT+TGG | + | chr3_1:28819769-28819788 | None:intergenic | 35.0% |
| ! | TTTTTCTGTATCATGAGCTG+TGG | - | chr3_1:28819839-28819858 | Msa0355080:intron | 35.0% |
| !!! | ATCATGAGCTGTGGTTTTTT+TGG | - | chr3_1:28819848-28819867 | Msa0355080:intron | 35.0% |
| !!! | TCATGAGCTGTGGTTTTTTT+GGG | - | chr3_1:28819849-28819868 | Msa0355080:intron | 35.0% |
| TAAACATGTATCATGTCGGA+AGG | + | chr3_1:28820161-28820180 | None:intergenic | 35.0% | |
| ! | AAATCTTGTATGACTAGCTG+TGG | - | chr3_1:28820212-28820231 | Msa0355080:intron | 35.0% |
| TAGCTGTGGTGAAAATCTAA+TGG | - | chr3_1:28820226-28820245 | Msa0355080:intron | 35.0% | |
| AGAAAAATAACCAGACATCG+AGG | + | chr3_1:28820486-28820505 | None:intergenic | 35.0% | |
| TTACTAAATGCTCACAGTTC+TGG | + | chr3_1:28820577-28820596 | None:intergenic | 35.0% | |
| CTGTGAGCATTTAGTAATAC+AGG | - | chr3_1:28820580-28820599 | Msa0355080:intron | 35.0% | |
| ! | GTTTGAAGCACTCAAATGAA+TGG | - | chr3_1:28820633-28820652 | Msa0355080:intron | 35.0% |
| ! | CATTCTTGGAGTCTAAGATT+TGG | - | chr3_1:28820679-28820698 | Msa0355080:intron | 35.0% |
| ! | TTGGAGTCTAAGATTTGGTT+TGG | - | chr3_1:28820684-28820703 | Msa0355080:intron | 35.0% |
| TGTTTACGAGCTTGTACAAA+AGG | - | chr3_1:28820754-28820773 | Msa0355080:intron | 35.0% | |
| GTTTACGAGCTTGTACAAAA+GGG | - | chr3_1:28820755-28820774 | Msa0355080:intron | 35.0% | |
| GCTTGTACAAAAGGGAAATT+TGG | - | chr3_1:28820763-28820782 | Msa0355080:intron | 35.0% | |
| TTTCATCATGATGTATTGGG+AGG | + | chr3_1:28821042-28821061 | None:intergenic | 35.0% | |
| AATACTGGATAGACGTAACA+GGG | + | chr3_1:28821368-28821387 | None:intergenic | 35.0% | |
| TAATACTGGATAGACGTAAC+AGG | + | chr3_1:28821369-28821388 | None:intergenic | 35.0% | |
| ! | TCTTTTCTTGGTCTGTTTGA+TGG | - | chr3_1:28821502-28821521 | Msa0355080:intron | 35.0% |
| GAAGCTAAATGAATTGGTGT+TGG | - | chr3_1:28821524-28821543 | Msa0355080:intron | 35.0% | |
| ! | ACACTTCTCAATTTTGGATG+AGG | - | chr3_1:28821709-28821728 | Msa0355080:intron | 35.0% |
| ! | CACTTCTCAATTTTGGATGA+GGG | - | chr3_1:28821710-28821729 | Msa0355080:intron | 35.0% |
| TCAAATTTCCCCTGTATGTA+TGG | + | chr3_1:28821800-28821819 | None:intergenic | 35.0% | |
| ATCGAAGTGCAGCTTATATT+AGG | - | chr3_1:28821930-28821949 | Msa0355080:intron | 35.0% | |
| AGTGCAGCTTATATTAGGTT+AGG | - | chr3_1:28821935-28821954 | Msa0355080:intron | 35.0% | |
| !! | ATGGTTTTACTGAACTGCTT+TGG | + | chr3_1:28822301-28822320 | None:intergenic | 35.0% |
| TAATGCTCTTCTTCTGGTAA+GGG | - | chr3_1:28822334-28822353 | Msa0355080:intron | 35.0% | |
| TTGTTCTCACTTGATCTCTT+TGG | - | chr3_1:28822366-28822385 | Msa0355080:intron | 35.0% | |
| !!! | GTTTTTTTCTTACTAGGTGG+GGG | - | chr3_1:28822432-28822451 | Msa0355080:intron | 35.0% |
| ATGAAATAGGTACAGACACA+AGG | + | chr3_1:28822571-28822590 | None:intergenic | 35.0% | |
| TTGTGTCTGTACCTATTTCA+TGG | - | chr3_1:28822570-28822589 | Msa0355080:CDS | 35.0% | |
| TGTGTCTGTACCTATTTCAT+GGG | - | chr3_1:28822571-28822590 | Msa0355080:CDS | 35.0% | |
| AAGAGAATAATAAGGGGAAG+TGG | - | chr3_1:28822651-28822670 | Msa0355080:five_prime_UTR | 35.0% | |
| GAAGAGAAGAAGGTTGGAAA+AGG | + | chr3_1:28818410-28818429 | None:intergenic | 40.0% | |
| ATTTCCCATTCTACCCTCAA+TGG | - | chr3_1:28818502-28818521 | Msa0355080:CDS | 40.0% | |
| !!! | ACTATCACGGTTTTTTGGAC+TGG | - | chr3_1:28818646-28818665 | Msa0355080:intron | 40.0% |
| CGCATTTGTTTCCACAATTG+CGG | - | chr3_1:28819070-28819089 | Msa0355080:intron | 40.0% | |
| TCGAGTGACATAAGTGATTC+TGG | - | chr3_1:28819167-28819186 | Msa0355080:intron | 40.0% | |
| GTATTCTATAACGCGTTGAG+TGG | + | chr3_1:28819396-28819415 | None:intergenic | 40.0% | |
| TAAATGGCTTAGTGTCTGTG+CGG | - | chr3_1:28819922-28819941 | Msa0355080:intron | 40.0% | |
| ! | CTTCTGATAGAAGGTGTGTA+TGG | - | chr3_1:28819963-28819982 | Msa0355080:intron | 40.0% |
| ! | TGCTTCAAACATAATGGGAC+AGG | + | chr3_1:28820623-28820642 | None:intergenic | 40.0% |
| !! | CTAAGATTTGGTTTGGTTGC+AGG | - | chr3_1:28820691-28820710 | Msa0355080:intron | 40.0% |
| !! | TTGGTTTGGTTGCAGGATAA+TGG | - | chr3_1:28820698-28820717 | Msa0355080:intron | 40.0% |
| TTCCATTCTGTTGTCTCGAA+AGG | + | chr3_1:28820789-28820808 | None:intergenic | 40.0% | |
| AATACACTTGACTGCATCCA+CGG | + | chr3_1:28821257-28821276 | None:intergenic | 40.0% | |
| ! | TCTCAATTTTGGATGAGGGA+TGG | - | chr3_1:28821714-28821733 | Msa0355080:intron | 40.0% |
| TCTAGTGATCCAATCATCCT+CGG | - | chr3_1:28821905-28821924 | Msa0355080:intron | 40.0% | |
| CATCATCATCCTCAGAACAT+AGG | - | chr3_1:28822109-28822128 | Msa0355080:intron | 40.0% | |
| CTTGCCGAAGTATGTTCTAT+TGG | - | chr3_1:28822159-28822178 | Msa0355080:intron | 40.0% | |
| TTCTTGACAACCATTTCAGC+TGG | - | chr3_1:28822244-28822263 | Msa0355080:intron | 40.0% | |
| TCTTGACAACCATTTCAGCT+GGG | - | chr3_1:28822245-28822264 | Msa0355080:intron | 40.0% | |
| !! | GCATTAGCCTTCAAAAGGTA+TGG | + | chr3_1:28822320-28822339 | None:intergenic | 40.0% |
| !! | GAAGAGCATTAGCCTTCAAA+AGG | + | chr3_1:28822325-28822344 | None:intergenic | 40.0% |
| CTAATGCTCTTCTTCTGGTA+AGG | - | chr3_1:28822333-28822352 | Msa0355080:intron | 40.0% | |
| ! | GGGTTGATTTCCATTTAGCT+AGG | - | chr3_1:28822452-28822471 | Msa0355080:intron | 40.0% |
| AATAGGTACAGACACAAGGT+GGG | + | chr3_1:28822567-28822586 | None:intergenic | 40.0% | |
| AAATAGGTACAGACACAAGG+TGG | + | chr3_1:28822568-28822587 | None:intergenic | 40.0% | |
| GTGTCTGTACCTATTTCATG+GGG | - | chr3_1:28822572-28822591 | Msa0355080:CDS | 40.0% | |
| TCAAGAGTTCCCCATGAAAT+AGG | + | chr3_1:28822584-28822603 | None:intergenic | 40.0% | |
| ATGGGGAACTCTTGAATGTA+GGG | - | chr3_1:28822589-28822608 | Msa0355080:CDS | 40.0% | |
| CTCTTGAATCACCATAACAC+AGG | + | chr3_1:28822636-28822655 | None:intergenic | 40.0% | |
| AAGGACAACAACCGCAATTG+TGG | + | chr3_1:28819084-28819103 | None:intergenic | 45.0% | |
| GCGTTATAGAATACTCCCTC+CGG | - | chr3_1:28819402-28819421 | Msa0355080:intron | 45.0% | |
| ! | GCACTGACACTTCTGATAGA+AGG | - | chr3_1:28819954-28819973 | Msa0355080:intron | 45.0% |
| !!! | CACATGTTTTGGTGTCGTGT+CGG | + | chr3_1:28820009-28820028 | None:intergenic | 45.0% |
| TGTCCGTATCTGTGCTTCAT+AGG | - | chr3_1:28820095-28820114 | Msa0355080:intron | 45.0% | |
| GGACCTATGAAGCACAGATA+CGG | + | chr3_1:28820101-28820120 | None:intergenic | 45.0% | |
| GTATCTGTGCTTCATAGGTC+CGG | - | chr3_1:28820100-28820119 | Msa0355080:intron | 45.0% | |
| ACATGTATCATGTCGGAAGG+AGG | + | chr3_1:28820158-28820177 | None:intergenic | 45.0% | |
| !! | TTGCAGGATAATGGACCAGA+AGG | - | chr3_1:28820707-28820726 | Msa0355080:intron | 45.0% |
| ATGGACCAGAAGGATTGTCA+TGG | - | chr3_1:28820717-28820736 | Msa0355080:intron | 45.0% | |
| TGGACCAGAAGGATTGTCAT+GGG | - | chr3_1:28820718-28820737 | Msa0355080:intron | 45.0% | |
| TCGAGACAACAGAATGGAAG+AGG | - | chr3_1:28820790-28820809 | Msa0355080:intron | 45.0% | |
| GGGAGGATACATGATTACTC+CGG | + | chr3_1:28821025-28821044 | None:intergenic | 45.0% | |
| GTGGATGCAGTCAAGTGTAT+TGG | - | chr3_1:28821256-28821275 | Msa0355080:intron | 45.0% | |
| ACTCAATGGCCTATGTTCTG+AGG | + | chr3_1:28822121-28822140 | None:intergenic | 45.0% | |
| TCAGAACATAGGCCATTGAG+TGG | - | chr3_1:28822120-28822139 | Msa0355080:intron | 45.0% | |
| CAGAACATAGGCCATTGAGT+GGG | - | chr3_1:28822121-28822140 | Msa0355080:intron | 45.0% | |
| ! | CATACTTCGGCAAGTGTTGT+GGG | + | chr3_1:28822153-28822172 | None:intergenic | 45.0% |
| ! | ACATACTTCGGCAAGTGTTG+TGG | + | chr3_1:28822154-28822173 | None:intergenic | 45.0% |
| ACCATTTCAGCTGGGTTTGA+AGG | - | chr3_1:28822253-28822272 | Msa0355080:intron | 45.0% | |
| TCCTTCAAACCCAGCTGAAA+TGG | + | chr3_1:28822257-28822276 | None:intergenic | 45.0% | |
| GAAGGCTAATGCTCTTCTTC+TGG | - | chr3_1:28822328-28822347 | Msa0355080:intron | 45.0% | |
| TTAACCCATGTCGCTAGTTG+AGG | - | chr3_1:28822533-28822552 | Msa0355080:intron | 45.0% | |
| TTCACCTCAACTAGCGACAT+GGG | + | chr3_1:28822540-28822559 | None:intergenic | 45.0% | |
| ATTCACCTCAACTAGCGACA+TGG | + | chr3_1:28822541-28822560 | None:intergenic | 45.0% | |
| CATGGGGAACTCTTGAATGT+AGG | - | chr3_1:28822588-28822607 | Msa0355080:CDS | 45.0% | |
| TCTTGAATGTAGGGCAAGTG+TGG | - | chr3_1:28822598-28822617 | Msa0355080:exon | 45.0% | |
| !! | TAATCATATTTATATATAAA+TGG | + | chr3_1:28820875-28820894 | None:intergenic | 5.0% |
| GTGGCCATTGAGGGTAGAAT+GGG | + | chr3_1:28818509-28818528 | None:intergenic | 50.0% | |
| AGTGGCCATTGAGGGTAGAA+TGG | + | chr3_1:28818510-28818529 | None:intergenic | 50.0% | |
| AGAATCGGAAGGAGGTTGAG+TGG | + | chr3_1:28818528-28818547 | None:intergenic | 50.0% | |
| ! | TTGAGACCGGAGGGAGTATA+TGG | - | chr3_1:28819546-28819565 | Msa0355080:intron | 50.0% |
| !! | CAGAAGTGTCAGTGCTACTG+AGG | + | chr3_1:28819949-28819968 | None:intergenic | 50.0% |
| CCAGACATCGAGGATTGTGA+GGG | + | chr3_1:28820476-28820495 | None:intergenic | 50.0% | |
| ACCAGACATCGAGGATTGTG+AGG | + | chr3_1:28820477-28820496 | None:intergenic | 50.0% | |
| GTGTCCCATGACAATCCTTC+TGG | + | chr3_1:28820725-28820744 | None:intergenic | 50.0% | |
| GGCCTTTCGAGACAACAGAA+TGG | - | chr3_1:28820784-28820803 | Msa0355080:intron | 50.0% | |
| GCGACAACAGTATTGTTCCG+TGG | - | chr3_1:28821237-28821256 | Msa0355080:intron | 50.0% | |
| CTTCGATTGCCGAGGATGAT+TGG | + | chr3_1:28821917-28821936 | None:intergenic | 50.0% | |
| GAAGGATGCTGCAAAGCTTG+TGG | - | chr3_1:28822271-28822290 | Msa0355080:intron | 50.0% | |
| ATGTAGGGCAAGTGTGGAGT+TGG | - | chr3_1:28822604-28822623 | Msa0355080:exon | 50.0% | |
| GTTGGACATGGCCTGTGTTA+TGG | - | chr3_1:28822622-28822641 | Msa0355080:five_prime_UTR | 50.0% | |
| GGAGGTTGAGTGGCCATTGA+GGG | + | chr3_1:28818518-28818537 | None:intergenic | 55.0% | |
| AGGAGGTTGAGTGGCCATTG+AGG | + | chr3_1:28818519-28818538 | None:intergenic | 55.0% | |
| ACGTCGAGAGAATCGGAAGG+AGG | + | chr3_1:28818536-28818555 | None:intergenic | 55.0% | |
| TCGACGTCGAGAGAATCGGA+AGG | + | chr3_1:28818539-28818558 | None:intergenic | 55.0% | |
| GTCGTCGACGTCGAGAGAAT+CGG | + | chr3_1:28818543-28818562 | None:intergenic | 55.0% | |
| ! | CGACGTCGACGACTACGTTT+TGG | - | chr3_1:28818550-28818569 | Msa0355080:intron | 55.0% |
| CCACACTAACACGTCGACAC+TGG | + | chr3_1:28820068-28820087 | None:intergenic | 55.0% | |
| !! | CCAGTGTCGACGTGTTAGTG+TGG | - | chr3_1:28820065-28820084 | Msa0355080:intron | 55.0% |
| CGACGTGTTAGTGTGGTGTC+AGG | - | chr3_1:28820072-28820091 | Msa0355080:intron | 55.0% | |
| TCATAGGTCCGGACTCGCAA+CGG | - | chr3_1:28820111-28820130 | Msa0355080:intron | 55.0% | |
| CCCTCACAATCCTCGATGTC+TGG | - | chr3_1:28820473-28820492 | Msa0355080:intron | 55.0% | |
| AAGCTGCACTTCGATTGCCG+AGG | + | chr3_1:28821925-28821944 | None:intergenic | 55.0% | |
| GTGGGATCAAGCCCACTCAA+TGG | + | chr3_1:28822135-28822154 | None:intergenic | 55.0% | |
| GGCAAGTGTGGAGTTGGACA+TGG | - | chr3_1:28822610-28822629 | Msa0355080:exon | 55.0% | |
| GACACTCTCCGTTGCGAGTC+CGG | + | chr3_1:28820122-28820141 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 28818402 | 28822732 | 28818402 | ID=Msa0355080;Name=Msa0355080 |
| chr3_1 | mRNA | 28818402 | 28822732 | 28818402 | ID=Msa0355080-mRNA-1;Parent=Msa0355080;Name=Msa0355080-mRNA-1;_AED=0.00;_eAED=0.00;_QI=119|1|1|1|1|1|6|72|151 |
| chr3_1 | exon | 28818402 | 28818524 | 28818402 | ID=Msa0355080-mRNA-1:exon:6013;Parent=Msa0355080-mRNA-1 |
| chr3_1 | exon | 28818785 | 28818871 | 28818785 | ID=Msa0355080-mRNA-1:exon:6012;Parent=Msa0355080-mRNA-1 |
| chr3_1 | exon | 28818967 | 28819051 | 28818967 | ID=Msa0355080-mRNA-1:exon:6011;Parent=Msa0355080-mRNA-1 |
| chr3_1 | exon | 28819183 | 28819265 | 28819183 | ID=Msa0355080-mRNA-1:exon:6010;Parent=Msa0355080-mRNA-1 |
| chr3_1 | exon | 28820323 | 28820421 | 28820323 | ID=Msa0355080-mRNA-1:exon:6009;Parent=Msa0355080-mRNA-1 |
| chr3_1 | exon | 28822563 | 28822732 | 28822563 | ID=Msa0355080-mRNA-1:exon:6008;Parent=Msa0355080-mRNA-1 |
| chr3_1 | five_prime_UTR | 28822614 | 28822732 | 28822614 | ID=Msa0355080-mRNA-1:five_prime_utr;Parent=Msa0355080-mRNA-1 |
| chr3_1 | CDS | 28822563 | 28822613 | 28822563 | ID=Msa0355080-mRNA-1:cds;Parent=Msa0355080-mRNA-1 |
| chr3_1 | CDS | 28820323 | 28820421 | 28820323 | ID=Msa0355080-mRNA-1:cds;Parent=Msa0355080-mRNA-1 |
| chr3_1 | CDS | 28819183 | 28819265 | 28819183 | ID=Msa0355080-mRNA-1:cds;Parent=Msa0355080-mRNA-1 |
| chr3_1 | CDS | 28818967 | 28819051 | 28818967 | ID=Msa0355080-mRNA-1:cds;Parent=Msa0355080-mRNA-1 |
| chr3_1 | CDS | 28818785 | 28818871 | 28818785 | ID=Msa0355080-mRNA-1:cds;Parent=Msa0355080-mRNA-1 |
| chr3_1 | CDS | 28818474 | 28818524 | 28818474 | ID=Msa0355080-mRNA-1:cds;Parent=Msa0355080-mRNA-1 |
| chr3_1 | three_prime_UTR | 28818402 | 28818473 | 28818402 | ID=Msa0355080-mRNA-1:three_prime_utr;Parent=Msa0355080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
