Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0201330 | KEH37408.1 | 89.234 | 483 | 21 | 1 | 1 | 452 | 99 | 581 | 0.0 | 864 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0201330 | A0A396J5U6 | 89.234 | 483 | 21 | 1 | 1 | 452 | 102 | 584 | 0.0 | 864 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012520 | Msa0201330 | 0.849743 | 2.657877e-60 | -8.615850e-47 |
| Msa0041000 | Msa0201330 | 0.808312 | 3.295384e-50 | -8.615850e-47 |
| Msa0051460 | Msa0201330 | 0.800154 | 1.646541e-48 | -8.615850e-47 |
| Msa0088550 | Msa0201330 | 0.825812 | 3.821354e-54 | -8.615850e-47 |
| Msa0101840 | Msa0201330 | 0.811936 | 5.455961e-51 | -8.615850e-47 |
| Msa0106370 | Msa0201330 | -0.804335 | 2.269408e-49 | -8.615850e-47 |
| Msa0124110 | Msa0201330 | 0.822294 | 2.558073e-53 | -8.615850e-47 |
| Msa0135360 | Msa0201330 | 0.823362 | 1.442810e-53 | -8.615850e-47 |
| Msa0141230 | Msa0201330 | 0.805231 | 1.475051e-49 | -8.615850e-47 |
| Msa0142240 | Msa0201330 | 0.845246 | 4.576439e-59 | -8.615850e-47 |
| Msa0143920 | Msa0201330 | 0.803750 | 3.003257e-49 | -8.615850e-47 |
| Msa0152420 | Msa0201330 | 0.849460 | 3.188768e-60 | -8.615850e-47 |
| Msa0153440 | Msa0201330 | 0.805206 | 1.493232e-49 | -8.615850e-47 |
| Msa0165430 | Msa0201330 | 0.823407 | 1.408116e-53 | -8.615850e-47 |
| Msa0179860 | Msa0201330 | 0.815843 | 7.508765e-52 | -8.615850e-47 |
| Msa0180300 | Msa0201330 | 0.803993 | 2.674266e-49 | -8.615850e-47 |
| Msa0185640 | Msa0201330 | -0.809644 | 1.708981e-50 | -8.615850e-47 |
| Msa0201330 | Msa0201370 | 0.939201 | 1.891263e-99 | -8.615850e-47 |
| Msa0201330 | Msa0201390 | 0.865194 | 7.046159e-65 | -8.615850e-47 |
| Msa0201330 | Msa0208390 | 0.808921 | 2.442221e-50 | -8.615850e-47 |
| Msa0201330 | Msa0243910 | 0.956729 | 1.481493e-114 | -8.615850e-47 |
| Msa0201330 | Msa0243930 | 0.951515 | 1.734773e-109 | -8.615850e-47 |
| Msa0201330 | Msa0243940 | 0.872779 | 2.445488e-67 | -8.615850e-47 |
| Msa0201330 | Msa0245880 | 0.827922 | 1.196993e-54 | -8.615850e-47 |
| Msa0201330 | Msa0282590 | 0.942737 | 4.228639e-102 | -8.615850e-47 |
| Msa0201330 | Msa0282600 | 0.865469 | 5.774225e-65 | -8.615850e-47 |
| Msa0201330 | Msa0304740 | 0.819038 | 1.432781e-52 | -8.615850e-47 |
| Msa0201330 | Msa0304990 | 0.803382 | 3.581005e-49 | -8.615850e-47 |
| Msa0201330 | Msa0331590 | 0.829102 | 6.211233e-55 | -8.615850e-47 |
| Msa0201330 | Msa0331920 | 0.824739 | 6.855382e-54 | -8.615850e-47 |
| Msa0201330 | Msa0342340 | -0.806562 | 7.744195e-50 | -8.615850e-47 |
| Msa0201330 | Msa0362740 | 0.838481 | 2.802964e-57 | -8.615850e-47 |
| Msa0201330 | Msa0369360 | 0.825784 | 3.880322e-54 | -8.615850e-47 |
| Msa0201330 | Msa0399210 | 0.800899 | 1.160769e-48 | -8.615850e-47 |
| Msa0201330 | Msa0405250 | -0.804694 | 1.910652e-49 | -8.615850e-47 |
| Msa0201330 | Msa0416800 | 0.839704 | 1.351277e-57 | -8.615850e-47 |
| Msa0201330 | Msa0431710 | 0.800119 | 1.673466e-48 | -8.615850e-47 |
| Msa0201330 | Msa0457370 | 0.828202 | 1.025139e-54 | -8.615850e-47 |
| Msa0201330 | Msa0463460 | 0.845824 | 3.190307e-59 | -8.615850e-47 |
| Msa0201330 | Msa0493850 | 0.828745 | 7.577899e-55 | -8.615850e-47 |
| Msa0201330 | Msa0509020 | 0.849243 | 3.663398e-60 | -8.615850e-47 |
| Msa0201330 | Msa0533290 | 0.809286 | 2.039565e-50 | -8.615850e-47 |
| Msa0201330 | Msa0557680 | 0.836702 | 8.015983e-57 | -8.615850e-47 |
| Msa0201330 | Msa0562650 | 0.817287 | 3.565457e-52 | -8.615850e-47 |
| Msa0201330 | Msa0586430 | 0.836091 | 1.146727e-56 | -8.615850e-47 |
| Msa0201330 | Msa0616560 | -0.817456 | 3.266625e-52 | -8.615850e-47 |
| Msa0201330 | Msa0626470 | 0.855784 | 4.998822e-62 | -8.615850e-47 |
| Msa0201330 | Msa0629890 | 0.813606 | 2.351146e-51 | -8.615850e-47 |
| Msa0201330 | Msa0641020 | 0.814708 | 1.342910e-51 | -8.615850e-47 |
| Msa0201330 | Msa0645460 | 0.804288 | 2.321745e-49 | -8.615850e-47 |
| Msa0201330 | Msa0653020 | 0.821182 | 4.625760e-53 | -8.615850e-47 |
| Msa0201330 | Msa0655990 | -0.811041 | 8.537056e-51 | -8.615850e-47 |
| Msa0201330 | Msa0658570 | 0.800095 | 1.692822e-48 | -8.615850e-47 |
| Msa0201330 | Msa0660870 | 0.805126 | 1.551951e-49 | -8.615850e-47 |
| Msa0201330 | Msa0664160 | 0.848531 | 5.777048e-60 | -8.615850e-47 |
| Msa0201330 | Msa0692620 | 0.816535 | 5.260871e-52 | -8.615850e-47 |
| Msa0201330 | Msa0695410 | 0.813112 | 3.017928e-51 | -8.615850e-47 |
| Msa0201330 | Msa0696740 | 0.800618 | 1.324310e-48 | -8.615850e-47 |
| Msa0201330 | Msa0696770 | 0.803194 | 3.916891e-49 | -8.615850e-47 |
| Msa0201330 | Msa0703490 | 0.816872 | 4.420903e-52 | -8.615850e-47 |
| Msa0201330 | Msa0708330 | 0.805396 | 1.362113e-49 | -8.615850e-47 |
| Msa0201330 | Msa0715720 | 0.803686 | 3.097030e-49 | -8.615850e-47 |
| Msa0201330 | Msa0718240 | 0.802513 | 5.414306e-49 | -8.615850e-47 |
| Msa0201330 | Msa0719490 | -0.830891 | 2.274072e-55 | -8.615850e-47 |
| Msa0201330 | Msa0722930 | 0.818926 | 1.519279e-52 | -8.615850e-47 |
| Msa0201330 | Msa0723140 | 0.815821 | 7.597586e-52 | -8.615850e-47 |
| Msa0201330 | Msa0723320 | 0.807032 | 6.162935e-50 | -8.615850e-47 |
| Msa0201330 | Msa0723430 | 0.806335 | 8.647726e-50 | -8.615850e-47 |
| Msa0201330 | Msa0733200 | 0.864694 | 1.011348e-64 | -8.615850e-47 |
| Msa0201330 | Msa0736060 | 0.827860 | 1.238628e-54 | -8.615850e-47 |
| Msa0201330 | Msa0744500 | 0.801485 | 8.806781e-49 | -8.615850e-47 |
| Msa0201330 | Msa0773610 | 0.811662 | 6.259251e-51 | -8.615850e-47 |
| Msa0201330 | Msa0776030 | 0.812525 | 4.057979e-51 | -8.615850e-47 |
| Msa0201330 | Msa0777930 | 0.815105 | 1.096114e-51 | -8.615850e-47 |
| Msa0201330 | Msa0788360 | 0.812448 | 4.218284e-51 | -8.615850e-47 |
| Msa0201330 | Msa0811000 | 0.806863 | 6.690275e-50 | -8.615850e-47 |
| Msa0201330 | Msa0811790 | 0.825439 | 4.683845e-54 | -8.615850e-47 |
| Msa0201330 | Msa0826650 | 0.819650 | 1.039086e-52 | -8.615850e-47 |
| Msa0201330 | Msa0839230 | 0.825589 | 4.316008e-54 | -8.615850e-47 |
| Msa0201330 | Msa0843280 | 0.811930 | 5.472146e-51 | -8.615850e-47 |
| Msa0201330 | Msa0862020 | 0.801410 | 9.124201e-49 | -8.615850e-47 |
| Msa0201330 | Msa0864690 | 0.820726 | 5.890779e-53 | -8.615850e-47 |
| Msa0201330 | Msa0884890 | 0.814521 | 1.476821e-51 | -8.615850e-47 |
| Msa0201330 | Msa0885240 | 0.810259 | 1.259727e-50 | -8.615850e-47 |
| Msa0201330 | Msa0886660 | 0.851486 | 8.601077e-61 | -8.615850e-47 |
| Msa0201330 | Msa0902980 | 0.825656 | 4.161560e-54 | -8.615850e-47 |
| Msa0201330 | Msa0912470 | 0.807615 | 4.634981e-50 | -8.615850e-47 |
| Msa0201330 | Msa0921630 | 0.816941 | 4.264873e-52 | -8.615850e-47 |
| Msa0201330 | Msa0946120 | 0.827150 | 1.834124e-54 | -8.615850e-47 |
| Msa0201330 | Msa0946680 | 0.821147 | 4.712535e-53 | -8.615850e-47 |
| Msa0201330 | Msa0951720 | 0.816092 | 6.607774e-52 | -8.615850e-47 |
| Msa0201330 | Msa0965520 | 0.802452 | 5.572900e-49 | -8.615850e-47 |
| Msa0201330 | Msa0968320 | -0.825717 | 4.025761e-54 | -8.615850e-47 |
| Msa0201330 | Msa0987890 | 0.801466 | 8.884459e-49 | -8.615850e-47 |
| Msa0201330 | Msa0996130 | 0.803545 | 3.312794e-49 | -8.615850e-47 |
| Msa0201330 | Msa1000020 | 0.812932 | 3.306091e-51 | -8.615850e-47 |
| Msa0201330 | Msa1001200 | 0.826583 | 2.505441e-54 | -8.615850e-47 |
| Msa0201330 | Msa1008340 | 0.867959 | 9.314613e-66 | -8.615850e-47 |
| Msa0201330 | Msa1009020 | 0.820593 | 6.318302e-53 | -8.615850e-47 |
| Msa0201330 | Msa1026500 | 0.828648 | 8.001170e-55 | -8.615850e-47 |
| Msa0201330 | Msa1029090 | 0.806490 | 8.021539e-50 | -8.615850e-47 |
| Msa0201330 | Msa1036390 | 0.802239 | 6.163828e-49 | -8.615850e-47 |
| Msa0201330 | Msa1041730 | 0.814942 | 1.191466e-51 | -8.615850e-47 |
| Msa0201330 | Msa1042710 | 0.821980 | 3.025160e-53 | -8.615850e-47 |
| Msa0201330 | Msa1044090 | 0.941650 | 2.872283e-101 | -8.615850e-47 |
| Msa0201330 | Msa1049950 | 0.842451 | 2.565895e-58 | -8.615850e-47 |
| Msa0201330 | Msa1074570 | 0.812407 | 4.305450e-51 | -8.615850e-47 |
| Msa0201330 | Msa1076460 | 0.818736 | 1.677491e-52 | -8.615850e-47 |
| Msa0201330 | Msa1076470 | 0.811571 | 6.549007e-51 | -8.615850e-47 |
| Msa0201330 | Msa1076480 | 0.836282 | 1.025415e-56 | -8.615850e-47 |
| Msa0201330 | Msa1083410 | 0.833328 | 5.681866e-56 | -8.615850e-47 |
| Msa0201330 | Msa1100170 | 0.828884 | 7.015516e-55 | -8.615850e-47 |
| Msa0201330 | Msa1111760 | 0.842347 | 2.733116e-58 | -8.615850e-47 |
| Msa0201330 | Msa1121660 | 0.810597 | 1.064765e-50 | -8.615850e-47 |
| Msa0201330 | Msa1122660 | 0.830279 | 3.212317e-55 | -8.615850e-47 |
| Msa0201330 | Msa1125080 | 0.812253 | 4.652199e-51 | -8.615850e-47 |
| Msa0201330 | Msa1128160 | 0.806835 | 6.782356e-50 | -8.615850e-47 |
| Msa0201330 | Msa1130350 | 0.805615 | 1.225424e-49 | -8.615850e-47 |
| Msa0201330 | Msa1139240 | 0.873212 | 1.751011e-67 | -8.615850e-47 |
| Msa0201330 | Msa1154070 | 0.844237 | 8.563233e-59 | -8.615850e-47 |
| Msa0201330 | Msa1156180 | 0.811113 | 8.236594e-51 | -8.615850e-47 |
| Msa0201330 | Msa1165360 | 0.806677 | 7.324511e-50 | -8.615850e-47 |
| Msa0201330 | Msa1167220 | 0.827346 | 1.645741e-54 | -8.615850e-47 |
| Msa0201330 | Msa1177060 | 0.825799 | 3.849663e-54 | -8.615850e-47 |
| Msa0201330 | Msa1179120 | 0.807589 | 4.695376e-50 | -8.615850e-47 |
| Msa0201330 | Msa1188420 | 0.801417 | 9.092221e-49 | -8.615850e-47 |
| Msa0201330 | Msa1204980 | -0.804747 | 1.862107e-49 | -8.615850e-47 |
| Msa0201330 | Msa1209560 | 0.811221 | 7.801919e-51 | -8.615850e-47 |
| Msa0201330 | Msa1239310 | 0.801202 | 1.006118e-48 | -8.615850e-47 |
| Msa0201330 | Msa1246040 | 0.828820 | 7.269195e-55 | -8.615850e-47 |
| Msa0201330 | Msa1254750 | 0.802390 | 5.738495e-49 | -8.615850e-47 |
| Msa0201330 | Msa1256540 | -0.810337 | 1.211776e-50 | -8.615850e-47 |
| Msa0201330 | Msa1261470 | 0.808962 | 2.393395e-50 | -8.615850e-47 |
| Msa0201330 | Msa1267200 | 0.832465 | 9.306270e-56 | -8.615850e-47 |
| Msa0201330 | Msa1271280 | 0.817500 | 3.192832e-52 | -8.615850e-47 |
| Msa0201330 | Msa1271290 | 0.811187 | 7.935430e-51 | -8.615850e-47 |
| Msa0201330 | Msa1279860 | 0.812296 | 4.553850e-51 | -8.615850e-47 |
| Msa0201330 | Msa1279870 | 0.813250 | 2.814545e-51 | -8.615850e-47 |
| Msa0201330 | Msa1296960 | -0.815685 | 8.144417e-52 | -8.615850e-47 |
| Msa0201330 | Msa1298910 | 0.802282 | 6.041639e-49 | -8.615850e-47 |
| Msa0201330 | Msa1304180 | 0.805064 | 1.598598e-49 | -8.615850e-47 |
| Msa0201330 | Msa1316980 | 0.801833 | 7.472757e-49 | -8.615850e-47 |
| Msa0201330 | Msa1330530 | 0.813799 | 2.131472e-51 | -8.615850e-47 |
| Msa0201330 | Msa1335770 | 0.830381 | 3.032117e-55 | -8.615850e-47 |
| Msa0201330 | Msa1336470 | 0.807939 | 3.956683e-50 | -8.615850e-47 |
| Msa0201330 | Msa1340530 | 0.810423 | 1.161277e-50 | -8.615850e-47 |
| Msa0201330 | Msa1371080 | -0.833265 | 5.888819e-56 | -8.615850e-47 |
| Msa0201330 | Msa1377070 | 0.802909 | 4.486039e-49 | -8.615850e-47 |
| Msa0201330 | Msa1381940 | 0.804963 | 1.678344e-49 | -8.615850e-47 |
| Msa0201330 | Msa1424000 | 0.804215 | 2.403816e-49 | -8.615850e-47 |
| Msa0201330 | Msa1441200 | 0.808846 | 2.534430e-50 | -8.615850e-47 |
| Msa0201330 | Msa1445250 | 0.809566 | 1.776293e-50 | -8.615850e-47 |
| Msa0201330 | Msa1447440 | 0.800770 | 1.233266e-48 | -8.615850e-47 |
| Msa0201330 | Msa1454000 | 0.814398 | 1.571980e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0201330 | MtrunA17_Chr2g0297701 | 89.234 | 483 | 21 | 1 | 1 | 452 | 102 | 584 | 0.0 | 864 |
| Msa0201330 | MtrunA17_Chr2g0297691 | 50.924 | 487 | 199 | 4 | 4 | 451 | 220 | 705 | 2.10e-167 | 488 |
| Msa0201330 | MtrunA17_Chr2g0297481 | 48.671 | 489 | 208 | 4 | 1 | 451 | 2 | 485 | 2.22e-162 | 467 |
| Msa0201330 | MtrunA17_Chr2g0297681 | 49.485 | 485 | 205 | 4 | 6 | 451 | 220 | 703 | 5.56e-161 | 471 |
| Msa0201330 | MtrunA17_Chr2g0297651 | 48.560 | 486 | 211 | 3 | 4 | 451 | 220 | 704 | 1.75e-158 | 465 |
| Msa0201330 | MtrunA17_Chr2g0297711 | 51.893 | 449 | 195 | 4 | 6 | 451 | 110 | 540 | 4.67e-158 | 458 |
| Msa0201330 | MtrunA17_Chr2g0297491 | 55.523 | 344 | 149 | 2 | 111 | 451 | 49 | 391 | 1.10e-130 | 383 |
| Msa0201330 | MtrunA17_Chr5g0410201 | 39.820 | 334 | 188 | 5 | 112 | 439 | 1 | 327 | 2.17e-75 | 239 |
| Msa0201330 | MtrunA17_Chr5g0410271 | 39.091 | 330 | 188 | 5 | 117 | 440 | 5 | 327 | 2.50e-72 | 231 |
| Msa0201330 | MtrunA17_Chr5g0410171 | 39.077 | 325 | 185 | 5 | 119 | 437 | 414 | 731 | 1.00e-69 | 235 |
| Msa0201330 | MtrunA17_Chr6g0456141 | 37.463 | 339 | 190 | 4 | 116 | 436 | 46 | 380 | 1.13e-66 | 218 |
| Msa0201330 | MtrunA17_Chr5g0410371 | 40.753 | 292 | 170 | 2 | 150 | 438 | 4 | 295 | 1.68e-64 | 210 |
| Msa0201330 | MtrunA17_Chr5g0410461 | 41.356 | 295 | 165 | 3 | 150 | 438 | 171 | 463 | 6.27e-63 | 211 |
| Msa0201330 | MtrunA17_Chr5g0410341 | 36.061 | 330 | 198 | 5 | 118 | 441 | 425 | 747 | 1.47e-62 | 216 |
| Msa0201330 | MtrunA17_Chr5g0443001 | 38.801 | 317 | 177 | 4 | 123 | 438 | 302 | 602 | 2.38e-61 | 210 |
| Msa0201330 | MtrunA17_Chr6g0456101 | 38.739 | 333 | 198 | 5 | 119 | 450 | 423 | 750 | 3.91e-60 | 209 |
| Msa0201330 | MtrunA17_Chr6g0457101 | 38.235 | 306 | 180 | 4 | 150 | 452 | 400 | 699 | 6.30e-58 | 202 |
| Msa0201330 | MtrunA17_Chr3g0100301 | 32.227 | 422 | 256 | 10 | 25 | 434 | 4 | 407 | 9.22e-56 | 190 |
| Msa0201330 | MtrunA17_Chr5g0410581 | 37.000 | 300 | 176 | 4 | 145 | 435 | 497 | 792 | 2.79e-52 | 188 |
| Msa0201330 | MtrunA17_Chr3g0098481 | 35.395 | 291 | 181 | 4 | 150 | 434 | 39 | 328 | 5.16e-49 | 171 |
| Msa0201330 | MtrunA17_Chr2g0286601 | 33.226 | 310 | 201 | 3 | 126 | 433 | 370 | 675 | 1.30e-47 | 174 |
| Msa0201330 | MtrunA17_Chr5g0410191 | 42.857 | 189 | 107 | 1 | 248 | 436 | 2 | 189 | 4.03e-46 | 158 |
| Msa0201330 | MtrunA17_Chr2g0286551 | 34.333 | 300 | 185 | 4 | 148 | 445 | 371 | 660 | 1.39e-43 | 162 |
| Msa0201330 | MtrunA17_Chr1g0211541 | 27.837 | 467 | 305 | 8 | 2 | 445 | 54 | 511 | 1.52e-43 | 160 |
| Msa0201330 | MtrunA17_Chr3g0102001 | 35.135 | 296 | 182 | 3 | 148 | 436 | 442 | 734 | 6.28e-43 | 161 |
| Msa0201330 | MtrunA17_Chr5g0439061 | 36.082 | 291 | 181 | 3 | 148 | 434 | 438 | 727 | 1.02e-41 | 157 |
| Msa0201330 | MtrunA17_Chr3g0100741 | 31.068 | 309 | 208 | 4 | 112 | 419 | 274 | 578 | 1.16e-41 | 156 |
| Msa0201330 | MtrunA17_Chr3g0098531 | 31.541 | 279 | 185 | 4 | 161 | 434 | 3 | 280 | 1.73e-39 | 144 |
| Msa0201330 | MtrunA17_Chr2g0284501 | 34.333 | 300 | 187 | 5 | 132 | 430 | 357 | 647 | 3.06e-39 | 150 |
| Msa0201330 | MtrunA17_Chr5g0410451 | 45.098 | 153 | 84 | 0 | 243 | 395 | 36 | 188 | 2.02e-38 | 139 |
| Msa0201330 | MtrunA17_Chr3g0096941 | 29.936 | 314 | 210 | 5 | 112 | 419 | 270 | 579 | 4.95e-38 | 145 |
| Msa0201330 | MtrunA17_Chr1g0211531 | 27.252 | 444 | 293 | 10 | 3 | 421 | 79 | 517 | 8.52e-38 | 144 |
| Msa0201330 | MtrunA17_Chr5g0410541 | 46.622 | 148 | 78 | 1 | 248 | 395 | 23 | 169 | 6.91e-37 | 134 |
| Msa0201330 | MtrunA17_Chr2g0284541 | 34.211 | 304 | 185 | 6 | 134 | 430 | 334 | 629 | 3.60e-36 | 141 |
| Msa0201330 | MtrunA17_Chr2g0286561 | 36.224 | 196 | 125 | 0 | 238 | 433 | 5 | 200 | 2.09e-35 | 130 |
| Msa0201330 | MtrunA17_Chr3g0098301 | 27.809 | 356 | 246 | 6 | 88 | 433 | 39 | 393 | 1.21e-32 | 128 |
| Msa0201330 | MtrunA17_Chr2g0297531 | 33.673 | 196 | 93 | 2 | 6 | 164 | 7 | 202 | 2.29e-32 | 122 |
| Msa0201330 | MtrunA17_Chr5g0439081 | 33.171 | 205 | 128 | 3 | 248 | 451 | 15 | 211 | 1.45e-29 | 115 |
| Msa0201330 | MtrunA17_Chr5g0439051 | 40.526 | 190 | 111 | 2 | 248 | 436 | 19 | 207 | 3.58e-29 | 114 |
| Msa0201330 | MtrunA17_Chr5g0410511 | 34.759 | 187 | 115 | 3 | 248 | 427 | 2 | 188 | 5.71e-29 | 112 |
| Msa0201330 | MtrunA17_Chr2g0297611 | 58.140 | 86 | 35 | 1 | 254 | 339 | 1 | 85 | 1.49e-28 | 108 |
| Msa0201330 | MtrunA17_Chr2g0297521 | 61.628 | 86 | 32 | 1 | 240 | 325 | 1 | 85 | 1.74e-28 | 107 |
| Msa0201330 | MtrunA17_Chr2g0297631 | 37.097 | 124 | 78 | 0 | 1 | 124 | 222 | 345 | 1.96e-25 | 109 |
| Msa0201330 | MtrunA17_Chr5g0410181 | 40.299 | 134 | 71 | 3 | 307 | 436 | 2 | 130 | 6.01e-23 | 94.4 |
| Msa0201330 | MtrunA17_Chr2g0297621 | 40.164 | 122 | 70 | 2 | 112 | 230 | 1 | 122 | 1.38e-22 | 92.8 |
| Msa0201330 | MtrunA17_Chr1g0211511 | 30.660 | 212 | 139 | 3 | 150 | 358 | 20 | 226 | 3.07e-21 | 94.4 |
| Msa0201330 | MtrunA17_Chr2g0297501 | 39.326 | 89 | 54 | 0 | 4 | 92 | 5 | 93 | 4.83e-20 | 84.7 |
| Msa0201330 | MtrunA17_Chr3g0100921 | 34.677 | 124 | 81 | 0 | 296 | 419 | 1 | 124 | 1.72e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0201330 | AT3G18670.1 | 34.426 | 488 | 275 | 8 | 6 | 452 | 114 | 597 | 4.72e-88 | 280 |
| Msa0201330 | AT5G35810.1 | 43.582 | 335 | 183 | 3 | 120 | 448 | 8 | 342 | 1.23e-85 | 266 |
| Msa0201330 | AT3G18670.2 | 40.968 | 310 | 180 | 3 | 144 | 452 | 345 | 652 | 1.61e-72 | 241 |
| Msa0201330 | AT5G04690.1 | 32.196 | 469 | 270 | 9 | 14 | 438 | 148 | 612 | 1.26e-61 | 211 |
| Msa0201330 | AT5G04700.1 | 39.130 | 322 | 191 | 3 | 119 | 438 | 338 | 656 | 1.58e-59 | 206 |
| Msa0201330 | AT5G04730.1 | 39.535 | 301 | 178 | 3 | 150 | 448 | 301 | 599 | 2.80e-59 | 204 |
| Msa0201330 | AT3G54065.1 | 45.887 | 231 | 119 | 1 | 228 | 452 | 2 | 232 | 6.62e-57 | 188 |
| Msa0201330 | AT5G04690.2 | 35.826 | 321 | 198 | 4 | 119 | 438 | 333 | 646 | 2.94e-52 | 186 |
| Msa0201330 | AT5G04690.3 | 35.826 | 321 | 198 | 4 | 119 | 438 | 319 | 632 | 3.05e-52 | 186 |
| Msa0201330 | AT5G04680.2 | 36.254 | 331 | 196 | 5 | 119 | 438 | 202 | 528 | 1.24e-51 | 182 |
| Msa0201330 | AT5G04680.3 | 36.254 | 331 | 196 | 5 | 119 | 438 | 311 | 637 | 8.02e-51 | 182 |
| Msa0201330 | AT5G04680.4 | 36.254 | 331 | 196 | 5 | 119 | 438 | 325 | 651 | 9.08e-51 | 182 |
| Msa0201330 | AT5G04680.1 | 36.254 | 331 | 196 | 5 | 119 | 438 | 354 | 680 | 1.35e-50 | 182 |
| Msa0201330 | AT5G35830.1 | 38.346 | 133 | 73 | 5 | 6 | 135 | 150 | 276 | 4.73e-15 | 75.9 |
| Msa0201330 | AT4G03450.1 | 24.658 | 438 | 269 | 16 | 8 | 402 | 148 | 567 | 1.22e-13 | 73.6 |
| Msa0201330 | AT4G03450.2 | 24.944 | 445 | 259 | 17 | 8 | 402 | 148 | 567 | 1.62e-13 | 73.2 |
| Msa0201330 | AT4G03470.1 | 22.986 | 422 | 265 | 16 | 8 | 392 | 196 | 594 | 5.33e-12 | 68.6 |
Find 114 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTATAAACTCGGGACTTTA+TGG | 0.155576 | 2_1:+22658388 | Msa0201330:CDS |
| ATGAATTGTTGCCATCAATT+AGG | 0.186457 | 2_1:+22658239 | Msa0201330:CDS |
| TCGAGTATTTCTTTACATTT+AGG | 0.190510 | 2_1:-22658334 | None:intergenic |
| TCTTTGAAAGATTGCATAAA+TGG | 0.218928 | 2_1:+22659407 | Msa0201330:CDS |
| CATTAACATTACCATGAAAT+AGG | 0.220099 | 2_1:-22660343 | None:intergenic |
| ATTACAGATGAATGATTAAT+TGG | 0.224156 | 2_1:+22655605 | Msa0201330:five_prime_UTR |
| GCTGGTTTATCTAAATAATT+AGG | 0.228180 | 2_1:-22659862 | None:intergenic |
| CTGAGTTCCCATAACAAATT+AGG | 0.270857 | 2_1:-22659305 | None:intergenic |
| TGAATTGTTGCCATCAATTA+GGG | 0.271979 | 2_1:+22658240 | Msa0201330:CDS |
| AATATTTATATGGATCTAAT+TGG | 0.293864 | 2_1:+22655505 | Msa0201330:five_prime_UTR |
| TGAGAAAGGGTTAGGTTAAC+AGG | 0.298802 | 2_1:-22655468 | None:intergenic |
| TTGCAGAGAAATGGCTTTAG+AGG | 0.299985 | 2_1:+22657021 | Msa0201330:intron |
| CATATTATCATGGTTTGAAA+TGG | 0.303488 | 2_1:+22660088 | Msa0201330:CDS |
| ACATTTGTAGTTCTTTATTT+AGG | 0.305317 | 2_1:+22660205 | Msa0201330:CDS |
| CACTTATCCTAATTTGTTAT+GGG | 0.313348 | 2_1:+22659298 | Msa0201330:CDS |
| GCACTTATCCTAATTTGTTA+TGG | 0.313386 | 2_1:+22659297 | Msa0201330:CDS |
| GCAAGAACAGAAATAAAATT+AGG | 0.316156 | 2_1:-22660114 | None:intergenic |
| GATTTGCTCCCGCTGCAATA+TGG | 0.321893 | 2_1:-22658078 | None:intergenic |
| CTTCACAAAGCAGCACTAAA+AGG | 0.335945 | 2_1:+22657970 | Msa0201330:five_prime_UTR |
| CATGCAGAATTGCTTCAAAA+AGG | 0.338739 | 2_1:+22659721 | Msa0201330:CDS |
| TGTTCACTTTGTCGAGGAAT+TGG | 0.345157 | 2_1:+22658102 | Msa0201330:five_prime_UTR |
| CCATCATCTCTGAGTCATCT+AGG | 0.345769 | 2_1:-22659196 | None:intergenic |
| CACGTGATTGAATATTTATA+TGG | 0.349262 | 2_1:+22655495 | Msa0201330:five_prime_UTR |
| ACTAATGCACCGTGATCATT+TGG | 0.358694 | 2_1:+22658129 | Msa0201330:exon |
| GAAGGGGAACACATTGGTTT+AGG | 0.361388 | 2_1:-22657951 | None:intergenic |
| GTTGTGACTTACTATCATTA+TGG | 0.366229 | 2_1:-22655544 | None:intergenic |
| TGTTCAACTTGCTGAGATAT+TGG | 0.369153 | 2_1:+22658207 | Msa0201330:CDS |
| CTGTCTAAACTGGCTAGATT+TGG | 0.370912 | 2_1:-22657050 | None:intergenic |
| TTGTTTCCTTTGCAGAGAAA+TGG | 0.387889 | 2_1:+22657012 | Msa0201330:intron |
| TAATTGGAGTGGACCACTTT+TGG | 0.392366 | 2_1:+22655621 | Msa0201330:five_prime_UTR |
| AAGGCATTGCGCCTATTTCA+TGG | 0.394651 | 2_1:+22660332 | Msa0201330:three_prime_UTR |
| TTAAGCTTATACGACGCATC+TGG | 0.395130 | 2_1:+22659159 | Msa0201330:CDS |
| GGTTGCCCAGCCATTTGTTA+TGG | 0.404362 | 2_1:-22658050 | None:intergenic |
| CCTTGTCCACCCCTAATTGA+TGG | 0.405706 | 2_1:-22658250 | None:intergenic |
| CACAAATAACGCCACTAGTC+CGG | 0.427785 | 2_1:-22660019 | None:intergenic |
| CTAAAAGGTGATTGGGAAGA+AGG | 0.429429 | 2_1:+22657985 | Msa0201330:five_prime_UTR |
| AAGCAGCACTAAAAGGTGAT+TGG | 0.435433 | 2_1:+22657977 | Msa0201330:five_prime_UTR |
| AAATGATGCTCGAATTATCA+TGG | 0.437423 | 2_1:+22659522 | Msa0201330:CDS |
| AGGTGTTACTCCTCTTTACT+TGG | 0.437846 | 2_1:+22658270 | Msa0201330:CDS |
| ATATTATCATGGTTTGAAAT+GGG | 0.443778 | 2_1:+22660089 | Msa0201330:CDS |
| CTCTGCAATGAAATTGATTG+AGG | 0.445736 | 2_1:-22657911 | None:intergenic |
| ACGATTATCGCTGCAGAAGT+TGG | 0.450896 | 2_1:+22659245 | Msa0201330:CDS |
| TTCTACATAACATATTATCA+TGG | 0.459801 | 2_1:+22660078 | Msa0201330:CDS |
| AGCAGCACTAAAAGGTGATT+GGG | 0.459876 | 2_1:+22657978 | Msa0201330:five_prime_UTR |
| TTGCCTTTGAAGTTGATATC+CGG | 0.466565 | 2_1:+22660000 | Msa0201330:CDS |
| GTTTCGACTCTCATAGCTAC+AGG | 0.467654 | 2_1:+22659784 | Msa0201330:CDS |
| CCTAGATGACTCAGAGATGA+TGG | 0.470237 | 2_1:+22659196 | Msa0201330:CDS |
| GAGACTATATTGAGCCGATC+AGG | 0.472006 | 2_1:-22659485 | None:intergenic |
| AGACCAAGATCCAACATTGC+TGG | 0.474280 | 2_1:+22658021 | Msa0201330:five_prime_UTR |
| GTAAGTCACAACTAACCATT+TGG | 0.474715 | 2_1:+22655555 | Msa0201330:five_prime_UTR |
| CTGGTTTCTGCCATAACAAA+TGG | 0.478082 | 2_1:+22658040 | Msa0201330:five_prime_UTR |
| GCAAACAGCGAATTCTTGTA+TGG | 0.482111 | 2_1:+22659759 | Msa0201330:CDS |
| AAACCAGCAATGTTGGATCT+TGG | 0.484030 | 2_1:-22658024 | None:intergenic |
| CCTTGAGTCTCAACCAAAAG+TGG | 0.485968 | 2_1:-22655634 | None:intergenic |
| TCTGCAATGAAATTGATTGA+GGG | 0.490761 | 2_1:-22657910 | None:intergenic |
| CAATGTTAGCACCGCCTGAT+CGG | 0.494071 | 2_1:+22659471 | Msa0201330:CDS |
| TCAGCTGCATTTAGCTTACC+AGG | 0.494468 | 2_1:+22659814 | Msa0201330:CDS |
| GCTCCGCATATCGCGAGATA+AGG | 0.498008 | 2_1:-22659960 | None:intergenic |
| TTTCTGCCATAACAAATGGC+TGG | 0.500310 | 2_1:+22658044 | Msa0201330:five_prime_UTR |
| AAAGCAAATACGAGGAATGC+TGG | 0.502490 | 2_1:-22659880 | None:intergenic |
| ACCGCACTCCATATTGCAGC+GGG | 0.502589 | 2_1:+22658070 | Msa0201330:five_prime_UTR |
| TTCTGCCATAACAAATGGCT+GGG | 0.503617 | 2_1:+22658045 | Msa0201330:five_prime_UTR |
| TCTAAACTGGCTAGATTTGG+AGG | 0.504549 | 2_1:-22657047 | None:intergenic |
| GCTCGAATTATCATGGTTTG+AGG | 0.512843 | 2_1:+22659529 | Msa0201330:CDS |
| AAATAAAGAACTACAAATGT+AGG | 0.513663 | 2_1:-22660202 | None:intergenic |
| TTTGGAATTGCAAGATTGCT+CGG | 0.517151 | 2_1:+22658147 | Msa0201330:CDS |
| CTCAATCAATTTCATTGCAG+AGG | 0.521162 | 2_1:+22657912 | Msa0201330:five_prime_UTR |
| ATGGCAGAAACCAGCAATGT+TGG | 0.525271 | 2_1:-22658031 | None:intergenic |
| ATAAATAAGAGTCCACCAAA+TGG | 0.533306 | 2_1:-22655570 | None:intergenic |
| TTGGAATTGCAAGATTGCTC+GGG | 0.533926 | 2_1:+22658148 | Msa0201330:CDS |
| ATTTGCTTTATCCGACTCCA+TGG | 0.541197 | 2_1:+22659894 | Msa0201330:CDS |
| GTGTTATCATTGTTTCCACC+TGG | 0.542558 | 2_1:-22659832 | None:intergenic |
| TGTAAAACAGCCAAGTAAAG+AGG | 0.542761 | 2_1:-22658280 | None:intergenic |
| TTTAGTGCTGCTTTGTGAAG+GGG | 0.544540 | 2_1:-22657967 | None:intergenic |
| CTTTGTGAAGGGGAACACAT+TGG | 0.546773 | 2_1:-22657957 | None:intergenic |
| TGATCGGCTCAATATAGTCT+CGG | 0.546856 | 2_1:+22659487 | Msa0201330:CDS |
| CATCATCTCTGAGTCATCTA+GGG | 0.550587 | 2_1:-22659195 | None:intergenic |
| CCATCAATTAGGGGTGGACA+AGG | 0.554840 | 2_1:+22658250 | Msa0201330:CDS |
| GATCGGCTCAATATAGTCTC+GGG | 0.558296 | 2_1:+22659488 | Msa0201330:CDS |
| GTTCCTCACTTGTATAAACT+CGG | 0.560727 | 2_1:+22658378 | Msa0201330:CDS |
| GCGATAATCGTTACTTGAGA+AGG | 0.563363 | 2_1:-22659233 | None:intergenic |
| AAATACTCGAGGAAAACGAT+TGG | 0.569851 | 2_1:+22658347 | Msa0201330:CDS |
| TAGCGAATCATACGTTTACT+CGG | 0.572760 | 2_1:-22660228 | None:intergenic |
| CGTCGTATAAGCTTAAGCAT+TGG | 0.578723 | 2_1:-22659152 | None:intergenic |
| TAAGCTTATACGACGCATCT+GGG | 0.583865 | 2_1:+22659160 | Msa0201330:CDS |
| CGAGATAAGTGCCATGGAGT+CGG | 0.585094 | 2_1:-22659905 | None:intergenic |
| CGCATATCGCGAGATAAGGA+TGG | 0.586729 | 2_1:-22659956 | None:intergenic |
| CATCCTTATCTCGCGATATG+CGG | 0.590914 | 2_1:+22659957 | Msa0201330:CDS |
| GTTATGGGAACTCAGTAACA+AGG | 0.591126 | 2_1:+22659313 | Msa0201330:CDS |
| AAGCAAACAGTGAGATGGCA+TGG | 0.593244 | 2_1:+22658302 | Msa0201330:CDS |
| GAAGTTGATATCCGGACTAG+TGG | 0.593266 | 2_1:+22660008 | Msa0201330:CDS |
| AGACATATAAACAACGGTAT+CGG | 0.594156 | 2_1:-22660144 | None:intergenic |
| AGTCCGGATATCAACTTCAA+AGG | 0.603725 | 2_1:-22660003 | None:intergenic |
| TCAAAATGAAGATACTAGCA+TGG | 0.604184 | 2_1:-22659370 | None:intergenic |
| AGTCACAACTAACCATTTGG+TGG | 0.604746 | 2_1:+22655558 | Msa0201330:five_prime_UTR |
| AGATGAATGATTAATTGGAG+TGG | 0.613672 | 2_1:+22655610 | Msa0201330:five_prime_UTR |
| TGAAGACGAGATAAGTGCCA+TGG | 0.615834 | 2_1:-22659911 | None:intergenic |
| TTTACAAGCAAACAGTGAGA+TGG | 0.616121 | 2_1:+22658297 | Msa0201330:CDS |
| TTGTTGCCATCAATTAGGGG+TGG | 0.620541 | 2_1:+22658244 | Msa0201330:CDS |
| AACCGCACTCCATATTGCAG+CGG | 0.625156 | 2_1:+22658069 | Msa0201330:five_prime_UTR |
| AAATCATGTTCACTTTGTCG+AGG | 0.626112 | 2_1:+22658096 | Msa0201330:five_prime_UTR |
| ACTATATTGAGCCGATCAGG+CGG | 0.628275 | 2_1:-22659482 | None:intergenic |
| TTCCTCACTTGTATAAACTC+GGG | 0.633269 | 2_1:+22658379 | Msa0201330:CDS |
| CTTGCAATTCCAAATGATCA+CGG | 0.637982 | 2_1:-22658138 | None:intergenic |
| GTCCCGAGTTTATACAAGTG+AGG | 0.646956 | 2_1:-22658381 | None:intergenic |
| TTATGGGAACTCAGTAACAA+GGG | 0.656955 | 2_1:+22659314 | Msa0201330:CDS |
| GAATTGTTGCCATCAATTAG+GGG | 0.658510 | 2_1:+22658241 | Msa0201330:CDS |
| AACTGTAGACATATAAACAA+CGG | 0.659566 | 2_1:-22660150 | None:intergenic |
| GCTGCATTTAGCTTACCAGG+TGG | 0.684232 | 2_1:+22659817 | Msa0201330:CDS |
| TAAATGTAAAGAAATACTCG+AGG | 0.687289 | 2_1:+22658336 | Msa0201330:CDS |
| TCTTTCGTAAATAGTTCGCG+AGG | 0.694354 | 2_1:-22659697 | None:intergenic |
| TCCCGCTGCAATATGGAGTG+CGG | 0.708642 | 2_1:-22658071 | None:intergenic |
| AGTCGGATAAAGCAAATACG+AGG | 0.727881 | 2_1:-22659888 | None:intergenic |
| AAATGAAGATACTAGCATGG+CGG | 0.748249 | 2_1:-22659367 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTGTATAGTATATTTTT+TGG | - | chr2_1:22655800-22655819 | None:intergenic | 10.0% |
| !! | TATTACAAATTACAATATTA+TGG | - | chr2_1:22656264-22656283 | None:intergenic | 10.0% |
| !! | TTATTAACTATCATAAAATT+AGG | - | chr2_1:22656447-22656466 | None:intergenic | 10.0% |
| !!! | AGTTATGTTTTATTTTTAAA+TGG | + | chr2_1:22656517-22656536 | Msa0201330:intron | 10.0% |
| !! | TAAAGATATTTAATATCTTT+GGG | - | chr2_1:22657178-22657197 | None:intergenic | 10.0% |
| !! | AATATTTATATGGATCTAAT+TGG | + | chr2_1:22655505-22655524 | Msa0201330:five_prime_UTR | 15.0% |
| !! | GTTATAAAAGATAATGAAAA+TGG | - | chr2_1:22655739-22655758 | None:intergenic | 15.0% |
| !!! | AAAAGATAATTTCTTTTTGT+AGG | + | chr2_1:22656364-22656383 | Msa0201330:intron | 15.0% |
| !!! | AAAGATAATTTCTTTTTGTA+GGG | + | chr2_1:22656365-22656384 | Msa0201330:intron | 15.0% |
| !!! | ATATGTTTTATTTTCTTGAA+GGG | + | chr2_1:22656494-22656513 | Msa0201330:intron | 15.0% |
| !!! | TTTTTAACTTAAATGGAAAT+AGG | + | chr2_1:22656863-22656882 | Msa0201330:intron | 15.0% |
| !! | GTAAAGATATTTAATATCTT+TGG | - | chr2_1:22657179-22657198 | None:intergenic | 15.0% |
| !! | ATGATTTCTTAACAAAAAAT+AGG | + | chr2_1:22657548-22657567 | Msa0201330:intron | 15.0% |
| !! | AAATATTATCCAACATAATT+TGG | + | chr2_1:22658683-22658702 | Msa0201330:intron | 15.0% |
| !!! | ATTATATTTCTTAATTTGTG+TGG | - | chr2_1:22658951-22658970 | None:intergenic | 15.0% |
| !! | GTAATATTAATTAAACATTC+AGG | + | chr2_1:22659116-22659135 | Msa0201330:intron | 15.0% |
| !!! | TCTAATTGTTTTTAAATCTA+AGG | + | chr2_1:22660313-22660332 | Msa0201330:three_prime_UTR | 15.0% |
| !! | ATTACAGATGAATGATTAAT+TGG | + | chr2_1:22655605-22655624 | Msa0201330:five_prime_UTR | 20.0% |
| !!! | TTCATTATCTTTTATAACAC+CGG | + | chr2_1:22655741-22655760 | Msa0201330:intron | 20.0% |
| !! | GGACAAAAATAATATTAAAG+TGG | - | chr2_1:22655779-22655798 | None:intergenic | 20.0% |
| !!! | TAAAGTATTTTCAGTCTAAT+GGG | + | chr2_1:22656155-22656174 | Msa0201330:intron | 20.0% |
| !! | TACAAATTACAATATTATGG+AGG | - | chr2_1:22656261-22656280 | None:intergenic | 20.0% |
| !!! | GATATGTTTTATTTTCTTGA+AGG | + | chr2_1:22656493-22656512 | Msa0201330:intron | 20.0% |
| !! | ATGTTTATTCGTTTGAAAAT+AGG | - | chr2_1:22656809-22656828 | None:intergenic | 20.0% |
| !!! | GGGTAAATTTTTAACTTAAA+TGG | + | chr2_1:22656856-22656875 | Msa0201330:intron | 20.0% |
| !! | TGCTTATTAAACTTAATTAC+TGG | + | chr2_1:22656944-22656963 | Msa0201330:intron | 20.0% |
| !!! | CTGATTTTTTTTAAAGATAC+TGG | + | chr2_1:22656973-22656992 | Msa0201330:intron | 20.0% |
| !!! | TATTTGGCTAGATTTTAAAA+CGG | - | chr2_1:22657114-22657133 | None:intergenic | 20.0% |
| !! | AACAACCAATAACAATTATT+CGG | + | chr2_1:22657449-22657468 | Msa0201330:intron | 20.0% |
| !!! | TATGAATAGCATTTTTGTTA+TGG | + | chr2_1:22657487-22657506 | Msa0201330:intron | 20.0% |
| !! | AATATGTGTTAAACTTGAAA+CGG | + | chr2_1:22657510-22657529 | Msa0201330:intron | 20.0% |
| !! | TTCTTAACAAAAAATAGGAT+AGG | + | chr2_1:22657553-22657572 | Msa0201330:intron | 20.0% |
| !!! | TCATTTTGATACATGAAATA+AGG | + | chr2_1:22659384-22659403 | Msa0201330:CDS | 20.0% |
| !!! | TTTTTCATTTCAATCATATG+TGG | - | chr2_1:22659661-22659680 | None:intergenic | 20.0% |
| !! | ATTGAAATGAAAAATTCTGA+AGG | + | chr2_1:22659667-22659686 | Msa0201330:CDS | 20.0% |
| !! | TTCTACATAACATATTATCA+TGG | + | chr2_1:22660078-22660097 | Msa0201330:CDS | 20.0% |
| !!! | ATATTATCATGGTTTGAAAT+GGG | + | chr2_1:22660089-22660108 | Msa0201330:CDS | 20.0% |
| !! | AAATAAAGAACTACAAATGT+AGG | - | chr2_1:22660205-22660224 | None:intergenic | 20.0% |
| !!! | ACATTTGTAGTTCTTTATTT+AGG | + | chr2_1:22660205-22660224 | Msa0201330:CDS | 20.0% |
| ! | CACGTGATTGAATATTTATA+TGG | + | chr2_1:22655495-22655514 | Msa0201330:five_prime_UTR | 25.0% |
| ! | TGTAAGTATATGCGAATTAT+TGG | + | chr2_1:22655682-22655701 | Msa0201330:intron | 25.0% |
| ! | ATGATACTCAAGTTATTGTA+CGG | + | chr2_1:22655907-22655926 | Msa0201330:intron | 25.0% |
| ! | AAGTGATTTACCTTATATCT+CGG | + | chr2_1:22656126-22656145 | Msa0201330:intron | 25.0% |
| !!! | CTAAAGTATTTTCAGTCTAA+TGG | + | chr2_1:22656154-22656173 | Msa0201330:intron | 25.0% |
| !!! | ATCAAAGTCACTTTTAAGAA+TGG | + | chr2_1:22656558-22656577 | Msa0201330:intron | 25.0% |
| !!! | AAAATAGGAGTACTGATTAA+GGG | - | chr2_1:22656794-22656813 | None:intergenic | 25.0% |
| !!! | CTTATTTATCCATGGTTTTT+TGG | - | chr2_1:22656909-22656928 | None:intergenic | 25.0% |
| !! | AACATCATCTTATTTATCCA+TGG | - | chr2_1:22656917-22656936 | None:intergenic | 25.0% |
| !!! | ATTTGGCTAGATTTTAAAAC+GGG | - | chr2_1:22657113-22657132 | None:intergenic | 25.0% |
| !! | CAAATATTTTCTCATACAGA+GGG | + | chr2_1:22657128-22657147 | Msa0201330:intron | 25.0% |
| ! | ACAACCAATAACAATTATTC+GGG | + | chr2_1:22657450-22657469 | Msa0201330:intron | 25.0% |
| ! | ATATGTGTTAAACTTGAAAC+GGG | + | chr2_1:22657511-22657530 | Msa0201330:intron | 25.0% |
| !! | ATCTTAAAGATGATTTTGTG+AGG | - | chr2_1:22657629-22657648 | None:intergenic | 25.0% |
| ! | TCGAGTATTTCTTTACATTT+AGG | - | chr2_1:22658337-22658356 | None:intergenic | 25.0% |
| ! | TAAATGTAAAGAAATACTCG+AGG | + | chr2_1:22658336-22658355 | Msa0201330:CDS | 25.0% |
| ! | CCATAATATCCAAATTATGT+TGG | - | chr2_1:22658695-22658714 | None:intergenic | 25.0% |
| ! | CCAACATAATTTGGATATTA+TGG | + | chr2_1:22658692-22658711 | Msa0201330:intron | 25.0% |
| !!! | CACTTATCCTAATTTGTTAT+GGG | + | chr2_1:22659298-22659317 | Msa0201330:CDS | 25.0% |
| !! | TCTTTGAAAGATTGCATAAA+TGG | + | chr2_1:22659407-22659426 | Msa0201330:CDS | 25.0% |
| !! | GCTGGTTTATCTAAATAATT+AGG | - | chr2_1:22659865-22659884 | None:intergenic | 25.0% |
| ! | CATATTATCATGGTTTGAAA+TGG | + | chr2_1:22660088-22660107 | Msa0201330:CDS | 25.0% |
| ! | GCAAGAACAGAAATAAAATT+AGG | - | chr2_1:22660117-22660136 | None:intergenic | 25.0% |
| ! | AACTGTAGACATATAAACAA+CGG | - | chr2_1:22660153-22660172 | None:intergenic | 25.0% |
| ! | CATTAACATTACCATGAAAT+AGG | - | chr2_1:22660346-22660365 | None:intergenic | 25.0% |
| GTTGTGACTTACTATCATTA+TGG | - | chr2_1:22655547-22655566 | None:intergenic | 30.0% | |
| ATAAATAAGAGTCCACCAAA+TGG | - | chr2_1:22655573-22655592 | None:intergenic | 30.0% | |
| AGATGAATGATTAATTGGAG+TGG | + | chr2_1:22655610-22655629 | Msa0201330:five_prime_UTR | 30.0% | |
| AAAGTGGTAAAATGAATGAC+CGG | - | chr2_1:22655763-22655782 | None:intergenic | 30.0% | |
| ! | AAGTTATTGTACGGATGTTT+TGG | + | chr2_1:22655916-22655935 | Msa0201330:intron | 30.0% |
| !! | TTTAGAAGTACCGAGATATA+AGG | - | chr2_1:22656139-22656158 | None:intergenic | 30.0% |
| GTCTCTATGAAATTGAAATG+TGG | + | chr2_1:22656338-22656357 | Msa0201330:intron | 30.0% | |
| AGTTGTAGTTGCAAATTTAG+TGG | + | chr2_1:22656636-22656655 | Msa0201330:intron | 30.0% | |
| !! | GAAAATAGGAGTACTGATTA+AGG | - | chr2_1:22656795-22656814 | None:intergenic | 30.0% |
| AAGTTTCACGAAATAGGATA+TGG | + | chr2_1:22656835-22656854 | Msa0201330:intron | 30.0% | |
| AGTTTCACGAAATAGGATAT+GGG | + | chr2_1:22656836-22656855 | Msa0201330:intron | 30.0% | |
| TGTAAGATTCCAAAAAACCA+TGG | + | chr2_1:22656897-22656916 | Msa0201330:intron | 30.0% | |
| CCTCTGTATGAGAAAATATT+TGG | - | chr2_1:22657130-22657149 | None:intergenic | 30.0% | |
| ! | CCAAATATTTTCTCATACAG+AGG | + | chr2_1:22657127-22657146 | Msa0201330:intron | 30.0% |
| !!! | TAACTTTTTGGCTCGAAAAA+AGG | + | chr2_1:22657151-22657170 | Msa0201330:intron | 30.0% |
| ! | AATCGACTTTATGAAATGAG+AGG | + | chr2_1:22657306-22657325 | Msa0201330:intron | 30.0% |
| TGTTCCCGAATAATTGTTAT+TGG | - | chr2_1:22657457-22657476 | None:intergenic | 30.0% | |
| TCTGCAATGAAATTGATTGA+GGG | - | chr2_1:22657913-22657932 | None:intergenic | 30.0% | |
| TTGCAGAGGAACATAAAAAA+AGG | + | chr2_1:22657926-22657945 | Msa0201330:five_prime_UTR | 30.0% | |
| ATGAATTGTTGCCATCAATT+AGG | + | chr2_1:22658239-22658258 | Msa0201330:CDS | 30.0% | |
| TGAATTGTTGCCATCAATTA+GGG | + | chr2_1:22658240-22658259 | Msa0201330:CDS | 30.0% | |
| ATGTGAACTTACATAAATGC+AGG | - | chr2_1:22658862-22658881 | None:intergenic | 30.0% | |
| !! | ATACCTCACTTTAAAACAGA+TGG | - | chr2_1:22658914-22658933 | None:intergenic | 30.0% |
| ATCTCATCTCTCAATCTATT+AGG | - | chr2_1:22659036-22659055 | None:intergenic | 30.0% | |
| !! | GCACTTATCCTAATTTGTTA+TGG | + | chr2_1:22659297-22659316 | Msa0201330:CDS | 30.0% |
| TCAAAATGAAGATACTAGCA+TGG | - | chr2_1:22659373-22659392 | None:intergenic | 30.0% | |
| ! | AGATTGCATAAATGGTTTTC+TGG | + | chr2_1:22659415-22659434 | Msa0201330:CDS | 30.0% |
| ! | ATAAATGGTTTTCTGGATGA+TGG | + | chr2_1:22659422-22659441 | Msa0201330:CDS | 30.0% |
| AAATGATGCTCGAATTATCA+TGG | + | chr2_1:22659522-22659541 | Msa0201330:CDS | 30.0% | |
| AGACATATAAACAACGGTAT+CGG | - | chr2_1:22660147-22660166 | None:intergenic | 30.0% | |
| ! | TATGTCTACAGTTTTCTCTA+TGG | + | chr2_1:22660160-22660179 | Msa0201330:CDS | 30.0% |
| !! | AATCACGTGCTTTTGAGAAA+GGG | - | chr2_1:22655484-22655503 | None:intergenic | 35.0% |
| GTAAGTCACAACTAACCATT+TGG | + | chr2_1:22655555-22655574 | Msa0201330:five_prime_UTR | 35.0% | |
| ! | TAGACTTTTAGTGACTCATG+AGG | - | chr2_1:22655874-22655893 | None:intergenic | 35.0% |
| GTTATGAAACACTTCAGTCT+GGG | - | chr2_1:22656093-22656112 | None:intergenic | 35.0% | |
| AGTTATGAAACACTTCAGTC+TGG | - | chr2_1:22656094-22656113 | None:intergenic | 35.0% | |
| AACGAAACAAATTCACGCAA+AGG | + | chr2_1:22656595-22656614 | Msa0201330:intron | 35.0% | |
| ! | ATCTTCTTTGATGGACAACA+CGG | - | chr2_1:22656687-22656706 | None:intergenic | 35.0% |
| GTCCATCAAAGAAGATCTAA+AGG | + | chr2_1:22656691-22656710 | Msa0201330:intron | 35.0% | |
| CACCTTTAGATCTTCTTTGA+TGG | - | chr2_1:22656696-22656715 | None:intergenic | 35.0% | |
| TTGTTTCCTTTGCAGAGAAA+TGG | + | chr2_1:22657012-22657031 | Msa0201330:intron | 35.0% | |
| TACTAGTAGAAACTAAGTGG+AGG | - | chr2_1:22657081-22657100 | None:intergenic | 35.0% | |
| GCTTACTAGTAGAAACTAAG+TGG | - | chr2_1:22657084-22657103 | None:intergenic | 35.0% | |
| ! | TCATACAGAGGGTAACTTTT+TGG | + | chr2_1:22657139-22657158 | Msa0201330:intron | 35.0% |
| TGCATGACTCAAATGGTAAA+AGG | - | chr2_1:22657759-22657778 | None:intergenic | 35.0% | |
| TTCTGTATGCATGACTCAAA+TGG | - | chr2_1:22657766-22657785 | None:intergenic | 35.0% | |
| CTCTGCAATGAAATTGATTG+AGG | - | chr2_1:22657914-22657933 | None:intergenic | 35.0% | |
| CTCAATCAATTTCATTGCAG+AGG | + | chr2_1:22657912-22657931 | Msa0201330:five_prime_UTR | 35.0% | |
| !!! | TTTTAGTGCTGCTTTGTGAA+GGG | - | chr2_1:22657971-22657990 | None:intergenic | 35.0% |
| AAATCATGTTCACTTTGTCG+AGG | + | chr2_1:22658096-22658115 | Msa0201330:five_prime_UTR | 35.0% | |
| CTTGCAATTCCAAATGATCA+CGG | - | chr2_1:22658141-22658160 | None:intergenic | 35.0% | |
| ! | TTTGGAATTGCAAGATTGCT+CGG | + | chr2_1:22658147-22658166 | Msa0201330:CDS | 35.0% |
| !! | TGTTCAACTTGCTGAGATAT+TGG | + | chr2_1:22658207-22658226 | Msa0201330:CDS | 35.0% |
| GAATTGTTGCCATCAATTAG+GGG | + | chr2_1:22658241-22658260 | Msa0201330:CDS | 35.0% | |
| TGTAAAACAGCCAAGTAAAG+AGG | - | chr2_1:22658283-22658302 | None:intergenic | 35.0% | |
| TTTACAAGCAAACAGTGAGA+TGG | + | chr2_1:22658297-22658316 | Msa0201330:CDS | 35.0% | |
| AAATACTCGAGGAAAACGAT+TGG | + | chr2_1:22658347-22658366 | Msa0201330:CDS | 35.0% | |
| GTTCCTCACTTGTATAAACT+CGG | + | chr2_1:22658378-22658397 | Msa0201330:CDS | 35.0% | |
| TTCCTCACTTGTATAAACTC+GGG | + | chr2_1:22658379-22658398 | Msa0201330:CDS | 35.0% | |
| TGTATAAACTCGGGACTTTA+TGG | + | chr2_1:22658388-22658407 | Msa0201330:CDS | 35.0% | |
| AGTTGCATTTCAAGAACTAG+TGG | - | chr2_1:22658427-22658446 | None:intergenic | 35.0% | |
| !! | TCTATTGGCTCGAAAACATT+CGG | + | chr2_1:22658799-22658818 | Msa0201330:intron | 35.0% |
| TTTGTGGTTGTCAAAGTCTT+GGG | + | chr2_1:22658822-22658841 | Msa0201330:intron | 35.0% | |
| !!! | TCTCCATCTGTTTTAAAGTG+AGG | + | chr2_1:22658908-22658927 | Msa0201330:intron | 35.0% |
| CTGAGTTCCCATAACAAATT+AGG | - | chr2_1:22659308-22659327 | None:intergenic | 35.0% | |
| TTATGGGAACTCAGTAACAA+GGG | + | chr2_1:22659314-22659333 | Msa0201330:CDS | 35.0% | |
| AAATGAAGATACTAGCATGG+CGG | - | chr2_1:22659370-22659389 | None:intergenic | 35.0% | |
| !! | ACATATGTCATTGATTTCGC+AGG | + | chr2_1:22659615-22659634 | Msa0201330:intron | 35.0% |
| CATGCAGAATTGCTTCAAAA+AGG | + | chr2_1:22659721-22659740 | Msa0201330:CDS | 35.0% | |
| TGCTTCAAAAAGGAGAATCA+TGG | + | chr2_1:22659731-22659750 | Msa0201330:CDS | 35.0% | |
| !! | TTGCCTTTGAAGTTGATATC+CGG | + | chr2_1:22660000-22660019 | Msa0201330:CDS | 35.0% |
| TAGCGAATCATACGTTTACT+CGG | - | chr2_1:22660231-22660250 | None:intergenic | 35.0% | |
| TGAGAAAGGGTTAGGTTAAC+AGG | - | chr2_1:22655471-22655490 | None:intergenic | 40.0% | |
| !! | CAATCACGTGCTTTTGAGAA+AGG | - | chr2_1:22655485-22655504 | None:intergenic | 40.0% |
| AGTCACAACTAACCATTTGG+TGG | + | chr2_1:22655558-22655577 | Msa0201330:five_prime_UTR | 40.0% | |
| ! | TAATTGGAGTGGACCACTTT+TGG | + | chr2_1:22655621-22655640 | Msa0201330:five_prime_UTR | 40.0% |
| TTAGTGACTCATGAGGATAG+TGG | - | chr2_1:22655867-22655886 | None:intergenic | 40.0% | |
| !! | CACAAGTAGAGCTCTAAAGT+GGG | - | chr2_1:22655953-22655972 | None:intergenic | 40.0% |
| !! | ACACAAGTAGAGCTCTAAAG+TGG | - | chr2_1:22655954-22655973 | None:intergenic | 40.0% |
| ! | TCTTCTTTGATGGACAACAC+GGG | - | chr2_1:22656686-22656705 | None:intergenic | 40.0% |
| TGCGAGAAGTTTCACGAAAT+AGG | + | chr2_1:22656829-22656848 | Msa0201330:intron | 40.0% | |
| CTAAAGCCATTTCTCTGCAA+AGG | - | chr2_1:22657021-22657040 | None:intergenic | 40.0% | |
| !! | TTGCAGAGAAATGGCTTTAG+AGG | + | chr2_1:22657021-22657040 | Msa0201330:intron | 40.0% |
| TCTAAACTGGCTAGATTTGG+AGG | - | chr2_1:22657050-22657069 | None:intergenic | 40.0% | |
| CTGTCTAAACTGGCTAGATT+TGG | - | chr2_1:22657053-22657072 | None:intergenic | 40.0% | |
| !! | GTTTTAAGTCCCGTATTTGC+CGG | + | chr2_1:22657403-22657422 | Msa0201330:intron | 40.0% |
| !! | TTTAGTGCTGCTTTGTGAAG+GGG | - | chr2_1:22657970-22657989 | None:intergenic | 40.0% |
| !!! | CTTTTAGTGCTGCTTTGTGA+AGG | - | chr2_1:22657972-22657991 | None:intergenic | 40.0% |
| CTTCACAAAGCAGCACTAAA+AGG | + | chr2_1:22657970-22657989 | Msa0201330:five_prime_UTR | 40.0% | |
| AAGCAGCACTAAAAGGTGAT+TGG | + | chr2_1:22657977-22657996 | Msa0201330:five_prime_UTR | 40.0% | |
| AGCAGCACTAAAAGGTGATT+GGG | + | chr2_1:22657978-22657997 | Msa0201330:five_prime_UTR | 40.0% | |
| CTAAAAGGTGATTGGGAAGA+AGG | + | chr2_1:22657985-22658004 | Msa0201330:five_prime_UTR | 40.0% | |
| AAACCAGCAATGTTGGATCT+TGG | - | chr2_1:22658027-22658046 | None:intergenic | 40.0% | |
| CTGGTTTCTGCCATAACAAA+TGG | + | chr2_1:22658040-22658059 | Msa0201330:five_prime_UTR | 40.0% | |
| TTTCTGCCATAACAAATGGC+TGG | + | chr2_1:22658044-22658063 | Msa0201330:five_prime_UTR | 40.0% | |
| TTCTGCCATAACAAATGGCT+GGG | + | chr2_1:22658045-22658064 | Msa0201330:five_prime_UTR | 40.0% | |
| TGTTCACTTTGTCGAGGAAT+TGG | + | chr2_1:22658102-22658121 | Msa0201330:five_prime_UTR | 40.0% | |
| ACTAATGCACCGTGATCATT+TGG | + | chr2_1:22658129-22658148 | Msa0201330:exon | 40.0% | |
| TTGGAATTGCAAGATTGCTC+GGG | + | chr2_1:22658148-22658167 | Msa0201330:CDS | 40.0% | |
| !! | AGGTGTTACTCCTCTTTACT+TGG | + | chr2_1:22658270-22658289 | Msa0201330:CDS | 40.0% |
| ! | TGAGACGGGTTTACATCTAT+TGG | + | chr2_1:22658784-22658803 | Msa0201330:intron | 40.0% |
| GTTTGTGGTTGTCAAAGTCT+TGG | + | chr2_1:22658821-22658840 | Msa0201330:intron | 40.0% | |
| CGTCGTATAAGCTTAAGCAT+TGG | - | chr2_1:22659155-22659174 | None:intergenic | 40.0% | |
| TTAAGCTTATACGACGCATC+TGG | + | chr2_1:22659159-22659178 | Msa0201330:CDS | 40.0% | |
| TAAGCTTATACGACGCATCT+GGG | + | chr2_1:22659160-22659179 | Msa0201330:CDS | 40.0% | |
| CATCATCTCTGAGTCATCTA+GGG | - | chr2_1:22659198-22659217 | None:intergenic | 40.0% | |
| GCGATAATCGTTACTTGAGA+AGG | - | chr2_1:22659236-22659255 | None:intergenic | 40.0% | |
| GTTATGGGAACTCAGTAACA+AGG | + | chr2_1:22659313-22659332 | Msa0201330:CDS | 40.0% | |
| ! | TGATCGGCTCAATATAGTCT+CGG | + | chr2_1:22659487-22659506 | Msa0201330:CDS | 40.0% |
| GCTCGAATTATCATGGTTTG+AGG | + | chr2_1:22659529-22659548 | Msa0201330:CDS | 40.0% | |
| !! | TATGTCATTGATTTCGCAGG+AGG | + | chr2_1:22659618-22659637 | Msa0201330:intron | 40.0% |
| TCTTTCGTAAATAGTTCGCG+AGG | - | chr2_1:22659700-22659719 | None:intergenic | 40.0% | |
| GCAAACAGCGAATTCTTGTA+TGG | + | chr2_1:22659759-22659778 | Msa0201330:CDS | 40.0% | |
| GTGTTATCATTGTTTCCACC+TGG | - | chr2_1:22659835-22659854 | None:intergenic | 40.0% | |
| AAAGCAAATACGAGGAATGC+TGG | - | chr2_1:22659883-22659902 | None:intergenic | 40.0% | |
| AGTCGGATAAAGCAAATACG+AGG | - | chr2_1:22659891-22659910 | None:intergenic | 40.0% | |
| ATTTGCTTTATCCGACTCCA+TGG | + | chr2_1:22659894-22659913 | Msa0201330:CDS | 40.0% | |
| AGTCCGGATATCAACTTCAA+AGG | - | chr2_1:22660006-22660025 | None:intergenic | 40.0% | |
| !! | CGTGCTTTTGAGAAAGGGTT+AGG | - | chr2_1:22655479-22655498 | None:intergenic | 45.0% |
| CCTTGAGTCTCAACCAAAAG+TGG | - | chr2_1:22655637-22655656 | None:intergenic | 45.0% | |
| !! | CCACTTTTGGTTGAGACTCA+AGG | + | chr2_1:22655634-22655653 | Msa0201330:five_prime_UTR | 45.0% |
| TGACTGGTGTGTGACTTTGT+TGG | - | chr2_1:22655838-22655857 | None:intergenic | 45.0% | |
| GTAGAAACTAAGTGGAGGAG+AGG | - | chr2_1:22657076-22657095 | None:intergenic | 45.0% | |
| ! | TGGGTGTTTTCCGGCAAATA+CGG | - | chr2_1:22657416-22657435 | None:intergenic | 45.0% |
| ! | GTTGTTTCACACCACTACCT+GGG | - | chr2_1:22657435-22657454 | None:intergenic | 45.0% |
| GTGTTAAACTTGAAACGGGC+AGG | + | chr2_1:22657515-22657534 | Msa0201330:intron | 45.0% | |
| TAGACGCAGATTCGAATACG+CGG | - | chr2_1:22657714-22657733 | None:intergenic | 45.0% | |
| !! | GAAGGGGAACACATTGGTTT+AGG | - | chr2_1:22657954-22657973 | None:intergenic | 45.0% |
| CTTTGTGAAGGGGAACACAT+TGG | - | chr2_1:22657960-22657979 | None:intergenic | 45.0% | |
| AGACCAAGATCCAACATTGC+TGG | + | chr2_1:22658021-22658040 | Msa0201330:five_prime_UTR | 45.0% | |
| ATGGCAGAAACCAGCAATGT+TGG | - | chr2_1:22658034-22658053 | None:intergenic | 45.0% | |
| ! | TTGTGTTTTGCTGCAGCAGT+TGG | + | chr2_1:22658181-22658200 | Msa0201330:CDS | 45.0% |
| TTGTTGCCATCAATTAGGGG+TGG | + | chr2_1:22658244-22658263 | Msa0201330:CDS | 45.0% | |
| AAGCAAACAGTGAGATGGCA+TGG | + | chr2_1:22658302-22658321 | Msa0201330:CDS | 45.0% | |
| GTCCCGAGTTTATACAAGTG+AGG | - | chr2_1:22658384-22658403 | None:intergenic | 45.0% | |
| ! | GCTCGAAAACATTCGGTTTG+TGG | + | chr2_1:22658806-22658825 | Msa0201330:intron | 45.0% |
| CCATCATCTCTGAGTCATCT+AGG | - | chr2_1:22659199-22659218 | None:intergenic | 45.0% | |
| CCTAGATGACTCAGAGATGA+TGG | + | chr2_1:22659196-22659215 | Msa0201330:CDS | 45.0% | |
| ACGATTATCGCTGCAGAAGT+TGG | + | chr2_1:22659245-22659264 | Msa0201330:CDS | 45.0% | |
| ACTATATTGAGCCGATCAGG+CGG | - | chr2_1:22659485-22659504 | None:intergenic | 45.0% | |
| GAGACTATATTGAGCCGATC+AGG | - | chr2_1:22659488-22659507 | None:intergenic | 45.0% | |
| ! | GATCGGCTCAATATAGTCTC+GGG | + | chr2_1:22659488-22659507 | Msa0201330:CDS | 45.0% |
| GTTTCGACTCTCATAGCTAC+AGG | + | chr2_1:22659784-22659803 | Msa0201330:CDS | 45.0% | |
| ! | TCAGCTGCATTTAGCTTACC+AGG | + | chr2_1:22659814-22659833 | Msa0201330:CDS | 45.0% |
| TGAAGACGAGATAAGTGCCA+TGG | - | chr2_1:22659914-22659933 | None:intergenic | 45.0% | |
| CATCCTTATCTCGCGATATG+CGG | + | chr2_1:22659957-22659976 | Msa0201330:CDS | 45.0% | |
| !! | GAAGTTGATATCCGGACTAG+TGG | + | chr2_1:22660008-22660027 | Msa0201330:CDS | 45.0% |
| CACAAATAACGCCACTAGTC+CGG | - | chr2_1:22660022-22660041 | None:intergenic | 45.0% | |
| !! | AAGGCATTGCGCCTATTTCA+TGG | + | chr2_1:22660332-22660351 | Msa0201330:three_prime_UTR | 45.0% |
| !!! | TATATTTTGTTAAAATTAAA+TGG | + | chr2_1:22656221-22656240 | Msa0201330:intron | 5.0% |
| !! | TTTAAAAAAAATATGAAAAA+TGG | + | chr2_1:22656295-22656314 | Msa0201330:intron | 5.0% |
| !!! | AATAAATTTTATTGTTATTA+TGG | + | chr2_1:22660274-22660293 | Msa0201330:three_prime_UTR | 5.0% |
| ! | ACTCATGAGGATAGTGGTGG+TGG | - | chr2_1:22655861-22655880 | None:intergenic | 50.0% |
| ! | GTGACTCATGAGGATAGTGG+TGG | - | chr2_1:22655864-22655883 | None:intergenic | 50.0% |
| ! | TCTTTGATGGACAACACGGG+TGG | - | chr2_1:22656683-22656702 | None:intergenic | 50.0% |
| ! | GGGTGTTTTCCGGCAAATAC+GGG | - | chr2_1:22657415-22657434 | None:intergenic | 50.0% |
| GTATTTGCCGGAAAACACCC+AGG | + | chr2_1:22657415-22657434 | Msa0201330:intron | 50.0% | |
| ! | ACCACTACCTGGGTGTTTTC+CGG | - | chr2_1:22657425-22657444 | None:intergenic | 50.0% |
| ! | GGTTGTTTCACACCACTACC+TGG | - | chr2_1:22657436-22657455 | None:intergenic | 50.0% |
| ! | GGTTGCCCAGCCATTTGTTA+TGG | - | chr2_1:22658053-22658072 | None:intergenic | 50.0% |
| AACCGCACTCCATATTGCAG+CGG | + | chr2_1:22658069-22658088 | Msa0201330:five_prime_UTR | 50.0% | |
| ! | GATTTGCTCCCGCTGCAATA+TGG | - | chr2_1:22658081-22658100 | None:intergenic | 50.0% |
| CCTTGTCCACCCCTAATTGA+TGG | - | chr2_1:22658253-22658272 | None:intergenic | 50.0% | |
| CCATCAATTAGGGGTGGACA+AGG | + | chr2_1:22658250-22658269 | Msa0201330:CDS | 50.0% | |
| CGGAGGTGATAGCAATGAGA+CGG | + | chr2_1:22658769-22658788 | Msa0201330:intron | 50.0% | |
| GGAGGTGATAGCAATGAGAC+GGG | + | chr2_1:22658770-22658789 | Msa0201330:intron | 50.0% | |
| CAATGTTAGCACCGCCTGAT+CGG | + | chr2_1:22659471-22659490 | Msa0201330:CDS | 50.0% | |
| ! | GCTGCATTTAGCTTACCAGG+TGG | + | chr2_1:22659817-22659836 | Msa0201330:CDS | 50.0% |
| CGAGATAAGTGCCATGGAGT+CGG | - | chr2_1:22659908-22659927 | None:intergenic | 50.0% | |
| CGCATATCGCGAGATAAGGA+TGG | - | chr2_1:22659959-22659978 | None:intergenic | 50.0% | |
| !! | AGGATAGTGGTGGTGGTGAC+TGG | - | chr2_1:22655854-22655873 | None:intergenic | 55.0% |
| ! | TGATGGACAACACGGGTGGT+TGG | - | chr2_1:22656679-22656698 | None:intergenic | 55.0% |
| GGAGGAGAGGCTGTCTAAAC+TGG | - | chr2_1:22657063-22657082 | None:intergenic | 55.0% | |
| ACCGCACTCCATATTGCAGC+GGG | + | chr2_1:22658070-22658089 | Msa0201330:five_prime_UTR | 55.0% | |
| TCCCGCTGCAATATGGAGTG+CGG | - | chr2_1:22658074-22658093 | None:intergenic | 55.0% | |
| !! | GACGCACTTGCTTTTGCTCG+CGG | + | chr2_1:22658749-22658768 | Msa0201330:CDS | 55.0% |
| GCTCCGCATATCGCGAGATA+AGG | - | chr2_1:22659963-22659982 | None:intergenic | 55.0% | |
| GCCGGAAAACACCCAGGTAG+TGG | + | chr2_1:22657421-22657440 | Msa0201330:intron | 60.0% | |
| !! | GCACTTGCTTTTGCTCGCGG+AGG | + | chr2_1:22658752-22658771 | Msa0201330:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 22655465 | 22660391 | 22655465 | ID=Msa0201330;Name=Msa0201330 |
| chr2_1 | mRNA | 22655465 | 22660391 | 22655465 | ID=Msa0201330-mRNA-1;Parent=Msa0201330;Name=Msa0201330-mRNA-1;_AED=0.37;_eAED=0.37;_QI=509|0.8|0.83|1|0.6|0.5|6|140|452 |
| chr2_1 | exon | 22655465 | 22655682 | 22655465 | ID=Msa0201330-mRNA-1:exon:8941;Parent=Msa0201330-mRNA-1 |
| chr2_1 | exon | 22657027 | 22657063 | 22657027 | ID=Msa0201330-mRNA-1:exon:8942;Parent=Msa0201330-mRNA-1 |
| chr2_1 | exon | 22657879 | 22658409 | 22657879 | ID=Msa0201330-mRNA-1:exon:8943;Parent=Msa0201330-mRNA-1 |
| chr2_1 | exon | 22658720 | 22658773 | 22658720 | ID=Msa0201330-mRNA-1:exon:8944;Parent=Msa0201330-mRNA-1 |
| chr2_1 | exon | 22659138 | 22659550 | 22659138 | ID=Msa0201330-mRNA-1:exon:8945;Parent=Msa0201330-mRNA-1 |
| chr2_1 | exon | 22659637 | 22660391 | 22659637 | ID=Msa0201330-mRNA-1:exon:8946;Parent=Msa0201330-mRNA-1 |
| chr2_1 | five_prime_UTR | 22655465 | 22655682 | 22655465 | ID=Msa0201330-mRNA-1:five_prime_utr;Parent=Msa0201330-mRNA-1 |
| chr2_1 | five_prime_UTR | 22657027 | 22657063 | 22657027 | ID=Msa0201330-mRNA-1:five_prime_utr;Parent=Msa0201330-mRNA-1 |
| chr2_1 | five_prime_UTR | 22657879 | 22658132 | 22657879 | ID=Msa0201330-mRNA-1:five_prime_utr;Parent=Msa0201330-mRNA-1 |
| chr2_1 | CDS | 22658133 | 22658409 | 22658133 | ID=Msa0201330-mRNA-1:cds;Parent=Msa0201330-mRNA-1 |
| chr2_1 | CDS | 22658720 | 22658773 | 22658720 | ID=Msa0201330-mRNA-1:cds;Parent=Msa0201330-mRNA-1 |
| chr2_1 | CDS | 22659138 | 22659550 | 22659138 | ID=Msa0201330-mRNA-1:cds;Parent=Msa0201330-mRNA-1 |
| chr2_1 | CDS | 22659637 | 22660251 | 22659637 | ID=Msa0201330-mRNA-1:cds;Parent=Msa0201330-mRNA-1 |
| chr2_1 | three_prime_UTR | 22660252 | 22660391 | 22660252 | ID=Msa0201330-mRNA-1:three_prime_utr;Parent=Msa0201330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
