Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1303640 | sp|Q9C512|MNS1_ARATH | 68.206 | 563 | 162 | 3 | 1 | 562 | 1 | 547 | 0.0 | 778 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1303640 | G7JU96 | 97.432 | 584 | 14 | 1 | 1 | 583 | 1 | 584 | 0.0 | 1173 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0029020 | Msa1303640 | -0.808902 | 2.464531e-50 | -8.615850e-47 |
Msa0035110 | Msa1303640 | 0.805882 | 1.076979e-49 | -8.615850e-47 |
Msa0046310 | Msa1303640 | 0.805136 | 1.544238e-49 | -8.615850e-47 |
Msa0046820 | Msa1303640 | 0.813175 | 2.924158e-51 | -8.615850e-47 |
Msa0070740 | Msa1303640 | 0.841737 | 3.962304e-58 | -8.615850e-47 |
Msa0089150 | Msa1303640 | -0.803913 | 2.778696e-49 | -8.615850e-47 |
Msa0617560 | Msa1303640 | -0.807239 | 5.569490e-50 | -8.615850e-47 |
Msa0621890 | Msa1303640 | 0.811754 | 5.977115e-51 | -8.615850e-47 |
Msa0641020 | Msa1303640 | 0.800246 | 1.577181e-48 | -8.615850e-47 |
Msa0660880 | Msa1303640 | -0.806386 | 8.434106e-50 | -8.615850e-47 |
Msa0716740 | Msa1303640 | -0.808166 | 3.539939e-50 | -8.615850e-47 |
Msa0719490 | Msa1303640 | -0.826346 | 2.853055e-54 | -8.615850e-47 |
Msa0756480 | Msa1303640 | 0.821045 | 4.974350e-53 | -8.615850e-47 |
Msa0776030 | Msa1303640 | 0.802737 | 4.866905e-49 | -8.615850e-47 |
Msa0792170 | Msa1303640 | 0.814424 | 1.551495e-51 | -8.615850e-47 |
Msa0792510 | Msa1303640 | 0.801651 | 8.142089e-49 | -8.615850e-47 |
Msa0799290 | Msa1303640 | -0.804896 | 1.733620e-49 | -8.615850e-47 |
Msa0835510 | Msa1303640 | 0.837673 | 4.524162e-57 | -8.615850e-47 |
Msa0837510 | Msa1303640 | -0.804200 | 2.421641e-49 | -8.615850e-47 |
Msa0162050 | Msa1303640 | 0.805251 | 1.460857e-49 | -8.615850e-47 |
Msa0175920 | Msa1303640 | 0.804386 | 2.215017e-49 | -8.615850e-47 |
Msa1244300 | Msa1303640 | 0.822982 | 1.770277e-53 | -8.615850e-47 |
Msa1246040 | Msa1303640 | 0.815970 | 7.037560e-52 | -8.615850e-47 |
Msa1257870 | Msa1303640 | -0.801822 | 7.509884e-49 | -8.615850e-47 |
Msa1258950 | Msa1303640 | 0.800417 | 1.455422e-48 | -8.615850e-47 |
Msa1265660 | Msa1303640 | 0.973147 | 6.142309e-136 | -8.615850e-47 |
Msa1284140 | Msa1303640 | 0.800708 | 1.269617e-48 | -8.615850e-47 |
Msa1303570 | Msa1303640 | 0.982006 | 5.391530e-154 | -8.615850e-47 |
Msa1303640 | Msa1304850 | 0.800523 | 1.384792e-48 | -8.615850e-47 |
Msa1303640 | Msa1326000 | 0.816439 | 5.527407e-52 | -8.615850e-47 |
Msa1303640 | Msa1329990 | 0.817690 | 2.893668e-52 | -8.615850e-47 |
Msa1303640 | Msa1357380 | 0.802851 | 4.611695e-49 | -8.615850e-47 |
Msa1303640 | Msa1365120 | 0.833539 | 5.031804e-56 | -8.615850e-47 |
Msa1303640 | Msa1373950 | 0.819211 | 1.308604e-52 | -8.615850e-47 |
Msa1303640 | Msa1409520 | 0.819618 | 1.056705e-52 | -8.615850e-47 |
Msa0365360 | Msa1303640 | 0.809159 | 2.171699e-50 | -8.615850e-47 |
Msa0382200 | Msa1303640 | 0.816204 | 6.237942e-52 | -8.615850e-47 |
Msa0414070 | Msa1303640 | 0.811996 | 5.292605e-51 | -8.615850e-47 |
Msa0418000 | Msa1303640 | 0.816092 | 6.607895e-52 | -8.615850e-47 |
Msa0436900 | Msa1303640 | 0.972087 | 3.378974e-134 | -8.615850e-47 |
Msa0440110 | Msa1303640 | 0.806551 | 7.788087e-50 | -8.615850e-47 |
Msa0452680 | Msa1303640 | 0.818212 | 2.205806e-52 | -8.615850e-47 |
Msa0457370 | Msa1303640 | 0.840570 | 8.029845e-58 | -8.615850e-47 |
Msa0988500 | Msa1303640 | 0.814227 | 1.715039e-51 | -8.615850e-47 |
Msa0989490 | Msa1303640 | -0.828581 | 8.301482e-55 | -8.615850e-47 |
Msa1008340 | Msa1303640 | 0.809649 | 1.704683e-50 | -8.615850e-47 |
Msa1008490 | Msa1303640 | 0.821297 | 4.352066e-53 | -8.615850e-47 |
Msa1009020 | Msa1303640 | 0.810407 | 1.170478e-50 | -8.615850e-47 |
Msa1033440 | Msa1303640 | -0.801071 | 1.070165e-48 | -8.615850e-47 |
Msa1036390 | Msa1303640 | 0.815408 | 9.387114e-52 | -8.615850e-47 |
Msa1041770 | Msa1303640 | 0.805318 | 1.414242e-49 | -8.615850e-47 |
Msa1064420 | Msa1303640 | 0.835237 | 1.886158e-56 | -8.615850e-47 |
Msa1073110 | Msa1303640 | -0.816015 | 6.874652e-52 | -8.615850e-47 |
Msa1076470 | Msa1303640 | 0.820209 | 7.741323e-53 | -8.615850e-47 |
Msa1076680 | Msa1303640 | 0.817914 | 2.575850e-52 | -8.615850e-47 |
Msa1080280 | Msa1303640 | 0.803705 | 3.068140e-49 | -8.615850e-47 |
Msa1081600 | Msa1303640 | 0.825370 | 4.863801e-54 | -8.615850e-47 |
Msa1081700 | Msa1303640 | 0.821546 | 3.812184e-53 | -8.615850e-47 |
Msa1083410 | Msa1303640 | 0.845185 | 4.755734e-59 | -8.615850e-47 |
Msa0241580 | Msa1303640 | 0.812217 | 4.737772e-51 | -8.615850e-47 |
Msa0243910 | Msa1303640 | 0.807972 | 3.892131e-50 | -8.615850e-47 |
Msa0265930 | Msa1303640 | -0.808872 | 2.501210e-50 | -8.615850e-47 |
Msa0269360 | Msa1303640 | 0.812242 | 4.677436e-51 | -8.615850e-47 |
Msa0279490 | Msa1303640 | 0.803821 | 2.903300e-49 | -8.615850e-47 |
Msa0303860 | Msa1303640 | -0.801534 | 8.603659e-49 | -8.615850e-47 |
Msa0304740 | Msa1303640 | 0.800637 | 1.312400e-48 | -8.615850e-47 |
Msa0313990 | Msa1303640 | 0.802856 | 4.600863e-49 | -8.615850e-47 |
Msa0331590 | Msa1303640 | 0.813372 | 2.647012e-51 | -8.615850e-47 |
Msa0345010 | Msa1303640 | 0.804782 | 1.830793e-49 | -8.615850e-47 |
Msa1125040 | Msa1303640 | 0.806712 | 7.200379e-50 | -8.615850e-47 |
Msa1128160 | Msa1303640 | 0.830944 | 2.207122e-55 | -8.615850e-47 |
Msa1139240 | Msa1303640 | 0.819383 | 1.195269e-52 | -8.615850e-47 |
Msa1151960 | Msa1303640 | 0.813478 | 2.508366e-51 | -8.615850e-47 |
Msa1165360 | Msa1303640 | 0.829732 | 4.366276e-55 | -8.615850e-47 |
Msa1166370 | Msa1303640 | 0.835590 | 1.535535e-56 | -8.615850e-47 |
Msa1188420 | Msa1303640 | 0.814336 | 1.622892e-51 | -8.615850e-47 |
Msa1201990 | Msa1303640 | 0.801380 | 9.255172e-49 | -8.615850e-47 |
Msa1208070 | Msa1303640 | 0.804423 | 2.175403e-49 | -8.615850e-47 |
Msa1208760 | Msa1303640 | 0.821193 | 4.599549e-53 | -8.615850e-47 |
Msa1220710 | Msa1303640 | 0.981206 | 4.980102e-152 | -8.615850e-47 |
Msa1224400 | Msa1303640 | 0.801203 | 1.005958e-48 | -8.615850e-47 |
Msa0482870 | Msa1303640 | 0.806160 | 9.414688e-50 | -8.615850e-47 |
Msa0504630 | Msa1303640 | 0.803821 | 2.903130e-49 | -8.615850e-47 |
Msa0524050 | Msa1303640 | 0.800326 | 1.519097e-48 | -8.615850e-47 |
Msa0563140 | Msa1303640 | 0.817963 | 2.509986e-52 | -8.615850e-47 |
Msa0575770 | Msa1303640 | 0.800914 | 1.152328e-48 | -8.615850e-47 |
Msa0576400 | Msa1303640 | -0.831069 | 2.056922e-55 | -8.615850e-47 |
Msa0583930 | Msa1303640 | 0.805240 | 1.468973e-49 | -8.615850e-47 |
Msa0591780 | Msa1303640 | 0.804433 | 2.164907e-49 | -8.615850e-47 |
Msa0847390 | Msa1303640 | 0.808510 | 2.989900e-50 | -8.615850e-47 |
Msa0880080 | Msa1303640 | 0.801965 | 7.018417e-49 | -8.615850e-47 |
Msa0902980 | Msa1303640 | 0.803248 | 3.816205e-49 | -8.615850e-47 |
Msa0921630 | Msa1303640 | 0.822117 | 2.811666e-53 | -8.615850e-47 |
Msa0929400 | Msa1303640 | 0.835530 | 1.590440e-56 | -8.615850e-47 |
Msa0946120 | Msa1303640 | 0.800099 | 1.689065e-48 | -8.615850e-47 |
Msa0951720 | Msa1303640 | 0.831787 | 1.369311e-55 | -8.615850e-47 |
Msa0960270 | Msa1303640 | 0.806514 | 7.929028e-50 | -8.615850e-47 |
Msa0968320 | Msa1303640 | -0.814069 | 1.858656e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1303640 | MtrunA17_Chr0c31g0494131 | 97.309 | 446 | 11 | 1 | 139 | 583 | 5 | 450 | 0.0 | 898 |
Msa1303640 | MtrunA17_Chr4g0071731 | 95.360 | 431 | 20 | 0 | 1 | 431 | 1 | 431 | 0.0 | 824 |
Msa1303640 | MtrunA17_Chr4g0002301 | 70.018 | 567 | 162 | 2 | 14 | 579 | 16 | 575 | 0.0 | 809 |
Msa1303640 | MtrunA17_Chr4g0071721 | 80.597 | 201 | 8 | 2 | 414 | 583 | 2 | 202 | 9.84e-110 | 328 |
Msa1303640 | MtrunA17_Chr2g0286021 | 40.769 | 520 | 247 | 12 | 87 | 551 | 114 | 627 | 1.89e-107 | 337 |
Msa1303640 | MtrunA17_Chr0c31g0494141 | 93.525 | 139 | 9 | 0 | 1 | 139 | 1 | 139 | 4.49e-82 | 255 |
Msa1303640 | MtrunA17_Chr1g0187981 | 33.260 | 457 | 263 | 12 | 112 | 549 | 46 | 479 | 8.31e-57 | 202 |
Msa1303640 | MtrunA17_Chr4g0059431 | 31.042 | 480 | 266 | 12 | 115 | 553 | 39 | 494 | 5.27e-50 | 183 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1303640 | AT1G51590.1 | 68.206 | 563 | 162 | 3 | 1 | 562 | 1 | 547 | 0.0 | 778 |
Msa1303640 | AT3G21160.1 | 67.621 | 559 | 163 | 5 | 1 | 557 | 1 | 543 | 0.0 | 759 |
Msa1303640 | AT1G51590.2 | 77.201 | 443 | 100 | 1 | 121 | 562 | 1 | 443 | 0.0 | 716 |
Msa1303640 | AT3G21160.2 | 62.796 | 422 | 139 | 5 | 1 | 420 | 1 | 406 | 2.80e-180 | 517 |
Msa1303640 | AT1G30000.1 | 42.515 | 501 | 230 | 13 | 107 | 551 | 122 | 620 | 2.63e-109 | 342 |
Msa1303640 | AT1G30000.2 | 42.515 | 501 | 230 | 13 | 107 | 551 | 142 | 640 | 7.21e-109 | 342 |
Msa1303640 | AT5G43710.2 | 32.495 | 477 | 253 | 12 | 112 | 556 | 39 | 478 | 4.03e-59 | 207 |
Msa1303640 | AT5G43710.3 | 32.495 | 477 | 253 | 12 | 112 | 556 | 39 | 478 | 4.59e-59 | 207 |
Msa1303640 | AT5G43710.1 | 32.495 | 477 | 253 | 12 | 112 | 556 | 39 | 478 | 1.26e-58 | 208 |
Msa1303640 | AT1G27520.1 | 30.277 | 469 | 276 | 8 | 112 | 553 | 36 | 480 | 4.04e-53 | 192 |
Find 167 sgRNAs with CRISPR-Local
Find 587 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTGACACATTATTTATTA+TGG | 0.113974 | 8_3:+66823847 | Msa1303640:CDS |
GCCAAGTTAATTCTGTTATA+AGG | 0.158612 | 8_3:-66824330 | None:intergenic |
GTTTCTGTGTTCCACGATTT+TGG | 0.162111 | 8_3:-66821470 | None:intergenic |
AACAGTGACTCTATTGTTTC+AGG | 0.197851 | 8_3:-66828321 | None:intergenic |
CCTCTAGTAACAATTCTTAA+AGG | 0.202090 | 8_3:-66828934 | None:intergenic |
TTCCTGGTACTTGGGATCTT+TGG | 0.204373 | 8_3:-66825075 | None:intergenic |
ACTCTATTGTTTCAGGTCTT+TGG | 0.212857 | 8_3:-66828314 | None:intergenic |
TGCTCCTGGAATGCTGGCTT+TGG | 0.225418 | 8_3:+66827165 | Msa1303640:CDS |
AACAGTATTCTTGCAGATTC+TGG | 0.226211 | 8_3:+66825014 | Msa1303640:CDS |
GATATAAAAGGAAATATAAA+AGG | 0.238603 | 8_3:+66821960 | Msa1303640:CDS |
GGTTTGTGGATTAATATATA+TGG | 0.239402 | 8_3:-66825431 | None:intergenic |
CTTGACACATTATTTATTAT+GGG | 0.267883 | 8_3:+66823848 | Msa1303640:CDS |
TCTCTTCGTTCTAAGCTAAT+AGG | 0.273035 | 8_3:-66822068 | None:intergenic |
CTCAAATATCCAGGACATAT+TGG | 0.279811 | 8_3:+66829101 | Msa1303640:intron |
ATGCTGGTGATCCACCATTT+TGG | 0.280093 | 8_3:+66829155 | Msa1303640:CDS |
ATATTCACTATTCAGAGTTT+TGG | 0.280484 | 8_3:+66824200 | Msa1303640:intron |
ACCATGCAAGAGAGATTAAA+AGG | 0.301448 | 8_3:-66821756 | None:intergenic |
ATGCTGGCTTTGGGATCTTC+TGG | 0.305734 | 8_3:+66827175 | Msa1303640:CDS |
GATCCCAAAGCCAGCATTCC+AGG | 0.308436 | 8_3:-66827169 | None:intergenic |
CCAAGTTAATTCTGTTATAA+GGG | 0.318957 | 8_3:-66824329 | None:intergenic |
ATCATACATGGGTGCAAAAC+GGG | 0.324243 | 8_3:-66821554 | None:intergenic |
AACAGAATTAACTTGGCTTC+TGG | 0.327325 | 8_3:+66824336 | Msa1303640:CDS |
ATTTCCAGAGCATTGATATC+AGG | 0.332015 | 8_3:-66829525 | None:intergenic |
AAATGTTCCAACCCCATTCT+TGG | 0.341145 | 8_3:-66828377 | None:intergenic |
CCGTTATCTCTCTTGATGAA+TGG | 0.341390 | 8_3:+66828890 | Msa1303640:CDS |
ATGACTGGTGTCGACAGTTT+TGG | 0.346593 | 8_3:+66823797 | Msa1303640:CDS |
GCTCCTGGAATGCTGGCTTT+GGG | 0.348292 | 8_3:+66827166 | Msa1303640:CDS |
GCGACCTTGTTCTTTAAATT+CGG | 0.349669 | 8_3:-66821503 | None:intergenic |
AATGAGAAATGCAAATCGTT+TGG | 0.350406 | 8_3:-66821731 | None:intergenic |
AAGAACTCTCGCACTGAAAC+AGG | 0.362549 | 8_3:+66828414 | Msa1303640:CDS |
CCCTTATAACAGAATTAACT+TGG | 0.366768 | 8_3:+66824329 | Msa1303640:CDS |
TTGCAGCTGGAAGATATAAA+AGG | 0.369064 | 8_3:+66821948 | Msa1303640:intron |
TGCTCCAGCTGATTTAGTTC+CGG | 0.370229 | 8_3:-66825452 | None:intergenic |
CAACAAGGGTGTTTCTGTTC+CGG | 0.371148 | 8_3:+66822016 | Msa1303640:CDS |
CAGATAGGCTGCTGCCTGCT+TGG | 0.379481 | 8_3:+66824289 | Msa1303640:CDS |
CGTTATCTCTCTTGATGAAT+GGG | 0.383426 | 8_3:+66828891 | Msa1303640:CDS |
GCTGATTTAGTTCCGGTTTG+TGG | 0.386745 | 8_3:-66825445 | None:intergenic |
AGTCTTGTTTCCTTGTACCC+AGG | 0.387901 | 8_3:-66826183 | None:intergenic |
CTAATTTAGTTGGCGTTGAC+TGG | 0.393306 | 8_3:-66828156 | None:intergenic |
GGATCTTCTGGCTACGGTCC+TGG | 0.396255 | 8_3:+66827187 | Msa1303640:CDS |
ATGAGTATCTGCTCAAGGCC+TGG | 0.404357 | 8_3:+66826165 | Msa1303640:CDS |
TCCTCCTCCTCCTCGTCGTC+CGG | 0.405142 | 8_3:-66822035 | None:intergenic |
CCTGCTTGGAATACACCTTC+AGG | 0.407242 | 8_3:+66824303 | Msa1303640:CDS |
TCTGCAAGAACAAACCAAAA+TGG | 0.410311 | 8_3:-66829169 | None:intergenic |
TTGCACCACGTTTCTGTAAG+TGG | 0.415938 | 8_3:-66829415 | None:intergenic |
CATTTGGTGCTATGGGTGAT+AGG | 0.416762 | 8_3:+66825479 | Msa1303640:CDS |
TTCTCCCCTGCTAATTTAGT+TGG | 0.417626 | 8_3:-66828166 | None:intergenic |
CTGCTCAAGGCCTGGGTACA+AGG | 0.419634 | 8_3:+66826173 | Msa1303640:CDS |
ATGAGAAATGCAAATCGTTT+GGG | 0.424493 | 8_3:-66821730 | None:intergenic |
GAAACAAAACATACCAAGAA+TGG | 0.427386 | 8_3:+66828364 | Msa1303640:CDS |
GTTTGTGGATTAATATATAT+GGG | 0.430268 | 8_3:-66825430 | None:intergenic |
AGCAATTACATTTGGTGCTA+TGG | 0.433891 | 8_3:+66825471 | Msa1303640:CDS |
AAACAAAACATACCAAGAAT+GGG | 0.437023 | 8_3:+66828365 | Msa1303640:CDS |
TCAGCTGGAGCAATTACATT+TGG | 0.437942 | 8_3:+66825463 | Msa1303640:CDS |
TCCACCTGATATCAATGCTC+TGG | 0.440075 | 8_3:+66829521 | Msa1303640:three_prime_UTR |
GAGTGAATTTCCAAGTTTCT+CGG | 0.441167 | 8_3:-66827030 | None:intergenic |
CTCTAGTAACAATTCTTAAA+GGG | 0.443237 | 8_3:-66828933 | None:intergenic |
CTGGGGCAAGGATGAACTTA+AGG | 0.448721 | 8_3:+66822142 | Msa1303640:CDS |
ACAATACAATGTGGAGGAGT+TGG | 0.449632 | 8_3:-66821616 | None:intergenic |
TTAATCTGAAAATATCTTGT+TGG | 0.452393 | 8_3:-66821813 | None:intergenic |
AATGTTTATTCAGGGAAATG+TGG | 0.462518 | 8_3:+66826940 | Msa1303640:intron |
GACATACCCGTGTCCACTTA+GGG | 0.465196 | 8_3:-66824371 | None:intergenic |
GGACGACGAGGAGGAGGAGG+AGG | 0.468160 | 8_3:+66822037 | Msa1303640:CDS |
AAAATTCCTCATCATTTGCA+TGG | 0.470161 | 8_3:+66828991 | Msa1303640:CDS |
CAAGAGATAGAGGTACTTGA+GGG | 0.474098 | 8_3:-66828854 | None:intergenic |
AGACATACCCGTGTCCACTT+AGG | 0.474251 | 8_3:-66824372 | None:intergenic |
CAATACAATGTGGAGGAGTT+GGG | 0.475982 | 8_3:-66821615 | None:intergenic |
AATCATACATGGGTGCAAAA+CGG | 0.478756 | 8_3:-66821555 | None:intergenic |
TGAGTATCTGCTCAAGGCCT+GGG | 0.480151 | 8_3:+66826166 | Msa1303640:CDS |
AGAGGTTTCAATATCTACAT+AGG | 0.482455 | 8_3:-66829334 | None:intergenic |
TCAACGCCAACTAAATTAGC+AGG | 0.487625 | 8_3:+66828160 | Msa1303640:CDS |
TTGAATACCCAGGTGAATAC+AGG | 0.489245 | 8_3:+66828790 | Msa1303640:intron |
CTGTCGACACCAGTCATTGA+TGG | 0.490270 | 8_3:-66823791 | None:intergenic |
CTTAGTGCTTACGATCTCTC+TGG | 0.491199 | 8_3:+66824231 | Msa1303640:CDS |
CGCACTGAAACAGGATATGT+TGG | 0.492372 | 8_3:+66828423 | Msa1303640:CDS |
TCTCGAACACACTAACTTCG+AGG | 0.497782 | 8_3:-66824022 | None:intergenic |
TTAATTTCTTCTATAAGAGA+AGG | 0.498217 | 8_3:-66821588 | None:intergenic |
GTTACTAGAGGTTCTCATGA+AGG | 0.499412 | 8_3:+66828946 | Msa1303640:CDS |
CTATTACTTCCGCAAGGATG+AGG | 0.499434 | 8_3:+66828189 | Msa1303640:CDS |
ATGTTTATTCAGGGAAATGT+GGG | 0.503666 | 8_3:+66826941 | Msa1303640:intron |
GTGTACATATCCGAGAAACT+TGG | 0.507480 | 8_3:+66827020 | Msa1303640:CDS |
AGGCTAGAGATCTTGCAGAT+AGG | 0.508179 | 8_3:+66824274 | Msa1303640:CDS |
AGATCCCAAGTACCAGGAAA+AGG | 0.510321 | 8_3:+66825079 | Msa1303640:CDS |
CGATGAAGTCTTCCTCGAAA+AGG | 0.511645 | 8_3:+66824254 | Msa1303640:CDS |
ATATATATTAATCCACAAAC+CGG | 0.515848 | 8_3:+66825433 | Msa1303640:CDS |
TAATTGTAGGATATGAATGT+TGG | 0.516103 | 8_3:+66828276 | Msa1303640:intron |
TTACCCACATAACTTCAGAT+TGG | 0.518694 | 8_3:-66829242 | None:intergenic |
ATGGGAAGCAACCCATCCTC+AGG | 0.518755 | 8_3:-66825412 | None:intergenic |
CTGTAGTAGTAGGATAAATG+TGG | 0.522732 | 8_3:+66829300 | Msa1303640:three_prime_UTR |
CCATTCATCAAGAGAGATAA+CGG | 0.522901 | 8_3:-66828890 | None:intergenic |
GCTTTGGGATCTTCTGGCTA+CGG | 0.523447 | 8_3:+66827181 | Msa1303640:CDS |
TCTGATATTTCAGGCTGAGA+AGG | 0.525967 | 8_3:+66825363 | Msa1303640:intron |
AATTAAAATTGTAAGTAGAG+AGG | 0.527065 | 8_3:-66829352 | None:intergenic |
ATATAAAAGGAAATATAAAA+GGG | 0.529356 | 8_3:+66821961 | Msa1303640:CDS |
TGTTCCGGACGACGAGGAGG+AGG | 0.530832 | 8_3:+66822031 | Msa1303640:CDS |
TCCGGACGACGAGGAGGAGG+AGG | 0.532748 | 8_3:+66822034 | Msa1303640:CDS |
CATTTGCATGGGAGAAAAGA+AGG | 0.532775 | 8_3:+66829003 | Msa1303640:CDS |
TGGAGAAGATGACAAATGTA+TGG | 0.533256 | 8_3:+66827207 | Msa1303640:CDS |
ATCTAATTGTGCAGCTTGCA+TGG | 0.533784 | 8_3:+66828116 | Msa1303640:intron |
ATATGAATGTTGGTACCTCA+TGG | 0.534315 | 8_3:+66828286 | Msa1303640:CDS |
TAGAGTCACTGTTCTACCTC+TGG | 0.535116 | 8_3:+66828331 | Msa1303640:CDS |
GCCTCCAATCTGAAGTTATG+TGG | 0.535623 | 8_3:+66829238 | Msa1303640:CDS |
CCCACATAACTTCAGATTGG+AGG | 0.535645 | 8_3:-66829239 | None:intergenic |
ATACATTTGTCATCTTCTCC+AGG | 0.537996 | 8_3:-66827205 | None:intergenic |
GTTCGTTCCTTCCAAAATCG+TGG | 0.539368 | 8_3:+66821459 | Msa1303640:five_prime_UTR |
CTTAAGTTCATCCTTGCCCC+AGG | 0.541162 | 8_3:-66822141 | None:intergenic |
AAACATACCAAGAATGGGGT+TGG | 0.542683 | 8_3:+66828370 | Msa1303640:CDS |
AACCAAAGATCCCAAGTACC+AGG | 0.544930 | 8_3:+66825073 | Msa1303640:CDS |
TAATTTCTTCTATAAGAGAA+GGG | 0.549461 | 8_3:-66821587 | None:intergenic |
TCCAGAGCATTGATATCAGG+TGG | 0.550696 | 8_3:-66829522 | None:intergenic |
ATGCTCCATCACCATGCAGT+TGG | 0.554764 | 8_3:+66829205 | Msa1303640:CDS |
AAATTCCTCATCATTTGCAT+GGG | 0.557737 | 8_3:+66828992 | Msa1303640:CDS |
ACAAACCAACTGCATGGTGA+TGG | 0.557966 | 8_3:-66829210 | None:intergenic |
GGTGTATAATCAATCATACA+TGG | 0.559186 | 8_3:-66821566 | None:intergenic |
CCTGAAGGTGTATTCCAAGC+AGG | 0.559595 | 8_3:-66824303 | None:intergenic |
CAAACCGGAACTAAATCAGC+TGG | 0.560172 | 8_3:+66825448 | Msa1303640:CDS |
ATGTATGGCTCTTGCAGAGG+AGG | 0.560745 | 8_3:+66827222 | Msa1303640:CDS |
GCAATTACATTTGGTGCTAT+GGG | 0.561010 | 8_3:+66825472 | Msa1303640:CDS |
AGCATGCAAGATCGTGGCAA+CGG | 0.568581 | 8_3:-66829137 | None:intergenic |
TTTCTCCCATGCAAATGATG+AGG | 0.570393 | 8_3:-66828997 | None:intergenic |
TCACAGCCACCATCAATGAC+TGG | 0.575019 | 8_3:+66823782 | Msa1303640:intron |
GTGTGTTCGAGACAACCATA+AGG | 0.575938 | 8_3:+66824033 | Msa1303640:CDS |
ACAAGGAAACAAGACTGAAA+CGG | 0.578209 | 8_3:+66826190 | Msa1303640:CDS |
CAGATAACCCTAAGTGGACA+CGG | 0.579397 | 8_3:+66824364 | Msa1303640:CDS |
ACAAGAGATAGAGGTACTTG+AGG | 0.580231 | 8_3:-66828855 | None:intergenic |
CTGTTATAAGGGATTCCTGA+AGG | 0.586630 | 8_3:-66824318 | None:intergenic |
GTTGCCACGATCTTGCATGC+TGG | 0.587220 | 8_3:+66829139 | Msa1303640:CDS |
GCAATACAGATAACCCTAAG+TGG | 0.592749 | 8_3:+66824358 | Msa1303640:CDS |
TGTAGTAGTAGGATAAATGT+GGG | 0.598665 | 8_3:+66829301 | Msa1303640:three_prime_UTR |
CCTCCAATCTGAAGTTATGT+GGG | 0.607547 | 8_3:+66829239 | Msa1303640:CDS |
CTTCTATGAGTATCTGCTCA+AGG | 0.608647 | 8_3:+66826160 | Msa1303640:CDS |
AAGATGCTATGCTTCATGCA+TGG | 0.609708 | 8_3:+66822099 | Msa1303640:CDS |
CCATGCAGTTGGTTTGTCTG+TGG | 0.609886 | 8_3:+66829216 | Msa1303640:CDS |
CAACGCCAACTAAATTAGCA+GGG | 0.612032 | 8_3:+66828161 | Msa1303640:CDS |
CCTTTAAGAATTGTTACTAG+AGG | 0.612319 | 8_3:+66828934 | Msa1303640:CDS |
GCAAGAACAAACCAAAATGG+TGG | 0.618888 | 8_3:-66829166 | None:intergenic |
CAAATGTATGGCTCTTGCAG+AGG | 0.621239 | 8_3:+66827219 | Msa1303640:CDS |
ATGTGGGAGACATCAATGAA+AGG | 0.624770 | 8_3:+66826957 | Msa1303640:CDS |
ATAGAACGAGGTGAAAATTG+TGG | 0.625204 | 8_3:-66821423 | None:intergenic |
TGGAAATTCACTCATTGACA+AGG | 0.627108 | 8_3:+66827040 | Msa1303640:CDS |
GGTACTTGAGGGTTTCTGCA+AGG | 0.627307 | 8_3:-66828843 | None:intergenic |
TCATACATGGGTGCAAAACG+GGG | 0.628851 | 8_3:-66821553 | None:intergenic |
GTGGTGAAAACAAGAGATAG+AGG | 0.634123 | 8_3:-66828864 | None:intergenic |
TTTGGTTTGTTCTTGCAGAG+GGG | 0.638703 | 8_3:+66829173 | Msa1303640:CDS |
AACTCCGAATTTAAAGAACA+AGG | 0.645866 | 8_3:+66821499 | Msa1303640:five_prime_UTR |
ATCACCAGCATGCAAGATCG+TGG | 0.646419 | 8_3:-66829143 | None:intergenic |
TTCTGTTCCGGACGACGAGG+AGG | 0.650266 | 8_3:+66822028 | Msa1303640:CDS |
GTGTATAATCAATCATACAT+GGG | 0.651632 | 8_3:-66821565 | None:intergenic |
CCACAGACAAACCAACTGCA+TGG | 0.654490 | 8_3:-66829216 | None:intergenic |
TCATCAAGAGAGATAACGGA+AGG | 0.655792 | 8_3:-66828886 | None:intergenic |
TCAAGAGAGATAACGGAAGG+TGG | 0.658007 | 8_3:-66828883 | None:intergenic |
AGGTCTTTGGATATTCCATG+AGG | 0.659685 | 8_3:-66828301 | None:intergenic |
AGATCCAAACCTCATCCTTG+CGG | 0.664502 | 8_3:-66828198 | None:intergenic |
TGTTTCTGGTGAAACGCCAG+AGG | 0.665323 | 8_3:-66828347 | None:intergenic |
GGAGAACTATTACTTCCGCA+AGG | 0.667520 | 8_3:+66828183 | Msa1303640:CDS |
TGTTTCTGTTCCGGACGACG+AGG | 0.667914 | 8_3:+66822025 | Msa1303640:CDS |
AACAAAACATACCAAGAATG+GGG | 0.668187 | 8_3:+66828366 | Msa1303640:CDS |
ATCGTGGAACACAGAAACAG+AGG | 0.668319 | 8_3:+66821475 | Msa1303640:five_prime_UTR |
GATATGTACACAAAAGATGA+CGG | 0.669140 | 8_3:-66827008 | None:intergenic |
AGATAACCCTAAGTGGACAC+GGG | 0.678800 | 8_3:+66824365 | Msa1303640:CDS |
AACGCCAACTAAATTAGCAG+GGG | 0.680021 | 8_3:+66828162 | Msa1303640:CDS |
GTTACTACAATACAATGTGG+AGG | 0.683905 | 8_3:-66821622 | None:intergenic |
TATGTTACTACAATACAATG+TGG | 0.690835 | 8_3:-66821625 | None:intergenic |
GGAAAGAAGTAACAAGTGTG+AGG | 0.708169 | 8_3:-66821532 | None:intergenic |
TCGACACCAGTCATTGATGG+TGG | 0.722882 | 8_3:-66823788 | None:intergenic |
AACGAACGAACGATAGAACG+AGG | 0.725796 | 8_3:-66821435 | None:intergenic |
ACTGACCACTTACAGAAACG+TGG | 0.740449 | 8_3:+66829410 | Msa1303640:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATAAAAGGAAATATAAAA+GGG | + | chr8_3:66821961-66821980 | Msa1303640:CDS | 10.0% |
!! | TTATATGTATATATATGTTA+TGG | + | chr8_3:66827090-66827109 | Msa1303640:intron | 10.0% |
!!! | TATTTATTAGTTTTTTTCTA+AGG | + | chr8_3:66827989-66828008 | Msa1303640:intron | 10.0% |
!!! | TCACTTTTTTTTTTTTTTTG+TGG | + | chr8_3:66821904-66821923 | Msa1303640:intron | 15.0% |
!!! | CACTTTTTTTTTTTTTTTGT+GGG | + | chr8_3:66821905-66821924 | Msa1303640:intron | 15.0% |
!! | GATATAAAAGGAAATATAAA+AGG | + | chr8_3:66821960-66821979 | Msa1303640:CDS | 15.0% |
!! | TAAACAAAATACAAAACAAA+TGG | - | chr8_3:66822175-66822194 | None:intergenic | 15.0% |
!!! | TTTTTATAGATAGATTATAG+CGG | + | chr8_3:66822264-66822283 | Msa1303640:intron | 15.0% |
!!! | TAGTTATTTTATGTTTTACA+GGG | + | chr8_3:66822816-66822835 | Msa1303640:intron | 15.0% |
!!! | TTGAGTTGATTAATTAATTT+TGG | - | chr8_3:66825980-66825999 | None:intergenic | 15.0% |
!! | TAATTTCTTCTATAAGAGAA+GGG | - | chr8_3:66821590-66821609 | None:intergenic | 20.0% |
!! | TTAATTTCTTCTATAAGAGA+AGG | - | chr8_3:66821591-66821610 | None:intergenic | 20.0% |
!!! | ATTGTAGTAACATACATTTT+CGG | + | chr8_3:66821634-66821653 | Msa1303640:five_prime_UTR | 20.0% |
!! | TTAATCTGAAAATATCTTGT+TGG | - | chr8_3:66821816-66821835 | None:intergenic | 20.0% |
!!! | TATTTTCAGATTAAAACAAG+AGG | + | chr8_3:66821822-66821841 | Msa1303640:CDS | 20.0% |
!! | AATTGATGAAAAAATCAACA+AGG | + | chr8_3:66822001-66822020 | Msa1303640:CDS | 20.0% |
!! | ATTGATGAAAAAATCAACAA+GGG | + | chr8_3:66822002-66822021 | Msa1303640:CDS | 20.0% |
!!! | CTATGTTTGTTAAAAAATAG+CGG | + | chr8_3:66822315-66822334 | Msa1303640:intron | 20.0% |
!! | AGTAGCTTATAAATATGAAA+TGG | + | chr8_3:66822444-66822463 | Msa1303640:intron | 20.0% |
!!! | AAGACATAAATTTGAGTTTA+TGG | - | chr8_3:66822680-66822699 | None:intergenic | 20.0% |
!!! | GTAGTTATTTTATGTTTTAC+AGG | + | chr8_3:66822815-66822834 | Msa1303640:intron | 20.0% |
!! | TCTTGACACATTATTTATTA+TGG | + | chr8_3:66823847-66823866 | Msa1303640:CDS | 20.0% |
!! | CTTGACACATTATTTATTAT+GGG | + | chr8_3:66823848-66823867 | Msa1303640:CDS | 20.0% |
!! | TATTATATCAGATGCTTTAA+GGG | - | chr8_3:66823959-66823978 | None:intergenic | 20.0% |
!! | TTATTATATCAGATGCTTTA+AGG | - | chr8_3:66823960-66823979 | None:intergenic | 20.0% |
!! | AGTGAATATAACCAAAATAA+TGG | - | chr8_3:66824189-66824208 | None:intergenic | 20.0% |
!! | TTAATACGATTACTATGATA+GGG | - | chr8_3:66824760-66824779 | None:intergenic | 20.0% |
!!! | GTTTGTGGATTAATATATAT+GGG | - | chr8_3:66825433-66825452 | None:intergenic | 20.0% |
!! | ATATATATTAATCCACAAAC+CGG | + | chr8_3:66825433-66825452 | Msa1303640:CDS | 20.0% |
!!! | ACAAAATATGTGATTTTCAA+AGG | - | chr8_3:66826254-66826273 | None:intergenic | 20.0% |
!! | AATACATGCTATTGAAATTT+GGG | - | chr8_3:66826793-66826812 | None:intergenic | 20.0% |
!! | AAATACATGCTATTGAAATT+TGG | - | chr8_3:66826794-66826813 | None:intergenic | 20.0% |
!!! | AATAGCATGTATTTTTTGTT+TGG | + | chr8_3:66826800-66826819 | Msa1303640:intron | 20.0% |
!! | CATCAATCAACTATAAATTA+TGG | - | chr8_3:66827603-66827622 | None:intergenic | 20.0% |
!! | CATAATTTATAGTTGATTGA+TGG | + | chr8_3:66827601-66827620 | Msa1303640:intron | 20.0% |
!! | TTAAATTCAAGCAAAAATTC+TGG | - | chr8_3:66827800-66827819 | None:intergenic | 20.0% |
!! | AAACAAAACCAATAAATTTC+AGG | - | chr8_3:66828056-66828075 | None:intergenic | 20.0% |
!!! | TTCATAGATTCATTTTTTGT+TGG | + | chr8_3:66828682-66828701 | Msa1303640:intron | 20.0% |
!! | CTTATGCATTATAAAGATTA+TGG | + | chr8_3:66828721-66828740 | Msa1303640:intron | 20.0% |
!!! | GAATACTTAGAAGATTTTTT+TGG | + | chr8_3:66829274-66829293 | Msa1303640:three_prime_UTR | 20.0% |
!! | AATTAAAATTGTAAGTAGAG+AGG | - | chr8_3:66829355-66829374 | None:intergenic | 20.0% |
!!! | AATTTGCCCAATTTTTTAAA+TGG | - | chr8_3:66829483-66829502 | None:intergenic | 20.0% |
! | GTGTATAATCAATCATACAT+GGG | - | chr8_3:66821568-66821587 | None:intergenic | 25.0% |
! | TATGTTACTACAATACAATG+TGG | - | chr8_3:66821628-66821647 | None:intergenic | 25.0% |
! | ATCTTATGAAAAATATGCCT+GGG | + | chr8_3:66822124-66822143 | Msa1303640:CDS | 25.0% |
! | ACTCTACAAATTCAATAAGT+TGG | - | chr8_3:66822404-66822423 | None:intergenic | 25.0% |
! | CTTATTGAATTTGTAGAGTT+CGG | + | chr8_3:66822405-66822424 | Msa1303640:intron | 25.0% |
! | AAAAAATCAATTACGATTGC+AGG | + | chr8_3:66822494-66822513 | Msa1303640:intron | 25.0% |
! | AAAAATCAATTACGATTGCA+GGG | + | chr8_3:66822495-66822514 | Msa1303640:intron | 25.0% |
!! | TTATTTTCATGAGCTTCTAA+TGG | - | chr8_3:66822578-66822597 | None:intergenic | 25.0% |
! | AAGTTAGTAACTAATTGCTA+AGG | + | chr8_3:66822840-66822859 | Msa1303640:intron | 25.0% |
!!! | GATTTTAATCGTGAATTTGT+AGG | + | chr8_3:66823067-66823086 | Msa1303640:intron | 25.0% |
! | AACAATATGAGTCATAATCA+GGG | - | chr8_3:66823167-66823186 | None:intergenic | 25.0% |
! | TAACAATATGAGTCATAATC+AGG | - | chr8_3:66823168-66823187 | None:intergenic | 25.0% |
! | TTTATGCAAATATTCAGAGT+AGG | + | chr8_3:66823649-66823668 | Msa1303640:intron | 25.0% |
! | ATAGAGCAAACTATTTACAA+GGG | - | chr8_3:66823687-66823706 | None:intergenic | 25.0% |
! | AATAGAGCAAACTATTTACA+AGG | - | chr8_3:66823688-66823707 | None:intergenic | 25.0% |
!! | TCTGATATAATAAGTATTGC+AGG | + | chr8_3:66823967-66823986 | Msa1303640:intron | 25.0% |
!! | ATATTCACTATTCAGAGTTT+TGG | + | chr8_3:66824200-66824219 | Msa1303640:intron | 25.0% |
!! | TATTCACTATTCAGAGTTTT+GGG | + | chr8_3:66824201-66824220 | Msa1303640:intron | 25.0% |
! | CCAAGTTAATTCTGTTATAA+GGG | - | chr8_3:66824332-66824351 | None:intergenic | 25.0% |
!! | AAACAGTGCTTTTATATGTA+CGG | - | chr8_3:66824439-66824458 | None:intergenic | 25.0% |
!!! | TATTTTCAAGGACTTAAACA+TGG | + | chr8_3:66824490-66824509 | Msa1303640:intron | 25.0% |
!! | TAATCTTTGTTTGATCATGT+TGG | + | chr8_3:66824529-66824548 | Msa1303640:intron | 25.0% |
! | GTTAATACGATTACTATGAT+AGG | - | chr8_3:66824761-66824780 | None:intergenic | 25.0% |
!! | TTAACATCCAATATTTCTGT+TGG | + | chr8_3:66824781-66824800 | Msa1303640:intron | 25.0% |
!! | TAACATCCAATATTTCTGTT+GGG | + | chr8_3:66824782-66824801 | Msa1303640:intron | 25.0% |
!! | CCAGAAGTATATAAATATTC+TGG | - | chr8_3:66825132-66825151 | None:intergenic | 25.0% |
! | CCAGAATATTTATATACTTC+TGG | + | chr8_3:66825129-66825148 | Msa1303640:intron | 25.0% |
!! | TATTCCTTATGCAAATTTTG+AGG | + | chr8_3:66825331-66825350 | Msa1303640:intron | 25.0% |
!! | GGTTTGTGGATTAATATATA+TGG | - | chr8_3:66825434-66825453 | None:intergenic | 25.0% |
! | ATATCTTCCAAATTCCAAAA+TGG | - | chr8_3:66825656-66825675 | None:intergenic | 25.0% |
! | TTAATGTTTAGTGATTGCAA+AGG | + | chr8_3:66825809-66825828 | Msa1303640:intron | 25.0% |
!! | ACATTTTTGTATGAAGAAGA+TGG | + | chr8_3:66825944-66825963 | Msa1303640:intron | 25.0% |
!! | CATTTTTGTATGAAGAAGAT+GGG | + | chr8_3:66825945-66825964 | Msa1303640:intron | 25.0% |
!!! | AATTGTTGTTTTCTGTTGAA+TGG | + | chr8_3:66826002-66826021 | Msa1303640:intron | 25.0% |
! | TCATTCTTCACGTAATTTAA+AGG | + | chr8_3:66826117-66826136 | Msa1303640:intron | 25.0% |
! | CATAAATCAAAATATGTCCA+TGG | - | chr8_3:66826351-66826370 | None:intergenic | 25.0% |
! | AATTAAACAGAGACAACTTT+GGG | - | chr8_3:66826414-66826433 | None:intergenic | 25.0% |
! | AAATTAAACAGAGACAACTT+TGG | - | chr8_3:66826415-66826434 | None:intergenic | 25.0% |
!!! | ATCAACCATTATTTCTAAGA+TGG | + | chr8_3:66826588-66826607 | Msa1303640:intron | 25.0% |
! | TGATACCATCTTAGAAATAA+TGG | - | chr8_3:66826596-66826615 | None:intergenic | 25.0% |
! | CTTGATAAGAGTTTATAAAG+AGG | + | chr8_3:66826728-66826747 | Msa1303640:intron | 25.0% |
! | AAAGCAATGCACAAAAAAAA+AGG | - | chr8_3:66826854-66826873 | None:intergenic | 25.0% |
! | TGCGATAAAATGTTTATTCA+GGG | + | chr8_3:66826932-66826951 | Msa1303640:intron | 25.0% |
! | TCAATTTGTCTACAAAACTT+CGG | + | chr8_3:66827281-66827300 | Msa1303640:intron | 25.0% |
! | TTGACGAAATATAATACCAA+AGG | + | chr8_3:66827470-66827489 | Msa1303640:intron | 25.0% |
! | TTAAATATGCAAACAACTTG+AGG | - | chr8_3:66827654-66827673 | None:intergenic | 25.0% |
! | AATTTGTGCCTGAAATTTAT+TGG | + | chr8_3:66828045-66828064 | Msa1303640:intron | 25.0% |
! | GCTAAGGTAAATATAATTGT+AGG | + | chr8_3:66828263-66828282 | Msa1303640:intron | 25.0% |
! | TAATTGTAGGATATGAATGT+TGG | + | chr8_3:66828276-66828295 | Msa1303640:intron | 25.0% |
! | AAACAAAACATACCAAGAAT+GGG | + | chr8_3:66828365-66828384 | Msa1303640:CDS | 25.0% |
!! | TCTAAGAAAGCAAATCATTT+TGG | - | chr8_3:66828492-66828511 | None:intergenic | 25.0% |
! | TTATCAACTATTCACATTTG+TGG | + | chr8_3:66828532-66828551 | Msa1303640:intron | 25.0% |
!!! | TTCATTTTTTGTTGGTTATG+AGG | + | chr8_3:66828690-66828709 | Msa1303640:intron | 25.0% |
! | CTCTAGTAACAATTCTTAAA+GGG | - | chr8_3:66828936-66828955 | None:intergenic | 25.0% |
! | AATTGATTACAAGTAGTTCA+GGG | + | chr8_3:66829029-66829048 | Msa1303640:intron | 25.0% |
!!! | TCTGAAACTTTTAGATTTTC+AGG | + | chr8_3:66829452-66829471 | Msa1303640:three_prime_UTR | 25.0% |
! | GCTCTTCCATTTAAAAAATT+GGG | + | chr8_3:66829474-66829493 | Msa1303640:three_prime_UTR | 25.0% |
AACTCCGAATTTAAAGAACA+AGG | + | chr8_3:66821499-66821518 | Msa1303640:five_prime_UTR | 30.0% | |
GGTGTATAATCAATCATACA+TGG | - | chr8_3:66821569-66821588 | None:intergenic | 30.0% | |
! | AGTAACATACATTTTCGGAA+TGG | + | chr8_3:66821639-66821658 | Msa1303640:exon | 30.0% |
ATGAGAAATGCAAATCGTTT+GGG | - | chr8_3:66821733-66821752 | None:intergenic | 30.0% | |
AATGAGAAATGCAAATCGTT+TGG | - | chr8_3:66821734-66821753 | None:intergenic | 30.0% | |
!!! | ATCTTACAGTTTTTTGCAAG+CGG | - | chr8_3:66821852-66821871 | None:intergenic | 30.0% |
CATCTTATGAAAAATATGCC+TGG | + | chr8_3:66822123-66822142 | Msa1303640:CDS | 30.0% | |
TCTTATGAAAAATATGCCTG+GGG | + | chr8_3:66822125-66822144 | Msa1303640:CDS | 30.0% | |
AAAATCAATTACGATTGCAG+GGG | + | chr8_3:66822496-66822515 | Msa1303640:intron | 30.0% | |
AATCAGTTAATCACACATCT+TGG | - | chr8_3:66822973-66822992 | None:intergenic | 30.0% | |
AGATGTGTGATTAACTGATT+AGG | + | chr8_3:66822973-66822992 | Msa1303640:intron | 30.0% | |
GATGTGTGATTAACTGATTA+GGG | + | chr8_3:66822974-66822993 | Msa1303640:intron | 30.0% | |
ATGTGTGATTAACTGATTAG+GGG | + | chr8_3:66822975-66822994 | Msa1303640:intron | 30.0% | |
! | TGAATTTGTAGGCTTTTCAA+TGG | + | chr8_3:66823078-66823097 | Msa1303640:intron | 30.0% |
! | GAATTTGTAGGCTTTTCAAT+GGG | + | chr8_3:66823079-66823098 | Msa1303640:intron | 30.0% |
! | CTGATTTAAAGCAATGTTTC+AGG | - | chr8_3:66823435-66823454 | None:intergenic | 30.0% |
! | CTGAAACATTGCTTTAAATC+AGG | + | chr8_3:66823433-66823452 | Msa1303640:intron | 30.0% |
AGGTATGTATTACCATACAA+GGG | + | chr8_3:66823495-66823514 | Msa1303640:intron | 30.0% | |
TAGAGCAAACTATTTACAAG+GGG | - | chr8_3:66823686-66823705 | None:intergenic | 30.0% | |
AGGAACATGTAGATAATTAG+TGG | - | chr8_3:66823761-66823780 | None:intergenic | 30.0% | |
! | GATATAATAAGTATTGCAGG+TGG | + | chr8_3:66823970-66823989 | Msa1303640:intron | 30.0% |
AACCATAAGGTTGAATTAGA+AGG | + | chr8_3:66824046-66824065 | Msa1303640:intron | 30.0% | |
AACCTTCTAATTCAACCTTA+TGG | - | chr8_3:66824051-66824070 | None:intergenic | 30.0% | |
TAAGCAACATATGCTGAAAT+TGG | - | chr8_3:66824130-66824149 | None:intergenic | 30.0% | |
AATGGACAGATAAGTGAAAA+TGG | - | chr8_3:66824171-66824190 | None:intergenic | 30.0% | |
! | CACTTATCTGTCCATTATTT+TGG | + | chr8_3:66824175-66824194 | Msa1303640:intron | 30.0% |
CCCTTATAACAGAATTAACT+TGG | + | chr8_3:66824329-66824348 | Msa1303640:CDS | 30.0% | |
GCCAAGTTAATTCTGTTATA+AGG | - | chr8_3:66824333-66824352 | None:intergenic | 30.0% | |
!! | ATATGTACGGAATTAGCTTT+CGG | - | chr8_3:66824426-66824445 | None:intergenic | 30.0% |
CTTGAAAATAGAACACAGTT+TGG | - | chr8_3:66824480-66824499 | None:intergenic | 30.0% | |
! | CAAACTGTGTTCTATTTTCA+AGG | + | chr8_3:66824478-66824497 | Msa1303640:intron | 30.0% |
TTTACCATACATGGGTATTA+TGG | - | chr8_3:66824660-66824679 | None:intergenic | 30.0% | |
!!! | GTTTGGTTTTTACCATACAT+GGG | - | chr8_3:66824668-66824687 | None:intergenic | 30.0% |
TACTTGGTTAAGTGTTTAAG+TGG | - | chr8_3:66824690-66824709 | None:intergenic | 30.0% | |
ATAGGGACTTGAGTATTATA+GGG | - | chr8_3:66824743-66824762 | None:intergenic | 30.0% | |
TACAAACCCAACAGAAATAT+TGG | - | chr8_3:66824791-66824810 | None:intergenic | 30.0% | |
!! | ATAATTTGTTCTCCGATACT+AGG | + | chr8_3:66824989-66825008 | Msa1303640:intron | 30.0% |
!! | TAATTTGTTCTCCGATACTA+GGG | + | chr8_3:66824990-66825009 | Msa1303640:intron | 30.0% |
! | TTCTGGAAATTCATCATAAG+TGG | - | chr8_3:66825115-66825134 | None:intergenic | 30.0% |
TTCTTGAAATCAGTACACTT+GGG | - | chr8_3:66825228-66825247 | None:intergenic | 30.0% | |
ATTCTTGAAATCAGTACACT+TGG | - | chr8_3:66825229-66825248 | None:intergenic | 30.0% | |
AGTACCTCAAAATTTGCATA+AGG | - | chr8_3:66825338-66825357 | None:intergenic | 30.0% | |
!!! | TTATGCAAATTTTGAGGTAC+TGG | + | chr8_3:66825337-66825356 | Msa1303640:intron | 30.0% |
TGATGTTATCTTACAGTTGT+TGG | + | chr8_3:66825545-66825564 | Msa1303640:intron | 30.0% | |
GTTAACCAACTTAACCAAAA+TGG | - | chr8_3:66825571-66825590 | None:intergenic | 30.0% | |
! | AACTTATTGACAAGCCATTT+TGG | + | chr8_3:66825639-66825658 | Msa1303640:intron | 30.0% |
!! | CACATTGTTTTATTCCTCAA+TGG | - | chr8_3:66825696-66825715 | None:intergenic | 30.0% |
AGAAATTGTCAAGAAGTCTA+CGG | - | chr8_3:66826090-66826109 | None:intergenic | 30.0% | |
!! | CATATTTTGTTGTCTCTGTA+TGG | + | chr8_3:66826264-66826283 | Msa1303640:intron | 30.0% |
GAAAGAAGCCAAAGTATATA+TGG | + | chr8_3:66826370-66826389 | Msa1303640:intron | 30.0% | |
AGAAATGTTAGTCAAATGTC+AGG | - | chr8_3:66826478-66826497 | None:intergenic | 30.0% | |
TGATACCATCTTAAAAATCG+TGG | + | chr8_3:66826516-66826535 | Msa1303640:intron | 30.0% | |
GATAAGAGTTTATAAAGAGG+AGG | + | chr8_3:66826731-66826750 | Msa1303640:intron | 30.0% | |
TTGCTATGGAAGTTTAAACT+TGG | + | chr8_3:66826872-66826891 | Msa1303640:intron | 30.0% | |
GGAAGTTTAAACTTGGAAAT+AGG | + | chr8_3:66826879-66826898 | Msa1303640:intron | 30.0% | |
ATCGCACATTTAAATACACA+GGG | - | chr8_3:66826918-66826937 | None:intergenic | 30.0% | |
TATCGCACATTTAAATACAC+AGG | - | chr8_3:66826919-66826938 | None:intergenic | 30.0% | |
GTGCGATAAAATGTTTATTC+AGG | + | chr8_3:66826931-66826950 | Msa1303640:intron | 30.0% | |
AATGTTTATTCAGGGAAATG+TGG | + | chr8_3:66826940-66826959 | Msa1303640:intron | 30.0% | |
ATGTTTATTCAGGGAAATGT+GGG | + | chr8_3:66826941-66826960 | Msa1303640:intron | 30.0% | |
GATATGTACACAAAAGATGA+CGG | - | chr8_3:66827011-66827030 | None:intergenic | 30.0% | |
!! | ACTCATTGACAAGGTATTTT+TGG | + | chr8_3:66827049-66827068 | Msa1303640:intron | 30.0% |
!!! | TTGACAAGGTATTTTTGGAA+AGG | + | chr8_3:66827054-66827073 | Msa1303640:intron | 30.0% |
!!! | GATCTTGTCTCTTTTTTAGA+TGG | + | chr8_3:66827126-66827145 | Msa1303640:intron | 30.0% |
CAATTTGTCTACAAAACTTC+GGG | + | chr8_3:66827282-66827301 | Msa1303640:intron | 30.0% | |
ATTTCGTCAACAAAAAAGCA+AGG | - | chr8_3:66827460-66827479 | None:intergenic | 30.0% | |
! | GTTTAGGATAATTGATCCTT+TGG | - | chr8_3:66827489-66827508 | None:intergenic | 30.0% |
AATTGTGGTTCCAATTTGTA+GGG | - | chr8_3:66827847-66827866 | None:intergenic | 30.0% | |
!!! | CTGTTTTGAAATCAGAATTG+TGG | - | chr8_3:66827862-66827881 | None:intergenic | 30.0% |
CTCAAACTTCTACTGAATTA+TGG | + | chr8_3:66828090-66828109 | Msa1303640:intron | 30.0% | |
!!! | TTCTTGGTATGTTTTGTTTC+TGG | - | chr8_3:66828364-66828383 | None:intergenic | 30.0% |
GAAACAAAACATACCAAGAA+TGG | + | chr8_3:66828364-66828383 | Msa1303640:CDS | 30.0% | |
AACAAAACATACCAAGAATG+GGG | + | chr8_3:66828366-66828385 | Msa1303640:CDS | 30.0% | |
!! | ATTTTGGAGAAAAAAGCGAA+GGG | - | chr8_3:66828476-66828495 | None:intergenic | 30.0% |
!! | ATGATTTGCTTTCTTAGACT+TGG | + | chr8_3:66828494-66828513 | Msa1303640:intron | 30.0% |
ATGTTCTATTGAGAACAGAT+TGG | + | chr8_3:66828658-66828677 | Msa1303640:intron | 30.0% | |
TGTTCTATTGAGAACAGATT+GGG | + | chr8_3:66828659-66828678 | Msa1303640:intron | 30.0% | |
CCTCTAGTAACAATTCTTAA+AGG | - | chr8_3:66828937-66828956 | None:intergenic | 30.0% | |
! | CCTTTAAGAATTGTTACTAG+AGG | + | chr8_3:66828934-66828953 | Msa1303640:CDS | 30.0% |
!!! | GATGAGGAATTTTTTCATCT+GGG | - | chr8_3:66828984-66829003 | None:intergenic | 30.0% |
!!! | TGATGAGGAATTTTTTCATC+TGG | - | chr8_3:66828985-66829004 | None:intergenic | 30.0% |
AAAATTCCTCATCATTTGCA+TGG | + | chr8_3:66828991-66829010 | Msa1303640:CDS | 30.0% | |
AAATTCCTCATCATTTGCAT+GGG | + | chr8_3:66828992-66829011 | Msa1303640:CDS | 30.0% | |
GAATTGATTACAAGTAGTTC+AGG | + | chr8_3:66829028-66829047 | Msa1303640:intron | 30.0% | |
!!! | TTTTTGGTTTCTGTAGTAGT+AGG | + | chr8_3:66829290-66829309 | Msa1303640:three_prime_UTR | 30.0% |
TGTAGTAGTAGGATAAATGT+GGG | + | chr8_3:66829301-66829320 | Msa1303640:three_prime_UTR | 30.0% | |
AGAGGTTTCAATATCTACAT+AGG | - | chr8_3:66829337-66829356 | None:intergenic | 30.0% | |
GGCTCTTCCATTTAAAAAAT+TGG | + | chr8_3:66829473-66829492 | Msa1303640:three_prime_UTR | 30.0% | |
ATAGAACGAGGTGAAAATTG+TGG | - | chr8_3:66821426-66821445 | None:intergenic | 35.0% | |
GCGACCTTGTTCTTTAAATT+CGG | - | chr8_3:66821506-66821525 | None:intergenic | 35.0% | |
AATCATACATGGGTGCAAAA+CGG | - | chr8_3:66821558-66821577 | None:intergenic | 35.0% | |
GTTACTACAATACAATGTGG+AGG | - | chr8_3:66821625-66821644 | None:intergenic | 35.0% | |
! | TCCTTTTAATCTCTCTTGCA+TGG | + | chr8_3:66821755-66821774 | Msa1303640:CDS | 35.0% |
ACCATGCAAGAGAGATTAAA+AGG | - | chr8_3:66821759-66821778 | None:intergenic | 35.0% | |
!!! | TCTTACAGTTTTTTGCAAGC+GGG | - | chr8_3:66821851-66821870 | None:intergenic | 35.0% |
!! | GTGTTATTTGAAATTGCAGC+TGG | + | chr8_3:66821935-66821954 | Msa1303640:intron | 35.0% |
TTGCAGCTGGAAGATATAAA+AGG | + | chr8_3:66821948-66821967 | Msa1303640:intron | 35.0% | |
! | TCTCTTCGTTCTAAGCTAAT+AGG | - | chr8_3:66822071-66822090 | None:intergenic | 35.0% |
!! | ATTATAGCGGTTAGTTTGCT+AGG | + | chr8_3:66822277-66822296 | Msa1303640:intron | 35.0% |
!! | TTATAGCGGTTAGTTTGCTA+GGG | + | chr8_3:66822278-66822297 | Msa1303640:intron | 35.0% |
TTGCTAGGGGAGATATAATT+TGG | + | chr8_3:66822292-66822311 | Msa1303640:intron | 35.0% | |
! | GCTGATAAGTTAGCTTATAG+CGG | + | chr8_3:66822341-66822360 | Msa1303640:intron | 35.0% |
ATAAGCTCGTGTAAACATGA+CGG | + | chr8_3:66822601-66822620 | Msa1303640:intron | 35.0% | |
!! | ACCCAAATTTGTTAGCACAA+GGG | + | chr8_3:66822709-66822728 | Msa1303640:intron | 35.0% |
TCCCTTGTGCTAACAAATTT+GGG | - | chr8_3:66822713-66822732 | None:intergenic | 35.0% | |
ATCCCTTGTGCTAACAAATT+TGG | - | chr8_3:66822714-66822733 | None:intergenic | 35.0% | |
AACTACAATATTGTCCCCAA+AGG | - | chr8_3:66822801-66822820 | None:intergenic | 35.0% | |
TGTGTGATTAACTGATTAGG+GGG | + | chr8_3:66822976-66822995 | Msa1303640:intron | 35.0% | |
GTTACAATTGTGACCAGTAA+AGG | + | chr8_3:66823033-66823052 | Msa1303640:intron | 35.0% | |
!! | GGGTTTTGACATTTTCTTGA+GGG | - | chr8_3:66823147-66823166 | None:intergenic | 35.0% |
!! | AGGGTTTTGACATTTTCTTG+AGG | - | chr8_3:66823148-66823167 | None:intergenic | 35.0% |
! | GTGACTCTTATTTAAACGAG+TGG | + | chr8_3:66823257-66823276 | Msa1303640:intron | 35.0% |
! | TCTTATTTAAACGAGTGGTG+TGG | + | chr8_3:66823262-66823281 | Msa1303640:intron | 35.0% |
! | GATGGTGCAATTTTATTGCA+GGG | - | chr8_3:66823325-66823344 | None:intergenic | 35.0% |
! | GTAATACATACCTCTTTTCC+GGG | - | chr8_3:66823488-66823507 | None:intergenic | 35.0% |
! | GGTAATACATACCTCTTTTC+CGG | - | chr8_3:66823489-66823508 | None:intergenic | 35.0% |
GAGGTATGTATTACCATACA+AGG | + | chr8_3:66823494-66823513 | Msa1303640:intron | 35.0% | |
! | CTCTTTTGAATTGGGTATCA+AGG | - | chr8_3:66823874-66823893 | None:intergenic | 35.0% |
!!! | CTCTCTAGCTCTTTTGAATT+GGG | - | chr8_3:66823882-66823901 | None:intergenic | 35.0% |
!!! | ACTCTCTAGCTCTTTTGAAT+TGG | - | chr8_3:66823883-66823902 | None:intergenic | 35.0% |
AGTTCCAGTTTCTGTATTGT+AGG | + | chr8_3:66823926-66823945 | Msa1303640:intron | 35.0% | |
! | AACAGAATTAACTTGGCTTC+TGG | + | chr8_3:66824336-66824355 | Msa1303640:CDS | 35.0% |
AGTAACTGAAGAATGTAGTG+AGG | - | chr8_3:66824401-66824420 | None:intergenic | 35.0% | |
!!! | TTTTCAAGTGCTACTCAATG+TGG | + | chr8_3:66824565-66824584 | Msa1303640:intron | 35.0% |
! | TTTCAAGTGCTACTCAATGT+GGG | + | chr8_3:66824566-66824585 | Msa1303640:intron | 35.0% |
! | ATTGAGAAGTCTGGGATATT+TGG | - | chr8_3:66824621-66824640 | None:intergenic | 35.0% |
AATCTCTCATTGAGAAGTCT+GGG | - | chr8_3:66824629-66824648 | None:intergenic | 35.0% | |
AAATCTCTCATTGAGAAGTC+TGG | - | chr8_3:66824630-66824649 | None:intergenic | 35.0% | |
AGACTTCTCAATGAGAGATT+TGG | + | chr8_3:66824629-66824648 | Msa1303640:intron | 35.0% | |
GACTTCTCAATGAGAGATTT+GGG | + | chr8_3:66824630-66824649 | Msa1303640:intron | 35.0% | |
!!! | GGTTTGGTTTTTACCATACA+TGG | - | chr8_3:66824669-66824688 | None:intergenic | 35.0% |
GGTTAAGTGTTTAAGTGGTT+TGG | - | chr8_3:66824685-66824704 | None:intergenic | 35.0% | |
GATAGGGACTTGAGTATTAT+AGG | - | chr8_3:66824744-66824763 | None:intergenic | 35.0% | |
GATGCAGATAGTTGCAAATA+AGG | - | chr8_3:66824884-66824903 | None:intergenic | 35.0% | |
CATTGCTAGAGTAGTCTATA+AGG | + | chr8_3:66824922-66824941 | Msa1303640:intron | 35.0% | |
! | AATTTGTTCTCCGATACTAG+GGG | + | chr8_3:66824991-66825010 | Msa1303640:intron | 35.0% |
AACAGTATTCTTGCAGATTC+TGG | + | chr8_3:66825014-66825033 | Msa1303640:CDS | 35.0% | |
! | ATTACCTTTTCCTGGTACTT+GGG | - | chr8_3:66825086-66825105 | None:intergenic | 35.0% |
TCTTGAAATCAGTACACTTG+GGG | - | chr8_3:66825227-66825246 | None:intergenic | 35.0% | |
!! | TACTGATTTCAAGAATGCTG+TGG | + | chr8_3:66825233-66825252 | Msa1303640:intron | 35.0% |
! | GTAAAAGTTTTCCTGAGGAT+GGG | + | chr8_3:66825401-66825420 | Msa1303640:CDS | 35.0% |
!! | AGCAATTACATTTGGTGCTA+TGG | + | chr8_3:66825471-66825490 | Msa1303640:CDS | 35.0% |
!! | GCAATTACATTTGGTGCTAT+GGG | + | chr8_3:66825472-66825491 | Msa1303640:CDS | 35.0% |
!!! | TGACAAGCCATTTTGGAATT+TGG | + | chr8_3:66825646-66825665 | Msa1303640:intron | 35.0% |
ACTTTCAACATATGCATGCA+TGG | - | chr8_3:66825901-66825920 | None:intergenic | 35.0% | |
ACAAGGAAACAAGACTGAAA+CGG | + | chr8_3:66826190-66826209 | Msa1303640:CDS | 35.0% | |
! | CTGAAACGGTAAAGTTTTAC+AGG | + | chr8_3:66826204-66826223 | Msa1303640:CDS | 35.0% |
! | ACGGTAAAGTTTTACAGGTA+AGG | + | chr8_3:66826209-66826228 | Msa1303640:intron | 35.0% |
! | TGTGATTTTCAAAGGACAGT+AGG | - | chr8_3:66826246-66826265 | None:intergenic | 35.0% |
TCTGTATGGTAAGAAGTTAC+CGG | + | chr8_3:66826278-66826297 | Msa1303640:intron | 35.0% | |
AAGGACGACCATATATACTT+TGG | - | chr8_3:66826381-66826400 | None:intergenic | 35.0% | |
ACCATCTTAAAAATCGTGGT+TGG | + | chr8_3:66826520-66826539 | Msa1303640:intron | 35.0% | |
CCATCTTAAAAATCGTGGTT+GGG | + | chr8_3:66826521-66826540 | Msa1303640:intron | 35.0% | |
CTAACACAAGCTCACAAAAT+CGG | - | chr8_3:66826567-66826586 | None:intergenic | 35.0% | |
CCAGATGATTGTCACATATT+TGG | - | chr8_3:66826827-66826846 | None:intergenic | 35.0% | |
CCAAATATGTGACAATCATC+TGG | + | chr8_3:66826824-66826843 | Msa1303640:intron | 35.0% | |
! | TTTTGTGCATTGCTTTGCTA+TGG | + | chr8_3:66826858-66826877 | Msa1303640:intron | 35.0% |
GAGTGAATTTCCAAGTTTCT+CGG | - | chr8_3:66827033-66827052 | None:intergenic | 35.0% | |
TGGAAATTCACTCATTGACA+AGG | + | chr8_3:66827040-66827059 | Msa1303640:CDS | 35.0% | |
ATACATTTGTCATCTTCTCC+AGG | - | chr8_3:66827208-66827227 | None:intergenic | 35.0% | |
TGGAGAAGATGACAAATGTA+TGG | + | chr8_3:66827207-66827226 | Msa1303640:CDS | 35.0% | |
TTACCTTTACCTCATTCATG+TGG | - | chr8_3:66827367-66827386 | None:intergenic | 35.0% | |
AGGTAAAGGTAAGAAACCTT+CGG | + | chr8_3:66827375-66827394 | Msa1303640:intron | 35.0% | |
AACAAAAAAGCAAGGTCACT+TGG | - | chr8_3:66827452-66827471 | None:intergenic | 35.0% | |
GGGACATATATTGAATGCAA+GGG | + | chr8_3:66827695-66827714 | Msa1303640:intron | 35.0% | |
GAATTGTGGTTCCAATTTGT+AGG | - | chr8_3:66827848-66827867 | None:intergenic | 35.0% | |
TGACTGGTAAAAATTGTAGC+AGG | - | chr8_3:66828143-66828162 | None:intergenic | 35.0% | |
TTTAAAGAACTGCGTGAGAA+TGG | - | chr8_3:66828225-66828244 | None:intergenic | 35.0% | |
ATATGAATGTTGGTACCTCA+TGG | + | chr8_3:66828286-66828305 | Msa1303640:CDS | 35.0% | |
! | ACTCTATTGTTTCAGGTCTT+TGG | - | chr8_3:66828317-66828336 | None:intergenic | 35.0% |
AACAGTGACTCTATTGTTTC+AGG | - | chr8_3:66828324-66828343 | None:intergenic | 35.0% | |
! | GAGAGTTCTTTTCAAATGCT+TGG | - | chr8_3:66828404-66828423 | None:intergenic | 35.0% |
!! | CATTTTGGAGAAAAAAGCGA+AGG | - | chr8_3:66828477-66828496 | None:intergenic | 35.0% |
CCAAAATGTGCTAATGATCT+CGG | + | chr8_3:66828585-66828604 | Msa1303640:intron | 35.0% | |
TGTAATGCACAAGTTACAGT+TGG | - | chr8_3:66828751-66828770 | None:intergenic | 35.0% | |
TAAACCATTGTTGAATACCC+AGG | + | chr8_3:66828780-66828799 | Msa1303640:intron | 35.0% | |
CCATTCATCAAGAGAGATAA+CGG | - | chr8_3:66828893-66828912 | None:intergenic | 35.0% | |
CGTTATCTCTCTTGATGAAT+GGG | + | chr8_3:66828891-66828910 | Msa1303640:CDS | 35.0% | |
! | TTCCCTTTTCTCAAATATCC+AGG | + | chr8_3:66829092-66829111 | Msa1303640:intron | 35.0% |
GTCCTGGATATTTGAGAAAA+GGG | - | chr8_3:66829097-66829116 | None:intergenic | 35.0% | |
TGTCCTGGATATTTGAGAAA+AGG | - | chr8_3:66829098-66829117 | None:intergenic | 35.0% | |
CTCAAATATCCAGGACATAT+TGG | + | chr8_3:66829101-66829120 | Msa1303640:intron | 35.0% | |
TCTGCAAGAACAAACCAAAA+TGG | - | chr8_3:66829172-66829191 | None:intergenic | 35.0% | |
!!! | ATTTTGGTTTGTTCTTGCAG+AGG | + | chr8_3:66829171-66829190 | Msa1303640:CDS | 35.0% |
!!! | TTTTGGTTTGTTCTTGCAGA+GGG | + | chr8_3:66829172-66829191 | Msa1303640:CDS | 35.0% |
TTACCCACATAACTTCAGAT+TGG | - | chr8_3:66829245-66829264 | None:intergenic | 35.0% | |
CTGTAGTAGTAGGATAAATG+TGG | + | chr8_3:66829300-66829319 | Msa1303640:three_prime_UTR | 35.0% | |
! | GTTTCTGTGTTCCACGATTT+TGG | - | chr8_3:66821473-66821492 | None:intergenic | 40.0% |
GGAAAGAAGTAACAAGTGTG+AGG | - | chr8_3:66821535-66821554 | None:intergenic | 40.0% | |
ATCATACATGGGTGCAAAAC+GGG | - | chr8_3:66821557-66821576 | None:intergenic | 40.0% | |
CAATACAATGTGGAGGAGTT+GGG | - | chr8_3:66821618-66821637 | None:intergenic | 40.0% | |
ACAATACAATGTGGAGGAGT+TGG | - | chr8_3:66821619-66821638 | None:intergenic | 40.0% | |
! | GGTCTTTTTGCGTAATAACG+AGG | - | chr8_3:66821712-66821731 | None:intergenic | 40.0% |
AAGATGCTATGCTTCATGCA+TGG | + | chr8_3:66822099-66822118 | Msa1303640:CDS | 40.0% | |
!! | TATAGCGGTTAGTTTGCTAG+GGG | + | chr8_3:66822279-66822298 | Msa1303640:intron | 40.0% |
! | AGCTAGCTTATAGCTGATCA+TGG | + | chr8_3:66822374-66822393 | Msa1303640:intron | 40.0% |
!! | GACCCAAATTTGTTAGCACA+AGG | + | chr8_3:66822708-66822727 | Msa1303640:intron | 40.0% |
! | TGCACAGTTGCTCTTTTATC+TGG | + | chr8_3:66822934-66822953 | Msa1303640:intron | 40.0% |
TCAGCGATCAAAACCTTTAC+TGG | - | chr8_3:66823049-66823068 | None:intergenic | 40.0% | |
! | GGAAAGTTCTAGTTGGGAAA+AGG | - | chr8_3:66823110-66823129 | None:intergenic | 40.0% |
! | TTGACATTTTCTTGAGGGAC+AGG | - | chr8_3:66823142-66823161 | None:intergenic | 40.0% |
! | GGATGGTGCAATTTTATTGC+AGG | - | chr8_3:66823326-66823345 | None:intergenic | 40.0% |
CCAACCTACAATACAGAAAC+TGG | - | chr8_3:66823933-66823952 | None:intergenic | 40.0% | |
CCAGTTTCTGTATTGTAGGT+TGG | + | chr8_3:66823930-66823949 | Msa1303640:intron | 40.0% | |
GCAAAGTTAGAGCAACTATC+AGG | - | chr8_3:66824108-66824127 | None:intergenic | 40.0% | |
!!! | TCACTATTCAGAGTTTTGGG+TGG | + | chr8_3:66824204-66824223 | Msa1303640:intron | 40.0% |
!!! | CACTATTCAGAGTTTTGGGT+GGG | + | chr8_3:66824205-66824224 | Msa1303640:intron | 40.0% |
CTGTTATAAGGGATTCCTGA+AGG | - | chr8_3:66824321-66824340 | None:intergenic | 40.0% | |
GCAATACAGATAACCCTAAG+TGG | + | chr8_3:66824358-66824377 | Msa1303640:CDS | 40.0% | |
!! | TTTGGTGGACTTGGGTATTA+TGG | - | chr8_3:66824603-66824622 | None:intergenic | 40.0% |
CACACCATAATACCCATGTA+TGG | + | chr8_3:66824653-66824672 | Msa1303640:intron | 40.0% | |
ATCGAGTAGTATGGGATACT+TGG | - | chr8_3:66824706-66824725 | None:intergenic | 40.0% | |
TATCCCATACTACTCGATGT+GGG | + | chr8_3:66824708-66824727 | Msa1303640:intron | 40.0% | |
GAATACTGTTCCCCTAGTAT+CGG | - | chr8_3:66825004-66825023 | None:intergenic | 40.0% | |
! | GATTACCTTTTCCTGGTACT+TGG | - | chr8_3:66825087-66825106 | None:intergenic | 40.0% |
GGAAATTCATCATAAGTGGC+TGG | - | chr8_3:66825111-66825130 | None:intergenic | 40.0% | |
! | TTTGCGAGTCTCTTCTTTTG+AGG | + | chr8_3:66825170-66825189 | Msa1303640:intron | 40.0% |
TGAGCAAAACAAGAACGTGT+GGG | - | chr8_3:66825204-66825223 | None:intergenic | 40.0% | |
!! | TACTGGCCTTCTGATATTTC+AGG | + | chr8_3:66825354-66825373 | Msa1303640:intron | 40.0% |
TCTCAGCCTGAAATATCAGA+AGG | - | chr8_3:66825363-66825382 | None:intergenic | 40.0% | |
TCTGATATTTCAGGCTGAGA+AGG | + | chr8_3:66825363-66825382 | Msa1303640:intron | 40.0% | |
! | GCTTCGTAAAAGTTTTCCTG+AGG | + | chr8_3:66825396-66825415 | Msa1303640:CDS | 40.0% |
! | CGTAAAAGTTTTCCTGAGGA+TGG | + | chr8_3:66825400-66825419 | Msa1303640:CDS | 40.0% |
TCAGCTGGAGCAATTACATT+TGG | + | chr8_3:66825463-66825482 | Msa1303640:CDS | 40.0% | |
! | CTTACAGTTGTTGGCCATTT+TGG | + | chr8_3:66825554-66825573 | Msa1303640:intron | 40.0% |
!!! | GTTGGCCATTTTGGTTAAGT+TGG | + | chr8_3:66825563-66825582 | Msa1303640:intron | 40.0% |
TGAGTTGTCAAACTCCATTG+AGG | + | chr8_3:66825679-66825698 | Msa1303640:intron | 40.0% | |
CCGTAACCATAATGCATGAT+GGG | - | chr8_3:66825765-66825784 | None:intergenic | 40.0% | |
CCCATCATGCATTATGGTTA+CGG | + | chr8_3:66825762-66825781 | Msa1303640:intron | 40.0% | |
CCATCATGCATTATGGTTAC+GGG | + | chr8_3:66825763-66825782 | Msa1303640:intron | 40.0% | |
CATCATGCATTATGGTTACG+GGG | + | chr8_3:66825764-66825783 | Msa1303640:intron | 40.0% | |
ATCATGCATTATGGTTACGG+GGG | + | chr8_3:66825765-66825784 | Msa1303640:intron | 40.0% | |
ATGGAAACGTCTCTATTCAC+AGG | - | chr8_3:66825882-66825901 | None:intergenic | 40.0% | |
GTGACTGTAACATACATGCA+TGG | - | chr8_3:66825926-66825945 | None:intergenic | 40.0% | |
CTTCTATGAGTATCTGCTCA+AGG | + | chr8_3:66826160-66826179 | Msa1303640:CDS | 40.0% | |
!! | CCCAACCACGATTTTTAAGA+TGG | - | chr8_3:66826524-66826543 | None:intergenic | 40.0% |
!! | CTCACAAAATCGGCTTTGTT+AGG | - | chr8_3:66826557-66826576 | None:intergenic | 40.0% |
! | CGATTTTGTGAGCTTGTGTT+AGG | + | chr8_3:66826565-66826584 | Msa1303640:intron | 40.0% |
AAGATGGTATCAGAGCCTAT+CGG | + | chr8_3:66826604-66826623 | Msa1303640:intron | 40.0% | |
! | GCGTGTATATAAATGGTGGA+TGG | - | chr8_3:66826635-66826654 | None:intergenic | 40.0% |
TGGTGCGTGTATATAAATGG+TGG | - | chr8_3:66826639-66826658 | None:intergenic | 40.0% | |
!! | GCTTGGTGCGTGTATATAAA+TGG | - | chr8_3:66826642-66826661 | None:intergenic | 40.0% |
TAAAAACCCAAGTCCCACAT+TGG | + | chr8_3:66826693-66826712 | Msa1303640:intron | 40.0% | |
ATCTATCCAATGTGGGACTT+GGG | - | chr8_3:66826702-66826721 | None:intergenic | 40.0% | |
TATCTATCCAATGTGGGACT+TGG | - | chr8_3:66826703-66826722 | None:intergenic | 40.0% | |
AAGTCCCACATTGGATAGAT+AGG | + | chr8_3:66826702-66826721 | Msa1303640:intron | 40.0% | |
GAGTCCTATCTATCCAATGT+GGG | - | chr8_3:66826709-66826728 | None:intergenic | 40.0% | |
AGAGTCCTATCTATCCAATG+TGG | - | chr8_3:66826710-66826729 | None:intergenic | 40.0% | |
!! | ACTTACAAAACCGGCTTGTA+AGG | - | chr8_3:66826766-66826785 | None:intergenic | 40.0% |
!! | ACAAGCCGGTTTTGTAAGTT+AGG | + | chr8_3:66826767-66826786 | Msa1303640:intron | 40.0% |
TTGGGCCTAACTTACAAAAC+CGG | - | chr8_3:66826775-66826794 | None:intergenic | 40.0% | |
ATGTGGGAGACATCAATGAA+AGG | + | chr8_3:66826957-66826976 | Msa1303640:CDS | 40.0% | |
GTGTACATATCCGAGAAACT+TGG | + | chr8_3:66827020-66827039 | Msa1303640:CDS | 40.0% | |
AAATTGCCTCCACATGAATG+AGG | + | chr8_3:66827355-66827374 | Msa1303640:intron | 40.0% | |
AACAAGGAATTCGTCGTGAA+AGG | + | chr8_3:66827398-66827417 | Msa1303640:intron | 40.0% | |
GTGCTGTAAATTGTAACTCC+TGG | + | chr8_3:66827420-66827439 | Msa1303640:intron | 40.0% | |
AAGGTCACTTGGAAAAAACC+AGG | - | chr8_3:66827441-66827460 | None:intergenic | 40.0% | |
TCCTAAACACTTAAGCTGTC+TGG | + | chr8_3:66827501-66827520 | Msa1303640:intron | 40.0% | |
ACCAGACAGCTTAAGTGTTT+AGG | - | chr8_3:66827505-66827524 | None:intergenic | 40.0% | |
TAAACACTTAAGCTGTCTGG+TGG | + | chr8_3:66827504-66827523 | Msa1303640:intron | 40.0% | |
TGCATATTTAATGCCTGCTG+TGG | + | chr8_3:66827663-66827682 | Msa1303640:intron | 40.0% | |
GGGGACATATATTGAATGCA+AGG | + | chr8_3:66827694-66827713 | Msa1303640:intron | 40.0% | |
!! | TGTGCGCTGGTCTTAATAAA+AGG | - | chr8_3:66827769-66827788 | None:intergenic | 40.0% |
TAAGAGGCAAGAGTAATGCT+GGG | - | chr8_3:66827824-66827843 | None:intergenic | 40.0% | |
TTGCCTCTTACCCTACAAAT+TGG | + | chr8_3:66827834-66827853 | Msa1303640:intron | 40.0% | |
GTTCCAATTTGTAGGGTAAG+AGG | - | chr8_3:66827840-66827859 | None:intergenic | 40.0% | |
ACTTCAGATGCTTTGCAGTA+TGG | - | chr8_3:66827949-66827968 | None:intergenic | 40.0% | |
ATCTAATTGTGCAGCTTGCA+TGG | + | chr8_3:66828116-66828135 | Msa1303640:intron | 40.0% | |
!! | CTAATTTAGTTGGCGTTGAC+TGG | - | chr8_3:66828159-66828178 | None:intergenic | 40.0% |
TCAACGCCAACTAAATTAGC+AGG | + | chr8_3:66828160-66828179 | Msa1303640:CDS | 40.0% | |
CAACGCCAACTAAATTAGCA+GGG | + | chr8_3:66828161-66828180 | Msa1303640:CDS | 40.0% | |
AACGCCAACTAAATTAGCAG+GGG | + | chr8_3:66828162-66828181 | Msa1303640:CDS | 40.0% | |
TTCTCCCCTGCTAATTTAGT+TGG | - | chr8_3:66828169-66828188 | None:intergenic | 40.0% | |
CTTAGCACATAGCATCTAAG+GGG | - | chr8_3:66828249-66828268 | None:intergenic | 40.0% | |
CCTTAGCACATAGCATCTAA+GGG | - | chr8_3:66828250-66828269 | None:intergenic | 40.0% | |
ACCTTAGCACATAGCATCTA+AGG | - | chr8_3:66828251-66828270 | None:intergenic | 40.0% | |
AGGTCTTTGGATATTCCATG+AGG | - | chr8_3:66828304-66828323 | None:intergenic | 40.0% | |
AAACATACCAAGAATGGGGT+TGG | + | chr8_3:66828370-66828389 | Msa1303640:CDS | 40.0% | |
AAATGTTCCAACCCCATTCT+TGG | - | chr8_3:66828380-66828399 | None:intergenic | 40.0% | |
! | ACATTTGTGGCGAACTTGTT+TGG | + | chr8_3:66828545-66828564 | Msa1303640:intron | 40.0% |
! | CCGAGATCATTAGCACATTT+TGG | - | chr8_3:66828588-66828607 | None:intergenic | 40.0% |
GAGGAAAATCCTGCAGAAAT+TGG | + | chr8_3:66828611-66828630 | Msa1303640:intron | 40.0% | |
TTCATGCAACCAATTTCTGC+AGG | - | chr8_3:66828623-66828642 | None:intergenic | 40.0% | |
TTCACCTGGGTATTCAACAA+TGG | - | chr8_3:66828787-66828806 | None:intergenic | 40.0% | |
TTGAATACCCAGGTGAATAC+AGG | + | chr8_3:66828790-66828809 | Msa1303640:intron | 40.0% | |
TTTGTCACCTGTATTCACCT+GGG | - | chr8_3:66828800-66828819 | None:intergenic | 40.0% | |
!! | CAAGAGATAGAGGTACTTGA+GGG | - | chr8_3:66828857-66828876 | None:intergenic | 40.0% |
!! | ACAAGAGATAGAGGTACTTG+AGG | - | chr8_3:66828858-66828877 | None:intergenic | 40.0% |
GTGGTGAAAACAAGAGATAG+AGG | - | chr8_3:66828867-66828886 | None:intergenic | 40.0% | |
!! | TCATCAAGAGAGATAACGGA+AGG | - | chr8_3:66828889-66828908 | None:intergenic | 40.0% |
CCGTTATCTCTCTTGATGAA+TGG | + | chr8_3:66828890-66828909 | Msa1303640:CDS | 40.0% | |
GTTACTAGAGGTTCTCATGA+AGG | + | chr8_3:66828946-66828965 | Msa1303640:CDS | 40.0% | |
TTTCTCCCATGCAAATGATG+AGG | - | chr8_3:66829000-66829019 | None:intergenic | 40.0% | |
CATTTGCATGGGAGAAAAGA+AGG | + | chr8_3:66829003-66829022 | Msa1303640:CDS | 40.0% | |
AGAAAAGGGAAGTCATGCAA+GGG | - | chr8_3:66829083-66829102 | None:intergenic | 40.0% | |
GCAAGAACAAACCAAAATGG+TGG | - | chr8_3:66829169-66829188 | None:intergenic | 40.0% | |
!! | TTTGGTTTGTTCTTGCAGAG+GGG | + | chr8_3:66829173-66829192 | Msa1303640:CDS | 40.0% |
! | CCTCCAATCTGAAGTTATGT+GGG | + | chr8_3:66829239-66829258 | Msa1303640:CDS | 40.0% |
AACGAACGAACGATAGAACG+AGG | - | chr8_3:66821438-66821457 | None:intergenic | 45.0% | |
GTTCGTTCCTTCCAAAATCG+TGG | + | chr8_3:66821459-66821478 | Msa1303640:five_prime_UTR | 45.0% | |
! | CTGTGTTCCACGATTTTGGA+AGG | - | chr8_3:66821469-66821488 | None:intergenic | 45.0% |
ATCGTGGAACACAGAAACAG+AGG | + | chr8_3:66821475-66821494 | Msa1303640:five_prime_UTR | 45.0% | |
TCATACATGGGTGCAAAACG+GGG | - | chr8_3:66821556-66821575 | None:intergenic | 45.0% | |
! | CATACATTTTCGGAATGGCG+AGG | + | chr8_3:66821644-66821663 | Msa1303640:exon | 45.0% |
!! | CAACAAGGGTGTTTCTGTTC+CGG | + | chr8_3:66822016-66822035 | Msa1303640:CDS | 45.0% |
TGAAAAATATGCCTGGGGCA+AGG | + | chr8_3:66822130-66822149 | Msa1303640:CDS | 45.0% | |
! | GTGTGGGGAAAGTTCTAGTT+GGG | - | chr8_3:66823116-66823135 | None:intergenic | 45.0% |
! | CATTTTCTTGAGGGACAGGT+TGG | - | chr8_3:66823138-66823157 | None:intergenic | 45.0% |
ACGAGTCTCACGACTTAACT+TGG | - | chr8_3:66823239-66823258 | None:intergenic | 45.0% | |
GAGTGGTGTGGTATTGTGTT+GGG | + | chr8_3:66823274-66823293 | Msa1303640:intron | 45.0% | |
TACTCGTCTAACACTGCATG+GGG | - | chr8_3:66823380-66823399 | None:intergenic | 45.0% | |
CTACTCGTCTAACACTGCAT+GGG | - | chr8_3:66823381-66823400 | None:intergenic | 45.0% | |
CATGCAGTGTTAGACGAGTA+GGG | + | chr8_3:66823380-66823399 | Msa1303640:intron | 45.0% | |
GTTCTGTGTCAGGCTATGTT+TGG | + | chr8_3:66823405-66823424 | Msa1303640:intron | 45.0% | |
AAGCTGAGTGTTCCCTTGTA+TGG | - | chr8_3:66823510-66823529 | None:intergenic | 45.0% | |
!!! | ATGACTGGTGTCGACAGTTT+TGG | + | chr8_3:66823797-66823816 | Msa1303640:CDS | 45.0% |
TCTCGAACACACTAACTTCG+AGG | - | chr8_3:66824025-66824044 | None:intergenic | 45.0% | |
GTGTGTTCGAGACAACCATA+AGG | + | chr8_3:66824033-66824052 | Msa1303640:CDS | 45.0% | |
CTTAGTGCTTACGATCTCTC+TGG | + | chr8_3:66824231-66824250 | Msa1303640:CDS | 45.0% | |
CGATGAAGTCTTCCTCGAAA+AGG | + | chr8_3:66824254-66824273 | Msa1303640:CDS | 45.0% | |
!! | CAAGATCTCTAGCCTTTTCG+AGG | - | chr8_3:66824269-66824288 | None:intergenic | 45.0% |
AGGCTAGAGATCTTGCAGAT+AGG | + | chr8_3:66824274-66824293 | Msa1303640:CDS | 45.0% | |
CAGATAACCCTAAGTGGACA+CGG | + | chr8_3:66824364-66824383 | Msa1303640:CDS | 45.0% | |
AGATAACCCTAAGTGGACAC+GGG | + | chr8_3:66824365-66824384 | Msa1303640:CDS | 45.0% | |
AGGACTTAAACATGGCGACT+TGG | + | chr8_3:66824498-66824517 | Msa1303640:intron | 45.0% | |
TGCTACTCAATGTGGGACTT+GGG | + | chr8_3:66824573-66824592 | Msa1303640:intron | 45.0% | |
!! | CTGGGATATTTGGTGGACTT+GGG | - | chr8_3:66824611-66824630 | None:intergenic | 45.0% |
!! | TCTGGGATATTTGGTGGACT+TGG | - | chr8_3:66824612-66824631 | None:intergenic | 45.0% |
! | GAGAAGTCTGGGATATTTGG+TGG | - | chr8_3:66824618-66824637 | None:intergenic | 45.0% |
GTATCCCATACTACTCGATG+TGG | + | chr8_3:66824707-66824726 | Msa1303640:intron | 45.0% | |
ATCCCATACTACTCGATGTG+GGG | + | chr8_3:66824709-66824728 | Msa1303640:intron | 45.0% | |
AACCAAAGATCCCAAGTACC+AGG | + | chr8_3:66825073-66825092 | Msa1303640:CDS | 45.0% | |
TTCCTGGTACTTGGGATCTT+TGG | - | chr8_3:66825078-66825097 | None:intergenic | 45.0% | |
AGATCCCAAGTACCAGGAAA+AGG | + | chr8_3:66825079-66825098 | Msa1303640:CDS | 45.0% | |
GTGAGCAAAACAAGAACGTG+TGG | - | chr8_3:66825205-66825224 | None:intergenic | 45.0% | |
! | GCTGATTTAGTTCCGGTTTG+TGG | - | chr8_3:66825448-66825467 | None:intergenic | 45.0% |
CAAACCGGAACTAAATCAGC+TGG | + | chr8_3:66825448-66825467 | Msa1303640:CDS | 45.0% | |
! | TGCTCCAGCTGATTTAGTTC+CGG | - | chr8_3:66825455-66825474 | None:intergenic | 45.0% |
!! | CATTTGGTGCTATGGGTGAT+AGG | + | chr8_3:66825479-66825498 | Msa1303640:CDS | 45.0% |
CCCGTAACCATAATGCATGA+TGG | - | chr8_3:66825766-66825785 | None:intergenic | 45.0% | |
CATTATGGTTACGGGGGATA+TGG | + | chr8_3:66825771-66825790 | Msa1303640:intron | 45.0% | |
ACGGGGGATATGGAATAAAC+TGG | + | chr8_3:66825781-66825800 | Msa1303640:intron | 45.0% | |
AGAAGTCTACGGTCTAGCAA+AGG | - | chr8_3:66826079-66826098 | None:intergenic | 45.0% | |
!! | AGTCTTGTTTCCTTGTACCC+AGG | - | chr8_3:66826186-66826205 | None:intergenic | 45.0% |
AGTGTGTAACACAGGATAGC+TGG | - | chr8_3:66826305-66826324 | None:intergenic | 45.0% | |
CAGAGTCAAGTGTGTAACAC+AGG | - | chr8_3:66826313-66826332 | None:intergenic | 45.0% | |
AGAACATGCATTGCAGAGCT+CGG | - | chr8_3:66826447-66826466 | None:intergenic | 45.0% | |
!! | CGGCTTTGTTAGGTTGTGTT+AGG | - | chr8_3:66826547-66826566 | None:intergenic | 45.0% |
CTTGGAAATAGGCCTACATC+TGG | + | chr8_3:66826890-66826909 | Msa1303640:intron | 45.0% | |
ATACACAGGGATCCAGATGT+AGG | - | chr8_3:66826905-66826924 | None:intergenic | 45.0% | |
! | GAACTAGCATGTTTTGCTCC+TGG | + | chr8_3:66827151-66827170 | Msa1303640:CDS | 45.0% |
! | ATGTTTTGCTCCTGGAATGC+TGG | + | chr8_3:66827159-66827178 | Msa1303640:CDS | 45.0% |
CAAATGTATGGCTCTTGCAG+AGG | + | chr8_3:66827219-66827238 | Msa1303640:CDS | 45.0% | |
CCTTTACCTCATTCATGTGG+AGG | - | chr8_3:66827364-66827383 | None:intergenic | 45.0% | |
CCTCCACATGAATGAGGTAA+AGG | + | chr8_3:66827361-66827380 | Msa1303640:intron | 45.0% | |
GGTAAGAAACCTTCGGAACA+AGG | + | chr8_3:66827382-66827401 | Msa1303640:intron | 45.0% | |
!!! | ATGCCTGCTGTGGTTTTGTT+TGG | + | chr8_3:66827673-66827692 | Msa1303640:intron | 45.0% |
!!! | TGCCTGCTGTGGTTTTGTTT+GGG | + | chr8_3:66827674-66827693 | Msa1303640:intron | 45.0% |
GTAAGAGGCAAGAGTAATGC+TGG | - | chr8_3:66827825-66827844 | None:intergenic | 45.0% | |
CTGGTCAGACAGAGAAGTTA+CGG | - | chr8_3:66827917-66827936 | None:intergenic | 45.0% | |
GATGCTTTGCAGTATGGTGA+TGG | - | chr8_3:66827943-66827962 | None:intergenic | 45.0% | |
GGAGAACTATTACTTCCGCA+AGG | + | chr8_3:66828183-66828202 | Msa1303640:CDS | 45.0% | |
CTATTACTTCCGCAAGGATG+AGG | + | chr8_3:66828189-66828208 | Msa1303640:CDS | 45.0% | |
AGATCCAAACCTCATCCTTG+CGG | - | chr8_3:66828201-66828220 | None:intergenic | 45.0% | |
CCCTTAGATGCTATGTGCTA+AGG | + | chr8_3:66828247-66828266 | Msa1303640:intron | 45.0% | |
TAGAGTCACTGTTCTACCTC+TGG | + | chr8_3:66828331-66828350 | Msa1303640:CDS | 45.0% | |
AAGAACTCTCGCACTGAAAC+AGG | + | chr8_3:66828414-66828433 | Msa1303640:CDS | 45.0% | |
CGCACTGAAACAGGATATGT+TGG | + | chr8_3:66828423-66828442 | Msa1303640:CDS | 45.0% | |
CTTTGTCACCTGTATTCACC+TGG | - | chr8_3:66828801-66828820 | None:intergenic | 45.0% | |
!! | TCAAGAGAGATAACGGAAGG+TGG | - | chr8_3:66828886-66828905 | None:intergenic | 45.0% |
GAGAAAAGGGAAGTCATGCA+AGG | - | chr8_3:66829084-66829103 | None:intergenic | 45.0% | |
! | ATGCTGGTGATCCACCATTT+TGG | + | chr8_3:66829155-66829174 | Msa1303640:CDS | 45.0% |
ACAAACCAACTGCATGGTGA+TGG | - | chr8_3:66829213-66829232 | None:intergenic | 45.0% | |
! | GCCTCCAATCTGAAGTTATG+TGG | + | chr8_3:66829238-66829257 | Msa1303640:CDS | 45.0% |
CCCACATAACTTCAGATTGG+AGG | - | chr8_3:66829242-66829261 | None:intergenic | 45.0% | |
ACTGACCACTTACAGAAACG+TGG | + | chr8_3:66829410-66829429 | Msa1303640:three_prime_UTR | 45.0% | |
TTGCACCACGTTTCTGTAAG+TGG | - | chr8_3:66829418-66829437 | None:intergenic | 45.0% | |
CTTAAGTTCATCCTTGCCCC+AGG | - | chr8_3:66822144-66822163 | None:intergenic | 50.0% | |
CTGGGGCAAGGATGAACTTA+AGG | + | chr8_3:66822142-66822161 | Msa1303640:CDS | 50.0% | |
AAGGTGTAGCCCCGTTGTAT+GGG | - | chr8_3:66822782-66822801 | None:intergenic | 50.0% | |
! | AAAGGTGTAGCCCCGTTGTA+TGG | - | chr8_3:66822783-66822802 | None:intergenic | 50.0% |
ATACAACGGGGCTACACCTT+TGG | + | chr8_3:66822782-66822801 | Msa1303640:intron | 50.0% | |
TACAACGGGGCTACACCTTT+GGG | + | chr8_3:66822783-66822802 | Msa1303640:intron | 50.0% | |
! | GGTGTGGGGAAAGTTCTAGT+TGG | - | chr8_3:66823117-66823136 | None:intergenic | 50.0% |
CGAGTGGTGTGGTATTGTGT+TGG | + | chr8_3:66823273-66823292 | Msa1303640:intron | 50.0% | |
TGCAGGGATGTCGTGAGTTT+GGG | - | chr8_3:66823309-66823328 | None:intergenic | 50.0% | |
TTGCAGGGATGTCGTGAGTT+TGG | - | chr8_3:66823310-66823329 | None:intergenic | 50.0% | |
CATCCACCCTATCCCATTGT+CGG | + | chr8_3:66823341-66823360 | Msa1303640:intron | 50.0% | |
ATCCACCCTATCCCATTGTC+GGG | + | chr8_3:66823342-66823361 | Msa1303640:intron | 50.0% | |
GAGTTTACCCACCCGACAAT+GGG | - | chr8_3:66823356-66823375 | None:intergenic | 50.0% | |
TGAGTTTACCCACCCGACAA+TGG | - | chr8_3:66823357-66823376 | None:intergenic | 50.0% | |
CCTACTCGTCTAACACTGCA+TGG | - | chr8_3:66823382-66823401 | None:intergenic | 50.0% | |
CCATGCAGTGTTAGACGAGT+AGG | + | chr8_3:66823379-66823398 | Msa1303640:intron | 50.0% | |
GAGTAGGGTTGTTCTGTGTC+AGG | + | chr8_3:66823395-66823414 | Msa1303640:intron | 50.0% | |
! | CTTTTGTTGCAGCTGAAGCC+CGG | + | chr8_3:66823467-66823486 | Msa1303640:intron | 50.0% |
!! | TCATTGATGGTGGCTGTGAG+AGG | - | chr8_3:66823781-66823800 | None:intergenic | 50.0% |
TCACAGCCACCATCAATGAC+TGG | + | chr8_3:66823782-66823801 | Msa1303640:intron | 50.0% | |
TCGACACCAGTCATTGATGG+TGG | - | chr8_3:66823791-66823810 | None:intergenic | 50.0% | |
CTGTCGACACCAGTCATTGA+TGG | - | chr8_3:66823794-66823813 | None:intergenic | 50.0% | |
!!! | ACTGGTGTCGACAGTTTTGG+CGG | + | chr8_3:66823800-66823819 | Msa1303640:CDS | 50.0% |
!! | TCGACAGTTTTGGCGGTCTA+GGG | + | chr8_3:66823807-66823826 | Msa1303640:CDS | 50.0% |
! | CCTGAAGGTGTATTCCAAGC+AGG | - | chr8_3:66824306-66824325 | None:intergenic | 50.0% |
CCTGCTTGGAATACACCTTC+AGG | + | chr8_3:66824303-66824322 | Msa1303640:CDS | 50.0% | |
GACATACCCGTGTCCACTTA+GGG | - | chr8_3:66824374-66824393 | None:intergenic | 50.0% | |
AGACATACCCGTGTCCACTT+AGG | - | chr8_3:66824375-66824394 | None:intergenic | 50.0% | |
TAAGTGGACACGGGTATGTC+TGG | + | chr8_3:66824374-66824393 | Msa1303640:intron | 50.0% | |
AAGTGGACACGGGTATGTCT+GGG | + | chr8_3:66824375-66824394 | Msa1303640:intron | 50.0% | |
! | GTGCTACTCAATGTGGGACT+TGG | + | chr8_3:66824572-66824591 | Msa1303640:intron | 50.0% |
AGCCCCACATCGAGTAGTAT+GGG | - | chr8_3:66824714-66824733 | None:intergenic | 50.0% | |
AAGCCCCACATCGAGTAGTA+TGG | - | chr8_3:66824715-66824734 | None:intergenic | 50.0% | |
TACTACTCGATGTGGGGCTT+AGG | + | chr8_3:66824715-66824734 | Msa1303640:intron | 50.0% | |
! | GGCTGGAGATTACCTTTTCC+TGG | - | chr8_3:66825094-66825113 | None:intergenic | 50.0% |
CAGCTGCCCATCATGCATTA+TGG | + | chr8_3:66825756-66825775 | Msa1303640:intron | 50.0% | |
ATGAGTATCTGCTCAAGGCC+TGG | + | chr8_3:66826165-66826184 | Msa1303640:CDS | 50.0% | |
TGAGTATCTGCTCAAGGCCT+GGG | + | chr8_3:66826166-66826185 | Msa1303640:CDS | 50.0% | |
GTAACACAGGATAGCTGGAC+CGG | - | chr8_3:66826300-66826319 | None:intergenic | 50.0% | |
TGCCTCTCACTAATGCACCA+TGG | + | chr8_3:66826331-66826350 | Msa1303640:intron | 50.0% | |
GTCCATGGTGCATTAGTGAG+AGG | - | chr8_3:66826336-66826355 | None:intergenic | 50.0% | |
ACGCACCAAGCAAATAGTGC+TGG | + | chr8_3:66826651-66826670 | Msa1303640:intron | 50.0% | |
CGCACCAAGCAAATAGTGCT+GGG | + | chr8_3:66826652-66826671 | Msa1303640:intron | 50.0% | |
!! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr8_3:66826761-66826780 | None:intergenic | 50.0% |
!! | ATGCTGGCTTTGGGATCTTC+TGG | + | chr8_3:66827175-66827194 | Msa1303640:CDS | 50.0% |
!! | GCTTTGGGATCTTCTGGCTA+CGG | + | chr8_3:66827181-66827200 | Msa1303640:CDS | 50.0% |
ATGTATGGCTCTTGCAGAGG+AGG | + | chr8_3:66827222-66827241 | Msa1303640:CDS | 50.0% | |
CGACGAATTCCTTGTTCCGA+AGG | - | chr8_3:66827394-66827413 | None:intergenic | 50.0% | |
ACACTTAAGCTGTCTGGTGG+AGG | + | chr8_3:66827507-66827526 | Msa1303640:intron | 50.0% | |
!!! | GCCTGCTGTGGTTTTGTTTG+GGG | + | chr8_3:66827675-66827694 | Msa1303640:intron | 50.0% |
TCCCCAAACAAAACCACAGC+AGG | - | chr8_3:66827679-66827698 | None:intergenic | 50.0% | |
TCTGGAGAAAACTTGTGCGC+TGG | - | chr8_3:66827782-66827801 | None:intergenic | 50.0% | |
! | AGAAGTTACGGTCTGGCTTC+AGG | - | chr8_3:66827905-66827924 | None:intergenic | 50.0% |
CAGACAGAGAAGTTACGGTC+TGG | - | chr8_3:66827912-66827931 | None:intergenic | 50.0% | |
!! | TGCAGTATGGTGATGGTCAC+TGG | - | chr8_3:66827936-66827955 | None:intergenic | 50.0% |
ACTTCCGCAAGGATGAGGTT+TGG | + | chr8_3:66828194-66828213 | Msa1303640:intron | 50.0% | |
!! | TGTTTCTGGTGAAACGCCAG+AGG | - | chr8_3:66828350-66828369 | None:intergenic | 50.0% |
GTGCTAATGATCTCGGTGAG+AGG | + | chr8_3:66828592-66828611 | Msa1303640:intron | 50.0% | |
GGTACTTGAGGGTTTCTGCA+AGG | - | chr8_3:66828846-66828865 | None:intergenic | 50.0% | |
CACGTAGCACCAATATGTCC+TGG | - | chr8_3:66829113-66829132 | None:intergenic | 50.0% | |
AGCATGCAAGATCGTGGCAA+CGG | - | chr8_3:66829140-66829159 | None:intergenic | 50.0% | |
ATCACCAGCATGCAAGATCG+TGG | - | chr8_3:66829146-66829165 | None:intergenic | 50.0% | |
ATGCTCCATCACCATGCAGT+TGG | + | chr8_3:66829205-66829224 | Msa1303640:CDS | 50.0% | |
CCACAGACAAACCAACTGCA+TGG | - | chr8_3:66829219-66829238 | None:intergenic | 50.0% | |
!! | CCATGCAGTTGGTTTGTCTG+TGG | + | chr8_3:66829216-66829235 | Msa1303640:CDS | 50.0% |
! | TGTTTCTGTTCCGGACGACG+AGG | + | chr8_3:66822025-66822044 | Msa1303640:CDS | 55.0% |
CGTCCCACCATCCCATACAA+CGG | + | chr8_3:66822768-66822787 | Msa1303640:intron | 55.0% | |
GTCCCACCATCCCATACAAC+GGG | + | chr8_3:66822769-66822788 | Msa1303640:intron | 55.0% | |
TCCCACCATCCCATACAACG+GGG | + | chr8_3:66822770-66822789 | Msa1303640:intron | 55.0% | |
TGTAGCCCCGTTGTATGGGA+TGG | - | chr8_3:66822778-66822797 | None:intergenic | 55.0% | |
ACAACGGGGCTACACCTTTG+GGG | + | chr8_3:66822784-66822803 | Msa1303640:intron | 55.0% | |
!! | TTGAGGGACAGGTTGGTGTG+GGG | - | chr8_3:66823131-66823150 | None:intergenic | 55.0% |
!! | CTTGAGGGACAGGTTGGTGT+GGG | - | chr8_3:66823132-66823151 | None:intergenic | 55.0% |
!! | TCTTGAGGGACAGGTTGGTG+TGG | - | chr8_3:66823133-66823152 | None:intergenic | 55.0% |
GCAGGGATGTCGTGAGTTTG+GGG | - | chr8_3:66823308-66823327 | None:intergenic | 55.0% | |
CGACAATGGGATAGGGTGGA+TGG | - | chr8_3:66823343-66823362 | None:intergenic | 55.0% | |
ACCCTATCCCATTGTCGGGT+GGG | + | chr8_3:66823346-66823365 | Msa1303640:intron | 55.0% | |
ACCCACCCGACAATGGGATA+GGG | - | chr8_3:66823350-66823369 | None:intergenic | 55.0% | |
TACCCACCCGACAATGGGAT+AGG | - | chr8_3:66823351-66823370 | None:intergenic | 55.0% | |
CGGGCTTCAGCTGCAACAAA+AGG | - | chr8_3:66823469-66823488 | None:intergenic | 55.0% | |
!! | GTCGACAGTTTTGGCGGTCT+AGG | + | chr8_3:66823806-66823825 | Msa1303640:CDS | 55.0% |
!! | CGACAGTTTTGGCGGTCTAG+GGG | + | chr8_3:66823808-66823827 | Msa1303640:CDS | 55.0% |
ATGGGAAGCAACCCATCCTC+AGG | - | chr8_3:66825415-66825434 | None:intergenic | 55.0% | |
GCATTGCAGAGCTCGGAGAA+TGG | - | chr8_3:66826440-66826459 | None:intergenic | 55.0% | |
GGTATCAGAGCCTATCGGTC+AGG | + | chr8_3:66826609-66826628 | Msa1303640:intron | 55.0% | |
CACGCCCAGCACTATTTGCT+TGG | - | chr8_3:66826659-66826678 | None:intergenic | 55.0% | |
! | AGCAAATAGTGCTGGGCGTG+AGG | + | chr8_3:66826659-66826678 | Msa1303640:intron | 55.0% |
! | GCAAATAGTGCTGGGCGTGA+GGG | + | chr8_3:66826660-66826679 | Msa1303640:intron | 55.0% |
! | CAAATAGTGCTGGGCGTGAG+GGG | + | chr8_3:66826661-66826680 | Msa1303640:intron | 55.0% |
! | AAATAGTGCTGGGCGTGAGG+GGG | + | chr8_3:66826662-66826681 | Msa1303640:intron | 55.0% |
GCACTCCTCACCTTACAAGC+CGG | + | chr8_3:66826753-66826772 | Msa1303640:intron | 55.0% | |
!! | TGCTCCTGGAATGCTGGCTT+TGG | + | chr8_3:66827165-66827184 | Msa1303640:CDS | 55.0% |
!! | GCTCCTGGAATGCTGGCTTT+GGG | + | chr8_3:66827166-66827185 | Msa1303640:CDS | 55.0% |
GATCCCAAAGCCAGCATTCC+AGG | - | chr8_3:66827172-66827191 | None:intergenic | 55.0% | |
TCGGGCAGTTCAAGCTGTTC+AGG | + | chr8_3:66827300-66827319 | Msa1303640:intron | 55.0% | |
GTTGCCACGATCTTGCATGC+TGG | + | chr8_3:66829139-66829158 | Msa1303640:CDS | 55.0% | |
TTCTGTTCCGGACGACGAGG+AGG | + | chr8_3:66822028-66822047 | Msa1303640:CDS | 60.0% | |
!! | ATGGGATGGTGGGACGCTGA+AGG | - | chr8_3:66822764-66822783 | None:intergenic | 60.0% |
GCCCCGTTGTATGGGATGGT+GGG | - | chr8_3:66822774-66822793 | None:intergenic | 60.0% | |
AGCCCCGTTGTATGGGATGG+TGG | - | chr8_3:66822775-66822794 | None:intergenic | 60.0% | |
CACCCGACAATGGGATAGGG+TGG | - | chr8_3:66823347-66823366 | None:intergenic | 60.0% | |
CACCCTATCCCATTGTCGGG+TGG | + | chr8_3:66823345-66823364 | Msa1303640:intron | 60.0% | |
GCAGCTGAAGCCCGGAAAAG+AGG | + | chr8_3:66823475-66823494 | Msa1303640:intron | 60.0% | |
CAGATAGGCTGCTGCCTGCT+TGG | + | chr8_3:66824289-66824308 | Msa1303640:CDS | 60.0% | |
CTGCTCAAGGCCTGGGTACA+AGG | + | chr8_3:66826173-66826192 | Msa1303640:CDS | 60.0% | |
! | TGGTGGATGGCCTGACCGAT+AGG | - | chr8_3:66826622-66826641 | None:intergenic | 60.0% |
! | GGATCTTCTGGCTACGGTCC+TGG | + | chr8_3:66827187-66827206 | Msa1303640:CDS | 60.0% |
TGTTCCGGACGACGAGGAGG+AGG | + | chr8_3:66822031-66822050 | Msa1303640:CDS | 65.0% | |
TCCTCCTCCTCCTCGTCGTC+CGG | - | chr8_3:66822038-66822057 | None:intergenic | 65.0% | |
TCCGGACGACGAGGAGGAGG+AGG | + | chr8_3:66822034-66822053 | Msa1303640:CDS | 70.0% | |
GGACGACGAGGAGGAGGAGG+AGG | + | chr8_3:66822037-66822056 | Msa1303640:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 66821411 | 66829543 | 66821411 | ID=Msa1303640;Name=Msa1303640 |
chr8_3 | mRNA | 66821411 | 66829543 | 66821411 | ID=Msa1303640-mRNA-1;Parent=Msa1303640;Name=Msa1303640-mRNA-1;_AED=0.14;_eAED=0.14;_QI=247|0.92|0.92|1|0.76|0.85|14|279|632 |
chr8_3 | exon | 66821411 | 66821864 | 66821411 | ID=Msa1303640-mRNA-1:exon:20345;Parent=Msa1303640-mRNA-1 |
chr8_3 | exon | 66821954 | 66822163 | 66821954 | ID=Msa1303640-mRNA-1:exon:20346;Parent=Msa1303640-mRNA-1 |
chr8_3 | exon | 66823788 | 66823900 | 66823788 | ID=Msa1303640-mRNA-1:exon:20347;Parent=Msa1303640-mRNA-1 |
chr8_3 | exon | 66823989 | 66824054 | 66823989 | ID=Msa1303640-mRNA-1:exon:20348;Parent=Msa1303640-mRNA-1 |
chr8_3 | exon | 66824215 | 66824386 | 66824215 | ID=Msa1303640-mRNA-1:exon:20349;Parent=Msa1303640-mRNA-1 |
chr8_3 | exon | 66825011 | 66825100 | 66825011 | ID=Msa1303640-mRNA-1:exon:20350;Parent=Msa1303640-mRNA-1 |
chr8_3 | exon | 66825376 | 66825500 | 66825376 | ID=Msa1303640-mRNA-1:exon:20351;Parent=Msa1303640-mRNA-1 |
chr8_3 | exon | 66826160 | 66826225 | 66826160 | ID=Msa1303640-mRNA-1:exon:20352;Parent=Msa1303640-mRNA-1 |
chr8_3 | exon | 66826953 | 66827061 | 66826953 | ID=Msa1303640-mRNA-1:exon:20353;Parent=Msa1303640-mRNA-1 |
chr8_3 | exon | 66827145 | 66827243 | 66827145 | ID=Msa1303640-mRNA-1:exon:20354;Parent=Msa1303640-mRNA-1 |
chr8_3 | exon | 66828130 | 66828210 | 66828130 | ID=Msa1303640-mRNA-1:exon:20355;Parent=Msa1303640-mRNA-1 |
chr8_3 | exon | 66828285 | 66828455 | 66828285 | ID=Msa1303640-mRNA-1:exon:20356;Parent=Msa1303640-mRNA-1 |
chr8_3 | exon | 66828802 | 66829040 | 66828802 | ID=Msa1303640-mRNA-1:exon:20357;Parent=Msa1303640-mRNA-1 |
chr8_3 | exon | 66829114 | 66829543 | 66829114 | ID=Msa1303640-mRNA-1:exon:20358;Parent=Msa1303640-mRNA-1 |
chr8_3 | five_prime_UTR | 66821411 | 66821657 | 66821411 | ID=Msa1303640-mRNA-1:five_prime_utr;Parent=Msa1303640-mRNA-1 |
chr8_3 | CDS | 66821658 | 66821864 | 66821658 | ID=Msa1303640-mRNA-1:cds;Parent=Msa1303640-mRNA-1 |
chr8_3 | CDS | 66821954 | 66822163 | 66821954 | ID=Msa1303640-mRNA-1:cds;Parent=Msa1303640-mRNA-1 |
chr8_3 | CDS | 66823788 | 66823900 | 66823788 | ID=Msa1303640-mRNA-1:cds;Parent=Msa1303640-mRNA-1 |
chr8_3 | CDS | 66823989 | 66824054 | 66823989 | ID=Msa1303640-mRNA-1:cds;Parent=Msa1303640-mRNA-1 |
chr8_3 | CDS | 66824215 | 66824386 | 66824215 | ID=Msa1303640-mRNA-1:cds;Parent=Msa1303640-mRNA-1 |
chr8_3 | CDS | 66825011 | 66825100 | 66825011 | ID=Msa1303640-mRNA-1:cds;Parent=Msa1303640-mRNA-1 |
chr8_3 | CDS | 66825376 | 66825500 | 66825376 | ID=Msa1303640-mRNA-1:cds;Parent=Msa1303640-mRNA-1 |
chr8_3 | CDS | 66826160 | 66826225 | 66826160 | ID=Msa1303640-mRNA-1:cds;Parent=Msa1303640-mRNA-1 |
chr8_3 | CDS | 66826953 | 66827061 | 66826953 | ID=Msa1303640-mRNA-1:cds;Parent=Msa1303640-mRNA-1 |
chr8_3 | CDS | 66827145 | 66827243 | 66827145 | ID=Msa1303640-mRNA-1:cds;Parent=Msa1303640-mRNA-1 |
chr8_3 | CDS | 66828130 | 66828210 | 66828130 | ID=Msa1303640-mRNA-1:cds;Parent=Msa1303640-mRNA-1 |
chr8_3 | CDS | 66828285 | 66828455 | 66828285 | ID=Msa1303640-mRNA-1:cds;Parent=Msa1303640-mRNA-1 |
chr8_3 | CDS | 66828802 | 66829040 | 66828802 | ID=Msa1303640-mRNA-1:cds;Parent=Msa1303640-mRNA-1 |
chr8_3 | CDS | 66829114 | 66829264 | 66829114 | ID=Msa1303640-mRNA-1:cds;Parent=Msa1303640-mRNA-1 |
chr8_3 | three_prime_UTR | 66829265 | 66829543 | 66829265 | ID=Msa1303640-mRNA-1:three_prime_utr;Parent=Msa1303640-mRNA-1 |
Gene Sequence |
Protein sequence |