AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1088130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1088130 MtrunA17_Chr3g0122001 73.150 473 81 2 1 427 1 473 0.0 699
Msa1088130 MtrunA17_Chr3g0122001 72.727 473 82 3 1 427 481 952 0.0 690
Msa1088130 MtrunA17_Chr3g0121991 71.459 473 88 3 1 427 74 545 0.0 686
Msa1088130 MtrunA17_Chr8g0377921 53.911 473 156 9 5 427 3 463 8.48e-165 471
Msa1088130 MtrunA17_Chr8g0377941 54.430 474 156 10 1 427 1 461 1.56e-164 471
Msa1088130 MtrunA17_Chr5g0414331 38.116 467 220 14 3 425 10 451 1.48e-89 279
Msa1088130 MtrunA17_Chr6g0464921 35.118 467 236 10 6 427 11 455 7.57e-86 269
Msa1088130 MtrunA17_Chr5g0414321 36.247 469 230 13 3 427 8 451 2.43e-85 268
Msa1088130 MtrunA17_Chr3g0098111 35.849 477 235 12 6 427 9 469 1.12e-84 267
Msa1088130 MtrunA17_Chr1g0207981 34.100 478 241 13 6 427 13 472 8.72e-83 262
Msa1088130 MtrunA17_Chr6g0464881 36.461 469 232 11 3 427 8 454 1.91e-82 260
Msa1088130 MtrunA17_Chr8g0380531 36.674 469 233 16 4 427 8 457 8.99e-82 259
Msa1088130 MtrunA17_Chr4g0053501 33.891 478 240 13 4 427 9 464 1.47e-81 259
Msa1088130 MtrunA17_Chr6g0464841 35.421 463 233 11 6 424 11 451 2.69e-80 255
Msa1088130 MtrunA17_Chr6g0464871 37.021 470 224 17 3 424 18 463 1.04e-79 254
Msa1088130 MtrunA17_Chr6g0464861 34.402 468 238 13 3 424 6 450 2.29e-78 250
Msa1088130 MtrunA17_Chr1g0207931 36.465 447 218 13 6 427 92 497 4.54e-76 245
Msa1088130 MtrunA17_Chr1g0207861 35.430 477 241 12 4 427 6 468 6.77e-76 244
Msa1088130 MtrunA17_Chr1g0161351 36.498 474 236 12 6 427 37 497 6.76e-75 242
Msa1088130 MtrunA17_Chr8g0365811 35.294 476 245 10 6 427 9 475 7.80e-72 243
Msa1088130 MtrunA17_Chr8g0365811 34.534 472 246 11 8 427 497 957 1.50e-71 242
Msa1088130 MtrunA17_Chr4g0053321 31.780 472 258 12 4 427 24 479 2.40e-71 233
Msa1088130 MtrunA17_Chr5g0393591 32.527 455 238 14 6 427 17 435 2.37e-69 226
Msa1088130 MtrunA17_Chr7g0249981 32.415 472 249 11 1 427 20 466 3.05e-69 227
Msa1088130 MtrunA17_Chr1g0207971 32.627 472 242 12 6 427 8 453 1.85e-67 221
Msa1088130 MtrunA17_Chr1g0207951 33.610 482 238 14 1 427 116 570 1.11e-66 230
Msa1088130 MtrunA17_Chr1g0207951 33.678 484 241 15 1 427 648 1108 8.03e-66 228
Msa1088130 MtrunA17_Chr1g0207831 31.875 480 243 12 7 427 9 463 2.16e-66 219
Msa1088130 MtrunA17_Chr7g0249931 32.696 471 241 15 6 427 40 483 4.61e-66 219
Msa1088130 MtrunA17_Chr5g0401721 29.498 478 262 15 8 427 10 470 2.21e-64 214
Msa1088130 MtrunA17_Chr1g0207881 32.715 431 227 13 6 427 8 384 1.57e-57 194
Msa1088130 MtrunA17_Chr7g0250001 45.178 197 93 4 232 427 265 447 5.03e-51 178
Msa1088130 MtrunA17_Chr7g0250001 31.351 185 118 4 1 185 1 176 1.13e-18 87.8
Msa1088130 MtrunA17_Chr3g0118671 27.347 490 276 13 1 427 1 473 1.40e-50 177
Msa1088130 MtrunA17_Chr7g0249961 44.845 194 92 4 232 424 77 256 1.83e-50 171
Msa1088130 MtrunA17_Chr6g0454191 28.717 491 269 15 2 427 6 480 1.04e-49 175
Msa1088130 MtrunA17_Chr7g0218811 29.412 459 259 12 6 425 15 447 2.64e-49 173
Msa1088130 MtrunA17_Chr6g0454341 28.953 487 262 16 6 427 10 477 3.70e-49 174
Msa1088130 MtrunA17_Chr8g0377911 54.745 137 62 0 5 141 6 142 4.32e-49 164
Msa1088130 MtrunA17_Chr3g0118771 27.291 491 273 14 2 427 17 488 2.73e-48 172
Msa1088130 MtrunA17_Chr5g0426431 28.747 487 261 17 6 427 12 477 4.29e-48 171
Msa1088130 MtrunA17_Chr2g0278711 28.274 481 271 13 6 427 11 476 1.08e-47 170
Msa1088130 MtrunA17_Chr6g0454301 27.607 489 266 17 6 427 263 730 1.37e-47 173
Msa1088130 MtrunA17_Chr6g0454301 36.364 187 107 3 234 420 48 222 3.81e-30 123
Msa1088130 MtrunA17_Chr3g0078841 27.984 486 268 15 6 427 10 477 2.99e-47 169
Msa1088130 MtrunA17_Chr7g0217881 28.512 477 261 11 6 427 10 461 4.17e-47 168
Msa1088130 MtrunA17_Chr3g0118701 26.052 499 271 16 1 427 10 482 4.54e-47 168
Msa1088130 MtrunA17_Chr6g0454401 27.902 491 265 15 6 427 10 480 5.86e-47 168
Msa1088130 MtrunA17_Chr3g0118711 26.220 492 275 15 3 427 10 480 7.79e-47 167
Msa1088130 MtrunA17_Chr4g0050341 29.218 486 260 17 6 424 19 487 9.36e-47 167
Msa1088130 MtrunA17_Chr6g0454361 29.218 486 264 15 6 427 11 480 1.01e-46 167
Msa1088130 MtrunA17_Chr3g0118691 26.978 493 274 15 1 427 10 482 1.41e-46 167
Msa1088130 MtrunA17_Chr6g0454351 28.571 469 272 14 6 427 12 464 2.05e-46 166
Msa1088130 MtrunA17_Chr7g0218831 27.766 461 261 15 6 424 6 436 2.25e-45 162
Msa1088130 MtrunA17_Chr6g0454181 28.337 487 267 16 6 427 10 479 2.49e-45 163
Msa1088130 MtrunA17_Chr7g0218821 28.051 467 266 13 6 425 5 448 2.61e-45 162
Msa1088130 MtrunA17_Chr6g0454321 28.632 475 257 15 3 413 7 463 2.84e-45 166
Msa1088130 MtrunA17_Chr3g0092641 27.778 486 267 16 6 427 12 477 3.27e-44 160
Msa1088130 MtrunA17_Chr3g0112771 29.622 476 255 16 1 427 7 451 5.56e-44 159
Msa1088130 MtrunA17_Chr7g0218841 27.609 460 264 14 6 424 6 437 8.58e-44 158
Msa1088130 MtrunA17_Chr6g0454151 29.293 495 250 15 6 427 10 477 1.17e-43 159
Msa1088130 MtrunA17_Chr7g0218791 28.085 470 260 15 4 425 3 442 1.24e-43 158
Msa1088130 MtrunA17_Chr5g0412131 29.253 482 257 14 6 427 12 469 1.36e-43 159
Msa1088130 MtrunA17_Chr6g0453951 27.778 486 271 14 6 427 57 526 1.41e-43 159
Msa1088130 MtrunA17_Chr6g0454201 28.016 489 266 15 6 427 11 480 2.65e-43 158
Msa1088130 MtrunA17_Chr3g0112761 26.907 472 263 11 7 427 9 449 1.08e-42 156
Msa1088130 MtrunA17_Chr8g0336331 27.975 479 276 13 6 427 10 476 1.60e-42 155
Msa1088130 MtrunA17_Chr5g0412101 29.079 478 264 13 6 427 12 470 2.86e-42 155
Msa1088130 MtrunA17_Chr3g0118661 26.994 489 274 12 2 426 9 478 4.26e-42 155
Msa1088130 MtrunA17_Chr6g0454331 27.869 488 270 19 6 427 7 478 4.91e-42 154
Msa1088130 MtrunA17_Chr4g0032331 28.721 477 252 18 5 427 7 449 6.09e-42 154
Msa1088130 MtrunA17_Chr3g0106231 27.489 462 267 14 6 427 18 451 6.73e-42 154
Msa1088130 MtrunA17_Chr6g0454291 28.834 489 262 17 6 427 7 476 9.94e-42 154
Msa1088130 MtrunA17_Chr7g0243631 26.939 490 274 17 6 427 13 486 2.41e-41 153
Msa1088130 MtrunA17_Chr5g0431441 27.350 468 274 13 6 427 18 465 3.05e-41 152
Msa1088130 MtrunA17_Chr5g0412111 29.668 482 254 17 6 427 5 461 3.17e-41 152
Msa1088130 MtrunA17_Chr6g0459311 29.185 466 254 16 1 423 35 467 5.60e-41 151
Msa1088130 MtrunA17_Chr6g0454141 26.446 484 280 14 6 427 10 479 1.78e-40 150
Msa1088130 MtrunA17_Chr6g0453961 27.778 486 272 14 6 427 19 489 5.52e-40 149
Msa1088130 MtrunA17_Chr6g0454211 27.778 486 271 16 6 427 297 766 6.11e-40 152
Msa1088130 MtrunA17_Chr6g0454211 38.372 86 32 1 254 339 172 236 2.47e-11 65.9
Msa1088130 MtrunA17_Chr3g0118751 25.306 490 257 14 1 427 1 444 3.75e-39 146
Msa1088130 MtrunA17_Chr6g0486251 31.322 348 183 8 121 423 124 460 6.13e-39 145
Msa1088130 MtrunA17_Chr6g0486201 31.322 348 183 8 121 423 124 460 6.13e-39 145
Msa1088130 MtrunA17_Chr6g0454261 27.347 490 268 17 6 427 10 479 8.67e-39 145
Msa1088130 MtrunA17_Chr7g0243781 37.681 207 110 4 234 427 275 475 1.18e-38 145
Msa1088130 MtrunA17_Chr4g0044511 26.411 496 268 16 3 427 35 504 2.26e-38 145
Msa1088130 MtrunA17_Chr7g0243871 40.097 207 103 4 234 427 274 472 3.38e-38 144
Msa1088130 MtrunA17_Chr7g0243681 27.459 488 269 16 6 427 11 479 3.96e-38 144
Msa1088130 MtrunA17_Chr4g0066201 27.273 462 283 14 10 427 22 474 9.75e-38 143
Msa1088130 MtrunA17_Chr6g0454131 26.749 486 275 12 6 427 10 478 1.46e-37 142
Msa1088130 MtrunA17_Chr8g0335161 27.824 478 274 18 1 423 1 462 1.74e-37 142
Msa1088130 MtrunA17_Chr8g0335141 29.701 468 261 16 9 423 12 464 1.76e-37 142
Msa1088130 MtrunA17_Chr7g0265141 27.593 511 247 19 5 426 8 484 3.77e-37 141
Msa1088130 MtrunA17_Chr7g0265041 26.122 490 282 15 6 427 11 488 6.54e-37 140
Msa1088130 MtrunA17_Chr8g0361371 29.201 363 206 8 106 424 112 467 6.60e-37 140
Msa1088130 MtrunA17_Chr4g0066281 26.395 466 286 13 7 427 13 466 6.84e-37 140
Msa1088130 MtrunA17_Chr3g0118721 37.245 196 108 4 234 427 107 289 1.42e-36 135
Msa1088130 MtrunA17_Chr5g0431401 25.949 474 264 15 6 427 10 448 1.48e-36 139
Msa1088130 MtrunA17_Chr5g0423981 27.171 449 286 12 6 427 10 444 1.71e-36 139
Msa1088130 MtrunA17_Chr3g0106251 38.889 198 104 3 232 427 111 293 5.50e-36 134
Msa1088130 MtrunA17_Chr7g0243771 37.379 206 116 3 231 427 274 475 9.79e-36 137
Msa1088130 MtrunA17_Chr4g0014061 37.745 204 114 3 231 425 271 470 1.49e-35 137
Msa1088130 MtrunA17_Chr4g0060511 27.984 486 277 16 6 427 11 487 2.43e-35 136
Msa1088130 MtrunA17_Chr5g0431361 25.155 485 257 14 6 427 12 453 3.74e-35 135
Msa1088130 MtrunA17_Chr8g0366391 26.707 498 260 19 6 427 9 477 4.36e-35 135
Msa1088130 MtrunA17_Chr7g0275681 25.651 499 264 17 6 427 12 480 4.89e-35 135
Msa1088130 MtrunA17_Chr7g0243801 36.893 206 117 3 231 427 275 476 7.36e-35 135
Msa1088130 MtrunA17_Chr7g0265101 25.349 501 272 17 6 427 9 486 1.26e-34 134
Msa1088130 MtrunA17_Chr6g0454121 36.548 197 113 3 231 427 294 478 1.37e-34 134
Msa1088130 MtrunA17_Chr6g0454221 36.735 196 112 3 231 426 46 229 1.40e-34 130
Msa1088130 MtrunA17_Chr4g0042891 32.544 338 176 13 120 414 124 452 1.64e-34 134
Msa1088130 MtrunA17_Chr5g0419771 35.714 210 115 4 232 427 309 512 2.34e-34 134
Msa1088130 MtrunA17_Chr8g0355011 27.945 365 230 10 80 427 13 361 2.58e-34 131
Msa1088130 MtrunA17_Chr4g0066171 26.170 470 277 14 10 427 25 476 2.71e-34 133
Msa1088130 MtrunA17_Chr4g0066151 29.521 376 201 14 102 427 118 479 3.32e-34 133
Msa1088130 MtrunA17_Chr4g0066261 36.058 208 117 4 233 427 277 481 4.32e-34 132
Msa1088130 MtrunA17_Chr6g0463861 26.271 472 287 15 6 427 13 473 8.01e-34 132
Msa1088130 MtrunA17_Chr4g0072761 26.638 458 274 14 6 424 15 449 1.07e-33 131
Msa1088130 MtrunA17_Chr4g0066221 35.749 207 120 3 233 427 275 480 1.09e-33 131
Msa1088130 MtrunA17_Chr7g0232391 39.196 199 111 5 232 423 266 461 1.46e-33 131
Msa1088130 MtrunA17_Chr5g0431421 25.105 474 268 15 6 427 10 448 2.06e-33 130
Msa1088130 MtrunA17_Chr7g0265111 36.058 208 113 3 233 427 315 515 2.38e-33 131
Msa1088130 MtrunA17_Chr7g0235051 38.424 203 110 4 234 426 255 452 2.54e-33 130
Msa1088130 MtrunA17_Chr7g0232311 29.799 349 194 9 118 424 121 460 2.66e-33 130
Msa1088130 MtrunA17_Chr8g0334831 28.226 372 207 10 106 424 111 475 2.93e-33 130
Msa1088130 MtrunA17_Chr8g0339461 40.299 201 108 5 233 423 269 467 4.30e-33 130
Msa1088130 MtrunA17_Chr8g0374901 35.407 209 122 3 231 427 271 478 5.91e-33 129
Msa1088130 MtrunA17_Chr7g0243931 36.232 207 117 5 231 427 289 490 6.32e-33 129
Msa1088130 MtrunA17_Chr7g0243761 25.519 482 261 16 6 427 11 454 7.20e-33 129
Msa1088130 MtrunA17_Chr7g0243951 36.715 207 115 5 231 427 283 483 7.50e-33 129
Msa1088130 MtrunA17_Chr6g0449931 28.195 493 254 19 1 423 1 463 7.55e-33 129
Msa1088130 MtrunA17_Chr6g0454251 28.822 399 210 13 6 340 7 395 1.08e-32 127
Msa1088130 MtrunA17_Chr7g0243711 35.468 203 118 4 234 427 118 316 1.28e-32 125
Msa1088130 MtrunA17_Chr8g0339451 39.801 201 109 5 233 423 261 459 1.55e-32 128
Msa1088130 MtrunA17_Chr6g0462521 30.376 372 215 12 83 423 88 446 1.67e-32 128
Msa1088130 MtrunA17_Chr6g0454271 36.082 194 112 3 234 427 105 286 2.35e-32 124
Msa1088130 MtrunA17_Chr8g0339631 39.500 200 108 6 233 423 269 464 4.15e-32 127
Msa1088130 MtrunA17_Chr6g0452771 36.548 197 113 3 231 427 295 479 4.45e-32 127
Msa1088130 MtrunA17_Chr8g0382021 35.874 223 127 6 214 427 273 488 7.98e-32 126
Msa1088130 MtrunA17_Chr8g0374941 33.493 209 126 4 231 427 1210 1417 1.25e-31 128
Msa1088130 MtrunA17_Chr8g0374941 31.795 195 120 4 231 413 272 465 2.41e-26 112
Msa1088130 MtrunA17_Chr8g0374941 33.508 191 114 3 231 409 737 926 3.68e-24 105
Msa1088130 MtrunA17_Chr7g0232411 38.693 199 112 5 232 423 266 461 1.50e-31 125
Msa1088130 MtrunA17_Chr1g0153451 37.056 197 115 3 234 423 265 459 1.62e-31 125
Msa1088130 MtrunA17_Chr1g0179901 23.848 499 286 16 4 427 14 493 1.65e-31 125
Msa1088130 MtrunA17_Chr8g0336651 38.776 196 112 4 234 423 267 460 1.66e-31 127
Msa1088130 MtrunA17_Chr8g0336651 39.899 198 107 4 234 421 1042 1237 5.23e-31 126
Msa1088130 MtrunA17_Chr8g0336651 38.421 190 91 3 234 423 607 770 6.48e-31 125
Msa1088130 MtrunA17_Chr5g0432731 34.259 216 124 5 214 427 97 296 1.94e-31 122
Msa1088130 MtrunA17_Chr1g0159551 37.500 200 121 4 231 427 261 459 3.90e-31 124
Msa1088130 MtrunA17_Chr8g0374971 34.300 207 125 3 232 427 274 480 4.08e-31 124
Msa1088130 MtrunA17_Chr8g0336691 38.889 198 111 3 234 423 274 469 4.85e-31 126
Msa1088130 MtrunA17_Chr8g0336691 38.384 198 112 4 234 423 1180 1375 4.57e-30 123
Msa1088130 MtrunA17_Chr8g0336691 35.533 197 91 5 234 423 741 908 1.19e-26 113
Msa1088130 MtrunA17_Chr5g0431371 24.051 474 273 14 6 427 10 448 4.92e-31 124
Msa1088130 MtrunA17_Chr8g0359821 35.025 197 116 3 231 427 293 477 5.83e-31 124
Msa1088130 MtrunA17_Chr8g0336741 38.265 196 113 3 234 423 274 467 6.63e-31 124
Msa1088130 MtrunA17_Chr7g0243861 37.745 204 112 5 234 427 289 487 7.11e-31 124
Msa1088130 MtrunA17_Chr5g0426401 34.483 232 120 6 212 427 95 310 8.05e-31 120
Msa1088130 MtrunA17_Chr8g0336731 37.563 197 115 3 234 424 293 487 9.43e-31 123
Msa1088130 MtrunA17_Chr8g0355221 36.318 201 119 4 234 427 288 486 1.14e-30 123
Msa1088130 MtrunA17_Chr1g0173121 37.500 200 121 4 231 427 264 462 1.28e-30 122
Msa1088130 MtrunA17_Chr4g0042931 41.667 192 99 7 230 414 265 450 1.29e-30 122
Msa1088130 MtrunA17_Chr8g0373301 37.879 198 110 5 234 423 270 462 1.72e-30 122
Msa1088130 MtrunA17_Chr4g0011051 33.649 211 116 6 232 427 286 487 1.84e-30 122
Msa1088130 MtrunA17_Chr7g0218311 36.444 225 131 5 214 427 260 483 2.11e-30 122
Msa1088130 MtrunA17_Chr8g0347281 27.669 459 263 17 13 420 25 465 2.32e-30 122
Msa1088130 MtrunA17_Chr7g0265051 33.333 210 117 5 232 427 284 484 2.46e-30 122
Msa1088130 MtrunA17_Chr8g0334851 27.708 480 271 17 1 421 1 463 2.69e-30 122
Msa1088130 MtrunA17_Chr7g0232401 35.648 216 128 5 216 423 251 463 4.53e-30 121
Msa1088130 MtrunA17_Chr8g0347271 27.922 462 258 16 13 420 26 466 5.42e-30 121
Msa1088130 MtrunA17_Chr4g0066131 35.096 208 120 5 231 425 267 472 5.64e-30 121
Msa1088130 MtrunA17_Chr7g0265151 33.981 206 123 3 232 427 281 483 6.09e-30 121
Msa1088130 MtrunA17_Chr8g0339601 31.024 332 177 11 137 423 2 326 6.53e-30 118
Msa1088130 MtrunA17_Chr1g0153461 37.056 197 115 3 234 423 14 208 6.90e-30 115
Msa1088130 MtrunA17_Chr7g0243851 37.073 205 112 5 234 427 244 442 7.03e-30 120
Msa1088130 MtrunA17_Chr8g0339441 26.411 443 288 12 1 423 1 425 7.88e-30 120
Msa1088130 MtrunA17_Chr3g0079731 39.409 203 107 8 234 424 279 477 1.12e-29 120
Msa1088130 MtrunA17_Chr6g0463851 33.333 207 127 3 232 427 276 482 1.60e-29 120
Msa1088130 MtrunA17_Chr8g0334861 39.899 198 106 6 230 416 257 452 1.67e-29 119
Msa1088130 MtrunA17_Chr4g0044501 24.795 488 275 17 9 427 11 475 2.37e-29 119
Msa1088130 MtrunA17_Chr1g0165701 25.754 431 241 12 51 427 78 483 2.84e-29 119
Msa1088130 MtrunA17_Chr2g0329111 25.051 491 286 15 1 424 1 476 3.01e-29 119
Msa1088130 MtrunA17_Chr7g0232341 38.500 200 112 7 232 423 266 462 3.96e-29 118
Msa1088130 MtrunA17_Chr7g0243911 38.068 176 96 5 234 400 32 203 5.93e-29 113
Msa1088130 MtrunA17_Chr5g0429711 36.318 201 109 7 232 427 275 461 6.79e-29 117
Msa1088130 MtrunA17_Chr6g0454371 35.714 182 105 3 246 427 1 170 7.21e-29 111
Msa1088130 MtrunA17_Chr6g0462531 29.846 325 183 9 136 423 144 460 1.06e-28 117
Msa1088130 MtrunA17_Chr5g0420801 27.292 480 257 18 6 424 7 455 1.06e-28 117
Msa1088130 MtrunA17_Chr5g0440421 33.971 209 119 5 231 427 292 493 1.17e-28 117
Msa1088130 MtrunA17_Chr5g0448521 30.091 329 193 11 113 427 162 467 1.34e-28 117
Msa1088130 MtrunA17_Chr4g0044521 34.826 201 119 4 233 424 266 463 1.60e-28 117
Msa1088130 MtrunA17_Chr2g0307961 25.826 484 269 14 6 427 13 468 1.83e-28 116
Msa1088130 MtrunA17_Chr5g0442541 26.157 497 252 21 8 427 7 465 2.13e-28 116
Msa1088130 MtrunA17_Chr7g0232331 36.190 210 126 4 214 417 248 455 2.93e-28 116
Msa1088130 MtrunA17_Chr6g0462571 30.286 350 188 14 118 425 124 459 3.04e-28 116
Msa1088130 MtrunA17_Chr5g0401851 34.615 208 116 6 232 427 284 483 4.09e-28 115
Msa1088130 MtrunA17_Chr2g0302991 33.831 201 123 6 233 427 266 462 5.83e-28 115
Msa1088130 MtrunA17_Chr6g0462541 25.789 380 234 11 83 425 93 461 5.84e-28 115
Msa1088130 MtrunA17_Chr5g0442561 24.324 481 288 18 8 427 7 472 1.29e-27 114
Msa1088130 MtrunA17_Chr8g0350881 33.173 208 126 3 232 427 274 480 2.30e-27 114
Msa1088130 MtrunA17_Chr2g0302961 28.767 292 186 8 141 427 191 465 2.52e-27 113
Msa1088130 MtrunA17_Chr5g0442521 34.286 210 119 7 233 427 270 475 2.55e-27 113
Msa1088130 MtrunA17_Chr6g0463891 35.294 204 120 2 232 427 285 484 3.90e-27 113
Msa1088130 MtrunA17_Chr5g0410941 33.981 206 124 3 233 427 285 489 4.95e-27 112
Msa1088130 MtrunA17_Chr5g0416741 34.975 203 121 3 232 427 285 483 5.06e-27 112
Msa1088130 MtrunA17_Chr5g0428081 34.951 206 122 3 233 427 275 479 7.47e-27 112
Msa1088130 MtrunA17_Chr2g0294931 34.466 206 123 3 233 427 277 481 8.48e-27 112
Msa1088130 MtrunA17_Chr4g0072771 23.478 460 289 15 6 424 25 462 1.15e-26 111
Msa1088130 MtrunA17_Chr5g0442581 28.610 367 186 15 121 427 126 476 1.24e-26 112
Msa1088130 MtrunA17_Chr6g0454171 35.260 173 100 3 255 427 149 309 1.36e-26 108
Msa1088130 MtrunA17_Chr8g0370941 34.434 212 116 4 234 422 272 483 1.43e-26 111
Msa1088130 MtrunA17_Chr5g0442601 33.493 209 121 7 233 427 671 875 1.53e-26 112
Msa1088130 MtrunA17_Chr5g0442601 36.000 125 74 3 233 351 198 322 4.07e-18 87.0
Msa1088130 MtrunA17_Chr5g0442491 33.971 209 120 7 233 427 270 474 2.95e-26 110
Msa1088130 MtrunA17_Chr6g0462551 36.082 194 116 4 234 425 275 462 4.05e-26 110
Msa1088130 MtrunA17_Chr5g0429681 37.766 188 103 6 234 416 310 488 4.24e-26 110
Msa1088130 MtrunA17_Chr7g0275511 35.176 199 119 5 233 423 275 471 5.53e-26 109
Msa1088130 MtrunA17_Chr7g0243611 40.741 162 83 4 231 390 143 293 7.45e-26 106
Msa1088130 MtrunA17_Chr8g0361411 25.527 474 281 16 2 427 4 453 1.10e-25 108
Msa1088130 MtrunA17_Chr5g0416821 33.824 204 110 6 232 427 287 473 1.79e-25 108
Msa1088130 MtrunA17_Chr3g0079711 37.968 187 100 5 250 424 3 185 2.46e-25 102
Msa1088130 MtrunA17_Chr5g0419761 32.547 212 125 4 229 427 279 485 2.63e-25 107
Msa1088130 MtrunA17_Chr8g0369341 24.895 474 286 16 6 424 7 465 3.13e-25 107
Msa1088130 MtrunA17_Chr8g0336261 38.514 148 79 3 246 392 1 137 3.21e-25 100
Msa1088130 MtrunA17_Chr8g0374931 33.981 206 124 5 233 427 277 481 4.85e-25 107
Msa1088130 MtrunA17_Chr5g0403641 34.928 209 114 5 234 426 299 501 5.67e-25 107
Msa1088130 MtrunA17_Chr4g0044481 41.558 154 78 4 222 372 263 407 1.75e-24 104
Msa1088130 MtrunA17_Chr2g0294921 25.673 483 284 15 6 427 162 630 2.06e-24 105
Msa1088130 MtrunA17_Chr5g0442511 31.579 209 125 7 233 427 289 493 3.74e-24 104
Msa1088130 MtrunA17_Chr7g0250021 29.450 309 164 13 6 270 12 310 3.80e-24 102
Msa1088130 MtrunA17_Chr8g0337381 42.742 124 65 3 301 423 3 121 2.01e-23 95.1
Msa1088130 MtrunA17_Chr7g0241781 24.222 450 276 17 6 425 9 423 2.38e-23 101
Msa1088130 MtrunA17_Chr5g0448551 25.000 424 270 12 8 391 9 424 8.82e-23 100
Msa1088130 MtrunA17_Chr7g0241801 23.451 452 277 16 6 425 9 423 6.60e-22 97.4
Msa1088130 MtrunA17_Chr6g0482061 25.052 483 243 18 16 415 21 467 6.86e-22 97.8
Msa1088130 MtrunA17_Chr2g0294941 31.414 191 119 3 233 412 175 364 7.86e-22 96.7
Msa1088130 MtrunA17_Chr5g0409591 32.394 213 130 5 202 404 256 464 1.15e-21 97.1
Msa1088130 MtrunA17_Chr4g0066141 27.795 331 191 10 124 427 42 351 1.34e-21 95.5
Msa1088130 MtrunA17_Chr7g0243811 40.323 124 65 3 234 354 250 367 2.32e-21 95.5
Msa1088130 MtrunA17_Chr5g0431431 37.500 152 68 4 234 385 216 340 2.47e-20 92.0
Msa1088130 MtrunA17_Chr7g0231631 31.507 219 125 4 216 427 59 259 4.48e-19 86.7
Msa1088130 MtrunA17_Chr6g0454231 28.571 224 140 5 211 427 8 218 4.53e-19 89.4
Msa1088130 MtrunA17_Chr8g0367221 21.739 483 287 16 6 427 1288 1740 5.87e-19 90.1
Msa1088130 MtrunA17_Chr8g0367221 25.107 466 252 20 6 405 798 1232 9.12e-19 89.4
Msa1088130 MtrunA17_Chr8g0367221 28.500 200 124 6 233 427 278 463 1.55e-16 82.4
Msa1088130 MtrunA17_Chr4g0029131 31.609 174 112 3 234 403 265 435 5.73e-18 86.3
Msa1088130 MtrunA17_Chr4g0029151 23.918 439 278 13 6 403 20 443 6.68e-18 85.5
Msa1088130 MtrunA17_Chr8g0336321 37.654 162 91 4 234 393 279 432 8.88e-18 85.1
Msa1088130 MtrunA17_Chr1g0196851 22.788 452 276 15 4 403 45 475 9.55e-18 85.1
Msa1088130 MtrunA17_Chr8g0336251 37.654 162 91 4 234 393 279 432 1.04e-17 85.1
Msa1088130 MtrunA17_Chr4g0069611 32.164 171 105 4 231 400 274 434 1.16e-17 84.7
Msa1088130 MtrunA17_Chr2g0283041 23.554 484 266 19 7 427 6 448 2.84e-17 83.6
Msa1088130 MtrunA17_Chr8g0357361 35.556 135 74 2 231 362 125 249 3.90e-17 81.3
Msa1088130 MtrunA17_Chr2g0319791 28.708 209 129 6 202 405 243 436 5.18e-17 82.8
Msa1088130 MtrunA17_Chr1g0207911 31.250 160 98 3 8 157 10 167 5.93e-17 80.5
Msa1088130 MtrunA17_Chr2g0278721 32.353 170 104 4 233 401 792 951 1.24e-16 82.4
Msa1088130 MtrunA17_Chr2g0278721 22.996 474 283 16 6 427 15 458 2.39e-13 72.4
Msa1088130 MtrunA17_Chr5g0427571 37.037 162 92 4 234 393 113 266 1.33e-16 80.1
Msa1088130 MtrunA17_Chr2g0319801 31.844 179 110 4 232 405 265 436 3.72e-16 80.1
Msa1088130 MtrunA17_Chr4g0040691 28.351 194 123 5 234 423 269 450 4.11e-16 80.1
Msa1088130 MtrunA17_Chr6g0466831 23.974 463 276 15 6 422 18 450 1.06e-15 79.0
Msa1088130 MtrunA17_Chr7g0232351 36.508 126 74 3 220 339 253 378 1.93e-15 77.4
Msa1088130 MtrunA17_Chr2g0319731 30.726 179 112 4 232 405 282 453 2.91e-15 77.4
Msa1088130 MtrunA17_Chr2g0319761 29.825 171 108 4 233 398 266 429 4.28e-15 77.0
Msa1088130 MtrunA17_Chr4g0040711 26.425 193 128 4 234 423 269 450 6.21e-15 76.6
Msa1088130 MtrunA17_Chr3g0092031 29.240 171 110 4 231 400 11 171 2.88e-14 71.2
Msa1088130 MtrunA17_Chr6g0466841 29.381 194 115 4 231 422 277 450 3.82e-14 73.9
Msa1088130 MtrunA17_Chr2g0319751 28.218 202 130 5 209 405 722 913 5.82e-14 74.3
Msa1088130 MtrunA17_Chr2g0319751 30.400 125 82 3 286 405 288 412 1.45e-11 66.6
Msa1088130 MtrunA17_Chr2g0278741 28.141 199 122 6 231 427 361 540 1.01e-13 73.2
Msa1088130 MtrunA17_Chr2g0302851 28.824 170 112 3 231 400 275 435 1.57e-13 72.0
Msa1088130 MtrunA17_Chr4g0039881 28.283 198 123 5 231 427 251 430 2.07e-13 71.6
Msa1088130 MtrunA17_Chr7g0243731 42.188 64 37 0 301 364 10 73 1.54e-12 62.8
Msa1088130 MtrunA17_Chr7g0249971 49.206 63 30 1 6 68 11 71 7.82e-12 62.8
Msa1088130 MtrunA17_Chr6g0454391 41.538 65 33 1 316 380 13 72 2.92e-11 60.8
Msa1088130 MtrunA17_Chr6g0464091 21.564 422 252 13 6 371 18 416 3.50e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1088130 AT4G15550.1 47.312 465 196 12 6 426 13 472 8.59e-140 408
Msa1088130 AT1G05560.1 47.312 465 184 14 6 427 5 451 3.09e-124 369
Msa1088130 AT1G05560.2 47.312 465 184 14 6 427 55 501 6.30e-124 369
Msa1088130 AT4G14090.1 43.886 458 204 10 6 426 13 454 3.91e-122 363
Msa1088130 AT1G05530.1 45.243 473 194 14 1 427 1 454 6.30e-122 362
Msa1088130 AT2G43820.1 36.752 468 222 14 6 427 7 446 8.18e-88 274
Msa1088130 AT2G43840.2 36.831 467 223 13 6 427 7 446 2.08e-84 266
Msa1088130 AT2G43840.1 36.831 467 223 13 6 427 7 446 2.99e-84 265
Msa1088130 AT1G05675.1 35.865 474 229 13 1 424 1 449 5.56e-82 259
Msa1088130 AT4G15490.1 34.167 480 245 12 2 427 4 466 3.02e-79 253
Msa1088130 AT1G24100.1 35.043 468 238 11 6 427 11 458 3.51e-78 250
Msa1088130 AT1G05680.1 33.755 474 239 12 1 424 1 449 1.06e-76 246
Msa1088130 AT4G15480.1 35.456 471 244 13 6 427 19 478 7.08e-76 244
Msa1088130 AT2G31790.1 35.881 471 233 15 2 424 4 453 2.41e-75 242
Msa1088130 AT3G21560.1 33.192 473 253 13 6 427 12 472 1.64e-74 241
Msa1088130 AT4G15500.1 33.615 473 244 13 6 427 9 462 5.47e-74 239
Msa1088130 AT2G31750.1 34.737 475 229 17 6 427 8 454 6.83e-74 238
Msa1088130 AT2G23260.1 33.193 476 240 14 2 427 6 453 1.07e-73 238
Msa1088130 AT2G31750.2 34.737 475 229 17 6 427 8 454 3.61e-73 238
Msa1088130 AT2G23250.1 34.483 464 230 15 9 427 1 435 5.99e-73 236
Msa1088130 AT1G22360.1 29.448 489 248 16 1 418 5 467 7.02e-55 189
Msa1088130 AT1G22340.1 28.074 488 274 14 2 427 9 481 8.81e-52 181
Msa1088130 AT1G22360.2 28.425 489 241 15 1 418 5 455 1.07e-51 181
Msa1088130 AT2G28080.1 29.598 473 255 13 10 427 22 471 1.33e-49 175
Msa1088130 AT1G22370.2 29.012 486 266 16 2 427 9 475 3.85e-48 171
Msa1088130 AT1G22400.1 28.074 488 260 16 2 420 9 474 9.52e-48 171
Msa1088130 AT1G78270.1 30.328 488 262 18 2 427 9 480 2.53e-47 169
Msa1088130 AT1G22380.1 29.132 484 271 13 3 427 10 480 2.54e-46 167
Msa1088130 AT2G36970.1 27.572 486 263 14 6 427 10 470 2.79e-46 166
Msa1088130 AT2G30140.2 29.274 468 261 17 3 427 10 450 6.25e-45 162
Msa1088130 AT2G30140.1 29.274 468 262 17 3 427 10 451 4.53e-44 160
Msa1088130 AT2G30150.2 27.451 459 277 15 6 427 13 452 7.86e-42 154
Msa1088130 AT3G02100.1 26.271 472 269 15 6 425 13 457 5.75e-41 152
Msa1088130 AT2G30150.1 27.473 455 274 15 10 427 1 436 5.90e-41 151
Msa1088130 AT5G59580.1 27.021 470 274 15 1 427 4 447 1.43e-40 150
Msa1088130 AT5G38040.1 27.033 455 266 12 15 427 19 449 3.90e-40 149
Msa1088130 AT3G11340.1 25.702 463 272 14 8 427 11 444 3.51e-38 144
Msa1088130 AT3G46670.1 26.724 464 264 13 8 424 11 445 5.02e-38 143
Msa1088130 AT5G59590.1 26.293 464 274 14 7 427 11 449 5.66e-38 143
Msa1088130 AT5G38010.1 25.910 467 284 12 3 427 7 453 5.74e-38 143
Msa1088130 AT3G46650.1 26.452 465 259 13 1 423 5 428 1.08e-37 142
Msa1088130 AT3G46680.1 26.539 471 273 13 1 425 4 447 3.85e-37 141
Msa1088130 AT5G05860.1 28.998 469 252 18 8 427 11 447 4.69e-37 140
Msa1088130 AT3G46700.1 26.068 468 276 15 2 427 5 444 4.95e-37 140
Msa1088130 AT3G46660.1 26.415 477 257 13 8 427 16 455 9.31e-37 140
Msa1088130 AT2G36770.1 24.898 490 285 14 6 427 14 488 3.21e-36 139
Msa1088130 AT2G36800.1 25.667 487 286 16 6 427 12 487 5.21e-36 139
Msa1088130 AT2G36780.1 25.051 495 278 15 6 427 14 488 2.23e-35 137
Msa1088130 AT3G55700.1 27.137 468 276 14 3 427 5 450 1.25e-34 134
Msa1088130 AT5G05900.1 27.195 467 264 15 8 427 10 447 9.40e-34 131
Msa1088130 AT4G01070.1 27.195 467 284 12 2 421 4 461 1.34e-33 131
Msa1088130 AT5G05870.1 27.542 472 263 18 8 427 10 454 3.45e-33 130
Msa1088130 AT4G34138.1 27.600 500 252 17 6 427 11 478 4.48e-33 130
Msa1088130 AT3G53160.1 26.166 493 275 16 6 427 8 482 4.72e-33 130
Msa1088130 AT2G36750.1 23.541 497 282 17 6 427 10 483 7.36e-33 129
Msa1088130 AT3G46690.1 25.800 469 273 16 3 424 6 446 1.86e-32 128
Msa1088130 AT1G07260.1 25.813 492 279 15 1 427 1 471 2.14e-32 128
Msa1088130 AT1G10400.1 38.660 194 105 4 234 426 281 461 2.74e-32 127
Msa1088130 AT2G36760.1 24.948 485 291 14 6 427 14 488 3.07e-32 128
Msa1088130 AT2G15480.1 27.000 500 258 22 6 427 10 480 3.15e-32 128
Msa1088130 AT2G16890.2 41.117 197 101 7 235 427 282 467 5.52e-32 127
Msa1088130 AT3G55710.1 39.175 194 108 3 234 427 271 454 1.67e-31 125
Msa1088130 AT2G15480.2 26.719 509 258 22 6 427 10 490 1.77e-31 125
Msa1088130 AT3G46720.1 26.105 475 257 18 2 424 5 437 1.87e-31 125
Msa1088130 AT2G15490.3 36.500 200 115 5 233 427 285 477 4.38e-31 124
Msa1088130 AT5G14860.1 39.698 199 102 7 235 427 289 475 4.64e-31 124
Msa1088130 AT5G17050.1 35.897 195 110 5 233 427 277 456 4.69e-31 124
Msa1088130 AT3G53150.1 24.213 508 287 18 2 427 18 509 4.99e-31 125
Msa1088130 AT2G36790.1 24.490 490 287 15 6 427 13 487 7.93e-31 124
Msa1088130 AT3G21760.1 29.810 369 178 14 121 427 131 480 1.10e-30 123
Msa1088130 AT2G29730.1 24.684 474 295 11 3 427 2 462 2.69e-30 122
Msa1088130 AT1G22370.1 34.802 227 133 4 203 427 92 305 4.57e-30 119
Msa1088130 AT3G16520.3 28.125 352 179 12 129 424 123 456 5.39e-30 121
Msa1088130 AT2G15490.1 36.500 200 118 5 233 427 285 480 6.10e-30 121
Msa1088130 AT4G15280.1 24.845 483 287 15 7 427 5 473 6.65e-30 121
Msa1088130 AT4G15280.2 24.845 483 287 15 7 427 37 505 7.76e-30 121
Msa1088130 AT3G21750.1 24.948 481 286 13 6 427 4 468 8.37e-30 120
Msa1088130 AT4G34131.1 36.744 215 119 6 220 427 275 479 9.54e-30 120
Msa1088130 AT4G15260.1 28.652 356 195 12 121 427 9 354 1.05e-29 119
Msa1088130 AT1G01420.1 26.898 461 284 17 6 421 8 460 1.08e-29 120
Msa1088130 AT1G01420.2 26.898 461 284 17 6 421 11 463 1.19e-29 120
Msa1088130 AT2G29740.1 25.567 485 286 15 3 427 5 474 1.50e-29 120
Msa1088130 AT5G05880.1 35.533 197 117 3 231 427 262 448 2.10e-29 119
Msa1088130 AT2G29710.1 36.000 200 114 4 232 427 273 462 9.57e-29 117
Msa1088130 AT5G17030.1 33.333 195 115 5 233 427 276 455 1.95e-28 117
Msa1088130 AT1G07250.1 25.103 486 291 17 1 427 1 472 2.33e-28 117
Msa1088130 AT1G30530.1 35.897 195 110 5 233 427 271 450 2.50e-28 116
Msa1088130 AT5G12890.1 37.186 199 119 4 232 425 282 479 2.60e-28 117
Msa1088130 AT3G16520.2 28.037 321 161 11 129 393 123 429 4.95e-28 115
Msa1088130 AT3G21790.1 28.926 363 189 13 121 427 129 478 4.96e-28 116
Msa1088130 AT4G36770.1 36.842 190 100 4 234 410 264 446 5.35e-28 115
Msa1088130 AT3G16520.1 28.037 321 161 11 129 393 123 429 6.40e-28 115
Msa1088130 AT3G21800.1 26.061 495 267 17 7 427 6 475 6.60e-28 115
Msa1088130 AT3G21780.1 28.726 369 180 15 121 427 121 468 7.55e-28 115
Msa1088130 AT2G26480.1 25.000 472 266 16 8 427 10 445 1.23e-27 114
Msa1088130 AT5G17040.2 32.308 195 117 5 233 427 158 337 2.37e-27 112
Msa1088130 AT5G17040.1 32.308 195 117 5 233 427 260 439 3.05e-27 113
Msa1088130 AT3G50740.1 33.816 207 124 4 232 426 267 472 4.25e-27 113
Msa1088130 AT5G26310.1 34.500 200 115 5 234 420 264 460 2.24e-26 111
Msa1088130 AT4G34135.1 37.438 203 109 5 233 427 289 481 4.00e-26 110
Msa1088130 AT1G07240.1 34.135 208 113 7 232 427 280 475 4.34e-26 110
Msa1088130 AT1G06000.1 27.451 459 261 18 6 427 10 433 5.78e-26 109
Msa1088130 AT5G05890.1 34.343 198 118 4 231 427 266 452 6.17e-26 109
Msa1088130 AT5G66690.1 34.536 194 112 5 234 415 264 454 1.07e-25 109
Msa1088130 AT2G16890.3 44.218 147 69 5 235 378 282 418 1.64e-25 108
Msa1088130 AT1G73880.1 34.783 207 107 6 231 427 278 466 5.36e-25 107
Msa1088130 AT2G29750.1 25.410 488 282 17 3 427 5 473 9.93e-25 106
Msa1088130 AT3G22250.1 36.905 168 92 5 231 397 281 435 1.02e-24 106
Msa1088130 AT3G29630.2 24.565 460 268 13 1 427 1 414 3.88e-24 103
Msa1088130 AT2G18560.1 32.821 195 126 3 231 420 175 369 1.61e-23 101
Msa1088130 AT5G37950.2 27.758 281 144 11 101 341 78 339 3.60e-23 100
Msa1088130 AT5G37950.1 27.698 278 154 8 101 341 78 345 7.26e-23 99.4
Msa1088130 AT3G29630.1 23.750 480 273 13 1 427 1 440 1.30e-22 100
Msa1088130 AT2G18570.1 31.343 201 119 3 232 420 266 459 6.56e-22 98.2
Msa1088130 AT5G49690.1 24.773 440 275 15 6 405 10 433 1.39e-20 94.0
Msa1088130 AT5G03490.1 26.042 480 259 22 6 426 19 461 2.74e-20 93.2
Msa1088130 AT1G01390.2 31.313 198 127 4 234 424 286 481 3.92e-20 92.8
Msa1088130 AT1G01390.1 30.808 198 128 3 234 424 269 464 4.38e-20 92.8
Msa1088130 AT4G27560.1 23.517 472 276 16 7 427 6 443 5.80e-20 92.0
Msa1088130 AT2G23210.1 29.289 239 149 7 2 238 6 226 6.68e-20 89.7
Msa1088130 AT4G27570.1 23.093 472 278 16 7 427 6 443 2.36e-19 90.5
Msa1088130 AT5G53990.1 25.285 439 274 14 1 405 1 419 6.65e-19 89.0
Msa1088130 AT1G51210.1 24.747 396 223 15 6 354 20 387 1.02e-18 88.2
Msa1088130 AT5G54010.1 29.756 205 122 6 230 427 254 443 6.66e-18 85.9
Msa1088130 AT1G64910.1 24.130 460 293 16 1 427 1 437 2.42e-17 84.3
Msa1088130 AT5G65550.1 29.375 160 103 3 234 392 278 428 3.69e-17 84.0
Msa1088130 AT2G22590.1 30.682 176 109 4 234 405 282 448 1.40e-16 82.0
Msa1088130 AT1G50580.1 30.769 182 106 4 230 403 249 418 7.22e-15 76.6
Msa1088130 AT5G54060.1 28.358 201 131 5 230 425 272 464 9.31e-15 76.3
Msa1088130 AT2G22930.1 23.871 465 288 18 1 427 1 437 1.34e-14 75.9
Msa1088130 AT1G64920.1 22.609 460 304 15 1 427 1 441 2.22e-14 75.1
Msa1088130 AT4G09500.2 29.609 179 108 5 234 405 252 419 1.05e-12 70.1
Msa1088130 AT4G09500.1 29.609 179 108 5 234 405 227 394 1.19e-12 69.7

Find 101 sgRNAs with CRISPR-Local

Find 264 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTCAAGCGACTCGTTTCTT+TGG 0.198181 7_3:-1150194 Msa1088130:CDS
GAATTCAACAATGGAAAGTT+TGG 0.247532 7_3:-1149151 Msa1088130:CDS
GAACTTGAGAAGAATGTTAA+TGG 0.270365 7_3:-1149252 Msa1088130:CDS
GCACGTGCCTTGTTGGATTC+TGG 0.289746 7_3:-1149363 Msa1088130:CDS
AAACGAGTCGCTTGACGAAT+TGG 0.298468 7_3:+1150200 None:intergenic
CGTTGAAGAGTTTGAATTAG+AGG 0.326013 7_3:-1149621 Msa1088130:CDS
GTCAAGCGACTCGTTTCTTT+GGG 0.337578 7_3:-1150193 Msa1088130:CDS
GGGTTTATGTGACCTTGTAT+AGG 0.340710 7_3:+1150229 None:intergenic
CAAAGTTAGTTGAAGATTTG+TGG 0.341206 7_3:-1149074 Msa1088130:CDS
CAATGGAAAGTTTGGGTTCA+GGG 0.361422 7_3:-1149143 Msa1088130:CDS
ATGGAGAGGCCGGGAATGTT+TGG 0.367442 7_3:+1150115 None:intergenic
GGTTTATGTGACCTTGTATA+GGG 0.370942 7_3:+1150230 None:intergenic
ACAATGGAAAGTTTGGGTTC+AGG 0.374814 7_3:-1149144 Msa1088130:CDS
TGAGGAAATTAGAAAGTGTT+TGG 0.376286 7_3:-1149001 Msa1088130:CDS
TCTGTGGTTTATGTTTCATT+TGG 0.382887 7_3:-1149426 Msa1088130:CDS
TTAATGGGAAGATAGTTAAA+TGG 0.384922 7_3:-1149236 Msa1088130:CDS
CCTATACTCTCATTATTCCC+TGG 0.388111 7_3:-1149937 Msa1088130:CDS
GTTGAAGATTTGTGGAAGAC+TGG 0.391312 7_3:-1149066 Msa1088130:CDS
TCTTCAAATACATACACTTT+CGG 0.396722 7_3:-1149713 Msa1088130:CDS
AATTCAACAATGGAAAGTTT+GGG 0.397750 7_3:-1149150 Msa1088130:CDS
GAATGTTTGGTTTGTTGATA+AGG 0.402080 7_3:+1150128 None:intergenic
TGCTAAGAAATGGAAGAGTT+TGG 0.402723 7_3:-1148932 Msa1088130:CDS
GATAGTTAAATGGTGTTGTC+AGG 0.405884 7_3:-1149226 Msa1088130:CDS
TTTGGGTTCAGGGGTTCCTA+TGG 0.423229 7_3:-1149133 Msa1088130:CDS
TTAGGAGGAATGCTAAGAAA+TGG 0.426419 7_3:-1148942 Msa1088130:CDS
CGCTTGACGAATTGGAGAGC+AGG 0.432577 7_3:+1150208 None:intergenic
ATCAACAAACCAAACATTCC+CGG 0.444731 7_3:-1150124 Msa1088130:CDS
TTTGGCTAGGGAAGCTATGA+AGG 0.447318 7_3:-1148914 Msa1088130:CDS
GAAGGTGGCGATGGAGAGGC+CGG 0.456206 7_3:+1150105 None:intergenic
GGAAATTGCACGTGCCTTGT+TGG 0.467937 7_3:-1149370 Msa1088130:CDS
ACACGCCACCTTTGCGACCC+AGG 0.475455 7_3:+1149919 None:intergenic
ATATCATACTCTCCGCCAAA+CGG 0.476151 7_3:-1149985 Msa1088130:CDS
TTCTCTGACGGCTACGACGA+CGG 0.477742 7_3:-1150085 Msa1088130:CDS
AGTGTTTGGAAGTGGTTATG+AGG 0.479485 7_3:-1148987 Msa1088130:CDS
AATTAGAAAGTGTTTGGAAG+TGG 0.482297 7_3:-1148995 Msa1088130:CDS
AACTTGAGAAGAATGTTAAT+GGG 0.485428 7_3:-1149251 Msa1088130:CDS
ACGGTGTTAACAAGTACTCT+AGG 0.487152 7_3:+1149641 None:intergenic
TGAATCGACAATAGCGCTGA+TGG 0.491499 7_3:+1149884 None:intergenic
GAATGGACGATCTTCCCGTT+TGG 0.496413 7_3:+1149970 None:intergenic
CTATACTCTCATTATTCCCT+GGG 0.497209 7_3:-1149936 Msa1088130:CDS
TATGGTGGCGTTTCCTCAGT+GGG 0.501473 7_3:-1149115 Msa1088130:CDS
CCAGGGAATAATGAGAGTAT+AGG 0.507707 7_3:+1149937 None:intergenic
GTATAGGTCAAGCAAGTGAA+TGG 0.511593 7_3:+1149953 None:intergenic
GACCACATCGGCGTCGGTGT+CGG 0.513361 7_3:+1150054 None:intergenic
GGGTTCAGGGGTTCCTATGG+TGG 0.516683 7_3:-1149130 Msa1088130:CDS
TGGACGATCTTCCCGTTTGG+CGG 0.517343 7_3:+1149973 None:intergenic
CACGCCACCTTTGCGACCCA+GGG 0.532660 7_3:+1149920 None:intergenic
TATCATACTCTCCGCCAAAC+GGG 0.534134 7_3:-1149984 Msa1088130:CDS
AATGGAAAGTTTGGGTTCAG+GGG 0.556415 7_3:-1149142 Msa1088130:CDS
GTTAACAAGTACTCTAGGGT+TGG 0.560226 7_3:+1149646 None:intergenic
TTGAAGATTTGTGGAAGACT+GGG 0.562305 7_3:-1149065 Msa1088130:CDS
ACTAAGAGCGCCGTTGATGT+TGG 0.564271 7_3:-1149597 Msa1088130:intron
GCTTTATGACACATTGTGGA+TGG 0.567974 7_3:-1149173 Msa1088130:CDS
GCCGTCAGAGAAGGTGGCGA+TGG 0.571590 7_3:+1150096 None:intergenic
CATTATTCCCTGGGTCGCAA+AGG 0.574190 7_3:-1149927 Msa1088130:CDS
GGTATGTTATGATGAGGAAG+TGG 0.575719 7_3:+1150251 None:intergenic
TGAGCTCAAGCGTCGCAGCT+CGG 0.575768 7_3:-1150020 Msa1088130:CDS
TATTCCCTGGGTCGCAAAGG+TGG 0.575778 7_3:-1149924 Msa1088130:CDS
CGGTGTTAACAAGTACTCTA+GGG 0.579542 7_3:+1149642 None:intergenic
CAGAGAAGGTGGCGATGGAG+AGG 0.579666 7_3:+1150101 None:intergenic
TATTATTACTTTCATGAACA+CGG 0.579989 7_3:-1149836 Msa1088130:CDS
ATGTTATGATGAGGAAGTGG+TGG 0.581298 7_3:+1150254 None:intergenic
GCTTGACGAATTGGAGAGCA+GGG 0.583287 7_3:+1150209 None:intergenic
AGAAATGGAAGAGTTTGGCT+AGG 0.589596 7_3:-1148927 Msa1088130:CDS
ACGCTTGAGCTCAGACATGT+AGG 0.591000 7_3:+1150030 None:intergenic
AGTTAAATGGTGTTGTCAGG+TGG 0.592437 7_3:-1149223 Msa1088130:CDS
GTCGTAGCCGTCAGAGAAGG+TGG 0.597634 7_3:+1150090 None:intergenic
GAATCGACAATAGCGCTGAT+GGG 0.600237 7_3:+1149885 None:intergenic
TTCAAAGGATGAATCGTCTG+TGG 0.600647 7_3:-1149442 Msa1088130:intron
GAAATGGAAGAGTTTGGCTA+GGG 0.600830 7_3:-1148926 Msa1088130:CDS
GTCGTCGTAGCCGTCAGAGA+AGG 0.601166 7_3:+1150087 None:intergenic
TGTTTGGTTTGTTGATAAGG+CGG 0.602577 7_3:+1150131 None:intergenic
CTATGGTGGCGTTTCCTCAG+TGG 0.602752 7_3:-1149116 Msa1088130:CDS
CTCTAATTCAAACTCTTCAA+CGG 0.605056 7_3:+1149622 None:intergenic
ATCCGACACCGACGCCGATG+TGG 0.605316 7_3:-1150056 Msa1088130:CDS
GGTTGCTTTATGACACATTG+TGG 0.608403 7_3:-1149177 Msa1088130:CDS
TCCATCGCCACCTTCTCTGA+CGG 0.609289 7_3:-1150097 Msa1088130:CDS
GATGAAACGTGATGATGAAG+TGG 0.616120 7_3:-1149037 Msa1088130:CDS
GCTAGGGAAGCTATGAAGGA+AGG 0.617757 7_3:-1148910 Msa1088130:CDS
ATTTGTGGAAGACTGGGGTG+AGG 0.619099 7_3:-1149059 Msa1088130:CDS
CACTGAGGAAACGCCACCAT+AGG 0.619617 7_3:+1149117 None:intergenic
AGGGAAGCTATGAAGGAAGG+AGG 0.623766 7_3:-1148907 Msa1088130:CDS
ATTGTCGATTCAAGCAGCAA+CGG 0.624470 7_3:-1149873 Msa1088130:CDS
ATCATAACATACCCTATACA+AGG 0.624584 7_3:-1150241 Msa1088130:CDS
AAGGTGGCGATGGAGAGGCC+GGG 0.625536 7_3:+1150106 None:intergenic
GGGAAGCTATGAAGGAAGGA+GGG 0.629024 7_3:-1148906 Msa1088130:CDS
ATGAAACGTGATGATGAAGT+GGG 0.641470 7_3:-1149036 Msa1088130:CDS
TTGTGGATGGAATTCAACAA+TGG 0.642756 7_3:-1149160 Msa1088130:CDS
TTTGTCTAAGAGACAAATGG+AGG 0.650404 7_3:-1149391 Msa1088130:CDS
TGACGAGTTGAGTTGTAGAG+AGG 0.652695 7_3:-1149274 Msa1088130:CDS
GTATAGGGTATGTTATGATG+AGG 0.652995 7_3:+1150245 None:intergenic
ACGAGTTTGATAGAGCTGCA+TGG 0.654344 7_3:-1149782 Msa1088130:CDS
CTACATCACAAACAAATCAG+AGG 0.658392 7_3:-1149810 Msa1088130:CDS
TGAAGATTTGTGGAAGACTG+GGG 0.659774 7_3:-1149064 Msa1088130:CDS
TCGACAATAGCGCTGATGGG+AGG 0.662630 7_3:+1149888 None:intergenic
AGTGGGAATAGTGAAAGCTG+AGG 0.674038 7_3:-1149019 Msa1088130:CDS
GTAGGTGACCACATCGGCGT+CGG 0.675153 7_3:+1150048 None:intergenic
AGAAAATCCAGAATCCAACA+AGG 0.700578 7_3:+1149356 None:intergenic
GTAGTTTGATCTGCCCACTG+AGG 0.717513 7_3:+1149102 None:intergenic
GCGGTTGTGTAAGTAAACAG+TGG 0.718688 7_3:+1150150 None:intergenic
AGACATGTAGGTGACCACAT+CGG 0.729157 7_3:+1150042 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTGAAGATAATAAAAATGA+GGG + chr7_3:1149404-1149423 None:intergenic 15.0%
!! ATTTGAAGATAATAAAAATG+AGG + chr7_3:1149405-1149424 None:intergenic 15.0%
!! TTTGAAGATAATAAAAATGA+GGG + chr7_3:1149404-1149423 None:intergenic 15.0%
!! ATTTGAAGATAATAAAAATG+AGG + chr7_3:1149405-1149424 None:intergenic 15.0%
!! TATTATTACTTTCATGAACA+CGG - chr7_3:1149293-1149312 Msa1088130:CDS 20.0%
!! TATTATTACTTTCATGAACA+CGG - chr7_3:1149293-1149312 Msa1088130:CDS 20.0%
! AAGATAATAAAAATGAGGGA+AGG + chr7_3:1149400-1149419 None:intergenic 25.0%
! TCTTCAAATACATACACTTT+CGG - chr7_3:1149416-1149435 Msa1088130:CDS 25.0%
!! TTTTATCTTACCAACATCAA+CGG + chr7_3:1149545-1149564 None:intergenic 25.0%
! AAGATAAAAATGATACCCAT+CGG - chr7_3:1149556-1149575 Msa1088130:intron 25.0%
! AACTTGAGAAGAATGTTAAT+GGG - chr7_3:1149878-1149897 Msa1088130:CDS 25.0%
! TTAATGGGAAGATAGTTAAA+TGG - chr7_3:1149893-1149912 Msa1088130:CDS 25.0%
! AATTCAACAATGGAAAGTTT+GGG - chr7_3:1149979-1149998 Msa1088130:CDS 25.0%
! AAGATAATAAAAATGAGGGA+AGG + chr7_3:1149400-1149419 None:intergenic 25.0%
! TCTTCAAATACATACACTTT+CGG - chr7_3:1149416-1149435 Msa1088130:CDS 25.0%
!! TTTTATCTTACCAACATCAA+CGG + chr7_3:1149545-1149564 None:intergenic 25.0%
! AAGATAAAAATGATACCCAT+CGG - chr7_3:1149556-1149575 Msa1088130:intron 25.0%
! AACTTGAGAAGAATGTTAAT+GGG - chr7_3:1149878-1149897 Msa1088130:CDS 25.0%
! TTAATGGGAAGATAGTTAAA+TGG - chr7_3:1149893-1149912 Msa1088130:CDS 25.0%
! AATTCAACAATGGAAAGTTT+GGG - chr7_3:1149979-1149998 Msa1088130:CDS 25.0%
ATCATAACATACCCTATACA+AGG - chr7_3:1148888-1148907 Msa1088130:CDS 30.0%
!! GAATGTTTGGTTTGTTGATA+AGG + chr7_3:1149004-1149023 None:intergenic 30.0%
CTCTAATTCAAACTCTTCAA+CGG + chr7_3:1149510-1149529 None:intergenic 30.0%
GATCCTAATGATACTTCATT+TGG - chr7_3:1149613-1149632 Msa1088130:CDS 30.0%
TGATAATTACCTTGAATGGT+TGG - chr7_3:1149663-1149682 Msa1088130:CDS 30.0%
TCTGTGGTTTATGTTTCATT+TGG - chr7_3:1149703-1149722 Msa1088130:CDS 30.0%
! TGTTTTGTCTAAGAGACAAA+TGG - chr7_3:1149735-1149754 Msa1088130:CDS 30.0%
! ATTCTGGATTTTCTTTCTTG+TGG - chr7_3:1149782-1149801 Msa1088130:CDS 30.0%
! TTCTGGATTTTCTTTCTTGT+GGG - chr7_3:1149783-1149802 Msa1088130:CDS 30.0%
AATGCAACAAAAAGAAGATG+AGG - chr7_3:1149825-1149844 Msa1088130:CDS 30.0%
ATGCAACAAAAAGAAGATGA+GGG - chr7_3:1149826-1149845 Msa1088130:CDS 30.0%
GAACTTGAGAAGAATGTTAA+TGG - chr7_3:1149877-1149896 Msa1088130:CDS 30.0%
! GTTTTGTCACATAGTTCTTT+AGG - chr7_3:1149931-1149950 Msa1088130:CDS 30.0%
GAATTCAACAATGGAAAGTT+TGG - chr7_3:1149978-1149997 Msa1088130:CDS 30.0%
CAAAGTTAGTTGAAGATTTG+TGG - chr7_3:1150055-1150074 Msa1088130:CDS 30.0%
!! TGAGGAAATTAGAAAGTGTT+TGG - chr7_3:1150128-1150147 Msa1088130:CDS 30.0%
!! AATTAGAAAGTGTTTGGAAG+TGG - chr7_3:1150134-1150153 Msa1088130:CDS 30.0%
ATCATAACATACCCTATACA+AGG - chr7_3:1148888-1148907 Msa1088130:CDS 30.0%
!! GAATGTTTGGTTTGTTGATA+AGG + chr7_3:1149004-1149023 None:intergenic 30.0%
CTCTAATTCAAACTCTTCAA+CGG + chr7_3:1149510-1149529 None:intergenic 30.0%
GATCCTAATGATACTTCATT+TGG - chr7_3:1149613-1149632 Msa1088130:CDS 30.0%
TGATAATTACCTTGAATGGT+TGG - chr7_3:1149663-1149682 Msa1088130:CDS 30.0%
TCTGTGGTTTATGTTTCATT+TGG - chr7_3:1149703-1149722 Msa1088130:CDS 30.0%
! TGTTTTGTCTAAGAGACAAA+TGG - chr7_3:1149735-1149754 Msa1088130:CDS 30.0%
! ATTCTGGATTTTCTTTCTTG+TGG - chr7_3:1149782-1149801 Msa1088130:CDS 30.0%
! TTCTGGATTTTCTTTCTTGT+GGG - chr7_3:1149783-1149802 Msa1088130:CDS 30.0%
AATGCAACAAAAAGAAGATG+AGG - chr7_3:1149825-1149844 Msa1088130:CDS 30.0%
ATGCAACAAAAAGAAGATGA+GGG - chr7_3:1149826-1149845 Msa1088130:CDS 30.0%
GAACTTGAGAAGAATGTTAA+TGG - chr7_3:1149877-1149896 Msa1088130:CDS 30.0%
! GTTTTGTCACATAGTTCTTT+AGG - chr7_3:1149931-1149950 Msa1088130:CDS 30.0%
GAATTCAACAATGGAAAGTT+TGG - chr7_3:1149978-1149997 Msa1088130:CDS 30.0%
CAAAGTTAGTTGAAGATTTG+TGG - chr7_3:1150055-1150074 Msa1088130:CDS 30.0%
!! TGAGGAAATTAGAAAGTGTT+TGG - chr7_3:1150128-1150147 Msa1088130:CDS 30.0%
!! AATTAGAAAGTGTTTGGAAG+TGG - chr7_3:1150134-1150153 Msa1088130:CDS 30.0%
GTATAGGGTATGTTATGATG+AGG + chr7_3:1148887-1148906 None:intergenic 35.0%
GGTTTATGTGACCTTGTATA+GGG + chr7_3:1148902-1148921 None:intergenic 35.0%
!! TGTTTGGTTTGTTGATAAGG+CGG + chr7_3:1149001-1149020 None:intergenic 35.0%
ATCAACAAACCAAACATTCC+CGG - chr7_3:1149005-1149024 Msa1088130:CDS 35.0%
CTATACTCTCATTATTCCCT+GGG - chr7_3:1149193-1149212 Msa1088130:CDS 35.0%
CTACATCACAAACAAATCAG+AGG - chr7_3:1149319-1149338 Msa1088130:CDS 35.0%
CGTTGAAGAGTTTGAATTAG+AGG - chr7_3:1149508-1149527 Msa1088130:intron 35.0%
AAGAAAGCAGATGGAATCAA+CGG + chr7_3:1149583-1149602 None:intergenic 35.0%
! GCACCAAATGAAGTATCATT+AGG + chr7_3:1149619-1149638 None:intergenic 35.0%
CATTCAAGGTAATTATCACC+TGG + chr7_3:1149661-1149680 None:intergenic 35.0%
CAGGTGATAATTACCTTGAA+TGG - chr7_3:1149659-1149678 Msa1088130:CDS 35.0%
TTTGTCTAAGAGACAAATGG+AGG - chr7_3:1149738-1149757 Msa1088130:CDS 35.0%
AGAAAATCCAGAATCCAACA+AGG + chr7_3:1149776-1149795 None:intergenic 35.0%
!! GATAGTTAAATGGTGTTGTC+AGG - chr7_3:1149903-1149922 Msa1088130:CDS 35.0%
TTGTGGATGGAATTCAACAA+TGG - chr7_3:1149969-1149988 Msa1088130:CDS 35.0%
TTGAAGATTTGTGGAAGACT+GGG - chr7_3:1150064-1150083 Msa1088130:CDS 35.0%
! ATGAAACGTGATGATGAAGT+GGG - chr7_3:1150093-1150112 Msa1088130:CDS 35.0%
GAGAAAAAAGAGAGGAACTT+AGG - chr7_3:1150169-1150188 Msa1088130:CDS 35.0%
AAAAAAGAGAGGAACTTAGG+AGG - chr7_3:1150172-1150191 Msa1088130:CDS 35.0%
TTAGGAGGAATGCTAAGAAA+TGG - chr7_3:1150187-1150206 Msa1088130:CDS 35.0%
TGCTAAGAAATGGAAGAGTT+TGG - chr7_3:1150197-1150216 Msa1088130:CDS 35.0%
GTATAGGGTATGTTATGATG+AGG + chr7_3:1148887-1148906 None:intergenic 35.0%
GGTTTATGTGACCTTGTATA+GGG + chr7_3:1148902-1148921 None:intergenic 35.0%
!! TGTTTGGTTTGTTGATAAGG+CGG + chr7_3:1149001-1149020 None:intergenic 35.0%
ATCAACAAACCAAACATTCC+CGG - chr7_3:1149005-1149024 Msa1088130:CDS 35.0%
CTATACTCTCATTATTCCCT+GGG - chr7_3:1149193-1149212 Msa1088130:CDS 35.0%
CTACATCACAAACAAATCAG+AGG - chr7_3:1149319-1149338 Msa1088130:CDS 35.0%
CGTTGAAGAGTTTGAATTAG+AGG - chr7_3:1149508-1149527 Msa1088130:intron 35.0%
AAGAAAGCAGATGGAATCAA+CGG + chr7_3:1149583-1149602 None:intergenic 35.0%
! GCACCAAATGAAGTATCATT+AGG + chr7_3:1149619-1149638 None:intergenic 35.0%
CATTCAAGGTAATTATCACC+TGG + chr7_3:1149661-1149680 None:intergenic 35.0%
CAGGTGATAATTACCTTGAA+TGG - chr7_3:1149659-1149678 Msa1088130:CDS 35.0%
TTTGTCTAAGAGACAAATGG+AGG - chr7_3:1149738-1149757 Msa1088130:CDS 35.0%
AGAAAATCCAGAATCCAACA+AGG + chr7_3:1149776-1149795 None:intergenic 35.0%
!! GATAGTTAAATGGTGTTGTC+AGG - chr7_3:1149903-1149922 Msa1088130:CDS 35.0%
TTGTGGATGGAATTCAACAA+TGG - chr7_3:1149969-1149988 Msa1088130:CDS 35.0%
TTGAAGATTTGTGGAAGACT+GGG - chr7_3:1150064-1150083 Msa1088130:CDS 35.0%
! ATGAAACGTGATGATGAAGT+GGG - chr7_3:1150093-1150112 Msa1088130:CDS 35.0%
GAGAAAAAAGAGAGGAACTT+AGG - chr7_3:1150169-1150188 Msa1088130:CDS 35.0%
AAAAAAGAGAGGAACTTAGG+AGG - chr7_3:1150172-1150191 Msa1088130:CDS 35.0%
TTAGGAGGAATGCTAAGAAA+TGG - chr7_3:1150187-1150206 Msa1088130:CDS 35.0%
TGCTAAGAAATGGAAGAGTT+TGG - chr7_3:1150197-1150216 Msa1088130:CDS 35.0%
ATGTTATGATGAGGAAGTGG+TGG + chr7_3:1148878-1148897 None:intergenic 40.0%
GGTATGTTATGATGAGGAAG+TGG + chr7_3:1148881-1148900 None:intergenic 40.0%
GGGTTTATGTGACCTTGTAT+AGG + chr7_3:1148903-1148922 None:intergenic 40.0%
ATATCATACTCTCCGCCAAA+CGG - chr7_3:1149144-1149163 Msa1088130:CDS 40.0%
GTATAGGTCAAGCAAGTGAA+TGG + chr7_3:1149179-1149198 None:intergenic 40.0%
! CCAGGGAATAATGAGAGTAT+AGG + chr7_3:1149195-1149214 None:intergenic 40.0%
CCTATACTCTCATTATTCCC+TGG - chr7_3:1149192-1149211 Msa1088130:CDS 40.0%
!! ATTGTCGATTCAAGCAGCAA+CGG - chr7_3:1149256-1149275 Msa1088130:CDS 40.0%
!! GTTAACAAGTACTCTAGGGT+TGG + chr7_3:1149486-1149505 None:intergenic 40.0%
! CGGTGTTAACAAGTACTCTA+GGG + chr7_3:1149490-1149509 None:intergenic 40.0%
! ACGGTGTTAACAAGTACTCT+AGG + chr7_3:1149491-1149510 None:intergenic 40.0%
! GTTGATTCCATCTGCTTTCT+TGG - chr7_3:1149582-1149601 Msa1088130:intron 40.0%
ATTCCATCTGCTTTCTTGGA+CGG - chr7_3:1149586-1149605 Msa1088130:intron 40.0%
AATTATCACCTGGCTCAACA+CGG + chr7_3:1149651-1149670 None:intergenic 40.0%
!! CCTTTGAAACCAACCATTCA+AGG + chr7_3:1149675-1149694 None:intergenic 40.0%
!! CCTTGAATGGTTGGTTTCAA+AGG - chr7_3:1149672-1149691 Msa1088130:CDS 40.0%
TTCAAAGGATGAATCGTCTG+TGG - chr7_3:1149687-1149706 Msa1088130:CDS 40.0%
CAACAAAAAGAAGATGAGGG+TGG - chr7_3:1149829-1149848 Msa1088130:CDS 40.0%
!! AGTTAAATGGTGTTGTCAGG+TGG - chr7_3:1149906-1149925 Msa1088130:CDS 40.0%
! GGTTGCTTTATGACACATTG+TGG - chr7_3:1149952-1149971 Msa1088130:CDS 40.0%
GCTTTATGACACATTGTGGA+TGG - chr7_3:1149956-1149975 Msa1088130:CDS 40.0%
! ACAATGGAAAGTTTGGGTTC+AGG - chr7_3:1149985-1150004 Msa1088130:CDS 40.0%
! CAATGGAAAGTTTGGGTTCA+GGG - chr7_3:1149986-1150005 Msa1088130:CDS 40.0%
! AATGGAAAGTTTGGGTTCAG+GGG - chr7_3:1149987-1150006 Msa1088130:CDS 40.0%
GTTGAAGATTTGTGGAAGAC+TGG - chr7_3:1150063-1150082 Msa1088130:CDS 40.0%
TGAAGATTTGTGGAAGACTG+GGG - chr7_3:1150065-1150084 Msa1088130:CDS 40.0%
! GATGAAACGTGATGATGAAG+TGG - chr7_3:1150092-1150111 Msa1088130:CDS 40.0%
AGTGTTTGGAAGTGGTTATG+AGG - chr7_3:1150142-1150161 Msa1088130:CDS 40.0%
GAGGAAGAGAGAAAAAAGAG+AGG - chr7_3:1150161-1150180 Msa1088130:CDS 40.0%
AGAAATGGAAGAGTTTGGCT+AGG - chr7_3:1150202-1150221 Msa1088130:CDS 40.0%
GAAATGGAAGAGTTTGGCTA+GGG - chr7_3:1150203-1150222 Msa1088130:CDS 40.0%
ATGTTATGATGAGGAAGTGG+TGG + chr7_3:1148878-1148897 None:intergenic 40.0%
GGTATGTTATGATGAGGAAG+TGG + chr7_3:1148881-1148900 None:intergenic 40.0%
GGGTTTATGTGACCTTGTAT+AGG + chr7_3:1148903-1148922 None:intergenic 40.0%
ATATCATACTCTCCGCCAAA+CGG - chr7_3:1149144-1149163 Msa1088130:CDS 40.0%
GTATAGGTCAAGCAAGTGAA+TGG + chr7_3:1149179-1149198 None:intergenic 40.0%
! CCAGGGAATAATGAGAGTAT+AGG + chr7_3:1149195-1149214 None:intergenic 40.0%
CCTATACTCTCATTATTCCC+TGG - chr7_3:1149192-1149211 Msa1088130:CDS 40.0%
!! ATTGTCGATTCAAGCAGCAA+CGG - chr7_3:1149256-1149275 Msa1088130:CDS 40.0%
!! GTTAACAAGTACTCTAGGGT+TGG + chr7_3:1149486-1149505 None:intergenic 40.0%
! CGGTGTTAACAAGTACTCTA+GGG + chr7_3:1149490-1149509 None:intergenic 40.0%
! ACGGTGTTAACAAGTACTCT+AGG + chr7_3:1149491-1149510 None:intergenic 40.0%
! GTTGATTCCATCTGCTTTCT+TGG - chr7_3:1149582-1149601 Msa1088130:intron 40.0%
ATTCCATCTGCTTTCTTGGA+CGG - chr7_3:1149586-1149605 Msa1088130:intron 40.0%
AATTATCACCTGGCTCAACA+CGG + chr7_3:1149651-1149670 None:intergenic 40.0%
!! CCTTTGAAACCAACCATTCA+AGG + chr7_3:1149675-1149694 None:intergenic 40.0%
!! CCTTGAATGGTTGGTTTCAA+AGG - chr7_3:1149672-1149691 Msa1088130:CDS 40.0%
TTCAAAGGATGAATCGTCTG+TGG - chr7_3:1149687-1149706 Msa1088130:CDS 40.0%
CAACAAAAAGAAGATGAGGG+TGG - chr7_3:1149829-1149848 Msa1088130:CDS 40.0%
!! AGTTAAATGGTGTTGTCAGG+TGG - chr7_3:1149906-1149925 Msa1088130:CDS 40.0%
! GGTTGCTTTATGACACATTG+TGG - chr7_3:1149952-1149971 Msa1088130:CDS 40.0%
GCTTTATGACACATTGTGGA+TGG - chr7_3:1149956-1149975 Msa1088130:CDS 40.0%
! ACAATGGAAAGTTTGGGTTC+AGG - chr7_3:1149985-1150004 Msa1088130:CDS 40.0%
! CAATGGAAAGTTTGGGTTCA+GGG - chr7_3:1149986-1150005 Msa1088130:CDS 40.0%
! AATGGAAAGTTTGGGTTCAG+GGG - chr7_3:1149987-1150006 Msa1088130:CDS 40.0%
GTTGAAGATTTGTGGAAGAC+TGG - chr7_3:1150063-1150082 Msa1088130:CDS 40.0%
TGAAGATTTGTGGAAGACTG+GGG - chr7_3:1150065-1150084 Msa1088130:CDS 40.0%
! GATGAAACGTGATGATGAAG+TGG - chr7_3:1150092-1150111 Msa1088130:CDS 40.0%
AGTGTTTGGAAGTGGTTATG+AGG - chr7_3:1150142-1150161 Msa1088130:CDS 40.0%
GAGGAAGAGAGAAAAAAGAG+AGG - chr7_3:1150161-1150180 Msa1088130:CDS 40.0%
AGAAATGGAAGAGTTTGGCT+AGG - chr7_3:1150202-1150221 Msa1088130:CDS 40.0%
GAAATGGAAGAGTTTGGCTA+GGG - chr7_3:1150203-1150222 Msa1088130:CDS 40.0%
AAACGAGTCGCTTGACGAAT+TGG + chr7_3:1148932-1148951 None:intergenic 45.0%
GTCAAGCGACTCGTTTCTTT+GGG - chr7_3:1148936-1148955 Msa1088130:CDS 45.0%
GCGGTTGTGTAAGTAAACAG+TGG + chr7_3:1148982-1149001 None:intergenic 45.0%
AGACATGTAGGTGACCACAT+CGG + chr7_3:1149090-1149109 None:intergenic 45.0%
TATCATACTCTCCGCCAAAC+GGG - chr7_3:1149145-1149164 Msa1088130:CDS 45.0%
!! GAATCGACAATAGCGCTGAT+GGG + chr7_3:1149247-1149266 None:intergenic 45.0%
! TGAATCGACAATAGCGCTGA+TGG + chr7_3:1149248-1149267 None:intergenic 45.0%
ACGAGTTTGATAGAGCTGCA+TGG - chr7_3:1149347-1149366 Msa1088130:CDS 45.0%
!! TCGCGACTTTTGAGTGAGAA+TGG + chr7_3:1149377-1149396 None:intergenic 45.0%
TTACCGTCCAAGAAAGCAGA+TGG + chr7_3:1149592-1149611 None:intergenic 45.0%
! TGACGAGTTGAGTTGTAGAG+AGG - chr7_3:1149855-1149874 Msa1088130:CDS 45.0%
AGTGGGAATAGTGAAAGCTG+AGG - chr7_3:1150110-1150129 Msa1088130:CDS 45.0%
TTTGGCTAGGGAAGCTATGA+AGG - chr7_3:1150215-1150234 Msa1088130:CDS 45.0%
AAACGAGTCGCTTGACGAAT+TGG + chr7_3:1148932-1148951 None:intergenic 45.0%
GTCAAGCGACTCGTTTCTTT+GGG - chr7_3:1148936-1148955 Msa1088130:CDS 45.0%
GCGGTTGTGTAAGTAAACAG+TGG + chr7_3:1148982-1149001 None:intergenic 45.0%
AGACATGTAGGTGACCACAT+CGG + chr7_3:1149090-1149109 None:intergenic 45.0%
TATCATACTCTCCGCCAAAC+GGG - chr7_3:1149145-1149164 Msa1088130:CDS 45.0%
!! GAATCGACAATAGCGCTGAT+GGG + chr7_3:1149247-1149266 None:intergenic 45.0%
! TGAATCGACAATAGCGCTGA+TGG + chr7_3:1149248-1149267 None:intergenic 45.0%
ACGAGTTTGATAGAGCTGCA+TGG - chr7_3:1149347-1149366 Msa1088130:CDS 45.0%
!! TCGCGACTTTTGAGTGAGAA+TGG + chr7_3:1149377-1149396 None:intergenic 45.0%
TTACCGTCCAAGAAAGCAGA+TGG + chr7_3:1149592-1149611 None:intergenic 45.0%
! TGACGAGTTGAGTTGTAGAG+AGG - chr7_3:1149855-1149874 Msa1088130:CDS 45.0%
AGTGGGAATAGTGAAAGCTG+AGG - chr7_3:1150110-1150129 Msa1088130:CDS 45.0%
TTTGGCTAGGGAAGCTATGA+AGG - chr7_3:1150215-1150234 Msa1088130:CDS 45.0%
GCTTGACGAATTGGAGAGCA+GGG + chr7_3:1148923-1148942 None:intergenic 50.0%
CGTCAAGCGACTCGTTTCTT+TGG - chr7_3:1148935-1148954 Msa1088130:CDS 50.0%
ACGCTTGAGCTCAGACATGT+AGG + chr7_3:1149102-1149121 None:intergenic 50.0%
GAATGGACGATCTTCCCGTT+TGG + chr7_3:1149162-1149181 None:intergenic 50.0%
CATTATTCCCTGGGTCGCAA+AGG - chr7_3:1149202-1149221 Msa1088130:CDS 50.0%
!! ACTAAGAGCGCCGTTGATGT+TGG - chr7_3:1149532-1149551 Msa1088130:intron 50.0%
GATGGAATCAACGGTCCGAT+GGG + chr7_3:1149574-1149593 None:intergenic 50.0%
AGATGGAATCAACGGTCCGA+TGG + chr7_3:1149575-1149594 None:intergenic 50.0%
GGAAATTGCACGTGCCTTGT+TGG - chr7_3:1149759-1149778 Msa1088130:CDS 50.0%
! TTTGGGTTCAGGGGTTCCTA+TGG - chr7_3:1149996-1150015 Msa1088130:CDS 50.0%
! TATGGTGGCGTTTCCTCAGT+GGG - chr7_3:1150014-1150033 Msa1088130:CDS 50.0%
GTAGTTTGATCTGCCCACTG+AGG + chr7_3:1150030-1150049 None:intergenic 50.0%
ATTTGTGGAAGACTGGGGTG+AGG - chr7_3:1150070-1150089 Msa1088130:CDS 50.0%
GCTAGGGAAGCTATGAAGGA+AGG - chr7_3:1150219-1150238 Msa1088130:CDS 50.0%
AGGGAAGCTATGAAGGAAGG+AGG - chr7_3:1150222-1150241 Msa1088130:CDS 50.0%
GGGAAGCTATGAAGGAAGGA+GGG - chr7_3:1150223-1150242 Msa1088130:CDS 50.0%
GCTTGACGAATTGGAGAGCA+GGG + chr7_3:1148923-1148942 None:intergenic 50.0%
CGTCAAGCGACTCGTTTCTT+TGG - chr7_3:1148935-1148954 Msa1088130:CDS 50.0%
ACGCTTGAGCTCAGACATGT+AGG + chr7_3:1149102-1149121 None:intergenic 50.0%
GAATGGACGATCTTCCCGTT+TGG + chr7_3:1149162-1149181 None:intergenic 50.0%
CATTATTCCCTGGGTCGCAA+AGG - chr7_3:1149202-1149221 Msa1088130:CDS 50.0%
!! ACTAAGAGCGCCGTTGATGT+TGG - chr7_3:1149532-1149551 Msa1088130:intron 50.0%
GATGGAATCAACGGTCCGAT+GGG + chr7_3:1149574-1149593 None:intergenic 50.0%
AGATGGAATCAACGGTCCGA+TGG + chr7_3:1149575-1149594 None:intergenic 50.0%
GGAAATTGCACGTGCCTTGT+TGG - chr7_3:1149759-1149778 Msa1088130:CDS 50.0%
! TTTGGGTTCAGGGGTTCCTA+TGG - chr7_3:1149996-1150015 Msa1088130:CDS 50.0%
! TATGGTGGCGTTTCCTCAGT+GGG - chr7_3:1150014-1150033 Msa1088130:CDS 50.0%
GTAGTTTGATCTGCCCACTG+AGG + chr7_3:1150030-1150049 None:intergenic 50.0%
ATTTGTGGAAGACTGGGGTG+AGG - chr7_3:1150070-1150089 Msa1088130:CDS 50.0%
GCTAGGGAAGCTATGAAGGA+AGG - chr7_3:1150219-1150238 Msa1088130:CDS 50.0%
AGGGAAGCTATGAAGGAAGG+AGG - chr7_3:1150222-1150241 Msa1088130:CDS 50.0%
GGGAAGCTATGAAGGAAGGA+GGG - chr7_3:1150223-1150242 Msa1088130:CDS 50.0%
CGCTTGACGAATTGGAGAGC+AGG + chr7_3:1148924-1148943 None:intergenic 55.0%
ATGGAGAGGCCGGGAATGTT+TGG + chr7_3:1149017-1149036 None:intergenic 55.0%
TCCATCGCCACCTTCTCTGA+CGG - chr7_3:1149032-1149051 Msa1088130:CDS 55.0%
TTCTCTGACGGCTACGACGA+CGG - chr7_3:1149044-1149063 Msa1088130:CDS 55.0%
TGGACGATCTTCCCGTTTGG+CGG + chr7_3:1149159-1149178 None:intergenic 55.0%
TATTCCCTGGGTCGCAAAGG+TGG - chr7_3:1149205-1149224 Msa1088130:CDS 55.0%
!! TCGACAATAGCGCTGATGGG+AGG + chr7_3:1149244-1149263 None:intergenic 55.0%
! GCACGTGCCTTGTTGGATTC+TGG - chr7_3:1149766-1149785 Msa1088130:CDS 55.0%
CACTGAGGAAACGCCACCAT+AGG + chr7_3:1150015-1150034 None:intergenic 55.0%
! CTATGGTGGCGTTTCCTCAG+TGG - chr7_3:1150013-1150032 Msa1088130:CDS 55.0%
CGCTTGACGAATTGGAGAGC+AGG + chr7_3:1148924-1148943 None:intergenic 55.0%
ATGGAGAGGCCGGGAATGTT+TGG + chr7_3:1149017-1149036 None:intergenic 55.0%
TCCATCGCCACCTTCTCTGA+CGG - chr7_3:1149032-1149051 Msa1088130:CDS 55.0%
TTCTCTGACGGCTACGACGA+CGG - chr7_3:1149044-1149063 Msa1088130:CDS 55.0%
TGGACGATCTTCCCGTTTGG+CGG + chr7_3:1149159-1149178 None:intergenic 55.0%
TATTCCCTGGGTCGCAAAGG+TGG - chr7_3:1149205-1149224 Msa1088130:CDS 55.0%
!! TCGACAATAGCGCTGATGGG+AGG + chr7_3:1149244-1149263 None:intergenic 55.0%
! GCACGTGCCTTGTTGGATTC+TGG - chr7_3:1149766-1149785 Msa1088130:CDS 55.0%
CACTGAGGAAACGCCACCAT+AGG + chr7_3:1150015-1150034 None:intergenic 55.0%
! CTATGGTGGCGTTTCCTCAG+TGG - chr7_3:1150013-1150032 Msa1088130:CDS 55.0%
CAGAGAAGGTGGCGATGGAG+AGG + chr7_3:1149031-1149050 None:intergenic 60.0%
GTCGTAGCCGTCAGAGAAGG+TGG + chr7_3:1149042-1149061 None:intergenic 60.0%
GTCGTCGTAGCCGTCAGAGA+AGG + chr7_3:1149045-1149064 None:intergenic 60.0%
GTAGGTGACCACATCGGCGT+CGG + chr7_3:1149084-1149103 None:intergenic 60.0%
! TGAGCTCAAGCGTCGCAGCT+CGG - chr7_3:1149109-1149128 Msa1088130:CDS 60.0%
GACGTTGTCCGTGTTGAGCC+AGG - chr7_3:1149640-1149659 Msa1088130:CDS 60.0%
GGGTTCAGGGGTTCCTATGG+TGG - chr7_3:1149999-1150018 Msa1088130:CDS 60.0%
CAGAGAAGGTGGCGATGGAG+AGG + chr7_3:1149031-1149050 None:intergenic 60.0%
GTCGTAGCCGTCAGAGAAGG+TGG + chr7_3:1149042-1149061 None:intergenic 60.0%
GTCGTCGTAGCCGTCAGAGA+AGG + chr7_3:1149045-1149064 None:intergenic 60.0%
GTAGGTGACCACATCGGCGT+CGG + chr7_3:1149084-1149103 None:intergenic 60.0%
! TGAGCTCAAGCGTCGCAGCT+CGG - chr7_3:1149109-1149128 Msa1088130:CDS 60.0%
GACGTTGTCCGTGTTGAGCC+AGG - chr7_3:1149640-1149659 Msa1088130:CDS 60.0%
GGGTTCAGGGGTTCCTATGG+TGG - chr7_3:1149999-1150018 Msa1088130:CDS 60.0%
AAGGTGGCGATGGAGAGGCC+GGG + chr7_3:1149026-1149045 None:intergenic 65.0%
GAAGGTGGCGATGGAGAGGC+CGG + chr7_3:1149027-1149046 None:intergenic 65.0%
GCCGTCAGAGAAGGTGGCGA+TGG + chr7_3:1149036-1149055 None:intergenic 65.0%
ATCCGACACCGACGCCGATG+TGG - chr7_3:1149073-1149092 Msa1088130:CDS 65.0%
!! GACCACATCGGCGTCGGTGT+CGG + chr7_3:1149078-1149097 None:intergenic 65.0%
CACGCCACCTTTGCGACCCA+GGG + chr7_3:1149212-1149231 None:intergenic 65.0%
ACACGCCACCTTTGCGACCC+AGG + chr7_3:1149213-1149232 None:intergenic 65.0%
AAGGTGGCGATGGAGAGGCC+GGG + chr7_3:1149026-1149045 None:intergenic 65.0%
GAAGGTGGCGATGGAGAGGC+CGG + chr7_3:1149027-1149046 None:intergenic 65.0%
GCCGTCAGAGAAGGTGGCGA+TGG + chr7_3:1149036-1149055 None:intergenic 65.0%
ATCCGACACCGACGCCGATG+TGG - chr7_3:1149073-1149092 Msa1088130:CDS 65.0%
!! GACCACATCGGCGTCGGTGT+CGG + chr7_3:1149078-1149097 None:intergenic 65.0%
CACGCCACCTTTGCGACCCA+GGG + chr7_3:1149212-1149231 None:intergenic 65.0%
ACACGCCACCTTTGCGACCC+AGG + chr7_3:1149213-1149232 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 1148864 1150287 1148864 ID=Msa1088130;Name=Msa1088130
chr7_3 mRNA 1148864 1150287 1148864 ID=Msa1088130-mRNA-1;Parent=Msa1088130;Name=Msa1088130-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|1|1|2|0|427
chr7_3 exon 1149598 1150287 1149598 ID=Msa1088130-mRNA-1:exon:465;Parent=Msa1088130-mRNA-1
chr7_3 exon 1148864 1149457 1148864 ID=Msa1088130-mRNA-1:exon:464;Parent=Msa1088130-mRNA-1
chr7_3 CDS 1149598 1150287 1149598 ID=Msa1088130-mRNA-1:cds;Parent=Msa1088130-mRNA-1
chr7_3 CDS 1148864 1149457 1148864 ID=Msa1088130-mRNA-1:cds;Parent=Msa1088130-mRNA-1
Gene Sequence

>Msa1088130

ATGGCGCAAAACCACCACTTCCTCATCATAACATACCCTATACAAGGTCACATAAACCCTGCTCTCCAATTCGTCAAGCGACTCGTTTCTTTGGGAGCACAAGTCACTTTTGCTACCACTGTTTACTTACACAACCGCCTTATCAACAAACCAAACATTCCCGGCCTCTCCATCGCCACCTTCTCTGACGGCTACGACGACGGTCACAAATCCGACACCGACGCCGATGTGGTCACCTACATGTCTGAGCTCAAGCGTCGCAGCTCGGAATTTCTCACAGATATCATACTCTCCGCCAAACGGGAAGATCGTCCATTCACTTGCTTGACCTATACTCTCATTATTCCCTGGGTCGCAAAGGTGGCGTGTGAGTTTCACCTCCCATCAGCGCTATTGTCGATTCAAGCAGCAACGGTTTTTGATATCTACTATTATTACTTTCATGAACACGGTGACTACATCACAAACAAATCAGAGGATGCAACGAGTTTGATAGAGCTGCATGGATTACCATTCTCACTCAAAAGTCGCGACCTTCCCTCATTTTTATTATCTTCAAATACATACACTTTCGGTATTCAATCTTTCAAAGAACAACTTCAAATTCTAGATGAAGAAACCAACCCTAGAGTACTTGTTAACACCGTTGAAGAGTTTGAATTAGAGGCACTAAGAGCGCCGTTGATGTTGGATGAATCGTCTGTGGTTTATGTTTCATTTGGTACTCTTGCTGTTTTGTCTAAGAGACAAATGGAGGAAATTGCACGTGCCTTGTTGGATTCTGGATTTTCTTTCTTGTGGGTTGTTAGAGACAAAAAAGTAATGCAACAAAAAGAAGATGAGGGTGGTAATGACGAGTTGAGTTGTAGAGAGGAACTTGAGAAGAATGTTAATGGGAAGATAGTTAAATGGTGTTGTCAGGTGGAAGTTTTGTCACATAGTTCTTTAGGTTGCTTTATGACACATTGTGGATGGAATTCAACAATGGAAAGTTTGGGTTCAGGGGTTCCTATGGTGGCGTTTCCTCAGTGGGCAGATCAAACTACTAATGCAAAGTTAGTTGAAGATTTGTGGAAGACTGGGGTGAGGATGAAACGTGATGATGAAGTGGGAATAGTGAAAGCTGAGGAAATTAGAAAGTGTTTGGAAGTGGTTATGAGGAAGAGAGAAAAAAGAGAGGAACTTAGGAGGAATGCTAAGAAATGGAAGAGTTTGGCTAGGGAAGCTATGAAGGAAGGAGGGTCTTCGAGTAAGAATCTGAACAACTTTCTAGATGATATTTGA
Protein sequence

>Msa1088130

MAQNHHFLIITYPIQGHINPALQFVKRLVSLGAQVTFATTVYLHNRLINKPNIPGLSIATFSDGYDDGHKSDTDADVVTYMSELKRRSSEFLTDIILSAKREDRPFTCLTYTLIIPWVAKVACEFHLPSALLSIQAATVFDIYYYYFHEHGDYITNKSEDATSLIELHGLPFSLKSRDLPSFLLSSNTYTFGIQSFKEQLQILDEETNPRVLVNTVEEFELEALRAPLMLDESSVVYVSFGTLAVLSKRQMEEIARALLDSGFSFLWVVRDKKVMQQKEDEGGNDELSCREELEKNVNGKIVKWCCQVEVLSHSSLGCFMTHCGWNSTMESLGSGVPMVAFPQWADQTTNAKLVEDLWKTGVRMKRDDEVGIVKAEEIRKCLEVVMRKREKREELRRNAKKWKSLAREAMKEGGSSSKNLNNFLDDI*