Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1032450 | XP_004493258.1 | 83.396 | 265 | 41 | 2 | 1 | 263 | 1 | 264 | 7.35e-156 | 452 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1032450 | sp|Q8W488|DTX21_ARATH | 63.600 | 250 | 91 | 0 | 14 | 263 | 22 | 271 | 6.16e-111 | 331 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1032450 | A0A1S2XT90 | 83.396 | 265 | 41 | 2 | 1 | 263 | 1 | 264 | 3.51e-156 | 452 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0005050 | Msa1032450 | 0.813571 | 2.392415e-51 | -8.615850e-47 |
Msa0008410 | Msa1032450 | 0.811313 | 7.450541e-51 | -8.615850e-47 |
Msa0012440 | Msa1032450 | 0.806815 | 6.849689e-50 | -8.615850e-47 |
Msa0019600 | Msa1032450 | 0.827128 | 1.856710e-54 | -8.615850e-47 |
Msa0035810 | Msa1032450 | 0.802257 | 6.113150e-49 | -8.615850e-47 |
Msa0036430 | Msa1032450 | 0.843247 | 1.575238e-58 | -8.615850e-47 |
Msa0043210 | Msa1032450 | 0.841014 | 6.141044e-58 | -8.615850e-47 |
Msa0044020 | Msa1032450 | 0.815387 | 9.488442e-52 | -8.615850e-47 |
Msa0050040 | Msa1032450 | 0.822940 | 1.810255e-53 | -8.615850e-47 |
Msa0053110 | Msa1032450 | 0.822514 | 2.274010e-53 | -8.615850e-47 |
Msa0057240 | Msa1032450 | 0.814061 | 1.866067e-51 | -8.615850e-47 |
Msa0069330 | Msa1032450 | 0.806645 | 7.438664e-50 | -8.615850e-47 |
Msa0073670 | Msa1032450 | 0.807817 | 4.199878e-50 | -8.615850e-47 |
Msa0083920 | Msa1032450 | 0.836085 | 1.150456e-56 | -8.615850e-47 |
Msa0084500 | Msa1032450 | 0.828359 | 9.393362e-55 | -8.615850e-47 |
Msa0090590 | Msa1032450 | 0.802274 | 6.062773e-49 | -8.615850e-47 |
Msa0098440 | Msa1032450 | 0.833180 | 6.182563e-56 | -8.615850e-47 |
Msa0102990 | Msa1032450 | 0.822949 | 1.801740e-53 | -8.615850e-47 |
Msa0109950 | Msa1032450 | 0.824284 | 8.773471e-54 | -8.615850e-47 |
Msa0111750 | Msa1032450 | 0.804371 | 2.231091e-49 | -8.615850e-47 |
Msa0114540 | Msa1032450 | -0.814007 | 1.918392e-51 | -8.615850e-47 |
Msa0618170 | Msa1032450 | 0.815236 | 1.025059e-51 | -8.615850e-47 |
Msa0620260 | Msa1032450 | 0.841001 | 6.192494e-58 | -8.615850e-47 |
Msa0625890 | Msa1032450 | 0.838471 | 2.819770e-57 | -8.615850e-47 |
Msa0641250 | Msa1032450 | 0.816562 | 5.188341e-52 | -8.615850e-47 |
Msa0663590 | Msa1032450 | 0.826989 | 2.004433e-54 | -8.615850e-47 |
Msa0663680 | Msa1032450 | 0.854074 | 1.567877e-61 | -8.615850e-47 |
Msa0669840 | Msa1032450 | 0.822600 | 2.171680e-53 | -8.615850e-47 |
Msa0678890 | Msa1032450 | 0.817441 | 3.293204e-52 | -8.615850e-47 |
Msa0680150 | Msa1032450 | 0.830578 | 2.714453e-55 | -8.615850e-47 |
Msa0688500 | Msa1032450 | 0.868409 | 6.670326e-66 | -8.615850e-47 |
Msa0707220 | Msa1032450 | 0.850942 | 1.224803e-60 | -8.615850e-47 |
Msa0716800 | Msa1032450 | 0.821753 | 3.414005e-53 | -8.615850e-47 |
Msa0734960 | Msa1032450 | 0.801659 | 8.111836e-49 | -8.615850e-47 |
Msa0741900 | Msa1032450 | 0.839944 | 1.170053e-57 | -8.615850e-47 |
Msa0747780 | Msa1032450 | 0.827049 | 1.938659e-54 | -8.615850e-47 |
Msa0752840 | Msa1032450 | 0.809078 | 2.260646e-50 | -8.615850e-47 |
Msa0757870 | Msa1032450 | 0.845266 | 4.520286e-59 | -8.615850e-47 |
Msa0761580 | Msa1032450 | 0.854961 | 8.684366e-62 | -8.615850e-47 |
Msa0764820 | Msa1032450 | 0.816617 | 5.042479e-52 | -8.615850e-47 |
Msa0807110 | Msa1032450 | 0.807543 | 4.802871e-50 | -8.615850e-47 |
Msa0810020 | Msa1032450 | 0.826573 | 2.518417e-54 | -8.615850e-47 |
Msa0816450 | Msa1032450 | 0.800035 | 1.740677e-48 | -8.615850e-47 |
Msa0822990 | Msa1032450 | 0.808441 | 3.091839e-50 | -8.615850e-47 |
Msa0833040 | Msa1032450 | 0.807484 | 4.941782e-50 | -8.615850e-47 |
Msa0840500 | Msa1032450 | 0.811352 | 7.307782e-51 | -8.615850e-47 |
Msa0841320 | Msa1032450 | 0.811961 | 5.386172e-51 | -8.615850e-47 |
Msa0130010 | Msa1032450 | 0.812408 | 4.303920e-51 | -8.615850e-47 |
Msa0130570 | Msa1032450 | 0.820549 | 6.469154e-53 | -8.615850e-47 |
Msa0134130 | Msa1032450 | 0.842365 | 2.703399e-58 | -8.615850e-47 |
Msa0137150 | Msa1032450 | 0.833672 | 4.662332e-56 | -8.615850e-47 |
Msa0145520 | Msa1032450 | 0.805280 | 1.440812e-49 | -8.615850e-47 |
Msa0149560 | Msa1032450 | 0.814600 | 1.418589e-51 | -8.615850e-47 |
Msa0150570 | Msa1032450 | 0.800793 | 1.219664e-48 | -8.615850e-47 |
Msa0153420 | Msa1032450 | 0.815734 | 7.944179e-52 | -8.615850e-47 |
Msa0197930 | Msa1032450 | 0.818908 | 1.533010e-52 | -8.615850e-47 |
Msa0203160 | Msa1032450 | 0.836153 | 1.105903e-56 | -8.615850e-47 |
Msa0219190 | Msa1032450 | 0.864663 | 1.033803e-64 | -8.615850e-47 |
Msa0220420 | Msa1032450 | 0.810717 | 1.003044e-50 | -8.615850e-47 |
Msa0235890 | Msa1032450 | 0.807762 | 4.313907e-50 | -8.615850e-47 |
Msa0370600 | Msa1032450 | 0.847228 | 1.320483e-59 | -8.615850e-47 |
Msa0380920 | Msa1032450 | 0.806686 | 7.291820e-50 | -8.615850e-47 |
Msa0392420 | Msa1032450 | 0.805135 | 1.544934e-49 | -8.615850e-47 |
Msa0392460 | Msa1032450 | 0.806884 | 6.623418e-50 | -8.615850e-47 |
Msa0392490 | Msa1032450 | 0.827978 | 1.160248e-54 | -8.615850e-47 |
Msa0408640 | Msa1032450 | 0.819722 | 1.000493e-52 | -8.615850e-47 |
Msa0413450 | Msa1032450 | 0.814268 | 1.679816e-51 | -8.615850e-47 |
Msa0413930 | Msa1032450 | 0.831525 | 1.588886e-55 | -8.615850e-47 |
Msa0418200 | Msa1032450 | 0.858223 | 9.545814e-63 | -8.615850e-47 |
Msa0426330 | Msa1032450 | 0.803013 | 4.268782e-49 | -8.615850e-47 |
Msa0426610 | Msa1032450 | 0.801535 | 8.599890e-49 | -8.615850e-47 |
Msa0430820 | Msa1032450 | 0.812635 | 3.840146e-51 | -8.615850e-47 |
Msa0436500 | Msa1032450 | 0.830478 | 2.871431e-55 | -8.615850e-47 |
Msa0439770 | Msa1032450 | 0.825722 | 4.015211e-54 | -8.615850e-47 |
Msa0444010 | Msa1032450 | 0.831670 | 1.463778e-55 | -8.615850e-47 |
Msa0451400 | Msa1032450 | 0.810879 | 9.252578e-51 | -8.615850e-47 |
Msa0453520 | Msa1032450 | 0.831827 | 1.338306e-55 | -8.615850e-47 |
Msa0458950 | Msa1032450 | 0.810313 | 1.226365e-50 | -8.615850e-47 |
Msa0464540 | Msa1032450 | 0.832716 | 8.066268e-56 | -8.615850e-47 |
Msa1007350 | Msa1032450 | 0.818623 | 1.780024e-52 | -8.615850e-47 |
Msa1013770 | Msa1032450 | 0.811173 | 7.991178e-51 | -8.615850e-47 |
Msa1014270 | Msa1032450 | 0.805188 | 1.506183e-49 | -8.615850e-47 |
Msa1032450 | Msa1033560 | 0.837048 | 6.538925e-57 | -8.615850e-47 |
Msa1032450 | Msa1037900 | 0.843599 | 1.268835e-58 | -8.615850e-47 |
Msa1032450 | Msa1037910 | 0.860996 | 1.398395e-63 | -8.615850e-47 |
Msa1032450 | Msa1037920 | 0.839017 | 2.037626e-57 | -8.615850e-47 |
Msa1032450 | Msa1041530 | 0.891521 | 3.681408e-74 | -8.615850e-47 |
Msa1032450 | Msa1042670 | 0.873124 | 1.874837e-67 | -8.615850e-47 |
Msa1032450 | Msa1045780 | 0.822640 | 2.126276e-53 | -8.615850e-47 |
Msa1032450 | Msa1061500 | 0.821354 | 4.220789e-53 | -8.615850e-47 |
Msa1032450 | Msa1073340 | 0.807327 | 5.335158e-50 | -8.615850e-47 |
Msa1032450 | Msa1073350 | 0.822224 | 2.656163e-53 | -8.615850e-47 |
Msa1032450 | Msa1081570 | 0.877162 | 7.839501e-69 | -8.615850e-47 |
Msa1032450 | Msa1088130 | 0.801439 | 8.997896e-49 | -8.615850e-47 |
Msa1032450 | Msa1097640 | 0.802629 | 5.123433e-49 | -8.615850e-47 |
Msa1032450 | Msa1100700 | 0.800299 | 1.538481e-48 | -8.615850e-47 |
Msa1032450 | Msa1113850 | 0.826292 | 2.939059e-54 | -8.615850e-47 |
Msa1032450 | Msa1116930 | 0.827564 | 1.459020e-54 | -8.615850e-47 |
Msa1032450 | Msa1123880 | 0.862130 | 6.301268e-64 | -8.615850e-47 |
Msa1032450 | Msa1127140 | 0.894201 | 3.080765e-75 | -8.615850e-47 |
Msa1032450 | Msa1129950 | 0.819575 | 1.081029e-52 | -8.615850e-47 |
Msa1032450 | Msa1129960 | 0.870472 | 1.422414e-66 | -8.615850e-47 |
Msa1032450 | Msa1129970 | 0.875158 | 3.841243e-68 | -8.615850e-47 |
Msa1032450 | Msa1129980 | 0.825543 | 4.426453e-54 | -8.615850e-47 |
Msa1032450 | Msa1130010 | 0.852117 | 5.696384e-61 | -8.615850e-47 |
Msa1032450 | Msa1130760 | 0.801130 | 1.041208e-48 | -8.615850e-47 |
Msa1032450 | Msa1134110 | 0.800403 | 1.464815e-48 | -8.615850e-47 |
Msa1032450 | Msa1136230 | 0.820697 | 5.982614e-53 | -8.615850e-47 |
Msa1032450 | Msa1139810 | 0.833128 | 6.369509e-56 | -8.615850e-47 |
Msa1032450 | Msa1145020 | 0.815080 | 1.110097e-51 | -8.615850e-47 |
Msa1032450 | Msa1160400 | 0.828775 | 7.454620e-55 | -8.615850e-47 |
Msa1032450 | Msa1166400 | 0.895214 | 1.184895e-75 | -8.615850e-47 |
Msa1032450 | Msa1169990 | 0.927725 | 7.866397e-92 | -8.615850e-47 |
Msa1032450 | Msa1201110 | 0.837968 | 3.800874e-57 | -8.615850e-47 |
Msa1032450 | Msa1201160 | 0.839422 | 1.599542e-57 | -8.615850e-47 |
Msa1032450 | Msa1224830 | 0.800470 | 1.419605e-48 | -8.615850e-47 |
Msa1032450 | Msa1227220 | 0.804127 | 2.508149e-49 | -8.615850e-47 |
Msa1032450 | Msa1228610 | 0.810387 | 1.182085e-50 | -8.615850e-47 |
Msa1032450 | Msa1233560 | 0.815284 | 1.000194e-51 | -8.615850e-47 |
Msa1032450 | Msa1294290 | 0.818948 | 1.501179e-52 | -8.615850e-47 |
Msa1032450 | Msa1299360 | 0.801357 | 9.353775e-49 | -8.615850e-47 |
Msa1032450 | Msa1305510 | 0.812887 | 3.381674e-51 | -8.615850e-47 |
Msa1032450 | Msa1313970 | 0.816606 | 5.071731e-52 | -8.615850e-47 |
Msa1032450 | Msa1355400 | 0.851742 | 7.281011e-61 | -8.615850e-47 |
Msa1032450 | Msa1365200 | 0.835510 | 1.609098e-56 | -8.615850e-47 |
Msa1032450 | Msa1390170 | 0.810516 | 1.108761e-50 | -8.615850e-47 |
Msa1032450 | Msa1398860 | 0.820195 | 7.796494e-53 | -8.615850e-47 |
Msa1032450 | Msa1408870 | 0.807765 | 4.308068e-50 | -8.615850e-47 |
Msa1032450 | Msa1414930 | 0.834540 | 2.824790e-56 | -8.615850e-47 |
Msa1032450 | Msa1420060 | 0.882668 | 8.586826e-71 | -8.615850e-47 |
Msa1032450 | Msa1421550 | 0.842975 | 1.862359e-58 | -8.615850e-47 |
Msa1032450 | Msa1429420 | 0.809158 | 2.172316e-50 | -8.615850e-47 |
Msa1032450 | Msa1445790 | 0.802850 | 4.612017e-49 | -8.615850e-47 |
Msa1032450 | Msa1461060 | 0.804025 | 2.632509e-49 | -8.615850e-47 |
Msa0246280 | Msa1032450 | 0.811788 | 5.877096e-51 | -8.615850e-47 |
Msa0298240 | Msa1032450 | 0.875235 | 3.615181e-68 | -8.615850e-47 |
Msa0317280 | Msa1032450 | 0.809594 | 1.751754e-50 | -8.615850e-47 |
Msa0323610 | Msa1032450 | 0.801623 | 8.250793e-49 | -8.615850e-47 |
Msa0334040 | Msa1032450 | 0.801619 | 8.267096e-49 | -8.615850e-47 |
Msa0336090 | Msa1032450 | 0.874726 | 5.391764e-68 | -8.615850e-47 |
Msa0337040 | Msa1032450 | 0.820059 | 8.377192e-53 | -8.615850e-47 |
Msa0337850 | Msa1032450 | 0.806967 | 6.360994e-50 | -8.615850e-47 |
Msa0344570 | Msa1032450 | 0.838174 | 3.362577e-57 | -8.615850e-47 |
Msa0351770 | Msa1032450 | 0.803286 | 3.747531e-49 | -8.615850e-47 |
Msa0359250 | Msa1032450 | 0.821702 | 3.507754e-53 | -8.615850e-47 |
Msa0361260 | Msa1032450 | 0.816010 | 6.893712e-52 | -8.615850e-47 |
Msa0487570 | Msa1032450 | 0.808845 | 2.534738e-50 | -8.615850e-47 |
Msa0487630 | Msa1032450 | 0.822581 | 2.193961e-53 | -8.615850e-47 |
Msa0497420 | Msa1032450 | 0.829424 | 5.188397e-55 | -8.615850e-47 |
Msa0517390 | Msa1032450 | 0.839012 | 2.043869e-57 | -8.615850e-47 |
Msa0527550 | Msa1032450 | 0.808987 | 2.364150e-50 | -8.615850e-47 |
Msa0534930 | Msa1032450 | 0.802102 | 6.578767e-49 | -8.615850e-47 |
Msa0535040 | Msa1032450 | 0.821787 | 3.352917e-53 | -8.615850e-47 |
Msa0537360 | Msa1032450 | 0.810335 | 1.213055e-50 | -8.615850e-47 |
Msa0537920 | Msa1032450 | 0.840962 | 6.340192e-58 | -8.615850e-47 |
Msa0538060 | Msa1032450 | 0.816576 | 5.150363e-52 | -8.615850e-47 |
Msa0538220 | Msa1032450 | 0.857759 | 1.311319e-62 | -8.615850e-47 |
Msa0568320 | Msa1032450 | 0.809622 | 1.727720e-50 | -8.615850e-47 |
Msa0571080 | Msa1032450 | 0.801588 | 8.387681e-49 | -8.615850e-47 |
Msa0575740 | Msa1032450 | 0.810623 | 1.051440e-50 | -8.615850e-47 |
Msa0585730 | Msa1032450 | 0.821761 | 3.400133e-53 | -8.615850e-47 |
Msa0591790 | Msa1032450 | 0.803841 | 2.876090e-49 | -8.615850e-47 |
Msa0850500 | Msa1032450 | 0.801267 | 9.758532e-49 | -8.615850e-47 |
Msa0862100 | Msa1032450 | 0.825426 | 4.718979e-54 | -8.615850e-47 |
Msa0867350 | Msa1032450 | 0.848448 | 6.089738e-60 | -8.615850e-47 |
Msa0872310 | Msa1032450 | 0.867195 | 1.636684e-65 | -8.615850e-47 |
Msa0873190 | Msa1032450 | 0.835513 | 1.606341e-56 | -8.615850e-47 |
Msa0880500 | Msa1032450 | 0.828762 | 7.506147e-55 | -8.615850e-47 |
Msa0885060 | Msa1032450 | 0.817299 | 3.543339e-52 | -8.615850e-47 |
Msa0896970 | Msa1032450 | 0.831625 | 1.501383e-55 | -8.615850e-47 |
Msa0898730 | Msa1032450 | 0.843108 | 1.715815e-58 | -8.615850e-47 |
Msa0905550 | Msa1032450 | 0.853525 | 2.256100e-61 | -8.615850e-47 |
Msa0929870 | Msa1032450 | 0.821302 | 4.340388e-53 | -8.615850e-47 |
Msa0930780 | Msa1032450 | 0.812836 | 3.469847e-51 | -8.615850e-47 |
Msa0936340 | Msa1032450 | 0.812257 | 4.643714e-51 | -8.615850e-47 |
Msa0937550 | Msa1032450 | 0.844411 | 7.685947e-59 | -8.615850e-47 |
Msa0938430 | Msa1032450 | 0.840508 | 8.337149e-58 | -8.615850e-47 |
Msa0961690 | Msa1032450 | 0.847412 | 1.175253e-59 | -8.615850e-47 |
Msa0974750 | Msa1032450 | 0.836376 | 9.703085e-57 | -8.615850e-47 |
Msa0975580 | Msa1032450 | 0.826920 | 2.081089e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1032450 | MtrunA17_Chr7g0254521 | 74.060 | 266 | 63 | 1 | 4 | 263 | 2 | 267 | 4.59e-139 | 400 |
Msa1032450 | MtrunA17_Chr7g0254511 | 69.057 | 265 | 77 | 2 | 3 | 263 | 2 | 265 | 7.24e-128 | 371 |
Msa1032450 | MtrunA17_Chr6g0460531 | 64.151 | 265 | 90 | 3 | 1 | 264 | 1 | 261 | 5.92e-117 | 335 |
Msa1032450 | MtrunA17_Chr7g0254531 | 96.629 | 178 | 6 | 0 | 86 | 263 | 1 | 178 | 8.23e-117 | 340 |
Msa1032450 | MtrunA17_Chr6g0460541 | 69.444 | 180 | 54 | 1 | 84 | 263 | 3 | 181 | 4.15e-81 | 249 |
Msa1032450 | MtrunA17_Chr5g0412541 | 47.951 | 244 | 127 | 0 | 20 | 263 | 29 | 272 | 3.68e-75 | 236 |
Msa1032450 | MtrunA17_Chr3g0132541 | 43.580 | 257 | 144 | 1 | 7 | 263 | 22 | 277 | 5.30e-73 | 229 |
Msa1032450 | MtrunA17_Chr3g0132531 | 44.322 | 273 | 141 | 1 | 2 | 263 | 10 | 282 | 4.78e-69 | 221 |
Msa1032450 | MtrunA17_Chr8g0368001 | 41.803 | 244 | 142 | 0 | 20 | 263 | 43 | 286 | 4.61e-65 | 211 |
Msa1032450 | MtrunA17_Chr1g0202761 | 44.492 | 236 | 130 | 1 | 28 | 263 | 44 | 278 | 1.28e-62 | 204 |
Msa1032450 | MtrunA17_Chr5g0412771 | 40.467 | 257 | 150 | 1 | 7 | 263 | 39 | 292 | 2.34e-57 | 191 |
Msa1032450 | MtrunA17_Chr2g0322671 | 39.773 | 264 | 157 | 2 | 2 | 263 | 26 | 289 | 9.29e-55 | 184 |
Msa1032450 | MtrunA17_Chr4g0024501 | 40.152 | 264 | 156 | 2 | 2 | 263 | 38 | 301 | 5.51e-54 | 182 |
Msa1032450 | MtrunA17_Chr7g0254491 | 71.304 | 115 | 29 | 1 | 3 | 113 | 2 | 116 | 1.23e-53 | 169 |
Msa1032450 | MtrunA17_Chr6g0468531 | 36.742 | 264 | 155 | 4 | 2 | 263 | 13 | 266 | 2.98e-49 | 169 |
Msa1032450 | MtrunA17_Chr7g0248051 | 41.525 | 236 | 137 | 1 | 28 | 263 | 71 | 305 | 3.67e-47 | 164 |
Msa1032450 | MtrunA17_Chr1g0154441 | 46.629 | 178 | 95 | 0 | 86 | 263 | 1 | 178 | 7.19e-47 | 160 |
Msa1032450 | MtrunA17_Chr5g0412571 | 47.895 | 190 | 93 | 3 | 79 | 263 | 29 | 217 | 2.61e-46 | 160 |
Msa1032450 | MtrunA17_Chr6g0468521 | 34.733 | 262 | 162 | 3 | 2 | 263 | 13 | 265 | 1.11e-43 | 154 |
Msa1032450 | MtrunA17_Chr6g0468511 | 33.588 | 262 | 165 | 3 | 2 | 263 | 13 | 265 | 1.42e-43 | 154 |
Msa1032450 | MtrunA17_Chr2g0288281 | 43.017 | 179 | 101 | 1 | 86 | 263 | 1 | 179 | 4.50e-41 | 145 |
Msa1032450 | MtrunA17_Chr1g0208791 | 36.975 | 238 | 149 | 1 | 27 | 263 | 43 | 280 | 6.56e-40 | 144 |
Msa1032450 | MtrunA17_Chr8g0364761 | 34.599 | 237 | 154 | 1 | 28 | 263 | 54 | 290 | 1.72e-38 | 137 |
Msa1032450 | MtrunA17_Chr7g0254501 | 72.043 | 93 | 25 | 1 | 171 | 263 | 2 | 93 | 5.86e-38 | 135 |
Msa1032450 | MtrunA17_Chr5g0442331 | 38.397 | 237 | 145 | 1 | 28 | 263 | 47 | 283 | 3.18e-36 | 134 |
Msa1032450 | MtrunA17_Chr6g0483381 | 34.221 | 263 | 162 | 6 | 6 | 263 | 10 | 266 | 3.92e-35 | 131 |
Msa1032450 | MtrunA17_Chr6g0477961 | 37.190 | 242 | 138 | 8 | 30 | 263 | 31 | 266 | 7.78e-34 | 127 |
Msa1032450 | MtrunA17_Chr6g0483361 | 34.496 | 258 | 154 | 7 | 13 | 263 | 15 | 264 | 2.52e-33 | 126 |
Msa1032450 | MtrunA17_Chr6g0483241 | 39.459 | 185 | 105 | 5 | 84 | 264 | 1 | 182 | 6.06e-31 | 113 |
Msa1032450 | MtrunA17_Chr2g0317171 | 33.835 | 266 | 163 | 4 | 6 | 263 | 14 | 274 | 1.10e-29 | 116 |
Msa1032450 | MtrunA17_Chr6g0483331 | 33.061 | 245 | 158 | 4 | 23 | 263 | 8 | 250 | 1.44e-29 | 115 |
Msa1032450 | MtrunA17_Chr6g0483161 | 39.344 | 183 | 106 | 3 | 84 | 263 | 1 | 181 | 3.43e-28 | 110 |
Msa1032450 | MtrunA17_Chr2g0317161 | 33.074 | 257 | 163 | 3 | 15 | 263 | 13 | 268 | 4.53e-28 | 112 |
Msa1032450 | MtrunA17_Chr2g0317131 | 30.712 | 267 | 171 | 4 | 5 | 263 | 20 | 280 | 5.84e-28 | 111 |
Msa1032450 | MtrunA17_Chr8g0392601 | 32.432 | 259 | 159 | 5 | 11 | 263 | 1 | 249 | 6.63e-28 | 111 |
Msa1032450 | MtrunA17_Chr1g0208821 | 30.943 | 265 | 172 | 5 | 6 | 263 | 18 | 278 | 1.21e-26 | 107 |
Msa1032450 | MtrunA17_Chr2g0317151 | 29.368 | 269 | 177 | 4 | 2 | 263 | 8 | 270 | 1.64e-26 | 107 |
Msa1032450 | MtrunA17_Chr3g0140931 | 30.172 | 232 | 149 | 5 | 4 | 230 | 27 | 250 | 5.19e-26 | 106 |
Msa1032450 | MtrunA17_Chr6g0483351 | 37.017 | 181 | 111 | 2 | 86 | 263 | 1 | 181 | 6.92e-26 | 105 |
Msa1032450 | MtrunA17_Chr6g0483341 | 30.038 | 263 | 172 | 7 | 7 | 263 | 23 | 279 | 7.49e-26 | 105 |
Msa1032450 | MtrunA17_Chr6g0460551 | 64.557 | 79 | 26 | 2 | 7 | 83 | 15 | 93 | 9.79e-26 | 97.8 |
Msa1032450 | MtrunA17_Chr6g0449061 | 29.528 | 254 | 169 | 4 | 13 | 262 | 20 | 267 | 1.13e-24 | 102 |
Msa1032450 | MtrunA17_Chr7g0251331 | 31.298 | 262 | 171 | 2 | 11 | 263 | 2 | 263 | 1.49e-24 | 102 |
Msa1032450 | MtrunA17_Chr5g0442311 | 35.714 | 182 | 112 | 3 | 86 | 264 | 1 | 180 | 4.85e-24 | 95.5 |
Msa1032450 | MtrunA17_Chr5g0440661 | 35.294 | 170 | 109 | 1 | 86 | 254 | 1 | 170 | 1.16e-23 | 97.4 |
Msa1032450 | MtrunA17_Chr1g0208891 | 32.870 | 216 | 142 | 1 | 8 | 220 | 2 | 217 | 6.92e-23 | 97.1 |
Msa1032450 | MtrunA17_Chr1g0208881 | 32.273 | 220 | 145 | 1 | 8 | 223 | 2 | 221 | 3.24e-21 | 92.4 |
Msa1032450 | MtrunA17_Chr6g0473701 | 30.165 | 242 | 154 | 5 | 26 | 259 | 127 | 361 | 5.30e-21 | 92.0 |
Msa1032450 | MtrunA17_Chr2g0317221 | 34.973 | 183 | 116 | 2 | 83 | 263 | 7 | 188 | 5.70e-21 | 91.3 |
Msa1032450 | MtrunA17_Chr5g0397991 | 30.769 | 208 | 132 | 4 | 7 | 209 | 47 | 247 | 3.54e-20 | 89.7 |
Msa1032450 | MtrunA17_Chr1g0203791 | 31.197 | 234 | 136 | 4 | 22 | 242 | 59 | 280 | 4.09e-20 | 89.4 |
Msa1032450 | MtrunA17_Chr5g0428251 | 28.085 | 235 | 151 | 6 | 6 | 230 | 28 | 254 | 6.39e-20 | 89.0 |
Msa1032450 | MtrunA17_Chr6g0467321 | 29.319 | 191 | 130 | 3 | 27 | 214 | 42 | 230 | 2.92e-17 | 80.9 |
Msa1032450 | MtrunA17_Chr7g0251321 | 32.584 | 178 | 119 | 1 | 86 | 262 | 1 | 178 | 6.87e-17 | 79.3 |
Msa1032450 | MtrunA17_Chr4g0013031 | 28.365 | 208 | 149 | 0 | 22 | 229 | 61 | 268 | 2.71e-16 | 78.2 |
Msa1032450 | MtrunA17_Chr5g0412561 | 44.000 | 75 | 41 | 1 | 9 | 83 | 19 | 92 | 8.94e-16 | 70.9 |
Msa1032450 | MtrunA17_Chr1g0154451 | 37.349 | 83 | 52 | 0 | 2 | 84 | 10 | 92 | 1.49e-12 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1032450 | AT1G33110.2 | 63.600 | 250 | 91 | 0 | 14 | 263 | 22 | 271 | 1.56e-113 | 332 |
Msa1032450 | AT1G33110.1 | 63.600 | 250 | 91 | 0 | 14 | 263 | 22 | 271 | 6.26e-112 | 331 |
Msa1032450 | AT1G33100.1 | 60.784 | 255 | 100 | 0 | 9 | 263 | 14 | 268 | 3.70e-110 | 327 |
Msa1032450 | AT1G33080.1 | 60.800 | 250 | 98 | 0 | 14 | 263 | 22 | 271 | 1.42e-108 | 323 |
Msa1032450 | AT1G33080.2 | 60.800 | 250 | 98 | 0 | 14 | 263 | 22 | 271 | 1.54e-108 | 322 |
Msa1032450 | AT1G33090.1 | 60.400 | 250 | 99 | 0 | 14 | 263 | 22 | 271 | 2.93e-107 | 319 |
Msa1032450 | AT5G65380.1 | 50.201 | 249 | 124 | 0 | 15 | 263 | 24 | 272 | 5.48e-74 | 234 |
Msa1032450 | AT5G44050.1 | 45.382 | 249 | 136 | 0 | 15 | 263 | 27 | 275 | 7.95e-72 | 228 |
Msa1032450 | AT5G17700.3 | 40.602 | 266 | 153 | 1 | 3 | 263 | 4 | 269 | 1.36e-69 | 220 |
Msa1032450 | AT5G17700.2 | 40.602 | 266 | 153 | 1 | 3 | 263 | 4 | 269 | 1.28e-68 | 220 |
Msa1032450 | AT5G17700.1 | 40.602 | 266 | 153 | 1 | 3 | 263 | 4 | 269 | 1.28e-68 | 220 |
Msa1032450 | AT5G10420.1 | 45.136 | 257 | 141 | 0 | 7 | 263 | 17 | 273 | 1.82e-67 | 217 |
Msa1032450 | AT1G47530.1 | 44.403 | 268 | 140 | 3 | 5 | 263 | 3 | 270 | 2.88e-67 | 216 |
Msa1032450 | AT4G00350.1 | 44.915 | 236 | 129 | 1 | 28 | 263 | 88 | 322 | 9.84e-65 | 211 |
Msa1032450 | AT3G26590.1 | 40.714 | 280 | 149 | 1 | 1 | 263 | 1 | 280 | 3.81e-64 | 209 |
Msa1032450 | AT4G25640.3 | 40.684 | 263 | 148 | 2 | 1 | 263 | 14 | 268 | 1.37e-63 | 206 |
Msa1032450 | AT4G25640.1 | 40.684 | 263 | 148 | 2 | 1 | 263 | 14 | 268 | 1.67e-63 | 206 |
Msa1032450 | AT4G25640.2 | 40.684 | 263 | 148 | 2 | 1 | 263 | 14 | 268 | 3.85e-63 | 206 |
Msa1032450 | AT3G03620.2 | 40.239 | 251 | 150 | 0 | 13 | 263 | 22 | 272 | 1.85e-62 | 204 |
Msa1032450 | AT3G03620.1 | 40.239 | 251 | 150 | 0 | 13 | 263 | 22 | 272 | 1.85e-62 | 204 |
Msa1032450 | AT5G38030.1 | 39.286 | 280 | 153 | 1 | 1 | 263 | 1 | 280 | 4.91e-61 | 200 |
Msa1032450 | AT1G12950.1 | 41.803 | 244 | 142 | 0 | 20 | 263 | 59 | 302 | 6.72e-60 | 198 |
Msa1032450 | AT1G23300.1 | 43.033 | 244 | 139 | 0 | 20 | 263 | 36 | 279 | 2.06e-57 | 191 |
Msa1032450 | AT1G61890.3 | 39.568 | 278 | 153 | 4 | 1 | 263 | 6 | 283 | 9.53e-56 | 186 |
Msa1032450 | AT1G61890.2 | 39.568 | 278 | 153 | 4 | 1 | 263 | 6 | 283 | 1.88e-55 | 186 |
Msa1032450 | AT1G61890.1 | 39.568 | 278 | 153 | 4 | 1 | 263 | 6 | 283 | 2.70e-55 | 185 |
Msa1032450 | AT3G21690.1 | 44.715 | 246 | 135 | 1 | 19 | 263 | 43 | 288 | 1.37e-54 | 184 |
Msa1032450 | AT1G11670.1 | 41.199 | 267 | 149 | 3 | 2 | 263 | 23 | 286 | 5.84e-53 | 179 |
Msa1032450 | AT1G47530.2 | 46.629 | 178 | 95 | 0 | 86 | 263 | 1 | 178 | 1.11e-47 | 163 |
Msa1032450 | AT3G26590.2 | 43.820 | 178 | 100 | 0 | 86 | 263 | 1 | 178 | 1.85e-44 | 154 |
Msa1032450 | AT4G21910.3 | 36.759 | 253 | 154 | 3 | 16 | 263 | 39 | 290 | 3.51e-42 | 150 |
Msa1032450 | AT4G21910.1 | 36.759 | 253 | 154 | 3 | 16 | 263 | 39 | 290 | 3.51e-42 | 150 |
Msa1032450 | AT2G34360.2 | 35.385 | 260 | 152 | 5 | 11 | 263 | 13 | 263 | 7.75e-42 | 149 |
Msa1032450 | AT4G21910.2 | 37.975 | 237 | 145 | 2 | 28 | 263 | 57 | 292 | 1.02e-41 | 149 |
Msa1032450 | AT4G21910.4 | 37.975 | 237 | 145 | 2 | 28 | 263 | 57 | 292 | 1.02e-41 | 149 |
Msa1032450 | AT5G52450.1 | 36.330 | 267 | 154 | 6 | 2 | 263 | 7 | 262 | 1.30e-41 | 149 |
Msa1032450 | AT2G34360.1 | 35.385 | 260 | 152 | 5 | 11 | 263 | 13 | 263 | 1.52e-41 | 149 |
Msa1032450 | AT3G59030.2 | 35.021 | 237 | 153 | 1 | 28 | 263 | 51 | 287 | 9.25e-41 | 145 |
Msa1032450 | AT3G59030.1 | 35.021 | 237 | 153 | 1 | 28 | 263 | 51 | 287 | 3.96e-40 | 145 |
Msa1032450 | AT1G73700.1 | 35.294 | 255 | 151 | 5 | 16 | 263 | 13 | 260 | 9.58e-39 | 141 |
Msa1032450 | AT4G21903.1 | 38.249 | 217 | 132 | 2 | 48 | 263 | 73 | 288 | 5.17e-37 | 137 |
Msa1032450 | AT4G21903.2 | 38.249 | 217 | 132 | 2 | 48 | 263 | 73 | 288 | 6.57e-37 | 137 |
Msa1032450 | AT4G21903.3 | 37.989 | 179 | 110 | 1 | 86 | 263 | 1 | 179 | 6.59e-30 | 116 |
Msa1032450 | AT1G71140.1 | 32.719 | 217 | 146 | 0 | 4 | 220 | 2 | 218 | 5.43e-29 | 114 |
Msa1032450 | AT1G66760.4 | 33.333 | 216 | 131 | 5 | 9 | 220 | 14 | 220 | 1.88e-26 | 106 |
Msa1032450 | AT1G66760.2 | 33.333 | 216 | 131 | 5 | 9 | 220 | 14 | 220 | 4.76e-26 | 106 |
Msa1032450 | AT1G66760.1 | 33.333 | 216 | 131 | 5 | 9 | 220 | 14 | 220 | 5.41e-26 | 106 |
Msa1032450 | AT3G23560.2 | 31.461 | 267 | 172 | 6 | 4 | 263 | 13 | 275 | 3.31e-24 | 100 |
Msa1032450 | AT3G23560.1 | 31.461 | 267 | 172 | 6 | 4 | 263 | 13 | 275 | 6.00e-24 | 100 |
Msa1032450 | AT1G15150.1 | 32.231 | 242 | 153 | 4 | 28 | 263 | 31 | 267 | 6.20e-24 | 100 |
Msa1032450 | AT2G04080.1 | 33.333 | 213 | 132 | 3 | 15 | 219 | 8 | 218 | 8.65e-24 | 100 |
Msa1032450 | AT2G04080.2 | 33.333 | 213 | 132 | 3 | 15 | 219 | 8 | 218 | 9.00e-24 | 100 |
Msa1032450 | AT1G15160.1 | 30.216 | 278 | 168 | 6 | 1 | 263 | 1 | 267 | 2.75e-23 | 99.0 |
Msa1032450 | AT1G64820.1 | 29.911 | 224 | 150 | 2 | 1 | 220 | 1 | 221 | 3.34e-22 | 95.9 |
Msa1032450 | AT3G23550.1 | 27.306 | 271 | 178 | 5 | 2 | 263 | 7 | 267 | 2.39e-21 | 93.2 |
Msa1032450 | AT2G04050.1 | 31.925 | 213 | 135 | 3 | 15 | 219 | 8 | 218 | 7.83e-21 | 91.7 |
Msa1032450 | AT1G15170.1 | 31.513 | 238 | 160 | 2 | 28 | 263 | 34 | 270 | 7.67e-20 | 89.0 |
Msa1032450 | AT2G04040.1 | 32.821 | 195 | 125 | 4 | 28 | 219 | 27 | 218 | 8.81e-20 | 88.6 |
Msa1032450 | AT1G66780.1 | 31.868 | 182 | 123 | 1 | 45 | 226 | 52 | 232 | 1.68e-19 | 87.8 |
Msa1032450 | AT1G58340.1 | 28.636 | 220 | 142 | 3 | 6 | 214 | 29 | 244 | 2.27e-19 | 87.8 |
Msa1032450 | AT2G04070.1 | 31.776 | 214 | 134 | 5 | 15 | 219 | 8 | 218 | 2.72e-19 | 87.4 |
Msa1032450 | AT1G15180.1 | 31.667 | 240 | 157 | 4 | 28 | 263 | 35 | 271 | 2.23e-18 | 84.7 |
Msa1032450 | AT2G38510.1 | 27.391 | 230 | 159 | 4 | 35 | 259 | 13 | 239 | 4.91e-18 | 83.6 |
Msa1032450 | AT2G04090.1 | 31.980 | 197 | 124 | 4 | 28 | 219 | 30 | 221 | 6.71e-18 | 83.2 |
Msa1032450 | AT2G04100.2 | 31.282 | 195 | 128 | 4 | 28 | 219 | 30 | 221 | 3.09e-16 | 78.2 |
Msa1032450 | AT2G04100.1 | 31.282 | 195 | 128 | 4 | 28 | 219 | 30 | 221 | 3.71e-16 | 78.2 |
Msa1032450 | AT1G71870.1 | 26.455 | 189 | 135 | 2 | 27 | 213 | 23 | 209 | 1.41e-13 | 70.5 |
Msa1032450 | AT5G19700.1 | 26.908 | 249 | 161 | 6 | 22 | 259 | 30 | 268 | 3.61e-13 | 69.3 |
Msa1032450 | AT4G29140.1 | 26.336 | 262 | 173 | 7 | 6 | 256 | 33 | 285 | 1.51e-12 | 67.4 |
Msa1032450 | AT5G49130.1 | 23.333 | 210 | 157 | 2 | 6 | 213 | 4 | 211 | 8.38e-12 | 65.1 |
Find 61 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAATGATTGAGTGATAATT+TGG | 0.160735 | 7_1:-67358962 | None:intergenic |
AATATAAGTTGACCAATATT+TGG | 0.173372 | 7_1:-67361158 | None:intergenic |
TTTCAATAAGTTTGGCCTTA+TGG | 0.194756 | 7_1:+67361132 | Msa1032450:CDS |
ACTAAGCATAAGAAAATTTA+TGG | 0.211737 | 7_1:-67358722 | None:intergenic |
TTTCTTCAGGTTTCATGTTA+TGG | 0.213532 | 7_1:+67361267 | Msa1032450:CDS |
TCATCTAGCAACTTCTTCTT+TGG | 0.229856 | 7_1:-67358834 | None:intergenic |
CAATCATTTGTTGGTCATAT+TGG | 0.249494 | 7_1:+67358975 | Msa1032450:CDS |
TGGCCTAGGATAATTAAAAT+TGG | 0.258540 | 7_1:-67360894 | None:intergenic |
TTAGAACTTCAAGTAGAAAA+TGG | 0.259366 | 7_1:-67358664 | None:intergenic |
GTCAAGCTTTCCCTTTCTTC+AGG | 0.265362 | 7_1:+67361254 | Msa1032450:CDS |
GCAATAAAAGCAAACAAAAT+TGG | 0.278019 | 7_1:-67360966 | None:intergenic |
TGCAATGATTTCAATAAGTT+TGG | 0.280321 | 7_1:+67361124 | Msa1032450:CDS |
CTGTTCATGTATTACTCTCT+TGG | 0.280963 | 7_1:+67361066 | Msa1032450:CDS |
GCCTTATGGATTCCAAATAT+TGG | 0.286497 | 7_1:+67361146 | Msa1032450:CDS |
AGATGAAAATCTTGTGAATA+TGG | 0.308578 | 7_1:-67358931 | None:intergenic |
TAGATTCGTCAATGGCATTC+TGG | 0.316111 | 7_1:+67359043 | Msa1032450:CDS |
TAGCAGGAACCATTGGTTAT+TGG | 0.337312 | 7_1:+67360937 | Msa1032450:CDS |
GCATACGGTGCAAAAGAATA+TGG | 0.338654 | 7_1:+67360786 | Msa1032450:CDS |
AAGCTAATGTGGGTGGTTGC+AGG | 0.359138 | 7_1:+67358903 | Msa1032450:CDS |
CTTGTGCTATGGTTTCATCT+TGG | 0.374871 | 7_1:-67360914 | None:intergenic |
TTTGTGACTGAAGGAATGTT+TGG | 0.384067 | 7_1:-67361001 | None:intergenic |
ACAAGAAGGAAAATTCAATA+TGG | 0.384877 | 7_1:+67358797 | Msa1032450:exon |
ATTATCACTCAATCATTTGT+TGG | 0.393308 | 7_1:+67358966 | Msa1032450:CDS |
TAACAATGAAAATCAAGCTT+GGG | 0.412212 | 7_1:+67361093 | Msa1032450:CDS |
CTATGGTTTCATCTTGGCCT+AGG | 0.413225 | 7_1:-67360908 | None:intergenic |
GAACATTATTATTGCATACT+TGG | 0.415000 | 7_1:+67361028 | Msa1032450:CDS |
ACCAATATTTGGAATCCATA+AGG | 0.415630 | 7_1:-67361147 | None:intergenic |
AAAATCAAGCTTGGGATTGT+TGG | 0.452702 | 7_1:+67361101 | Msa1032450:CDS |
TGCAAAAGAATATGGAATGA+TGG | 0.459585 | 7_1:+67360794 | Msa1032450:CDS |
GAAAATCTTGTGAATATGGC+TGG | 0.474697 | 7_1:-67358927 | None:intergenic |
GTTCTTGTTAGATTCGTCAA+TGG | 0.477427 | 7_1:+67359035 | Msa1032450:CDS |
GTGGTTGGTGTTCTGATACT+TGG | 0.477864 | 7_1:+67361189 | Msa1032450:CDS |
GGTTCCTGCTACTTGTGCTA+TGG | 0.479039 | 7_1:-67360925 | None:intergenic |
AGAAGAAGAAGAATTGTCAT+TGG | 0.479669 | 7_1:+67358857 | Msa1032450:CDS |
TTAACAATGAAAATCAAGCT+TGG | 0.486475 | 7_1:+67361092 | Msa1032450:CDS |
TAACATGAAACCTGAAGAAA+GGG | 0.491734 | 7_1:-67361264 | None:intergenic |
GAAAGGGAAAGCTTGACAAC+AGG | 0.493053 | 7_1:-67361248 | None:intergenic |
GAGTATATCTTCAAAGATCA+TGG | 0.493939 | 7_1:+67360817 | Msa1032450:CDS |
ATAACATGAAACCTGAAGAA+AGG | 0.497739 | 7_1:-67361265 | None:intergenic |
TTGTGACTGAAGGAATGTTT+GGG | 0.500082 | 7_1:-67361000 | None:intergenic |
ATATAATTTGTAGTTAGGAA+TGG | 0.513509 | 7_1:+67360734 | Msa1032450:intron |
GCACAAGTAGCAGGAACCAT+TGG | 0.529388 | 7_1:+67360930 | Msa1032450:CDS |
GAATGTTTGGGTAGTGAATG+AGG | 0.529494 | 7_1:-67360988 | None:intergenic |
GTTAGGAATGGCTAGTGCAT+TGG | 0.537339 | 7_1:+67360746 | Msa1032450:intron |
TTATATTTATTACATGTGGT+TGG | 0.539646 | 7_1:+67361174 | Msa1032450:CDS |
GCAAAAGAATATGGAATGAT+GGG | 0.553514 | 7_1:+67360795 | Msa1032450:CDS |
CAACTTATATTTATTACATG+TGG | 0.553817 | 7_1:+67361170 | Msa1032450:CDS |
AGAAGGAAAATTCAATATGG+AGG | 0.560341 | 7_1:+67358800 | Msa1032450:exon |
TGTTCCTGCTTTGTGACTGA+AGG | 0.561666 | 7_1:-67361010 | None:intergenic |
GAAGGAAAATTCAATATGGA+GGG | 0.561732 | 7_1:+67358801 | Msa1032450:exon |
GAAACCATAGCACAAGTAGC+AGG | 0.568631 | 7_1:+67360921 | Msa1032450:CDS |
TGGTGTTCTGATACTTGGAA+AGG | 0.574232 | 7_1:+67361194 | Msa1032450:CDS |
TGTCATTGGTGAAGAAGATG+TGG | 0.581561 | 7_1:+67358871 | Msa1032450:CDS |
GGAGTTGTGAAGATGAATAG+TGG | 0.583244 | 7_1:-67360873 | None:intergenic |
CATTCCTTCAGTCACAAAGC+AGG | 0.586851 | 7_1:+67361006 | Msa1032450:CDS |
TGGAATTGACCAATAACCAA+TGG | 0.593039 | 7_1:-67360946 | None:intergenic |
AGTGCATTGGCAACACTATG+TGG | 0.597511 | 7_1:+67360759 | Msa1032450:CDS |
ACACTATGTGGACAAGCATA+CGG | 0.598328 | 7_1:+67360771 | Msa1032450:CDS |
GGAAAGAGAGCAAGCTAATG+TGG | 0.601094 | 7_1:+67358892 | Msa1032450:CDS |
AGAGAGCAAGCTAATGTGGG+TGG | 0.672151 | 7_1:+67358896 | Msa1032450:CDS |
GAAAGAGAGCAAGCTAATGT+GGG | 0.682728 | 7_1:+67358893 | Msa1032450:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCTTAATTCTTTTTTTTTTT+TGG | + | chr7_1:67359250-67359269 | Msa1032450:intron | 10.0% |
!!! | CTTAATTCTTTTTTTTTTTT+GGG | + | chr7_1:67359251-67359270 | Msa1032450:intron | 10.0% |
!! | TATCATCAATATAAATATTT+GGG | - | chr7_1:67359627-67359646 | None:intergenic | 10.0% |
!! | TTATCATCAATATAAATATT+TGG | - | chr7_1:67359628-67359647 | None:intergenic | 10.0% |
!! | AGATAGAAAAATATATAAAT+AGG | + | chr7_1:67359867-67359886 | Msa1032450:intron | 10.0% |
!!! | TTTAATTAACAAATGTTTTT+TGG | - | chr7_1:67359909-67359928 | None:intergenic | 10.0% |
!! | TTATGATAAATTACTTTAAA+TGG | - | chr7_1:67360146-67360165 | None:intergenic | 10.0% |
!! | TATTGAAAAATAAAACAAGA+AGG | + | chr7_1:67358783-67358802 | Msa1032450:five_prime_UTR | 15.0% |
!! | AAGTTTCAAAAATAATCATA+TGG | + | chr7_1:67359577-67359596 | Msa1032450:intron | 15.0% |
!! | AGTTTCAAAAATAATCATAT+GGG | + | chr7_1:67359578-67359597 | Msa1032450:intron | 15.0% |
!!! | GTTTTAGACAATAAATAAAT+AGG | + | chr7_1:67359676-67359695 | Msa1032450:intron | 15.0% |
!!! | AATTTTAACACTAATATTCA+TGG | - | chr7_1:67359947-67359966 | None:intergenic | 15.0% |
!! | ATGAATATTAGTGTTAAAAT+TGG | + | chr7_1:67359946-67359965 | Msa1032450:intron | 15.0% |
!!! | ATTCTCTTATTTTATGTTTT+CGG | - | chr7_1:67360279-67360298 | None:intergenic | 15.0% |
!!! | AATTGATATAATTTGTAGTT+AGG | + | chr7_1:67360729-67360748 | Msa1032450:intron | 15.0% |
!! | ACTAAGCATAAGAAAATTTA+TGG | - | chr7_1:67358725-67358744 | None:intergenic | 20.0% |
!!! | AAAAAACATGTTTCTTTTTG+AGG | + | chr7_1:67359186-67359205 | Msa1032450:intron | 20.0% |
!!! | AAAAACATGTTTCTTTTTGA+GGG | + | chr7_1:67359187-67359206 | Msa1032450:intron | 20.0% |
!! | TGTGAAATGAATAAGAAAAT+TGG | + | chr7_1:67359551-67359570 | Msa1032450:intron | 20.0% |
!! | GTGAAATGAATAAGAAAATT+GGG | + | chr7_1:67359552-67359571 | Msa1032450:intron | 20.0% |
!!! | ATAAACTTATGTCACATTTT+TGG | - | chr7_1:67359756-67359775 | None:intergenic | 20.0% |
!!! | CATAAGTTTATTTCTTTTGA+AGG | + | chr7_1:67359765-67359784 | Msa1032450:intron | 20.0% |
!! | TCAAAAAAAAAATTAGTGTG+TGG | + | chr7_1:67360209-67360228 | Msa1032450:intron | 20.0% |
!!! | ATAAAACTCAGTTAATTTGT+TGG | - | chr7_1:67360501-67360520 | None:intergenic | 20.0% |
!! | TGAGTTAAAGTAGATTTAAA+AGG | + | chr7_1:67360616-67360635 | Msa1032450:intron | 20.0% |
!! | AAGTAGATTTAAAAGGTAAA+AGG | + | chr7_1:67360623-67360642 | Msa1032450:intron | 20.0% |
!!! | CATGTATTTTTTGAATATTG+TGG | - | chr7_1:67360666-67360685 | None:intergenic | 20.0% |
!! | TTTATAAAAGCCATTAGTAT+TGG | - | chr7_1:67360711-67360730 | None:intergenic | 20.0% |
!!! | ATATAATTTGTAGTTAGGAA+TGG | + | chr7_1:67360734-67360753 | Msa1032450:intron | 20.0% |
!!! | AATATAAGTTGACCAATATT+TGG | - | chr7_1:67361161-67361180 | None:intergenic | 20.0% |
!! | CAACTTATATTTATTACATG+TGG | + | chr7_1:67361170-67361189 | Msa1032450:CDS | 20.0% |
!! | TTATATTTATTACATGTGGT+TGG | + | chr7_1:67361174-67361193 | Msa1032450:CDS | 20.0% |
!!! | TTCTCTAAGATATTTCTTTT+TGG | + | chr7_1:67361300-67361319 | Msa1032450:three_prime_UTR | 20.0% |
! | TTAGAACTTCAAGTAGAAAA+TGG | - | chr7_1:67358667-67358686 | None:intergenic | 25.0% |
! | ACAAGAAGGAAAATTCAATA+TGG | + | chr7_1:67358797-67358816 | Msa1032450:exon | 25.0% |
! | AGATGAAAATCTTGTGAATA+TGG | - | chr7_1:67358934-67358953 | None:intergenic | 25.0% |
!! | TTCACAAGATTTTCATCTTT+TGG | + | chr7_1:67358936-67358955 | Msa1032450:CDS | 25.0% |
! | CAAATGATTGAGTGATAATT+TGG | - | chr7_1:67358965-67358984 | None:intergenic | 25.0% |
! | ATTATCACTCAATCATTTGT+TGG | + | chr7_1:67358966-67358985 | Msa1032450:CDS | 25.0% |
!!! | TATTTTTGTGATGATTCTAG+TGG | + | chr7_1:67359140-67359159 | Msa1032450:intron | 25.0% |
!! | TCTAGTGGATCTAAAATAAA+AGG | + | chr7_1:67359155-67359174 | Msa1032450:intron | 25.0% |
!! | CTAGTGGATCTAAAATAAAA+GGG | + | chr7_1:67359156-67359175 | Msa1032450:intron | 25.0% |
!! | TAGTGGATCTAAAATAAAAG+GGG | + | chr7_1:67359157-67359176 | Msa1032450:intron | 25.0% |
! | TTGGAAAAAAGTTGAAGATT+TGG | + | chr7_1:67359218-67359237 | Msa1032450:intron | 25.0% |
!!! | TTTTTTGGGTCAGTTTTTTT+TGG | + | chr7_1:67359265-67359284 | Msa1032450:intron | 25.0% |
!!! | TTTTTGGGTCAGTTTTTTTT+GGG | + | chr7_1:67359266-67359285 | Msa1032450:intron | 25.0% |
! | ACAATGCATTATTATATGCA+GGG | - | chr7_1:67359370-67359389 | None:intergenic | 25.0% |
! | AAATATTTGGGAAGATAGAA+AGG | - | chr7_1:67359615-67359634 | None:intergenic | 25.0% |
!! | AGAAGAATACAAAAAAGCAT+AGG | + | chr7_1:67359821-67359840 | Msa1032450:intron | 25.0% |
!! | GAAGAATACAAAAAAGCATA+GGG | + | chr7_1:67359822-67359841 | Msa1032450:intron | 25.0% |
!!! | AAATTCACACATTTTAAGTG+TGG | + | chr7_1:67360032-67360051 | Msa1032450:intron | 25.0% |
! | TGTGGAAAAATAGAGAATTT+GGG | + | chr7_1:67360050-67360069 | Msa1032450:intron | 25.0% |
!! | TATTGACTATACTCGAAATA+TGG | + | chr7_1:67360518-67360537 | Msa1032450:intron | 25.0% |
! | TTTGAATATTGTGGTAGTAT+AGG | - | chr7_1:67360657-67360676 | None:intergenic | 25.0% |
!!! | ACTCCAATTTTAATTATCCT+AGG | + | chr7_1:67360891-67360910 | Msa1032450:CDS | 25.0% |
! | GCAATAAAAGCAAACAAAAT+TGG | - | chr7_1:67360969-67360988 | None:intergenic | 25.0% |
! | GAACATTATTATTGCATACT+TGG | + | chr7_1:67361028-67361047 | Msa1032450:CDS | 25.0% |
! | TTAACAATGAAAATCAAGCT+TGG | + | chr7_1:67361092-67361111 | Msa1032450:CDS | 25.0% |
! | TAACAATGAAAATCAAGCTT+GGG | + | chr7_1:67361093-67361112 | Msa1032450:CDS | 25.0% |
! | TGCAATGATTTCAATAAGTT+TGG | + | chr7_1:67361124-67361143 | Msa1032450:CDS | 25.0% |
!!! | TTTTAGCTTTACAAGATCTT+TGG | + | chr7_1:67361225-67361244 | Msa1032450:CDS | 25.0% |
AGAAGGAAAATTCAATATGG+AGG | + | chr7_1:67358800-67358819 | Msa1032450:exon | 30.0% | |
GAAGGAAAATTCAATATGGA+GGG | + | chr7_1:67358801-67358820 | Msa1032450:exon | 30.0% | |
AGAAGAAGAAGAATTGTCAT+TGG | + | chr7_1:67358857-67358876 | Msa1032450:CDS | 30.0% | |
! | CAATCATTTGTTGGTCATAT+TGG | + | chr7_1:67358975-67358994 | Msa1032450:CDS | 30.0% |
TCTCTTTCACATTATTCTAG+TGG | + | chr7_1:67359095-67359114 | Msa1032450:intron | 30.0% | |
!! | CTTTTTGAGGGAATTGTTTT+TGG | + | chr7_1:67359199-67359218 | Msa1032450:intron | 30.0% |
CAATGCATTATTATATGCAG+GGG | - | chr7_1:67359369-67359388 | None:intergenic | 30.0% | |
GACAATGCATTATTATATGC+AGG | - | chr7_1:67359371-67359390 | None:intergenic | 30.0% | |
! | TAGCAGTTAGCATATAGTTT+TGG | + | chr7_1:67359492-67359511 | Msa1032450:intron | 30.0% |
! | TTTGAAGTACCAACATAGTT+TGG | - | chr7_1:67359728-67359747 | None:intergenic | 30.0% |
!! | TCTATCTCTGCTTTTGAATT+TGG | - | chr7_1:67359854-67359873 | None:intergenic | 30.0% |
GTGTGGAAAAATAGAGAATT+TGG | + | chr7_1:67360049-67360068 | Msa1032450:intron | 30.0% | |
GTGGAAAAATAGAGAATTTG+GGG | + | chr7_1:67360051-67360070 | Msa1032450:intron | 30.0% | |
TTGTCTTCTTAGTTTCTTTG+AGG | - | chr7_1:67360372-67360391 | None:intergenic | 30.0% | |
AACTCTAGTGATTAACTAAG+AGG | + | chr7_1:67360407-67360426 | Msa1032450:intron | 30.0% | |
AAACAATAGAGTTTGTCGAA+AGG | - | chr7_1:67360476-67360495 | None:intergenic | 30.0% | |
! | CATTAGTATTGGACTTAGTT+TGG | - | chr7_1:67360700-67360719 | None:intergenic | 30.0% |
CAAACTAAGTCCAATACTAA+TGG | + | chr7_1:67360698-67360717 | Msa1032450:intron | 30.0% | |
TGCAAAAGAATATGGAATGA+TGG | + | chr7_1:67360794-67360813 | Msa1032450:CDS | 30.0% | |
GCAAAAGAATATGGAATGAT+GGG | + | chr7_1:67360795-67360814 | Msa1032450:CDS | 30.0% | |
GAGTATATCTTCAAAGATCA+TGG | + | chr7_1:67360817-67360836 | Msa1032450:CDS | 30.0% | |
TGGCCTAGGATAATTAAAAT+TGG | - | chr7_1:67360897-67360916 | None:intergenic | 30.0% | |
!! | TTTCAATAAGTTTGGCCTTA+TGG | + | chr7_1:67361132-67361151 | Msa1032450:CDS | 30.0% |
! | ACCAATATTTGGAATCCATA+AGG | - | chr7_1:67361150-67361169 | None:intergenic | 30.0% |
TAACATGAAACCTGAAGAAA+GGG | - | chr7_1:67361267-67361286 | None:intergenic | 30.0% | |
ATAACATGAAACCTGAAGAA+AGG | - | chr7_1:67361268-67361287 | None:intergenic | 30.0% | |
! | TTTCTTCAGGTTTCATGTTA+TGG | + | chr7_1:67361267-67361286 | Msa1032450:CDS | 30.0% |
TCATCTAGCAACTTCTTCTT+TGG | - | chr7_1:67358837-67358856 | None:intergenic | 35.0% | |
GAAAATCTTGTGAATATGGC+TGG | - | chr7_1:67358930-67358949 | None:intergenic | 35.0% | |
GTTCTTGTTAGATTCGTCAA+TGG | + | chr7_1:67359035-67359054 | Msa1032450:CDS | 35.0% | |
ACCTCATAAGGTGAATAAGT+GGG | + | chr7_1:67359321-67359340 | Msa1032450:intron | 35.0% | |
ATAGTTTGGATGTTATGCAG+TGG | - | chr7_1:67359714-67359733 | None:intergenic | 35.0% | |
GCATAACATCCAAACTATGT+TGG | + | chr7_1:67359716-67359735 | Msa1032450:intron | 35.0% | |
! | ATACAAAAAAGCATAGGGCA+TGG | + | chr7_1:67359827-67359846 | Msa1032450:intron | 35.0% |
! | AGACTTGTTCTCACTAAACA+GGG | - | chr7_1:67360005-67360024 | None:intergenic | 35.0% |
! | TAGACTTGTTCTCACTAAAC+AGG | - | chr7_1:67360006-67360025 | None:intergenic | 35.0% |
TGCAAGGAAGATTATATGCA+GGG | - | chr7_1:67360096-67360115 | None:intergenic | 35.0% | |
TTGCAAGGAAGATTATATGC+AGG | - | chr7_1:67360097-67360116 | None:intergenic | 35.0% | |
CAACTCAATTGTTAGTTGCA+AGG | - | chr7_1:67360112-67360131 | None:intergenic | 35.0% | |
ATCACTAGAGTTCAATGACT+TGG | - | chr7_1:67360399-67360418 | None:intergenic | 35.0% | |
TGGAATTGACCAATAACCAA+TGG | - | chr7_1:67360949-67360968 | None:intergenic | 35.0% | |
TTGTGACTGAAGGAATGTTT+GGG | - | chr7_1:67361003-67361022 | None:intergenic | 35.0% | |
TTTGTGACTGAAGGAATGTT+TGG | - | chr7_1:67361004-67361023 | None:intergenic | 35.0% | |
CTGTTCATGTATTACTCTCT+TGG | + | chr7_1:67361066-67361085 | Msa1032450:CDS | 35.0% | |
AAAATCAAGCTTGGGATTGT+TGG | + | chr7_1:67361101-67361120 | Msa1032450:CDS | 35.0% | |
GCCTTATGGATTCCAAATAT+TGG | + | chr7_1:67361146-67361165 | Msa1032450:CDS | 35.0% | |
TGTCATTGGTGAAGAAGATG+TGG | + | chr7_1:67358871-67358890 | Msa1032450:CDS | 40.0% | |
GAAAGAGAGCAAGCTAATGT+GGG | + | chr7_1:67358893-67358912 | Msa1032450:CDS | 40.0% | |
TAGATTCGTCAATGGCATTC+TGG | + | chr7_1:67359043-67359062 | Msa1032450:CDS | 40.0% | |
!!! | TTTTTTTTGGGTCAGGTAGC+AGG | + | chr7_1:67359278-67359297 | Msa1032450:intron | 40.0% |
TGGCTAGAATTCACCTCATA+AGG | + | chr7_1:67359309-67359328 | Msa1032450:intron | 40.0% | |
CACCTCATAAGGTGAATAAG+TGG | + | chr7_1:67359320-67359339 | Msa1032450:intron | 40.0% | |
CCTCATAAGGTGAATAAGTG+GGG | + | chr7_1:67359322-67359341 | Msa1032450:intron | 40.0% | |
TATCAACTGAGCTATGCTCA+CGG | + | chr7_1:67359392-67359411 | Msa1032450:intron | 40.0% | |
!! | CTAGAGTTCAATGACTTGGT+TGG | - | chr7_1:67360395-67360414 | None:intergenic | 40.0% |
TCGACAGAATCTGGATTCTT+CGG | + | chr7_1:67360436-67360455 | Msa1032450:intron | 40.0% | |
ACACTATGTGGACAAGCATA+CGG | + | chr7_1:67360771-67360790 | Msa1032450:CDS | 40.0% | |
GCATACGGTGCAAAAGAATA+TGG | + | chr7_1:67360786-67360805 | Msa1032450:CDS | 40.0% | |
GGAGTTGTGAAGATGAATAG+TGG | - | chr7_1:67360876-67360895 | None:intergenic | 40.0% | |
CTTGTGCTATGGTTTCATCT+TGG | - | chr7_1:67360917-67360936 | None:intergenic | 40.0% | |
! | TAGCAGGAACCATTGGTTAT+TGG | + | chr7_1:67360937-67360956 | Msa1032450:CDS | 40.0% |
GAATGTTTGGGTAGTGAATG+AGG | - | chr7_1:67360991-67361010 | None:intergenic | 40.0% | |
TGGTGTTCTGATACTTGGAA+AGG | + | chr7_1:67361194-67361213 | Msa1032450:CDS | 40.0% | |
GGAAAGAGAGCAAGCTAATG+TGG | + | chr7_1:67358892-67358911 | Msa1032450:CDS | 45.0% | |
!!! | GGGTCAGTTTTTTTTGGGTC+AGG | + | chr7_1:67359271-67359290 | Msa1032450:intron | 45.0% |
TGAGGTGAATTCTAGCCACT+AGG | - | chr7_1:67359307-67359326 | None:intergenic | 45.0% | |
CCCCACTTATTCACCTTATG+AGG | - | chr7_1:67359325-67359344 | None:intergenic | 45.0% | |
ATTATTATATGCAGGGGCCG+GGG | - | chr7_1:67359363-67359382 | None:intergenic | 45.0% | |
CATTATTATATGCAGGGGCC+GGG | - | chr7_1:67359364-67359383 | None:intergenic | 45.0% | |
GCATTATTATATGCAGGGGC+CGG | - | chr7_1:67359365-67359384 | None:intergenic | 45.0% | |
GTGAGCATAGCTCAGTTGAT+AGG | - | chr7_1:67359393-67359412 | None:intergenic | 45.0% | |
ATCAACTGAGCTATGCTCAC+GGG | + | chr7_1:67359393-67359412 | Msa1032450:intron | 45.0% | |
! | AGAATTTGGGGTTCAAGCTC+AGG | + | chr7_1:67360063-67360082 | Msa1032450:intron | 45.0% |
AGGAATCGTTCGACAGAATC+TGG | + | chr7_1:67360427-67360446 | Msa1032450:intron | 45.0% | |
GTTAGGAATGGCTAGTGCAT+TGG | + | chr7_1:67360746-67360765 | Msa1032450:intron | 45.0% | |
! | AGTGCATTGGCAACACTATG+TGG | + | chr7_1:67360759-67360778 | Msa1032450:CDS | 45.0% |
CTATGGTTTCATCTTGGCCT+AGG | - | chr7_1:67360911-67360930 | None:intergenic | 45.0% | |
GAAACCATAGCACAAGTAGC+AGG | + | chr7_1:67360921-67360940 | Msa1032450:CDS | 45.0% | |
CATTCCTTCAGTCACAAAGC+AGG | + | chr7_1:67361006-67361025 | Msa1032450:CDS | 45.0% | |
TGTTCCTGCTTTGTGACTGA+AGG | - | chr7_1:67361013-67361032 | None:intergenic | 45.0% | |
! | GTGGTTGGTGTTCTGATACT+TGG | + | chr7_1:67361189-67361208 | Msa1032450:CDS | 45.0% |
GAAAGGGAAAGCTTGACAAC+AGG | - | chr7_1:67361251-67361270 | None:intergenic | 45.0% | |
GTCAAGCTTTCCCTTTCTTC+AGG | + | chr7_1:67361254-67361273 | Msa1032450:CDS | 45.0% | |
!!! | CTATTTTTTTTTATTATTAT+TGG | - | chr7_1:67359455-67359474 | None:intergenic | 5.0% |
!! | AATTTAAATTATTTCAAATT+AGG | + | chr7_1:67360335-67360354 | Msa1032450:intron | 5.0% |
AGAGAGCAAGCTAATGTGGG+TGG | + | chr7_1:67358896-67358915 | Msa1032450:CDS | 50.0% | |
AAGCTAATGTGGGTGGTTGC+AGG | + | chr7_1:67358903-67358922 | Msa1032450:CDS | 50.0% | |
! | AGGTGAATAAGTGGGGTGTC+CGG | + | chr7_1:67359329-67359348 | Msa1032450:intron | 50.0% |
! | GGTTCCTGCTACTTGTGCTA+TGG | - | chr7_1:67360928-67360947 | None:intergenic | 50.0% |
GCACAAGTAGCAGGAACCAT+TGG | + | chr7_1:67360930-67360949 | Msa1032450:CDS | 50.0% | |
TCAGGTAGCAGGTAGCCTAG+TGG | + | chr7_1:67359289-67359308 | Msa1032450:intron | 55.0% | |
! | GGTGAATAAGTGGGGTGTCC+GGG | + | chr7_1:67359330-67359349 | Msa1032450:intron | 55.0% |
! | GTGAATAAGTGGGGTGTCCG+GGG | + | chr7_1:67359331-67359350 | Msa1032450:intron | 55.0% |
GGTGTCCGGGGTTCGAACCC+CGG | + | chr7_1:67359343-67359362 | Msa1032450:intron | 70.0% | |
AGGGGCCGGGGTTCGAACCC+CGG | - | chr7_1:67359351-67359370 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_1 | gene | 67358661 | 67361325 | 67358661 | ID=Msa1032450;Name=Msa1032450 |
chr7_1 | mRNA | 67358661 | 67361325 | 67358661 | ID=Msa1032450-mRNA-1;Parent=Msa1032450;Name=Msa1032450-mRNA-1;_AED=0.06;_eAED=0.06;_QI=155|1|1|1|1|1|2|33|264 |
chr7_1 | exon | 67358661 | 67359064 | 67358661 | ID=Msa1032450-mRNA-1:exon:15427;Parent=Msa1032450-mRNA-1 |
chr7_1 | exon | 67360747 | 67361325 | 67360747 | ID=Msa1032450-mRNA-1:exon:15428;Parent=Msa1032450-mRNA-1 |
chr7_1 | five_prime_UTR | 67358661 | 67358815 | 67358661 | ID=Msa1032450-mRNA-1:five_prime_utr;Parent=Msa1032450-mRNA-1 |
chr7_1 | CDS | 67358816 | 67359064 | 67358816 | ID=Msa1032450-mRNA-1:cds;Parent=Msa1032450-mRNA-1 |
chr7_1 | CDS | 67360747 | 67361292 | 67360747 | ID=Msa1032450-mRNA-1:cds;Parent=Msa1032450-mRNA-1 |
chr7_1 | three_prime_UTR | 67361293 | 67361325 | 67361293 | ID=Msa1032450-mRNA-1:three_prime_utr;Parent=Msa1032450-mRNA-1 |
Gene Sequence |
Protein sequence |