AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1108690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1108690 MtrunA17_Chr7g0242561 98.762 323 1 1 67 389 211 530 0.0 660
Msa1108690 MtrunA17_Chr4g0059951 73.065 323 84 1 67 389 228 547 7.00e-174 496
Msa1108690 MtrunA17_Chr7g0257751 66.254 323 106 1 67 389 213 532 7.16e-157 452
Msa1108690 MtrunA17_Chr1g0173541 65.325 323 109 1 67 389 207 526 3.44e-156 450
Msa1108690 MtrunA17_Chr4g0033371 54.489 323 143 2 65 387 225 543 1.29e-130 385
Msa1108690 MtrunA17_Chr0c02g0489761 57.241 290 120 2 67 356 233 518 4.78e-115 345
Msa1108690 MtrunA17_Chr5g0441691 55.670 291 125 2 66 356 222 508 1.33e-114 344
Msa1108690 MtrunA17_Chr1g0170281 56.655 293 122 3 64 356 270 557 1.10e-110 335
Msa1108690 MtrunA17_Chr1g0200601 52.941 306 139 3 67 372 185 485 3.97e-110 332
Msa1108690 MtrunA17_Chr4g0074811 53.793 290 130 2 67 356 246 531 4.89e-110 333
Msa1108690 MtrunA17_Chr1g0176751 54.870 308 129 4 67 369 279 581 1.45e-109 333
Msa1108690 MtrunA17_Chr5g0444171 53.952 291 130 2 67 357 247 533 2.41e-109 331
Msa1108690 MtrunA17_Chr3g0131181 54.138 290 128 3 67 356 184 468 2.19e-108 328
Msa1108690 MtrunA17_Chr8g0387671 55.172 290 126 2 67 356 221 506 6.76e-108 326
Msa1108690 MtrunA17_Chr8g0385341 52.759 290 132 2 67 356 185 469 2.81e-106 322
Msa1108690 MtrunA17_Chr5g0448721 54.138 290 128 3 67 356 251 535 3.46e-106 323
Msa1108690 MtrunA17_Chr5g0397101 53.659 287 128 3 70 356 225 506 4.10e-104 317
Msa1108690 MtrunA17_Chr3g0098951 52.027 296 132 3 67 356 239 530 1.94e-103 316
Msa1108690 MtrunA17_Chr7g0267751 53.103 290 131 3 67 356 290 574 9.84e-102 313
Msa1108690 MtrunA17_Chr1g0157131 51.020 294 140 3 64 357 226 515 4.95e-101 309
Msa1108690 MtrunA17_Chr1g0176421 50.153 327 125 5 67 361 316 636 2.82e-100 310
Msa1108690 MtrunA17_Chr4g0074791 48.966 290 133 3 67 356 251 525 2.67e-90 281
Msa1108690 MtrunA17_Chr5g0405421 42.282 298 156 5 67 357 256 544 1.36e-75 244
Msa1108690 MtrunA17_Chr4g0045261 34.364 291 178 5 68 353 297 579 2.63e-52 183
Msa1108690 MtrunA17_Chr7g0256001 34.364 291 179 5 68 353 301 584 1.16e-50 179
Msa1108690 MtrunA17_Chr5g0402551 34.364 291 178 5 68 353 294 576 1.60e-50 178
Msa1108690 MtrunA17_Chr8g0374701 33.677 291 180 5 68 353 288 570 2.09e-50 178
Msa1108690 MtrunA17_Chr7g0267771 51.829 164 74 1 67 230 243 401 4.98e-50 175
Msa1108690 MtrunA17_Chr3g0127571 33.663 303 183 7 68 365 298 587 4.87e-47 169
Msa1108690 MtrunA17_Chr7g0276111 32.646 291 177 6 68 350 304 583 6.21e-46 166
Msa1108690 MtrunA17_Chr5g0444191 58.400 125 49 1 64 188 60 181 7.27e-45 154
Msa1108690 MtrunA17_Chr8g0355131 30.293 307 183 8 73 354 208 508 3.00e-33 130
Msa1108690 MtrunA17_Chr1g0190131 42.982 114 64 1 67 179 160 273 8.24e-28 110
Msa1108690 MtrunA17_Chr1g0203881 48.113 106 55 0 67 172 196 301 1.30e-27 114
Msa1108690 MtrunA17_Chr1g0188171 37.086 151 91 2 206 355 1 148 1.35e-23 95.9
Msa1108690 MtrunA17_Chr1g0166281 35.762 151 93 2 206 355 1 148 8.08e-23 93.6
Msa1108690 MtrunA17_Chr5g0441771 42.149 121 49 2 119 239 2 101 1.36e-22 91.3
Msa1108690 MtrunA17_Chr3g0132591 41.667 108 63 0 63 170 253 360 2.26e-22 98.6
Msa1108690 MtrunA17_Chr5g0440931 34.899 149 93 2 206 353 1 146 9.67e-22 90.5
Msa1108690 MtrunA17_Chr3g0093271 34.228 149 94 2 206 353 52 197 1.25e-21 91.7
Msa1108690 MtrunA17_Chr7g0254731 34.899 149 93 2 206 353 1 146 1.77e-21 90.1
Msa1108690 MtrunA17_Chr6g0460211 34.228 149 94 2 206 353 1 146 3.45e-21 89.0
Msa1108690 MtrunA17_Chr7g0274941 39.623 106 62 1 67 170 169 274 2.38e-20 90.5
Msa1108690 MtrunA17_Chr5g0441781 52.000 75 35 1 282 356 1 74 3.63e-18 79.0
Msa1108690 MtrunA17_Chr4g0001331 42.424 99 51 3 75 171 181 275 7.25e-17 82.0
Msa1108690 MtrunA17_Chr4g0062221 31.250 144 93 3 213 353 7 147 1.19e-16 77.0
Msa1108690 MtrunA17_Chr8g0366401 28.947 152 101 2 210 357 10 158 2.02e-16 76.3
Msa1108690 MtrunA17_Chr1g0185001 30.345 145 96 3 210 353 5 145 8.28e-16 73.9
Msa1108690 MtrunA17_Chr8g0351681 34.810 158 89 4 212 359 44 197 8.49e-16 75.5
Msa1108690 MtrunA17_Chr2g0304111 37.168 113 65 4 74 184 184 292 1.37e-15 78.2
Msa1108690 MtrunA17_Chr6g0453681 43.000 100 49 3 75 171 178 272 1.74e-15 77.8
Msa1108690 MtrunA17_Chr4g0069301 39.000 100 55 4 74 171 187 282 5.88e-15 76.3
Msa1108690 MtrunA17_Chr6g0468751 42.424 99 49 3 75 170 178 271 7.40e-15 75.9
Msa1108690 MtrunA17_Chr4g0013131 36.697 109 63 3 74 180 172 276 1.15e-14 75.5
Msa1108690 MtrunA17_Chr3g0140631 39.423 104 59 3 73 174 192 293 1.23e-14 73.9
Msa1108690 MtrunA17_Chr5g0398751 30.345 145 95 2 210 353 5 144 2.25e-14 70.1
Msa1108690 MtrunA17_Chr7g0245911 32.515 163 97 5 206 358 36 195 2.30e-14 71.2
Msa1108690 MtrunA17_Chr6g0482731 31.206 141 93 2 214 353 23 160 3.09e-14 70.5
Msa1108690 MtrunA17_Chr1g0185221 32.955 176 103 6 71 241 161 326 3.70e-14 73.9
Msa1108690 MtrunA17_Chr8g0353621 33.636 110 69 3 68 175 160 267 4.66e-14 72.0
Msa1108690 MtrunA17_Chr3g0125381 32.710 107 69 2 66 171 103 207 5.36e-14 70.9
Msa1108690 MtrunA17_Chr7g0274101 33.113 151 97 2 206 355 1 148 5.40e-14 68.9
Msa1108690 MtrunA17_Chr3g0132671 36.111 108 61 3 67 171 200 302 6.31e-14 73.2
Msa1108690 MtrunA17_Chr2g0333821 40.404 99 53 4 75 171 175 269 6.40e-14 72.8
Msa1108690 MtrunA17_Chr8g0351491 33.333 105 67 2 68 171 166 268 7.74e-14 71.2
Msa1108690 MtrunA17_Chr2g0302431 37.383 107 61 4 75 179 182 284 8.27e-14 72.8
Msa1108690 MtrunA17_Chr2g0284011 36.607 112 57 5 75 180 173 276 1.16e-13 72.0
Msa1108690 MtrunA17_Chr7g0260191 40.179 112 60 4 63 171 152 259 1.44e-13 72.4
Msa1108690 MtrunA17_Chr8g0391691 35.443 158 86 6 217 370 36 181 1.95e-13 68.6
Msa1108690 MtrunA17_Chr1g0170551 37.000 100 58 2 73 171 163 258 4.09e-13 71.2
Msa1108690 MtrunA17_Chr7g0245231 30.263 152 101 3 210 360 23 170 4.22e-13 67.0
Msa1108690 MtrunA17_Chr6g0453671 37.615 109 60 3 66 171 169 272 4.79e-13 70.1
Msa1108690 MtrunA17_Chr7g0244521 34.579 107 64 3 75 179 173 275 8.31e-13 69.7
Msa1108690 MtrunA17_Chr8g0380661 27.607 163 108 4 73 225 156 318 1.96e-12 67.8
Msa1108690 MtrunA17_Chr1g0190831 39.806 103 56 3 71 171 161 259 2.09e-12 68.6
Msa1108690 MtrunA17_Chr1g0169581 30.496 141 92 2 216 353 3 140 2.18e-12 64.3
Msa1108690 MtrunA17_Chr4g0008561 33.333 111 71 3 73 181 178 287 2.24e-12 68.6
Msa1108690 MtrunA17_Chr8g0392951 29.286 140 96 1 214 353 21 157 2.46e-12 64.7
Msa1108690 MtrunA17_Chr6g0478601 37.383 107 54 4 74 172 301 402 2.67e-12 68.2
Msa1108690 MtrunA17_Chr4g0025671 41.748 103 54 3 71 171 165 263 2.95e-12 68.6
Msa1108690 MtrunA17_Chr3g0116141 31.783 129 85 1 226 354 14 139 2.98e-12 63.9
Msa1108690 MtrunA17_Chr3g0116151 31.783 129 85 1 226 354 15 140 2.99e-12 63.9
Msa1108690 MtrunA17_Chr2g0321841 40.196 102 57 2 71 171 161 259 3.59e-12 68.2
Msa1108690 MtrunA17_Chr5g0428031 37.624 101 57 3 75 173 169 265 4.91e-12 67.0
Msa1108690 MtrunA17_Chr5g0434951 32.143 140 88 3 216 353 3 137 4.99e-12 63.2
Msa1108690 MtrunA17_Chr2g0277501 35.644 101 61 4 74 170 160 260 5.09e-12 66.6
Msa1108690 MtrunA17_Chr8g0368681 27.673 159 108 4 211 365 6 161 5.11e-12 63.5
Msa1108690 MtrunA17_Chr1g0153321 40.000 105 58 3 74 174 309 412 5.87e-12 67.0
Msa1108690 MtrunA17_Chr4g0033601 31.469 143 92 3 217 356 5 144 8.01e-12 62.8
Msa1108690 MtrunA17_Chr4g0064231 29.375 160 91 4 216 356 63 219 8.48e-12 64.3
Msa1108690 MtrunA17_Chr2g0299781 34.951 103 64 2 74 173 321 423 1.03e-11 66.2
Msa1108690 MtrunA17_Chr3g0135951 35.849 106 61 5 74 174 302 405 1.10e-11 66.2
Msa1108690 MtrunA17_Chr5g0402361 27.160 162 115 1 216 377 47 205 1.25e-11 65.5
Msa1108690 MtrunA17_Chr8g0385281 35.644 101 61 4 74 170 161 261 1.26e-11 65.5
Msa1108690 MtrunA17_Chr1g0167311 36.667 120 59 6 74 180 316 431 1.49e-11 65.9
Msa1108690 MtrunA17_Chr2g0290751 32.515 163 87 7 210 356 45 200 2.07e-11 63.2
Msa1108690 MtrunA17_Chr7g0225921 30.282 142 95 2 213 353 2 140 2.85e-11 61.2
Msa1108690 MtrunA17_Chr5g0432471 33.333 102 62 3 74 173 172 269 4.08e-11 64.3
Msa1108690 MtrunA17_Chr6g0450921 28.662 157 103 3 210 365 22 170 4.57e-11 61.2
Msa1108690 MtrunA17_Chr1g0167351 37.255 102 59 3 74 171 311 411 4.65e-11 64.3
Msa1108690 MtrunA17_Chr1g0161211 34.965 143 83 5 215 353 44 180 5.43e-11 61.6
Msa1108690 MtrunA17_Chr1g0187581 37.143 105 57 5 73 171 316 417 5.83e-11 63.9
Msa1108690 MtrunA17_Chr5g0399911 31.683 101 65 2 74 170 175 275 6.43e-11 63.2
Msa1108690 MtrunA17_Chr2g0290761 32.515 163 87 7 210 356 45 200 6.51e-11 61.6
Msa1108690 MtrunA17_Chr7g0227331 31.148 122 74 4 56 172 458 574 6.79e-11 63.9
Msa1108690 MtrunA17_Chr5g0428981 38.095 105 60 3 73 173 951 1054 7.26e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1108690 AT3G51850.1 87.616 323 37 1 67 389 209 528 0.0 592
Msa1108690 AT3G51850.2 86.861 274 33 1 67 340 209 479 7.79e-175 497
Msa1108690 AT1G74740.1 70.938 320 90 1 67 386 214 530 1.35e-165 475
Msa1108690 AT5G12480.2 67.385 325 100 3 67 389 120 440 4.02e-160 457
Msa1108690 AT5G19450.2 67.284 324 102 2 67 389 212 532 8.75e-159 457
Msa1108690 AT5G19450.1 67.284 324 102 2 67 389 212 532 8.75e-159 457
Msa1108690 AT5G12480.1 67.385 325 100 3 67 389 214 534 1.05e-158 457
Msa1108690 AT1G18890.1 68.438 320 98 1 67 386 218 534 2.57e-158 456
Msa1108690 AT3G57530.1 62.654 324 115 3 67 389 218 536 7.32e-149 432
Msa1108690 AT2G41860.1 61.755 319 119 1 67 385 209 524 8.73e-143 416
Msa1108690 AT2G41860.2 61.442 319 120 1 67 385 209 524 4.18e-142 415
Msa1108690 AT2G31500.1 57.547 318 129 3 67 381 221 535 1.72e-131 389
Msa1108690 AT3G51850.3 89.340 197 21 0 67 263 209 405 4.25e-126 370
Msa1108690 AT5G12180.1 59.655 290 113 2 67 356 228 513 3.93e-120 358
Msa1108690 AT5G19360.1 58.276 290 117 2 67 356 223 508 1.06e-117 352
Msa1108690 AT4G38230.1 53.741 294 131 2 67 360 35 323 1.93e-110 327
Msa1108690 AT4G38230.4 53.741 294 131 2 67 360 179 467 4.70e-109 328
Msa1108690 AT4G38230.3 53.741 294 131 2 67 360 179 467 4.70e-109 328
Msa1108690 AT1G35670.1 54.483 290 127 3 67 356 181 465 5.60e-109 329
Msa1108690 AT4G38230.2 53.741 294 131 2 67 360 209 497 1.33e-108 328
Msa1108690 AT3G10660.2 55.517 290 124 3 68 357 342 626 1.89e-108 332
Msa1108690 AT3G10660.1 55.517 290 124 3 68 357 342 626 1.89e-108 332
Msa1108690 AT4G09570.1 54.828 290 126 3 67 356 180 464 2.20e-108 327
Msa1108690 AT5G04870.1 55.208 288 124 3 70 357 308 590 2.34e-108 331
Msa1108690 AT4G23650.1 53.265 291 132 2 67 357 233 519 2.26e-107 326
Msa1108690 AT5G23580.1 55.556 288 123 2 67 354 177 459 4.95e-107 323
Msa1108690 AT2G17290.1 53.103 290 131 3 67 356 240 524 2.42e-106 323
Msa1108690 AT2G17290.2 53.103 290 131 3 67 356 240 524 2.42e-106 323
Msa1108690 AT4G04740.4 51.839 299 139 3 67 365 224 517 4.35e-106 322
Msa1108690 AT4G04740.6 51.839 299 139 3 67 365 224 517 4.35e-106 322
Msa1108690 AT4G04740.5 51.839 299 139 3 67 365 224 517 4.35e-106 322
Msa1108690 AT4G04740.3 51.839 299 139 3 67 365 224 517 4.35e-106 322
Msa1108690 AT4G04740.1 51.839 299 139 3 67 365 224 517 4.35e-106 322
Msa1108690 AT4G04740.7 51.839 299 139 3 67 365 224 517 4.35e-106 322
Msa1108690 AT4G21940.1 52.759 290 132 3 67 356 257 541 8.10e-106 323
Msa1108690 AT4G04720.2 52.577 291 133 3 67 357 235 520 1.15e-105 322
Msa1108690 AT4G04720.1 52.577 291 133 3 67 357 235 520 1.15e-105 322
Msa1108690 AT4G21940.2 52.759 290 132 3 67 356 257 541 1.17e-105 322
Msa1108690 AT4G35310.2 52.759 290 132 3 67 356 252 536 2.23e-105 322
Msa1108690 AT4G35310.1 52.759 290 132 3 67 356 252 536 2.23e-105 322
Msa1108690 AT1G50700.1 52.069 290 135 2 67 356 228 513 2.70e-104 318
Msa1108690 AT3G20410.2 49.333 300 148 2 67 366 246 541 3.18e-103 315
Msa1108690 AT3G20410.1 49.333 300 148 2 67 366 246 541 3.18e-103 315
Msa1108690 AT1G50700.2 48.882 313 136 2 67 356 228 539 4.20e-102 313
Msa1108690 AT1G76040.1 50.000 292 139 4 67 357 29 314 1.04e-100 301
Msa1108690 AT1G76040.4 50.000 292 139 4 67 357 29 314 1.04e-100 301
Msa1108690 AT2G38910.1 52.083 288 133 3 67 354 289 571 3.86e-99 306
Msa1108690 AT1G76040.2 49.485 291 142 3 67 357 267 552 1.27e-97 301
Msa1108690 AT4G04740.2 52.381 273 125 3 67 339 224 491 3.78e-96 297
Msa1108690 AT1G61950.1 50.865 289 138 2 67 355 254 538 1.12e-95 296
Msa1108690 AT4G04710.4 49.169 301 134 5 67 356 195 487 3.23e-94 291
Msa1108690 AT4G04710.3 50.000 290 133 4 67 356 181 458 4.00e-94 290
Msa1108690 AT4G04710.2 50.000 290 133 4 67 356 195 472 4.40e-94 290
Msa1108690 AT3G57530.2 64.796 196 69 0 67 262 218 413 2.56e-93 286
Msa1108690 AT4G04710.1 48.505 301 134 5 67 356 195 485 1.22e-92 287
Msa1108690 AT4G21940.3 54.583 240 105 2 67 306 257 492 5.30e-90 280
Msa1108690 AT1G50700.3 52.917 240 110 1 67 306 228 464 1.12e-87 273
Msa1108690 AT4G04695.1 45.578 294 155 3 67 360 187 475 2.19e-83 263
Msa1108690 AT1G76040.3 50.413 242 116 2 67 308 267 504 1.01e-81 259
Msa1108690 AT4G04700.1 45.329 289 153 3 67 355 187 470 2.65e-81 257
Msa1108690 AT2G17890.1 41.611 298 158 5 67 357 265 553 9.91e-76 245
Msa1108690 AT5G66210.1 42.000 300 154 6 67 357 219 507 7.92e-74 239
Msa1108690 AT5G66210.2 42.000 300 154 6 67 357 219 507 7.92e-74 239
Msa1108690 AT5G66210.3 43.629 259 132 4 67 316 219 472 9.07e-68 222
Msa1108690 AT2G35890.2 45.778 225 120 1 67 291 287 509 9.67e-68 223
Msa1108690 AT2G35890.1 45.778 225 120 1 67 291 287 509 9.67e-68 223
Msa1108690 AT5G66210.5 43.580 257 131 4 67 314 219 470 1.13e-67 221
Msa1108690 AT4G36070.1 37.919 298 169 5 67 357 228 516 6.19e-67 221
Msa1108690 AT4G36070.2 37.919 298 169 5 67 357 228 516 1.22e-66 221
Msa1108690 AT5G66210.6 44.444 198 109 1 67 263 219 416 1.26e-54 186
Msa1108690 AT5G66210.4 44.444 198 109 1 67 263 219 416 1.26e-54 186
Msa1108690 AT1G49580.1 31.959 291 186 4 68 353 310 593 7.49e-50 177
Msa1108690 AT3G50530.2 33.003 303 189 6 68 365 339 632 2.19e-49 176
Msa1108690 AT3G50530.1 33.003 303 189 6 68 365 308 601 2.26e-49 176
Msa1108690 AT3G19100.1 31.959 291 185 5 68 353 304 586 4.22e-49 175
Msa1108690 AT2G41140.1 34.364 291 178 6 68 353 283 565 1.22e-48 173
Msa1108690 AT3G56760.1 34.364 291 178 6 68 353 284 566 1.92e-48 173
Msa1108690 AT5G24430.1 30.795 302 192 6 68 364 303 592 1.73e-39 149
Msa1108690 AT2G46700.2 33.000 300 184 6 68 362 122 409 1.96e-39 145
Msa1108690 AT2G46700.3 33.000 300 184 6 68 362 122 409 1.96e-39 145
Msa1108690 AT2G46700.1 33.000 300 184 6 68 362 303 590 7.08e-38 144
Msa1108690 AT3G49370.1 32.941 255 152 4 68 313 302 546 8.56e-38 144
Msa1108690 AT1G12580.1 49.524 105 53 0 67 171 199 303 2.83e-28 116
Msa1108690 AT1G08650.1 42.342 111 63 1 64 173 166 276 1.66e-26 107
Msa1108690 AT1G12680.1 43.519 108 61 0 63 170 248 355 9.34e-25 105
Msa1108690 AT3G04530.1 41.818 110 63 1 65 173 163 272 3.50e-23 98.6
Msa1108690 AT3G43810.2 33.962 159 101 2 206 363 1 156 1.61e-22 95.1
Msa1108690 AT1G08650.2 40.777 103 60 1 64 165 166 268 2.02e-21 93.6
Msa1108690 AT1G66410.1 34.899 149 93 2 206 353 1 146 2.04e-21 90.1
Msa1108690 AT5G37780.1 34.899 149 93 2 206 353 1 146 2.04e-21 90.1
Msa1108690 AT2G27030.3 34.228 149 94 2 206 353 1 146 2.27e-21 90.9
Msa1108690 AT3G22930.1 35.172 145 90 2 210 353 28 169 2.40e-21 90.5
Msa1108690 AT3G56800.1 34.228 149 94 2 206 353 1 146 4.57e-21 89.4
Msa1108690 AT2G41110.1 34.228 149 94 2 206 353 1 146 4.57e-21 89.4
Msa1108690 AT2G27030.1 34.228 149 94 2 206 353 1 146 4.57e-21 89.4
Msa1108690 AT3G43810.1 34.228 149 94 2 206 353 1 146 4.76e-21 89.0
Msa1108690 AT5G21274.1 34.228 149 94 2 206 353 1 146 5.05e-21 89.0
Msa1108690 AT5G39440.1 41.121 107 58 2 67 172 170 272 6.83e-19 88.6
Msa1108690 AT4G14640.1 32.414 145 94 2 210 353 6 147 8.31e-19 83.2
Msa1108690 AT2G41110.2 31.677 161 94 3 206 353 1 158 1.75e-18 82.4
Msa1108690 AT5G37780.2 32.530 166 89 4 206 353 1 161 7.09e-18 80.9
Msa1108690 AT4G30960.1 38.793 116 64 5 75 187 185 296 1.56e-17 84.3
Msa1108690 AT1G30270.3 38.053 113 64 4 74 184 95 203 3.13e-17 83.2
Msa1108690 AT1G30270.1 38.393 112 63 4 75 184 193 300 4.39e-17 83.2
Msa1108690 AT1G30270.2 38.393 112 63 4 75 184 193 300 5.13e-17 82.8
Msa1108690 AT3G50360.1 31.973 147 94 4 210 354 20 162 2.49e-16 76.6
Msa1108690 AT5G37780.3 29.714 175 93 3 206 353 1 172 2.71e-16 76.6
Msa1108690 AT3G01090.2 39.516 124 66 4 67 186 193 311 4.34e-16 80.5
Msa1108690 AT3G01090.3 39.516 124 66 4 67 186 170 288 5.20e-16 80.1
Msa1108690 AT3G01090.1 39.516 124 66 4 67 186 170 288 5.20e-16 80.1
Msa1108690 AT1G66410.2 33.540 161 89 4 206 353 1 156 9.49e-16 74.7
Msa1108690 AT2G45490.1 36.893 103 62 2 69 170 173 273 1.40e-15 77.0
Msa1108690 AT5G10930.1 38.679 106 59 3 74 177 173 274 1.45e-15 78.6
Msa1108690 AT5G37780.4 34.921 126 74 3 231 353 13 133 1.50e-15 73.6
Msa1108690 AT1G18530.1 29.139 151 100 3 213 359 3 150 1.68e-15 73.9
Msa1108690 AT4G14640.2 32.258 124 80 2 231 353 9 129 2.35e-15 72.8
Msa1108690 AT3G59440.1 29.577 142 95 2 217 356 51 189 2.38e-15 74.3
Msa1108690 AT1G62820.1 32.653 147 93 2 208 353 4 145 2.58e-15 73.2
Msa1108690 AT3G29160.3 42.574 101 50 3 75 172 179 274 3.20e-15 76.6
Msa1108690 AT1G24620.1 35.811 148 85 6 214 357 34 175 5.99e-15 73.2
Msa1108690 AT3G29160.1 40.367 109 57 3 67 172 171 274 8.45e-15 76.3
Msa1108690 AT3G29160.2 40.367 109 57 3 67 172 171 274 8.45e-15 76.3
Msa1108690 AT2G25880.2 38.835 103 59 3 73 173 148 248 1.78e-14 73.2
Msa1108690 AT1G01140.3 36.449 107 62 4 74 178 180 282 2.10e-14 74.7
Msa1108690 AT1G01140.1 36.449 107 62 4 74 178 180 282 2.31e-14 74.7
Msa1108690 AT2G25880.4 38.835 103 59 3 73 173 193 293 2.65e-14 73.6
Msa1108690 AT4G37010.1 30.137 146 98 2 210 354 20 162 2.75e-14 70.9
Msa1108690 AT4G37010.2 30.137 146 98 2 210 354 24 166 2.82e-14 70.9
Msa1108690 AT1G76640.1 34.000 150 83 4 213 354 18 159 2.89e-14 70.5
Msa1108690 AT2G25880.1 38.835 103 59 3 73 173 180 280 2.97e-14 73.2
Msa1108690 AT1G01140.2 35.514 107 65 3 74 178 180 284 3.25e-14 74.3
Msa1108690 AT2G41100.7 28.488 172 102 3 200 353 49 217 3.49e-14 72.8
Msa1108690 AT2G41100.6 28.488 172 102 3 200 353 49 217 3.49e-14 72.8
Msa1108690 AT2G41100.3 28.488 172 102 3 200 353 49 217 3.49e-14 72.8
Msa1108690 AT3G43810.4 36.190 105 63 2 250 353 9 110 3.81e-14 68.9
Msa1108690 AT3G43810.3 36.190 105 63 2 250 353 9 110 3.81e-14 68.9
Msa1108690 AT2G25880.3 38.835 103 59 3 73 173 241 341 4.32e-14 73.2
Msa1108690 AT2G26980.5 38.679 106 59 4 74 177 175 276 4.57e-14 73.6
Msa1108690 AT2G26980.1 39.048 105 58 4 75 177 176 276 4.80e-14 73.6
Msa1108690 AT1G12310.1 30.612 147 96 2 208 353 4 145 5.38e-14 69.3
Msa1108690 AT2G26980.3 39.048 105 58 4 75 177 176 276 5.52e-14 73.6
Msa1108690 AT1G66410.4 36.190 105 63 2 250 353 9 110 5.93e-14 68.2
Msa1108690 AT1G66410.3 36.190 105 63 2 250 353 9 110 5.93e-14 68.2
Msa1108690 AT4G32830.1 39.806 103 58 3 73 173 186 286 6.35e-14 72.0
Msa1108690 AT1G48260.2 40.196 102 53 4 74 172 87 183 6.95e-14 72.8
Msa1108690 AT1G48260.4 40.196 102 53 4 74 172 87 183 6.95e-14 72.8
Msa1108690 AT1G48260.3 40.196 102 53 4 74 172 87 183 6.95e-14 72.8
Msa1108690 AT1G48260.5 40.196 102 53 4 74 172 87 183 6.95e-14 72.8
Msa1108690 AT2G26980.4 39.048 105 58 4 75 177 186 286 7.06e-14 73.2
Msa1108690 AT2G41100.4 28.488 172 102 3 200 353 84 252 7.29e-14 72.4
Msa1108690 AT2G41100.4 26.111 180 113 3 206 368 1 177 1.06e-12 68.9
Msa1108690 AT2G41100.1 28.488 172 102 3 200 353 84 252 7.29e-14 72.4
Msa1108690 AT2G41100.1 26.111 180 113 3 206 368 1 177 1.06e-12 68.9
Msa1108690 AT3G63280.2 39.806 103 56 3 71 171 161 259 8.55e-14 73.2
Msa1108690 AT3G63280.3 39.806 103 56 3 71 171 161 259 8.55e-14 73.2
Msa1108690 AT3G63280.1 39.806 103 56 3 71 171 161 259 8.55e-14 73.2
Msa1108690 AT1G48260.1 40.196 102 53 4 74 172 172 268 8.99e-14 72.8
Msa1108690 AT3G63280.4 39.806 103 56 3 71 171 215 313 1.03e-13 73.2
Msa1108690 AT5G45820.1 35.185 108 64 4 75 180 173 276 1.05e-13 72.8
Msa1108690 AT5G25110.1 37.143 105 60 4 75 177 204 304 1.16e-13 72.8
Msa1108690 AT5G45810.1 36.111 108 63 3 70 175 184 287 2.38e-13 71.6
Msa1108690 AT2G43290.1 29.730 148 93 3 217 356 65 209 4.42e-13 68.6
Msa1108690 AT3G23000.1 35.965 114 67 4 62 173 174 283 4.49e-13 70.9
Msa1108690 AT3G22930.2 34.286 105 65 2 210 313 28 129 6.16e-13 65.9
Msa1108690 AT4G18700.1 34.259 108 65 3 70 175 182 285 9.80e-13 69.7
Msa1108690 AT5G37770.1 31.293 147 93 3 215 356 15 158 1.05e-12 66.2
Msa1108690 AT5G37770.2 31.293 147 93 3 215 356 15 158 1.05e-12 66.2
Msa1108690 AT4G14640.3 31.481 108 70 2 210 316 6 110 1.09e-12 65.1
Msa1108690 AT1G45160.2 37.736 106 53 4 74 171 856 956 1.13e-12 70.1
Msa1108690 AT1G45160.1 37.736 106 53 4 74 171 856 956 1.24e-12 70.1
Msa1108690 AT1G05990.1 30.405 148 88 4 217 356 5 145 1.39e-12 65.5
Msa1108690 AT3G25600.1 26.974 152 104 3 212 359 7 155 1.62e-12 65.5
Msa1108690 AT2G30360.1 34.000 100 60 4 73 170 182 277 2.03e-12 68.6
Msa1108690 AT1G48490.3 34.959 123 67 4 58 172 996 1113 2.20e-12 69.3
Msa1108690 AT1G48490.2 34.959 123 67 4 58 172 996 1113 2.20e-12 69.3
Msa1108690 AT1G48490.1 34.959 123 67 4 58 172 996 1113 2.20e-12 69.3
Msa1108690 AT1G48490.4 34.959 123 67 4 58 172 997 1114 2.22e-12 69.3
Msa1108690 AT5G01810.1 33.663 101 61 3 75 173 173 269 2.33e-12 68.6
Msa1108690 AT5G01810.2 33.663 101 61 3 75 173 173 269 2.33e-12 68.6
Msa1108690 AT5G01810.3 33.663 101 61 3 75 173 173 269 3.12e-12 67.8
Msa1108690 AT1G03920.1 36.538 104 63 3 74 174 336 439 3.39e-12 68.6
Msa1108690 AT1G03920.3 36.538 104 63 3 74 174 336 439 3.39e-12 68.6
Msa1108690 AT1G03920.2 36.538 104 63 3 74 174 223 326 3.77e-12 68.2
Msa1108690 AT4G40010.1 37.624 101 59 4 74 170 160 260 3.83e-12 67.4
Msa1108690 AT1G64480.4 33.557 149 78 7 214 348 35 176 3.93e-12 65.5
Msa1108690 AT5G09890.2 39.423 104 58 3 74 173 305 407 4.97e-12 67.8
Msa1108690 AT5G09890.1 39.423 104 58 3 74 173 305 407 5.05e-12 67.8
Msa1108690 AT1G64480.2 33.557 149 78 7 214 348 35 176 5.99e-12 65.1
Msa1108690 AT1G64480.3 33.557 149 78 7 214 348 35 176 5.99e-12 65.1
Msa1108690 AT1G64480.1 33.557 149 78 7 214 348 35 176 5.99e-12 65.1
Msa1108690 AT3G03000.1 30.000 150 100 3 210 357 13 159 6.25e-12 63.9
Msa1108690 AT1G66400.1 33.108 148 81 5 215 353 13 151 6.89e-12 63.5
Msa1108690 AT4G03290.1 30.137 146 93 3 217 356 5 147 8.09e-12 63.5
Msa1108690 AT1G50240.3 35.577 104 62 2 73 175 162 261 8.22e-12 67.8
Msa1108690 AT1G50240.2 35.577 104 62 2 73 175 162 261 8.22e-12 67.8
Msa1108690 AT2G20050.2 34.454 119 67 4 63 174 925 1039 8.50e-12 67.4
Msa1108690 AT2G20050.1 34.454 119 67 4 63 174 928 1042 8.51e-12 67.4
Msa1108690 AT5G62310.1 39.362 94 47 3 73 161 943 1031 9.21e-12 67.4
Msa1108690 AT5G08590.1 36.449 107 63 5 74 175 160 266 1.19e-11 65.9
Msa1108690 AT5G08590.2 36.449 107 63 5 74 175 84 190 1.33e-11 65.1
Msa1108690 AT1G76650.1 31.973 147 86 4 212 354 41 177 1.75e-11 62.8
Msa1108690 AT1G76650.3 31.973 147 86 4 212 354 41 177 1.75e-11 62.8
Msa1108690 AT3G17850.1 36.449 107 58 3 65 166 1063 1164 1.93e-11 66.6
Msa1108690 AT1G53570.6 36.697 109 65 3 75 181 375 481 1.99e-11 65.9
Msa1108690 AT4G33080.2 37.500 104 61 3 74 173 302 405 2.01e-11 65.9
Msa1108690 AT1G53570.7 36.697 109 65 3 75 181 375 481 2.01e-11 65.9
Msa1108690 AT4G33080.1 37.500 104 61 3 74 173 302 405 2.03e-11 65.9
Msa1108690 AT3G44200.2 38.835 103 57 3 71 171 165 263 2.31e-11 66.2
Msa1108690 AT3G44200.1 38.835 103 57 3 71 171 165 263 2.31e-11 66.2
Msa1108690 AT2G41090.1 29.801 151 95 4 206 353 1 143 3.80e-11 62.4
Msa1108690 AT1G32250.1 27.273 154 102 4 210 356 9 159 3.94e-11 61.6
Msa1108690 AT1G18210.2 29.577 142 86 4 216 353 22 153 4.25e-11 61.6
Msa1108690 AT1G18210.1 29.577 142 86 4 216 353 22 153 4.25e-11 61.6
Msa1108690 AT1G53570.1 36.697 109 65 3 75 181 375 481 4.61e-11 65.1
Msa1108690 AT1G53570.4 36.697 109 65 3 75 181 375 481 4.69e-11 64.7
Msa1108690 AT1G53570.2 36.697 109 65 3 75 181 375 481 4.69e-11 64.7
Msa1108690 AT1G53570.3 36.697 109 65 3 75 181 375 481 4.69e-11 64.7
Msa1108690 AT3G61960.1 29.787 141 90 3 74 205 170 310 4.85e-11 64.7
Msa1108690 AT1G53570.5 36.697 109 65 3 75 181 349 455 5.04e-11 64.7
Msa1108690 AT3G61960.2 29.710 138 88 3 74 202 170 307 5.56e-11 64.7
Msa1108690 AT2G15680.1 29.730 148 96 3 210 355 43 184 5.90e-11 61.6
Msa1108690 AT4G12860.1 29.932 147 89 4 217 356 5 144 8.20e-11 60.5
Msa1108690 AT2G38490.1 35.922 103 60 4 73 173 187 285 8.86e-11 63.5
Msa1108690 AT1G30640.3 34.746 118 65 4 74 180 231 347 9.37e-11 63.5
Msa1108690 AT5G63650.1 34.821 112 68 5 74 180 160 271 9.67e-11 63.2

Find 127 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGGATCTGTCTCAATTTC+TGG 0.097719 7_3:+51866478 None:intergenic
GCTTCTTTGTGATGATTATT+TGG 0.154592 7_3:-51862343 Msa1108690:three_prime_UTR
ATCCTACTCTACTAATATTT+TGG 0.160788 7_3:-51862047 Msa1108690:three_prime_UTR
ATGCAAACCTCTCAGCAATT+TGG 0.171724 7_3:+51866459 None:intergenic
CCTTGTCTGTGTCTACTTCT+TGG 0.208393 7_3:+51862664 None:intergenic
AACAAAGGGTGTGTATATTT+TGG 0.220052 7_3:+51862259 None:intergenic
CCATTTCCCTTCATTTAAAA+AGG 0.223413 7_3:-51862827 Msa1108690:CDS
ATGTACTTGTTCTTGAACTA+TGG 0.229289 7_3:-51861952 Msa1108690:three_prime_UTR
AGAAGCCAAGTCCAGGATTT+AGG 0.243770 7_3:+51862360 None:intergenic
TAATTATTACCAGCCCAAAA+TGG 0.248270 7_3:+51864618 None:intergenic
TTGGAGCCTTCTTAGCATTC+TGG 0.258928 7_3:+51863487 None:intergenic
GTCATGGCAGCTTCCGCTTC+TGG 0.266010 7_3:-51866646 Msa1108690:CDS
GCACTCCATATATCTATTTC+AGG 0.266017 7_3:+51864678 None:intergenic
GGTTTGCTATAAAAGTATTT+AGG 0.266192 7_3:+51866499 None:intergenic
TAACATCCAGCCTTCTCTTC+TGG 0.269260 7_3:-51862176 Msa1108690:three_prime_UTR
TTTAGCACTTTCAGAAATAC+TGG 0.274916 7_3:+51864022 None:intergenic
TGTTGGAAGTCCATATTATA+TGG 0.284645 7_3:-51864730 Msa1108690:CDS
CTTGTCTTGCAGAGCATCCT+TGG 0.293697 7_3:-51863512 Msa1108690:intron
GATGTCTTCAACTTCTTCAT+TGG 0.314100 7_3:+51863284 None:intergenic
ATTCCCGTCCTTGTCAAAAT+AGG 0.329817 7_3:+51862770 None:intergenic
GTGATAATCTTGACATTGTT+TGG 0.333375 7_3:-51866567 Msa1108690:CDS
CAAGAACAAGTACATCTTAC+AGG 0.345262 7_3:+51861960 None:intergenic
ACCTCTGGAGCCATATAATA+TGG 0.352657 7_3:+51864720 None:intergenic
TCCAGCCTTCTCTTCTGGTT+TGG 0.359180 7_3:-51862171 Msa1108690:three_prime_UTR
TGCAAACCTCTCAGCAATTT+GGG 0.359854 7_3:+51866460 None:intergenic
TTGGCCGTTAATCGAAGCTT+AGG 0.367905 7_3:+51863969 None:intergenic
AAAGATGGTTCTTTAAACTT+AGG 0.374121 7_3:-51862447 Msa1108690:CDS
TTGTATTCTGTACTCAGATT+TGG 0.376613 7_3:-51862083 Msa1108690:three_prime_UTR
AATTATTACCAGCCCAAAAT+GGG 0.377362 7_3:+51864619 None:intergenic
AAGGCATTCCGTAGCTCTTC+TGG 0.378333 7_3:+51862735 None:intergenic
GAACATACCAAGCACTTGTT+TGG 0.379659 7_3:+51863950 None:intergenic
TATTTGGTTCCTCGTTAGAT+AGG 0.382748 7_3:-51862327 Msa1108690:three_prime_UTR
ATGGACCTGAAATAGATATA+TGG 0.387032 7_3:-51864683 Msa1108690:CDS
AGGCTGGATGTTAAAATGAT+TGG 0.392490 7_3:+51862186 None:intergenic
AGACCCTAAGCTTCGATTAA+CGG 0.408641 7_3:-51863973 Msa1108690:CDS
GTTTATTGAAGCTGTGAGTA+TGG 0.409785 7_3:-51863148 Msa1108690:intron
TTTGTGGCTATGATGAAAAC+TGG 0.410674 7_3:-51862540 Msa1108690:CDS
CAAAGAGATGTTCAAGAAGA+TGG 0.417275 7_3:-51863262 Msa1108690:CDS
ACATCACCAAGAGGAACATT+TGG 0.419493 7_3:+51863468 None:intergenic
TCCATTGAAGAACTAAAAGT+TGG 0.425574 7_3:-51863216 Msa1108690:CDS
TGACATCAGGTAGATAATAA+TGG 0.428167 7_3:-51862882 Msa1108690:intron
GATTCAAAAGAAAAGCCCTT+AGG 0.428179 7_3:-51863407 Msa1108690:CDS
AGCTTAAAGTTAATGAAAGA+TGG 0.438081 7_3:-51862462 Msa1108690:CDS
TAGTTCCGCTTGAGCACCTC+TGG 0.438830 7_3:+51864705 None:intergenic
ACTGGAAGGATCCCAGCTTC+TGG 0.439011 7_3:-51866534 Msa1108690:CDS
GAGGTGCTCAAGCGGAACTA+TGG 0.441551 7_3:-51864702 Msa1108690:CDS
AATCAGCTATGATGAATTTG+TGG 0.443183 7_3:-51862556 Msa1108690:CDS
AAGCTTATGCACTTAAATAG+TGG 0.445494 7_3:+51861886 None:intergenic
TTCGTGACTCAGACAACAAC+AGG 0.452191 7_3:+51862294 None:intergenic
TGGAATACACAGCCATTCTC+TGG 0.460129 7_3:+51862024 None:intergenic
TCAGACAACAACAGGTGAAA+AGG 0.466563 7_3:+51862302 None:intergenic
GAGAAATTCTCAGAAATTGT+TGG 0.468312 7_3:-51864747 Msa1108690:CDS
ATTCAAAAGAAAAGCCCTTA+GGG 0.469497 7_3:-51863406 Msa1108690:intron
TTGTTTGGCAATTTAATCAC+TGG 0.470430 7_3:-51866552 Msa1108690:CDS
TAAACATCAATAAGATATCA+TGG 0.470983 7_3:+51862004 None:intergenic
CAAGTTGAGACTGATGGTTT+CGG 0.475139 7_3:+51863190 None:intergenic
GAGGGCTTATAGATTTCAAA+CGG 0.476470 7_3:-51864055 Msa1108690:CDS
ATTGATTGAACACCAGAAGC+TGG 0.477194 7_3:+51866522 None:intergenic
TCAGGTAGATAATAATGGTA+AGG 0.478694 7_3:-51862877 Msa1108690:intron
CGGAATGCCTTGATGGAAGA+TGG 0.482627 7_3:-51862723 Msa1108690:CDS
GTAATAGTCCTCCTAAATCC+TGG 0.492282 7_3:-51862371 Msa1108690:three_prime_UTR
AGAGCTACGGAATGCCTTGA+TGG 0.498848 7_3:-51862730 Msa1108690:CDS
GTTGCACAAGCTATTCTTCG+AGG 0.503971 7_3:-51864074 Msa1108690:CDS
GAAATAGATATATGGAGTGC+AGG 0.506175 7_3:-51864675 Msa1108690:CDS
TAGATTTCAAACGGGAACCT+TGG 0.507168 7_3:-51864046 Msa1108690:CDS
TGATGAAAACTGGAACGGAT+TGG 0.508931 7_3:-51862530 Msa1108690:CDS
GTCCTCCTAAATCCTGGACT+TGG 0.511360 7_3:-51862365 Msa1108690:three_prime_UTR
ATTTGGTTCCTCGTTAGATA+GGG 0.511673 7_3:-51862326 Msa1108690:three_prime_UTR
GTTAATCGAAGCTTAGGGTC+TGG 0.511744 7_3:+51863975 None:intergenic
GGTAAGGGAACACTAGATTA+CGG 0.514371 7_3:-51862861 Msa1108690:CDS
TTGGTGATGTTGTCAAGTCA+AGG 0.515370 7_3:-51863455 Msa1108690:CDS
TGGCCGTTAATCGAAGCTTA+GGG 0.516009 7_3:+51863970 None:intergenic
ATCACAAAGAAGCCAAGTCC+AGG 0.523189 7_3:+51862353 None:intergenic
AACTGGAACGGATTGGAGAA+AGG 0.523785 7_3:-51862523 Msa1108690:CDS
TTCTTAGCATTCTGGAGCCA+AGG 0.524983 7_3:+51863495 None:intergenic
AAATATTAGTAGAGTAGGAT+AGG 0.526709 7_3:+51862050 None:intergenic
TTGGCTCCAGAATGCTAAGA+AGG 0.530192 7_3:-51863493 Msa1108690:CDS
AAGGCTCCAAATGTTCCTCT+TGG 0.531788 7_3:-51863474 Msa1108690:CDS
AAGTCTTGTTAAGCAAATGT+TGG 0.532743 7_3:-51864000 Msa1108690:CDS
AGGAGGACTATTACACTATG+TGG 0.534144 7_3:+51862380 None:intergenic
AGGGCTTATAGATTTCAAAC+GGG 0.537352 7_3:-51864054 Msa1108690:CDS
GTTGTCTGAGTCACGAAGGA+AGG 0.550360 7_3:-51862288 Msa1108690:three_prime_UTR
ATCTTATTGATGTTTACTGT+AGG 0.556762 7_3:-51861997 Msa1108690:three_prime_UTR
ATCAGTTCCATCTTCCATCA+AGG 0.557877 7_3:+51862716 None:intergenic
TTGATTGAACACCAGAAGCT+GGG 0.564677 7_3:+51866523 None:intergenic
CAGGTAGATAATAATGGTAA+GGG 0.565450 7_3:-51862876 Msa1108690:CDS
TTGCACAAGCTATTCTTCGA+GGG 0.566710 7_3:-51864073 Msa1108690:CDS
GGCCAAAATATTAGTAGAGT+AGG 0.567214 7_3:+51862045 None:intergenic
AACAATGTCAAGATTATCAC+CGG 0.571782 7_3:+51866570 None:intergenic
TTGTCTGAGTCACGAAGGAA+GGG 0.574387 7_3:-51862287 Msa1108690:three_prime_UTR
CATTGCCAAACCAGAAGAGA+AGG 0.576867 7_3:+51862166 None:intergenic
GCCAAACCAGAAGAGAAGGC+TGG 0.577884 7_3:+51862170 None:intergenic
ACTCAGCAAGTTGAGACTGA+TGG 0.583406 7_3:+51863184 None:intergenic
TTAACGGCCAAACAAGTGCT+TGG 0.587749 7_3:-51863957 Msa1108690:intron
TGTTTCACACAAGTAACAAA+GGG 0.587965 7_3:+51862245 None:intergenic
TTGGCAATTTAATCACTGGA+AGG 0.589936 7_3:-51866548 Msa1108690:CDS
CTTTCAGAAATACTGGGCCA+AGG 0.590305 7_3:+51864029 None:intergenic
CATGTGCTCAAAGACATAAG+TGG 0.591827 7_3:-51866594 Msa1108690:CDS
GTTTGATTGAACACCAGAAG+CGG 0.592693 7_3:+51866633 None:intergenic
GTCCTTGTCAAAATAGGAGA+AGG 0.597343 7_3:+51862776 None:intergenic
ATATTGAACCAGAAGAGCTA+CGG 0.602723 7_3:-51862743 Msa1108690:CDS
TTAGCACTTTCAGAAATACT+GGG 0.602813 7_3:+51864023 None:intergenic
GCAGTCTGATTGTTTATCCG+AGG 0.605363 7_3:-51862123 Msa1108690:three_prime_UTR
ATTGAATATAAGCAAACACT+TGG 0.605719 7_3:+51862411 None:intergenic
ATTATTACCAGCCCAAAATG+GGG 0.612575 7_3:+51864620 None:intergenic
AGCCAAGTCCAGGATTTAGG+AGG 0.615105 7_3:+51862363 None:intergenic
ATGCAATGAACCAACCCTAA+GGG 0.616435 7_3:+51863392 None:intergenic
GCTCAAAGACATAAGTGGAC+CGG 0.617444 7_3:-51866589 Msa1108690:CDS
TCCATATTATATGGCTCCAG+AGG 0.617671 7_3:-51864721 Msa1108690:CDS
TGGCTCCAGAGGTGCTCAAG+CGG 0.618705 7_3:-51864710 Msa1108690:CDS
CCTAATGCAGAATCTGAGCA+AGG 0.620432 7_3:-51864098 Msa1108690:intron
AAGATGGATACTGATAATGA+TGG 0.624647 7_3:-51863246 Msa1108690:CDS
GTGTTTCACACAAGTAACAA+AGG 0.628224 7_3:+51862244 None:intergenic
ACTACAAGATATTCACACCT+CGG 0.648369 7_3:+51862106 None:intergenic
CCAAGAAGTAGACACAGACA+AGG 0.657425 7_3:-51862664 Msa1108690:intron
GGCTATGATGAAAACTGGAA+CGG 0.659519 7_3:-51862535 Msa1108690:CDS
GCTTCTCGACATTACTCACG+TGG 0.659695 7_3:-51862501 Msa1108690:CDS
TTTGTTACTTGTGTGAAACA+CGG 0.663832 7_3:-51862242 Msa1108690:intron
ATACTCTATATCTTATTGTG+CGG 0.673830 7_3:-51864648 Msa1108690:CDS
AAATGACGAGCATCTTCACA+AGG 0.673979 7_3:-51862799 Msa1108690:CDS
GACTTGACAACATCACCAAG+AGG 0.675943 7_3:+51863459 None:intergenic
TGTCTGAGTCACGAAGGAAG+GGG 0.687600 7_3:-51862286 Msa1108690:three_prime_UTR
ACAGATCCCAAATTGCTGAG+AGG 0.693640 7_3:-51866466 Msa1108690:intron
TTATTACCAGCCCAAAATGG+GGG 0.698731 7_3:+51864621 None:intergenic
TGTTGTTGTCTGAGTCACGA+AGG 0.713557 7_3:-51862292 Msa1108690:three_prime_UTR
GAAAAGGACCCTATCTAACG+AGG 0.725553 7_3:+51862318 None:intergenic
CTTCTCGACATTACTCACGT+GGG 0.738829 7_3:-51862500 Msa1108690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAATCTTATAAAACTT+GGG - chr7_3:51862669-51862688 Msa1108690:CDS 10.0%
!! CAAATAATTAAAATAGTAAT+TGG + chr7_3:51863246-51863265 None:intergenic 10.0%
!! TATAAACAAAATATTATCAC+AGG + chr7_3:51862476-51862495 None:intergenic 15.0%
!!! CAAGTTTTATAAGATTTATT+TGG + chr7_3:51862670-51862689 None:intergenic 15.0%
!! CAAATAAATCTTATAAAACT+TGG - chr7_3:51862668-51862687 Msa1108690:CDS 15.0%
!!! ATTTTTTTTTCAAAATCTTC+CGG + chr7_3:51863187-51863206 None:intergenic 15.0%
!! AAAAAAATATAAAGCTAATG+TGG - chr7_3:51863199-51863218 Msa1108690:CDS 15.0%
!! AAAAAATATAAAGCTAATGT+GGG - chr7_3:51863200-51863219 Msa1108690:CDS 15.0%
!!! AAGATTTACTATTTTAATAC+TGG - chr7_3:51863338-51863357 Msa1108690:intron 15.0%
!! AAAAAAAATACAGAAAACAT+GGG + chr7_3:51864183-51864202 None:intergenic 15.0%
!! TAATAATTAGAAATCAGTTA+TGG - chr7_3:51864942-51864961 Msa1108690:intron 15.0%
!!! AAGTGCATTTTAATTTATAT+CGG - chr7_3:51865182-51865201 Msa1108690:intron 15.0%
!! CAAAAAGTTATATGAAATAG+CGG - chr7_3:51862260-51862279 Msa1108690:three_prime_UTR 20.0%
!! ATCAAATTACATCACAAATT+AGG + chr7_3:51862428-51862447 None:intergenic 20.0%
!! AAATTAGTACATTAACAGTA+TGG - chr7_3:51862545-51862564 Msa1108690:CDS 20.0%
!! TTATTTGTAAGAGAAGAAAT+TGG - chr7_3:51862981-51863000 Msa1108690:intron 20.0%
!! AAATTGAAATGCTGAAAAAA+TGG + chr7_3:51863075-51863094 None:intergenic 20.0%
!! TTTAATTATTTGAACCCAAT+AGG - chr7_3:51863254-51863273 Msa1108690:CDS 20.0%
!! GTAGTTAATACCAAAATAAT+CGG + chr7_3:51863280-51863299 None:intergenic 20.0%
!!! TACTATTTTAATACTGGAAA+TGG - chr7_3:51863344-51863363 Msa1108690:intron 20.0%
!! GAAAAAAAATACAGAAAACA+TGG + chr7_3:51864184-51864203 None:intergenic 20.0%
!!! TTTTTTGAATATTATGACCA+TGG + chr7_3:51864618-51864637 None:intergenic 20.0%
!! TAAAGAAAACAAAGATACAA+AGG + chr7_3:51864847-51864866 None:intergenic 20.0%
!! TTAATATGAAAACAGATCAT+AGG + chr7_3:51865538-51865557 None:intergenic 20.0%
!! AAGAACTTAAGAACAATTTA+CGG + chr7_3:51865606-51865625 None:intergenic 20.0%
!! TAAACATCAATAAGATATCA+TGG + chr7_3:51866533-51866552 None:intergenic 20.0%
!!! GGTTTGCTATAAAAGTATTT+AGG + chr7_3:51862038-51862057 None:intergenic 25.0%
!!! CGCTATTTCATATAACTTTT+TGG + chr7_3:51862262-51862281 None:intergenic 25.0%
! ACATTAGGATTATTTGTAGT+GGG - chr7_3:51862370-51862389 Msa1108690:three_prime_UTR 25.0%
! ATACAACATCAACTTATAAG+GGG + chr7_3:51862702-51862721 None:intergenic 25.0%
! CATACAACATCAACTTATAA+GGG + chr7_3:51862703-51862722 None:intergenic 25.0%
!!! TATTTTGGTATTAACTACTG+AGG - chr7_3:51863282-51863301 Msa1108690:CDS 25.0%
! AAATAGTAAATCTTGTGTAG+TGG + chr7_3:51863332-51863351 None:intergenic 25.0%
!!! TGGAAAGTATCTTCAATTAA+GGG + chr7_3:51863479-51863498 None:intergenic 25.0%
! TTGATATACAGAATAGTTTC+TGG + chr7_3:51863499-51863518 None:intergenic 25.0%
! TAATACAATGTTCTATCAGA+TGG + chr7_3:51863660-51863679 None:intergenic 25.0%
!! TATTTTCCATAATTGTCTTG+TGG - chr7_3:51863743-51863762 Msa1108690:intron 25.0%
!! ATTTTCCATAATTGTCTTGT+GGG - chr7_3:51863744-51863763 Msa1108690:intron 25.0%
! ATACTCTATATCTTATTGTG+CGG - chr7_3:51863886-51863905 Msa1108690:intron 25.0%
! ATAATTATTAAGACCCAGAA+AGG + chr7_3:51864739-51864758 None:intergenic 25.0%
! AACAAAGATACAAAGGAAAA+AGG + chr7_3:51864840-51864859 None:intergenic 25.0%
! ACAATAAGCTAGAAGAAAAA+GGG + chr7_3:51865420-51865439 None:intergenic 25.0%
!! TTTTTCTTTACATGTAGTCA+TGG - chr7_3:51865907-51865926 Msa1108690:intron 25.0%
! AGTTGTTCAAGAATTTAAGA+TGG + chr7_3:51865946-51865965 None:intergenic 25.0%
! TTAAATTCTTGAACAACTAC+AGG - chr7_3:51865948-51865967 Msa1108690:intron 25.0%
! AGCTTAAAGTTAATGAAAGA+TGG - chr7_3:51866072-51866091 Msa1108690:intron 25.0%
! AAAGATGGTTCTTTAAACTT+AGG - chr7_3:51866087-51866106 Msa1108690:intron 25.0%
! ATTGAATATAAGCAAACACT+TGG + chr7_3:51866126-51866145 None:intergenic 25.0%
! AAATATTAGTAGAGTAGGAT+AGG + chr7_3:51866487-51866506 None:intergenic 25.0%
!! ATCCTACTCTACTAATATTT+TGG - chr7_3:51866487-51866506 Msa1108690:CDS 25.0%
! ATCTTATTGATGTTTACTGT+AGG - chr7_3:51866537-51866556 Msa1108690:CDS 25.0%
AACAATGTCAAGATTATCAC+CGG + chr7_3:51861967-51861986 None:intergenic 30.0%
GTGATAATCTTGACATTGTT+TGG - chr7_3:51861967-51861986 Msa1108690:three_prime_UTR 30.0%
TTGTTTGGCAATTTAATCAC+TGG - chr7_3:51861982-51862001 Msa1108690:three_prime_UTR 30.0%
ACTTTGTGAATGTAATGAAG+TGG - chr7_3:51862112-51862131 Msa1108690:three_prime_UTR 30.0%
CAAACCATAGTAGTTAATAG+CGG + chr7_3:51862347-51862366 None:intergenic 30.0%
TACTATGGTTTGAACACATT+AGG - chr7_3:51862355-51862374 Msa1108690:three_prime_UTR 30.0%
CACATTAGGATTATTTGTAG+TGG - chr7_3:51862369-51862388 Msa1108690:three_prime_UTR 30.0%
GTGATGTAATTTGATGTGTT+AGG - chr7_3:51862433-51862452 Msa1108690:exon 30.0%
CCATACAACATCAACTTATA+AGG + chr7_3:51862704-51862723 None:intergenic 30.0%
!! CCTTATAAGTTGATGTTGTA+TGG - chr7_3:51862701-51862720 Msa1108690:CDS 30.0%
! TCTGATATCGTCTTAGATTT+TGG + chr7_3:51862738-51862757 None:intergenic 30.0%
TATTACAGATAGTCCAATAG+CGG + chr7_3:51862772-51862791 None:intergenic 30.0%
ATCTGTAATATCCACATACT+AGG - chr7_3:51862782-51862801 Msa1108690:CDS 30.0%
! AAAATTATTGGCCTAGTATG+TGG + chr7_3:51862796-51862815 None:intergenic 30.0%
! ACATACTAGGCCAATAATTT+TGG - chr7_3:51862795-51862814 Msa1108690:CDS 30.0%
!! TCTGGTTTCTAAGTAGTTTT+TGG - chr7_3:51862889-51862908 Msa1108690:intron 30.0%
! AATTGGTTTCTATGACTAGT+TGG - chr7_3:51862998-51863017 Msa1108690:intron 30.0%
! ATGCTGAAAAAATGGTGTTA+TGG + chr7_3:51863067-51863086 None:intergenic 30.0%
AGTATACAGTGAAAACAACA+GGG + chr7_3:51863164-51863183 None:intergenic 30.0%
TTAATACTGGAAATGGTTCA+AGG - chr7_3:51863351-51863370 Msa1108690:intron 30.0%
AAAATGAAACCAACAAAGCA+AGG - chr7_3:51863381-51863400 Msa1108690:intron 30.0%
!! CTGGAAAGTATCTTCAATTA+AGG + chr7_3:51863480-51863499 None:intergenic 30.0%
ATGAAAAGGGATTTATGCAT+CGG + chr7_3:51863705-51863724 None:intergenic 30.0%
AATCCTGTAAGCAATGAAAA+GGG + chr7_3:51863718-51863737 None:intergenic 30.0%
AAATCCTGTAAGCAATGAAA+AGG + chr7_3:51863719-51863738 None:intergenic 30.0%
TATTACCCACAAGACAATTA+TGG + chr7_3:51863752-51863771 None:intergenic 30.0%
TGGGTAATATTCAAATTTCC+AGG - chr7_3:51863763-51863782 Msa1108690:intron 30.0%
GAGAAATTCTCAGAAATTGT+TGG - chr7_3:51863787-51863806 Msa1108690:intron 30.0%
TGTTGGAAGTCCATATTATA+TGG - chr7_3:51863804-51863823 Msa1108690:intron 30.0%
ATGGACCTGAAATAGATATA+TGG - chr7_3:51863851-51863870 Msa1108690:intron 30.0%
AATTATTACCAGCCCAAAAT+GGG + chr7_3:51863918-51863937 None:intergenic 30.0%
TAATTATTACCAGCCCAAAA+TGG + chr7_3:51863919-51863938 None:intergenic 30.0%
! AACTTTTCAGATAAACTACG+TGG + chr7_3:51864254-51864273 None:intergenic 30.0%
TTAGCACTTTCAGAAATACT+GGG + chr7_3:51864514-51864533 None:intergenic 30.0%
TTTAGCACTTTCAGAAATAC+TGG + chr7_3:51864515-51864534 None:intergenic 30.0%
!! AAGTCTTGTTAAGCAAATGT+TGG - chr7_3:51864534-51864553 Msa1108690:intron 30.0%
CTGAAATTATTTAGTGATGC+TGG - chr7_3:51864664-51864683 Msa1108690:CDS 30.0%
TAAGGACTTATCAGAAGAAA+TGG - chr7_3:51864974-51864993 Msa1108690:intron 30.0%
ATTCAAAAGAAAAGCCCTTA+GGG - chr7_3:51865128-51865147 Msa1108690:intron 30.0%
! AAGATGGATACTGATAATGA+TGG - chr7_3:51865288-51865307 Msa1108690:intron 30.0%
TCCATTGAAGAACTAAAAGT+TGG - chr7_3:51865318-51865337 Msa1108690:intron 30.0%
!!! TCCAACTTTTAGTTCTTCAA+TGG + chr7_3:51865322-51865341 None:intergenic 30.0%
CACAATAAGCTAGAAGAAAA+AGG + chr7_3:51865421-51865440 None:intergenic 30.0%
TAAACTTACCACTTGTAACT+GGG - chr7_3:51865443-51865462 Msa1108690:intron 30.0%
!!! TTCTAATACGAAGGCATTTT+CGG - chr7_3:51865483-51865502 Msa1108690:intron 30.0%
ATGAAAACAGATCATAGGAA+AGG + chr7_3:51865533-51865552 None:intergenic 30.0%
! TTTTCAAACCATTGTGTGAA+TGG - chr7_3:51865558-51865577 Msa1108690:intron 30.0%
ACTTAAGAACAATTTACGGT+TGG + chr7_3:51865602-51865621 None:intergenic 30.0%
TGACATCAGGTAGATAATAA+TGG - chr7_3:51865652-51865671 Msa1108690:intron 30.0%
TCAGGTAGATAATAATGGTA+AGG - chr7_3:51865657-51865676 Msa1108690:intron 30.0%
CAGGTAGATAATAATGGTAA+GGG - chr7_3:51865658-51865677 Msa1108690:intron 30.0%
! CCTTTTTAAATGAAGGGAAA+TGG + chr7_3:51865710-51865729 None:intergenic 30.0%
CCATTTCCCTTCATTTAAAA+AGG - chr7_3:51865707-51865726 Msa1108690:intron 30.0%
TTCCCTTCATTTAAAAAGGA+TGG - chr7_3:51865711-51865730 Msa1108690:intron 30.0%
! TGCCATCCTTTTTAAATGAA+GGG + chr7_3:51865716-51865735 None:intergenic 30.0%
! TTGCCATCCTTTTTAAATGA+AGG + chr7_3:51865717-51865736 None:intergenic 30.0%
TTTACATGTAGTCATGGTTA+AGG - chr7_3:51865913-51865932 Msa1108690:intron 30.0%
AATCAGCTATGATGAATTTG+TGG - chr7_3:51865978-51865997 Msa1108690:intron 30.0%
GCTTCTTTGTGATGATTATT+TGG - chr7_3:51866191-51866210 Msa1108690:intron 30.0%
!! AACAAAGGGTGTGTATATTT+TGG + chr7_3:51866278-51866297 None:intergenic 30.0%
TGTTTCACACAAGTAACAAA+GGG + chr7_3:51866292-51866311 None:intergenic 30.0%
! TTTGTTACTTGTGTGAAACA+CGG - chr7_3:51866292-51866311 Msa1108690:intron 30.0%
TTGTATTCTGTACTCAGATT+TGG - chr7_3:51866451-51866470 Msa1108690:intron 30.0%
ATGTACTTGTTCTTGAACTA+TGG - chr7_3:51866582-51866601 Msa1108690:CDS 30.0%
TTGGCAATTTAATCACTGGA+AGG - chr7_3:51861986-51862005 Msa1108690:three_prime_UTR 35.0%
! TATCCCGCTATAGCATTTTT+GGG - chr7_3:51862299-51862318 Msa1108690:three_prime_UTR 35.0%
!! TAGTAGTTAATAGCGGATAG+CGG + chr7_3:51862340-51862359 None:intergenic 35.0%
CTATCCGCTATTAACTACTA+TGG - chr7_3:51862340-51862359 Msa1108690:three_prime_UTR 35.0%
GTATGGTATCTTCGTTTCAT+AGG - chr7_3:51862562-51862581 Msa1108690:CDS 35.0%
TACCATTAGCAATGTGGAAA+CGG + chr7_3:51862643-51862662 None:intergenic 35.0%
GGAATTTACCATTAGCAATG+TGG + chr7_3:51862649-51862668 None:intergenic 35.0%
TGATGTTGTATGGTTGAGTT+AGG - chr7_3:51862711-51862730 Msa1108690:CDS 35.0%
CCTCTTCATGCCAAAATTAT+TGG + chr7_3:51862808-51862827 None:intergenic 35.0%
!! CCAATAATTTTGGCATGAAG+AGG - chr7_3:51862805-51862824 Msa1108690:CDS 35.0%
TGAAGAGGTTTATCAGAGAA+TGG - chr7_3:51862820-51862839 Msa1108690:CDS 35.0%
GCCTCAAGATGAACATTATT+GGG + chr7_3:51862860-51862879 None:intergenic 35.0%
AGCCTCAAGATGAACATTAT+TGG + chr7_3:51862861-51862880 None:intergenic 35.0%
GTATACAGTGAAAACAACAG+GGG + chr7_3:51863163-51863182 None:intergenic 35.0%
GAGTATACAGTGAAAACAAC+AGG + chr7_3:51863165-51863184 None:intergenic 35.0%
!! GTTGTTTTCACTGTATACTC+CGG - chr7_3:51863165-51863184 Msa1108690:CDS 35.0%
ACCAAAATAATCGGCCTATT+GGG + chr7_3:51863271-51863290 None:intergenic 35.0%
TACCAAAATAATCGGCCTAT+TGG + chr7_3:51863272-51863291 None:intergenic 35.0%
AAAAAGCTTCCTTGCTTTGT+TGG + chr7_3:51863393-51863412 None:intergenic 35.0%
GAAAACAAGCTTGCATTAGA+GGG + chr7_3:51863553-51863572 None:intergenic 35.0%
AGAAAACAAGCTTGCATTAG+AGG + chr7_3:51863554-51863573 None:intergenic 35.0%
! AATCCCTTTTCATTGCTTAC+AGG - chr7_3:51863712-51863731 Msa1108690:intron 35.0%
! ATTTCTGAGAATTTCTCACC+TGG + chr7_3:51863784-51863803 None:intergenic 35.0%
GCACTCCATATATCTATTTC+AGG + chr7_3:51863859-51863878 None:intergenic 35.0%
GAAATAGATATATGGAGTGC+AGG - chr7_3:51863859-51863878 Msa1108690:intron 35.0%
ATTATTACCAGCCCAAAATG+GGG + chr7_3:51863917-51863936 None:intergenic 35.0%
ATGCACATGTACATGTAGAT+GGG + chr7_3:51863986-51864005 None:intergenic 35.0%
TATGCACATGTACATGTAGA+TGG + chr7_3:51863987-51864006 None:intergenic 35.0%
TGTAATTACCAGCCCAAAAT+GGG + chr7_3:51864074-51864093 None:intergenic 35.0%
ATGTAATTACCAGCCCAAAA+TGG + chr7_3:51864075-51864094 None:intergenic 35.0%
TTCAGACTCACTCAAACTAA+AGG + chr7_3:51864212-51864231 None:intergenic 35.0%
!! TTGTCTCGTGTTTTTGAACT+TGG - chr7_3:51864302-51864321 Msa1108690:intron 35.0%
CATCAAGGTAATATGATAGC+AGG + chr7_3:51864411-51864430 None:intergenic 35.0%
CTGCATTAGGATTAACATCA+AGG + chr7_3:51864426-51864445 None:intergenic 35.0%
GAGGGCTTATAGATTTCAAA+CGG - chr7_3:51864479-51864498 Msa1108690:intron 35.0%
AGGGCTTATAGATTTCAAAC+GGG - chr7_3:51864480-51864499 Msa1108690:intron 35.0%
AAATAGGGAAACAACACTGA+TGG - chr7_3:51864876-51864895 Msa1108690:intron 35.0%
CAGTTATGGTGCTTATGTTA+AGG - chr7_3:51864956-51864975 Msa1108690:intron 35.0%
GATTCAAAAGAAAAGCCCTT+AGG - chr7_3:51865127-51865146 Msa1108690:intron 35.0%
AAGATTGTACCGTTGAAAAC+AGG - chr7_3:51865209-51865228 Msa1108690:intron 35.0%
GATGTCTTCAACTTCTTCAT+TGG + chr7_3:51865253-51865272 None:intergenic 35.0%
CAAAGAGATGTTCAAGAAGA+TGG - chr7_3:51865272-51865291 Msa1108690:intron 35.0%
GTTTATTGAAGCTGTGAGTA+TGG - chr7_3:51865386-51865405 Msa1108690:intron 35.0%
CTAAACTTACCACTTGTAAC+TGG - chr7_3:51865442-51865461 Msa1108690:intron 35.0%
GTCGAATCATTCTAATACGA+AGG - chr7_3:51865474-51865493 Msa1108690:intron 35.0%
TTTCAGTACCATTCACACAA+TGG + chr7_3:51865569-51865588 None:intergenic 35.0%
! GATCATTGTTTGTTGACATC+AGG - chr7_3:51865639-51865658 Msa1108690:intron 35.0%
!!! TTCTCCTATTTTGACAAGGA+CGG - chr7_3:51865760-51865779 Msa1108690:intron 35.0%
ATATTGAACCAGAAGAGCTA+CGG - chr7_3:51865791-51865810 Msa1108690:intron 35.0%
ATTCTTGAACAACTACAGGA+TGG - chr7_3:51865952-51865971 Msa1108690:intron 35.0%
TTTGTGGCTATGATGAAAAC+TGG - chr7_3:51865994-51866013 Msa1108690:intron 35.0%
! TATTTGGTTCCTCGTTAGAT+AGG - chr7_3:51866207-51866226 Msa1108690:intron 35.0%
! ATTTGGTTCCTCGTTAGATA+GGG - chr7_3:51866208-51866227 Msa1108690:intron 35.0%
GTGTTTCACACAAGTAACAA+AGG + chr7_3:51866293-51866312 None:intergenic 35.0%
AATCATACATGTCACACCAT+TGG + chr7_3:51866328-51866347 None:intergenic 35.0%
AGGCTGGATGTTAAAATGAT+TGG + chr7_3:51866351-51866370 None:intergenic 35.0%
ACTACAAGATATTCACACCT+CGG + chr7_3:51866431-51866450 None:intergenic 35.0%
GGCCAAAATATTAGTAGAGT+AGG + chr7_3:51866492-51866511 None:intergenic 35.0%
!!! CTAATATTTTGGCCAGAGAA+TGG - chr7_3:51866498-51866517 Msa1108690:CDS 35.0%
CAAGAACAAGTACATCTTAC+AGG + chr7_3:51866577-51866596 None:intergenic 35.0%
GTTTGATTGAACACCAGAAG+CGG + chr7_3:51861904-51861923 None:intergenic 40.0%
CATGTGCTCAAAGACATAAG+TGG - chr7_3:51861940-51861959 Msa1108690:three_prime_UTR 40.0%
TTGATTGAACACCAGAAGCT+GGG + chr7_3:51862014-51862033 None:intergenic 40.0%
ATTGATTGAACACCAGAAGC+TGG + chr7_3:51862015-51862034 None:intergenic 40.0%
TTGGGATCTGTCTCAATTTC+TGG + chr7_3:51862059-51862078 None:intergenic 40.0%
TGCAAACCTCTCAGCAATTT+GGG + chr7_3:51862077-51862096 None:intergenic 40.0%
ATGCAAACCTCTCAGCAATT+TGG + chr7_3:51862078-51862097 None:intergenic 40.0%
ATGTAATGAAGTGGCAGACT+TGG - chr7_3:51862121-51862140 Msa1108690:three_prime_UTR 40.0%
! AGACTTGGTTACAACTCAGT+TGG - chr7_3:51862136-51862155 Msa1108690:three_prime_UTR 40.0%
! GACTTGGTTACAACTCAGTT+GGG - chr7_3:51862137-51862156 Msa1108690:three_prime_UTR 40.0%
! CTATCCCGCTATAGCATTTT+TGG - chr7_3:51862298-51862317 Msa1108690:three_prime_UTR 40.0%
! ATCCCGCTATAGCATTTTTG+GGG - chr7_3:51862300-51862319 Msa1108690:three_prime_UTR 40.0%
! TTGTAGTGGGATTGTGTTTG+TGG - chr7_3:51862383-51862402 Msa1108690:three_prime_UTR 40.0%
ACCATTAGCAATGTGGAAAC+GGG + chr7_3:51862642-51862661 None:intergenic 40.0%
CAACATCAACTTATAAGGGG+AGG + chr7_3:51862699-51862718 None:intergenic 40.0%
GCCCAATAATGTTCATCTTG+AGG - chr7_3:51862856-51862875 Msa1108690:CDS 40.0%
TCTTGAGGCTCGAAAATTTC+TGG - chr7_3:51862871-51862890 Msa1108690:CDS 40.0%
!! GTGAAAACAACAGGGGTATT+GGG + chr7_3:51863156-51863175 None:intergenic 40.0%
! AGTGAAAACAACAGGGGTAT+TGG + chr7_3:51863157-51863176 None:intergenic 40.0%
! ACCCAATAGGCCGATTATTT+TGG - chr7_3:51863267-51863286 Msa1108690:CDS 40.0%
AGCGCTACATACGTTAAGTT+AGG - chr7_3:51863602-51863621 Msa1108690:intron 40.0%
TCCATATTATATGGCTCCAG+AGG - chr7_3:51863813-51863832 Msa1108690:intron 40.0%
!! ACCTCTGGAGCCATATAATA+TGG + chr7_3:51863817-51863836 None:intergenic 40.0%
TTATTACCAGCCCAAAATGG+GGG + chr7_3:51863916-51863935 None:intergenic 40.0%
TGCACATGTACATGTAGATG+GGG + chr7_3:51863985-51864004 None:intergenic 40.0%
! CTTGTTATCCCACTAAATGG+GGG + chr7_3:51864032-51864051 None:intergenic 40.0%
! CCTTGTTATCCCACTAAATG+GGG + chr7_3:51864033-51864052 None:intergenic 40.0%
! GCCTTGTTATCCCACTAAAT+GGG + chr7_3:51864034-51864053 None:intergenic 40.0%
!! AGCCTTGTTATCCCACTAAA+TGG + chr7_3:51864035-51864054 None:intergenic 40.0%
TTTAGTGGGATAACAAGGCT+TGG - chr7_3:51864035-51864054 Msa1108690:CDS 40.0%
!!! TGGTTGTTGTTTCCCCATTT+TGG - chr7_3:51864058-51864077 Msa1108690:CDS 40.0%
!!! GGTTGTTGTTTCCCCATTTT+GGG - chr7_3:51864059-51864078 Msa1108690:CDS 40.0%
GTAATTACCAGCCCAAAATG+GGG + chr7_3:51864073-51864092 None:intergenic 40.0%
TTGCACAAGCTATTCTTCGA+GGG - chr7_3:51864461-51864480 Msa1108690:intron 40.0%
TAGATTTCAAACGGGAACCT+TGG - chr7_3:51864488-51864507 Msa1108690:intron 40.0%
AGACCCTAAGCTTCGATTAA+CGG - chr7_3:51864561-51864580 Msa1108690:intron 40.0%
GAACATACCAAGCACTTGTT+TGG + chr7_3:51864587-51864606 None:intergenic 40.0%
GGTATGTTCATGACTTTCCA+TGG - chr7_3:51864598-51864617 Msa1108690:intron 40.0%
TCTCAAAACCATCTCCTTTC+TGG - chr7_3:51864722-51864741 Msa1108690:CDS 40.0%
CTCAAAACCATCTCCTTTCT+GGG - chr7_3:51864723-51864742 Msa1108690:CDS 40.0%
ATTAAGACCCAGAAAGGAGA+TGG + chr7_3:51864733-51864752 None:intergenic 40.0%
GAAACAACACTGATGGTTGA+AGG - chr7_3:51864883-51864902 Msa1108690:intron 40.0%
ACATCACCAAGAGGAACATT+TGG + chr7_3:51865069-51865088 None:intergenic 40.0%
!! TTGGTGATGTTGTCAAGTCA+AGG - chr7_3:51865079-51865098 Msa1108690:intron 40.0%
AAAAGAAAAGCCCTTAGGGT+TGG - chr7_3:51865132-51865151 Msa1108690:intron 40.0%
ATGCAATGAACCAACCCTAA+GGG + chr7_3:51865145-51865164 None:intergenic 40.0%
TATGCAATGAACCAACCCTA+AGG + chr7_3:51865146-51865165 None:intergenic 40.0%
! CAGCAATGACCTGTTTTCAA+CGG + chr7_3:51865221-51865240 None:intergenic 40.0%
! CAAGTTGAGACTGATGGTTT+CGG + chr7_3:51865347-51865366 None:intergenic 40.0%
GGTAAGGGAACACTAGATTA+CGG - chr7_3:51865673-51865692 Msa1108690:intron 40.0%
AAATGACGAGCATCTTCACA+AGG - chr7_3:51865735-51865754 Msa1108690:intron 40.0%
GTCCTTGTCAAAATAGGAGA+AGG + chr7_3:51865761-51865780 None:intergenic 40.0%
!!! TCTCCTATTTTGACAAGGAC+GGG - chr7_3:51865761-51865780 Msa1108690:intron 40.0%
ATTCCCGTCCTTGTCAAAAT+AGG + chr7_3:51865767-51865786 None:intergenic 40.0%
!!! TATTTTGACAAGGACGGGAA+TGG - chr7_3:51865766-51865785 Msa1108690:intron 40.0%
ATCAGTTCCATCTTCCATCA+AGG + chr7_3:51865821-51865840 None:intergenic 40.0%
GGCTATGATGAAAACTGGAA+CGG - chr7_3:51865999-51866018 Msa1108690:intron 40.0%
TGATGAAAACTGGAACGGAT+TGG - chr7_3:51866004-51866023 Msa1108690:intron 40.0%
AGGAGGACTATTACACTATG+TGG + chr7_3:51866157-51866176 None:intergenic 40.0%
GTAATAGTCCTCCTAAATCC+TGG - chr7_3:51866163-51866182 Msa1108690:intron 40.0%
TCAGACAACAACAGGTGAAA+AGG + chr7_3:51866235-51866254 None:intergenic 40.0%
GCTCAAAGACATAAGTGGAC+CGG - chr7_3:51861945-51861964 Msa1108690:three_prime_UTR 45.0%
ACAGATCCCAAATTGCTGAG+AGG - chr7_3:51862068-51862087 Msa1108690:three_prime_UTR 45.0%
GACCCCAAAAATGCTATAGC+GGG + chr7_3:51862305-51862324 None:intergenic 45.0%
CGACCCCAAAAATGCTATAG+CGG + chr7_3:51862306-51862325 None:intergenic 45.0%
!!! CGCTATAGCATTTTTGGGGT+CGG - chr7_3:51862304-51862323 Msa1108690:three_prime_UTR 45.0%
CATTAGCAATGTGGAAACGG+GGG + chr7_3:51862640-51862659 None:intergenic 45.0%
CCATTAGCAATGTGGAAACG+GGG + chr7_3:51862641-51862660 None:intergenic 45.0%
GAGTCTCATTGATCCGCTAT+TGG - chr7_3:51862756-51862775 Msa1108690:CDS 45.0%
GGTTTATCAGAGAATGGCCA+AGG - chr7_3:51862826-51862845 Msa1108690:CDS 45.0%
!! AGCTTGCATTAGAGGGTGTT+TGG + chr7_3:51863546-51863565 None:intergenic 45.0%
GCACATGTACATGTAGATGG+GGG + chr7_3:51863984-51864003 None:intergenic 45.0%
GCATACTCTATCCATTCCTG+TGG - chr7_3:51864002-51864021 Msa1108690:CDS 45.0%
CCCCATTTAGTGGGATAACA+AGG - chr7_3:51864030-51864049 Msa1108690:CDS 45.0%
AGATGCTCATGCACATGTAG+TGG + chr7_3:51864143-51864162 None:intergenic 45.0%
CCTTGCTCAGATTCTGCATT+AGG + chr7_3:51864439-51864458 None:intergenic 45.0%
CCTAATGCAGAATCTGAGCA+AGG - chr7_3:51864436-51864455 Msa1108690:intron 45.0%
GTTGCACAAGCTATTCTTCG+AGG - chr7_3:51864460-51864479 Msa1108690:intron 45.0%
CTTTCAGAAATACTGGGCCA+AGG + chr7_3:51864508-51864527 None:intergenic 45.0%
GTTAATCGAAGCTTAGGGTC+TGG + chr7_3:51864562-51864581 None:intergenic 45.0%
TGGCCGTTAATCGAAGCTTA+GGG + chr7_3:51864567-51864586 None:intergenic 45.0%
TTGGCCGTTAATCGAAGCTT+AGG + chr7_3:51864568-51864587 None:intergenic 45.0%
TTAACGGCCAAACAAGTGCT+TGG - chr7_3:51864577-51864596 Msa1108690:intron 45.0%
ACACTGATGGTTGAAGGAGA+TGG - chr7_3:51864889-51864908 Msa1108690:intron 45.0%
CACTGATGGTTGAAGGAGAT+GGG - chr7_3:51864890-51864909 Msa1108690:intron 45.0%
!! TTCTTAGCATTCTGGAGCCA+AGG + chr7_3:51865042-51865061 None:intergenic 45.0%
TTGGCTCCAGAATGCTAAGA+AGG - chr7_3:51865041-51865060 Msa1108690:intron 45.0%
TTGGAGCCTTCTTAGCATTC+TGG + chr7_3:51865050-51865069 None:intergenic 45.0%
AAGGCTCCAAATGTTCCTCT+TGG - chr7_3:51865060-51865079 Msa1108690:intron 45.0%
GACTTGACAACATCACCAAG+AGG + chr7_3:51865078-51865097 None:intergenic 45.0%
! ACTCAGCAAGTTGAGACTGA+TGG + chr7_3:51865353-51865372 None:intergenic 45.0%
AGAACAAGCCCAGTTACAAG+TGG + chr7_3:51865454-51865473 None:intergenic 45.0%
!!! GGCCTTCTCCTATTTTGACA+AGG - chr7_3:51865756-51865775 Msa1108690:intron 45.0%
CCTTGTCTGTGTCTACTTCT+TGG + chr7_3:51865873-51865892 None:intergenic 45.0%
CCAAGAAGTAGACACAGACA+AGG - chr7_3:51865870-51865889 Msa1108690:intron 45.0%
!! AACTGGAACGGATTGGAGAA+AGG - chr7_3:51866011-51866030 Msa1108690:intron 45.0%
CTTCTCGACATTACTCACGT+GGG - chr7_3:51866034-51866053 Msa1108690:intron 45.0%
AGAAGCCAAGTCCAGGATTT+AGG + chr7_3:51866177-51866196 None:intergenic 45.0%
ATCACAAAGAAGCCAAGTCC+AGG + chr7_3:51866184-51866203 None:intergenic 45.0%
GAAAAGGACCCTATCTAACG+AGG + chr7_3:51866219-51866238 None:intergenic 45.0%
TTCGTGACTCAGACAACAAC+AGG + chr7_3:51866243-51866262 None:intergenic 45.0%
TGTTGTTGTCTGAGTCACGA+AGG - chr7_3:51866242-51866261 Msa1108690:intron 45.0%
TTGTCTGAGTCACGAAGGAA+GGG - chr7_3:51866247-51866266 Msa1108690:intron 45.0%
TAACATCCAGCCTTCTCTTC+TGG - chr7_3:51866358-51866377 Msa1108690:intron 45.0%
CATTGCCAAACCAGAAGAGA+AGG + chr7_3:51866371-51866390 None:intergenic 45.0%
GCAGTCTGATTGTTTATCCG+AGG - chr7_3:51866411-51866430 Msa1108690:intron 45.0%
TGGAATACACAGCCATTCTC+TGG + chr7_3:51866513-51866532 None:intergenic 45.0%
!!! TGATTTTTTAATTTAAAAAA+TGG - chr7_3:51863025-51863044 Msa1108690:intron 5.0%
!! AAATAATTAAAATAGTAATT+GGG + chr7_3:51863245-51863264 None:intergenic 5.0%
!! TTCTTTAATTAAATTTAAAT+AGG - chr7_3:51864860-51864879 Msa1108690:intron 5.0%
!! TCTTTAATTAAATTTAAATA+GGG - chr7_3:51864861-51864880 Msa1108690:intron 5.0%
GAAATAGCGGTCATAGCGCT+AGG - chr7_3:51862273-51862292 Msa1108690:three_prime_UTR 50.0%
CCCCGTTTCCACATTGCTAA+TGG - chr7_3:51862638-51862657 Msa1108690:intron 50.0%
ATTATTGGGCCTGACTGCCT+TGG + chr7_3:51862846-51862865 None:intergenic 50.0%
ACTAAATGGGGGAACACCAC+AGG + chr7_3:51864021-51864040 None:intergenic 50.0%
TGTGGTGTTCCCCCATTTAG+TGG - chr7_3:51864020-51864039 Msa1108690:CDS 50.0%
GTGGTGTTCCCCCATTTAGT+GGG - chr7_3:51864021-51864040 Msa1108690:CDS 50.0%
AGTGGGATAACAAGGCTTGG+TGG - chr7_3:51864038-51864057 Msa1108690:CDS 50.0%
!! GTTGTTTCCCCATTTTGGGC+TGG - chr7_3:51864063-51864082 Msa1108690:CDS 50.0%
! GCTCATGCACATGTAGTGGA+GGG + chr7_3:51864139-51864158 None:intergenic 50.0%
TGCTCATGCACATGTAGTGG+AGG + chr7_3:51864140-51864159 None:intergenic 50.0%
GAAGGAGATGGGTCTATGTG+TGG - chr7_3:51864901-51864920 Msa1108690:intron 50.0%
! CTTGTCTTGCAGAGCATCCT+TGG - chr7_3:51865022-51865041 Msa1108690:intron 50.0%
! AAGGCATTCCGTAGCTCTTC+TGG + chr7_3:51865802-51865821 None:intergenic 50.0%
AGAGCTACGGAATGCCTTGA+TGG - chr7_3:51865804-51865823 Msa1108690:intron 50.0%
CGGAATGCCTTGATGGAAGA+TGG - chr7_3:51865811-51865830 Msa1108690:intron 50.0%
GCTTCTCGACATTACTCACG+TGG - chr7_3:51866033-51866052 Msa1108690:intron 50.0%
GTCCTCCTAAATCCTGGACT+TGG - chr7_3:51866169-51866188 Msa1108690:intron 50.0%
AGCCAAGTCCAGGATTTAGG+AGG + chr7_3:51866174-51866193 None:intergenic 50.0%
GTTGTCTGAGTCACGAAGGA+AGG - chr7_3:51866246-51866265 Msa1108690:intron 50.0%
TGTCTGAGTCACGAAGGAAG+GGG - chr7_3:51866248-51866267 Msa1108690:intron 50.0%
TTGTGTGAAACACGGTGCCT+TGG - chr7_3:51866300-51866319 Msa1108690:intron 50.0%
!! ATGTCACACCATTGGCTCCA+AGG + chr7_3:51866320-51866339 None:intergenic 50.0%
! TCCAGCCTTCTCTTCTGGTT+TGG - chr7_3:51866363-51866382 Msa1108690:intron 50.0%
ACTGGAAGGATCCCAGCTTC+TGG - chr7_3:51862000-51862019 Msa1108690:three_prime_UTR 55.0%
AGAGAATGGCCAAGGCAGTC+AGG - chr7_3:51862834-51862853 Msa1108690:CDS 55.0%
TAGTTCCGCTTGAGCACCTC+TGG + chr7_3:51863832-51863851 None:intergenic 55.0%
! GAGGTGCTCAAGCGGAACTA+TGG - chr7_3:51863832-51863851 Msa1108690:intron 55.0%
! TGTGCGGTGTTCCCCCATTT+TGG - chr7_3:51863902-51863921 Msa1108690:intron 55.0%
! GTGCGGTGTTCCCCCATTTT+GGG - chr7_3:51863903-51863922 Msa1108690:intron 55.0%
ATGGGGGAACACCACAGGAA+TGG + chr7_3:51864016-51864035 None:intergenic 55.0%
GCCAAACCAGAAGAGAAGGC+TGG + chr7_3:51866367-51866386 None:intergenic 55.0%
!! TGGCTCCAGAGGTGCTCAAG+CGG - chr7_3:51863824-51863843 Msa1108690:intron 60.0%
! GGTGTTCCCCCATTTTGGGC+TGG - chr7_3:51863907-51863926 Msa1108690:intron 60.0%
ACACGGTGCCTTGGAGCCAA+TGG - chr7_3:51866309-51866328 Msa1108690:intron 60.0%
! TAGCGGATAGCGGCGCGTAG+CGG + chr7_3:51862330-51862349 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 51861891 51866665 51861891 ID=Msa1108690;Name=Msa1108690
chr7_3 mRNA 51861891 51866665 51861891 ID=Msa1108690-mRNA-1;Parent=Msa1108690;Name=Msa1108690-mRNA-1;_AED=0.26;_eAED=0.35;_QI=0|0.71|0.75|1|0.85|0.75|8|520|389
chr7_3 exon 51861891 51862216 51861891 ID=Msa1108690-mRNA-1:exon:10718;Parent=Msa1108690-mRNA-1
chr7_3 exon 51862243 51862586 51862243 ID=Msa1108690-mRNA-1:exon:10717;Parent=Msa1108690-mRNA-1
chr7_3 exon 51862665 51862895 51862665 ID=Msa1108690-mRNA-1:exon:10716;Parent=Msa1108690-mRNA-1
chr7_3 exon 51863149 51863325 51863149 ID=Msa1108690-mRNA-1:exon:10715;Parent=Msa1108690-mRNA-1
chr7_3 exon 51863407 51863522 51863407 ID=Msa1108690-mRNA-1:exon:10714;Parent=Msa1108690-mRNA-1
chr7_3 exon 51863958 51864110 51863958 ID=Msa1108690-mRNA-1:exon:10713;Parent=Msa1108690-mRNA-1
chr7_3 exon 51864628 51864771 51864628 ID=Msa1108690-mRNA-1:exon:10712;Parent=Msa1108690-mRNA-1
chr7_3 exon 51866467 51866665 51866467 ID=Msa1108690-mRNA-1:exon:10711;Parent=Msa1108690-mRNA-1
chr7_3 CDS 51866467 51866665 51866467 ID=Msa1108690-mRNA-1:cds;Parent=Msa1108690-mRNA-1
chr7_3 CDS 51864628 51864771 51864628 ID=Msa1108690-mRNA-1:cds;Parent=Msa1108690-mRNA-1
chr7_3 CDS 51863958 51864110 51863958 ID=Msa1108690-mRNA-1:cds;Parent=Msa1108690-mRNA-1
chr7_3 CDS 51863407 51863522 51863407 ID=Msa1108690-mRNA-1:cds;Parent=Msa1108690-mRNA-1
chr7_3 CDS 51863149 51863325 51863149 ID=Msa1108690-mRNA-1:cds;Parent=Msa1108690-mRNA-1
chr7_3 CDS 51862665 51862895 51862665 ID=Msa1108690-mRNA-1:cds;Parent=Msa1108690-mRNA-1
chr7_3 CDS 51862437 51862586 51862437 ID=Msa1108690-mRNA-1:cds;Parent=Msa1108690-mRNA-1
chr7_3 three_prime_UTR 51862243 51862436 51862243 ID=Msa1108690-mRNA-1:three_prime_utr;Parent=Msa1108690-mRNA-1
chr7_3 three_prime_UTR 51861891 51862216 51861891 ID=Msa1108690-mRNA-1:three_prime_utr;Parent=Msa1108690-mRNA-1
Gene Sequence

>Msa1108690

ATGGCAGCTTCCGCTTCTGGTGTTCAATCAAACTCTGTGTCTGTTGACTCATGTGCTCAAAGACATAAGTGGACCGGTGATAATCTTGACATTGTTTGGCAATTTAATCACTGGAAGGATCCCAGCTTCTGGTGTTCAATCAATCCTAAATACTTTTATAGCAAACCAGAAATTGAGACAGATCCCAAATTGCTGAGAGGTGAGAAATTCTCAGAAATTGTTGGAAGTCCATATTATATGGCTCCAGAGGTGCTCAAGCGGAACTATGGACCTGAAATAGATATATGGAGTGCAGGAGTGATACTCTATATCTTATTGTGCGGTGTTCCCCCATTTTGGGCTGAATCTGAGCAAGGAGTTGCACAAGCTATTCTTCGAGGGCTTATAGATTTCAAACGGGAACCTTGGCCCAGTATTTCTGAAAGTGCTAAAAGTCTTGTTAAGCAAATGTTGGAACCAGACCCTAAGCTTCGATTAACGGCCAAACAAGTGCTTGAGCATCCTTGGCTCCAGAATGCTAAGAAGGCTCCAAATGTTCCTCTTGGTGATGTTGTCAAGTCAAGGCTTAAGCAATTCTCAATGATGAATAGATTCAAAAGAAAAGCCCTTAGGGTCATTGCTGATTTCTTATCCAATGAAGAAGTTGAAGACATCAAAGAGATGTTCAAGAAGATGGATACTGATAATGATGGTATTGTTTCCATTGAAGAACTAAAAGTTGGATTCCGAAACCATCAGTCTCAACTTGCTGAGTCTGAAGTTCAGATGTTTATTGAAGCTGTGAGTATGGTAGATAATAATGGTAAGGGAACACTAGATTACGGAGAATTTGTTGCCATTTCCCTTCATTTAAAAAGGATGGCAAATGACGAGCATCTTCACAAGGCCTTCTCCTATTTTGACAAGGACGGGAATGGATATATTGAACCAGAAGAGCTACGGAATGCCTTGATGGAAGATGGAACTGATGACTGTACAGATGTAGCAAATGATATTTTCCAAGAAGTAGACACAGACAAGGATGGAAAAATCAGCTATGATGAATTTGTGGCTATGATGAAAACTGGAACGGATTGGAGAAAGGCTTCTCGACATTACTCACGTGGGAGATTCAATAGCTTGAGCTTAAAGTTAATGAAAGATGGTTCTTTAAACTTAGGAAATGAGTAG
Protein sequence

>Msa1108690

MAASASGVQSNSVSVDSCAQRHKWTGDNLDIVWQFNHWKDPSFWCSINPKYFYSKPEIETDPKLLRGEKFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKREPWPSISESAKSLVKQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIADFLSNEEVEDIKEMFKKMDTDNDGIVSIEELKVGFRNHQSQLAESEVQMFIEAVSMVDNNGKGTLDYGEFVAISLHLKRMANDEHLHKAFSYFDKDGNGYIEPEELRNALMEDGTDDCTDVANDIFQEVDTDKDGKISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLMKDGSLNLGNE*