Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0271770 | AFK46071.1 | 80.000 | 40 | 8 | 0 | 1 | 40 | 1 | 40 | 2.78e-14 | 70.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0271770 | sp|Q03878|GRP1_DAUCA | 72.973 | 37 | 10 | 0 | 1 | 37 | 1 | 37 | 1.87e-13 | 63.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0271770 | I3T0M9 | 80.000 | 40 | 8 | 0 | 1 | 40 | 1 | 40 | 1.33e-14 | 70.9 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0271770 | 0.807354 | 5.266787e-50 | -8.615850e-47 |
| Msa0011660 | Msa0271770 | -0.807485 | 4.939641e-50 | -8.615850e-47 |
| Msa0031520 | Msa0271770 | 0.827327 | 1.663038e-54 | -8.615850e-47 |
| Msa0033110 | Msa0271770 | 0.803952 | 2.726466e-49 | -8.615850e-47 |
| Msa0044000 | Msa0271770 | 0.808433 | 3.104544e-50 | -8.615850e-47 |
| Msa0047110 | Msa0271770 | 0.805945 | 1.044936e-49 | -8.615850e-47 |
| Msa0071250 | Msa0271770 | 0.803828 | 2.893901e-49 | -8.615850e-47 |
| Msa0079070 | Msa0271770 | 0.818871 | 1.563160e-52 | -8.615850e-47 |
| Msa0089820 | Msa0271770 | 0.825400 | 4.784988e-54 | -8.615850e-47 |
| Msa0090570 | Msa0271770 | 0.845269 | 4.511954e-59 | -8.615850e-47 |
| Msa0104230 | Msa0271770 | 0.809265 | 2.061335e-50 | -8.615850e-47 |
| Msa0106710 | Msa0271770 | 0.808608 | 2.848569e-50 | -8.615850e-47 |
| Msa0106850 | Msa0271770 | 0.809725 | 1.642011e-50 | -8.615850e-47 |
| Msa0117520 | Msa0271770 | 0.812671 | 3.770829e-51 | -8.615850e-47 |
| Msa0118540 | Msa0271770 | 0.809841 | 1.550344e-50 | -8.615850e-47 |
| Msa0127800 | Msa0271770 | 0.816603 | 5.079587e-52 | -8.615850e-47 |
| Msa0137480 | Msa0271770 | 0.801828 | 7.489626e-49 | -8.615850e-47 |
| Msa0138020 | Msa0271770 | 0.804097 | 2.544397e-49 | -8.615850e-47 |
| Msa0139670 | Msa0271770 | 0.819861 | 9.297759e-53 | -8.615850e-47 |
| Msa0140500 | Msa0271770 | -0.815111 | 1.092903e-51 | -8.615850e-47 |
| Msa0148080 | Msa0271770 | 0.802453 | 5.570972e-49 | -8.615850e-47 |
| Msa0150230 | Msa0271770 | 0.815682 | 8.158740e-52 | -8.615850e-47 |
| Msa0160960 | Msa0271770 | 0.833244 | 5.961297e-56 | -8.615850e-47 |
| Msa0167980 | Msa0271770 | 0.815516 | 8.884084e-52 | -8.615850e-47 |
| Msa0171280 | Msa0271770 | 0.828372 | 9.326396e-55 | -8.615850e-47 |
| Msa0171540 | Msa0271770 | 0.811816 | 5.792671e-51 | -8.615850e-47 |
| Msa0180500 | Msa0271770 | 0.832567 | 8.783561e-56 | -8.615850e-47 |
| Msa0183850 | Msa0271770 | 0.842714 | 2.184805e-58 | -8.615850e-47 |
| Msa0189040 | Msa0271770 | 0.807896 | 4.039614e-50 | -8.615850e-47 |
| Msa0190310 | Msa0271770 | 0.807995 | 3.849877e-50 | -8.615850e-47 |
| Msa0202800 | Msa0271770 | 0.814221 | 1.720500e-51 | -8.615850e-47 |
| Msa0204960 | Msa0271770 | 0.845763 | 3.315807e-59 | -8.615850e-47 |
| Msa0206690 | Msa0271770 | 0.849665 | 2.795303e-60 | -8.615850e-47 |
| Msa0207040 | Msa0271770 | -0.824435 | 8.083814e-54 | -8.615850e-47 |
| Msa0207350 | Msa0271770 | 0.814797 | 1.282909e-51 | -8.615850e-47 |
| Msa0207670 | Msa0271770 | 0.819565 | 1.086728e-52 | -8.615850e-47 |
| Msa0209350 | Msa0271770 | 0.800549 | 1.367910e-48 | -8.615850e-47 |
| Msa0209500 | Msa0271770 | 0.819089 | 1.394923e-52 | -8.615850e-47 |
| Msa0214550 | Msa0271770 | 0.834077 | 3.691840e-56 | -8.615850e-47 |
| Msa0217700 | Msa0271770 | 0.802385 | 5.752623e-49 | -8.615850e-47 |
| Msa0220730 | Msa0271770 | 0.802460 | 5.551839e-49 | -8.615850e-47 |
| Msa0223340 | Msa0271770 | 0.811504 | 6.772605e-51 | -8.615850e-47 |
| Msa0229380 | Msa0271770 | 0.810748 | 9.877312e-51 | -8.615850e-47 |
| Msa0234090 | Msa0271770 | 0.807300 | 5.406635e-50 | -8.615850e-47 |
| Msa0236510 | Msa0271770 | -0.840955 | 6.364604e-58 | -8.615850e-47 |
| Msa0240900 | Msa0271770 | 0.811756 | 5.970481e-51 | -8.615850e-47 |
| Msa0241140 | Msa0271770 | 0.814271 | 1.677657e-51 | -8.615850e-47 |
| Msa0249580 | Msa0271770 | 0.801856 | 7.391349e-49 | -8.615850e-47 |
| Msa0257490 | Msa0271770 | 0.861765 | 8.153437e-64 | -8.615850e-47 |
| Msa0257520 | Msa0271770 | 0.810491 | 1.122708e-50 | -8.615850e-47 |
| Msa0259210 | Msa0271770 | 0.838049 | 3.621116e-57 | -8.615850e-47 |
| Msa0261550 | Msa0271770 | 0.810690 | 1.016748e-50 | -8.615850e-47 |
| Msa0271770 | Msa0275020 | 0.849209 | 3.744640e-60 | -8.615850e-47 |
| Msa0271770 | Msa0278580 | 0.835606 | 1.521743e-56 | -8.615850e-47 |
| Msa0271770 | Msa0281530 | 0.845684 | 3.483802e-59 | -8.615850e-47 |
| Msa0271770 | Msa0288080 | 0.800675 | 1.289398e-48 | -8.615850e-47 |
| Msa0271770 | Msa0296790 | 0.819483 | 1.134399e-52 | -8.615850e-47 |
| Msa0271770 | Msa0296820 | 0.855092 | 7.955771e-62 | -8.615850e-47 |
| Msa0271770 | Msa0305410 | 0.811950 | 5.417744e-51 | -8.615850e-47 |
| Msa0271770 | Msa0308630 | 0.814760 | 1.307379e-51 | -8.615850e-47 |
| Msa0271770 | Msa0315940 | 0.845313 | 4.389421e-59 | -8.615850e-47 |
| Msa0271770 | Msa0317960 | 0.825937 | 3.568676e-54 | -8.615850e-47 |
| Msa0271770 | Msa0317970 | 0.854584 | 1.117069e-61 | -8.615850e-47 |
| Msa0271770 | Msa0320590 | 0.803799 | 2.933391e-49 | -8.615850e-47 |
| Msa0271770 | Msa0322240 | 0.819634 | 1.047550e-52 | -8.615850e-47 |
| Msa0271770 | Msa0326480 | 0.814674 | 1.366102e-51 | -8.615850e-47 |
| Msa0271770 | Msa0336310 | 0.824040 | 1.001003e-53 | -8.615850e-47 |
| Msa0271770 | Msa0336320 | 0.847884 | 8.715729e-60 | -8.615850e-47 |
| Msa0271770 | Msa0343850 | 0.854753 | 9.976237e-62 | -8.615850e-47 |
| Msa0271770 | Msa0347750 | 0.821813 | 3.307511e-53 | -8.615850e-47 |
| Msa0271770 | Msa0357900 | 0.806425 | 8.279783e-50 | -8.615850e-47 |
| Msa0271770 | Msa0363790 | 0.810616 | 1.055090e-50 | -8.615850e-47 |
| Msa0271770 | Msa0367870 | 0.813138 | 2.978406e-51 | -8.615850e-47 |
| Msa0271770 | Msa0369920 | 0.823327 | 1.470578e-53 | -8.615850e-47 |
| Msa0271770 | Msa0376910 | 0.806467 | 8.110595e-50 | -8.615850e-47 |
| Msa0271770 | Msa0381610 | -0.830522 | 2.800696e-55 | -8.615850e-47 |
| Msa0271770 | Msa0382370 | 0.831287 | 1.818567e-55 | -8.615850e-47 |
| Msa0271770 | Msa0385500 | 0.815648 | 8.300650e-52 | -8.615850e-47 |
| Msa0271770 | Msa0389210 | 0.818172 | 2.251922e-52 | -8.615850e-47 |
| Msa0271770 | Msa0389770 | 0.805147 | 1.536307e-49 | -8.615850e-47 |
| Msa0271770 | Msa0390530 | 0.803581 | 3.256089e-49 | -8.615850e-47 |
| Msa0271770 | Msa0393620 | 0.803096 | 4.103207e-49 | -8.615850e-47 |
| Msa0271770 | Msa0394120 | 0.810579 | 1.074836e-50 | -8.615850e-47 |
| Msa0271770 | Msa0394470 | 0.812962 | 3.256535e-51 | -8.615850e-47 |
| Msa0271770 | Msa0403770 | 0.831024 | 2.109501e-55 | -8.615850e-47 |
| Msa0271770 | Msa0413410 | 0.814005 | 1.919980e-51 | -8.615850e-47 |
| Msa0271770 | Msa0417330 | 0.827706 | 1.349189e-54 | -8.615850e-47 |
| Msa0271770 | Msa0432160 | 0.828398 | 9.192671e-55 | -8.615850e-47 |
| Msa0271770 | Msa0450400 | -0.846454 | 2.150013e-59 | -8.615850e-47 |
| Msa0271770 | Msa0453350 | 0.812347 | 4.437425e-51 | -8.615850e-47 |
| Msa0271770 | Msa0457510 | 0.806448 | 8.187558e-50 | -8.615850e-47 |
| Msa0271770 | Msa0460590 | 0.805458 | 1.321832e-49 | -8.615850e-47 |
| Msa0271770 | Msa0466840 | -0.802445 | 5.591918e-49 | -8.615850e-47 |
| Msa0271770 | Msa0467100 | 0.806989 | 6.293184e-50 | -8.615850e-47 |
| Msa0271770 | Msa0467380 | 0.801891 | 7.267942e-49 | -8.615850e-47 |
| Msa0271770 | Msa0469620 | -0.801334 | 9.458441e-49 | -8.615850e-47 |
| Msa0271770 | Msa0476680 | 0.831071 | 2.055191e-55 | -8.615850e-47 |
| Msa0271770 | Msa0481970 | 0.837032 | 6.601215e-57 | -8.615850e-47 |
| Msa0271770 | Msa0482940 | 0.814068 | 1.860041e-51 | -8.615850e-47 |
| Msa0271770 | Msa0483120 | 0.843198 | 1.623638e-58 | -8.615850e-47 |
| Msa0271770 | Msa0485240 | 0.809681 | 1.678296e-50 | -8.615850e-47 |
| Msa0271770 | Msa0485490 | 0.806359 | 8.548978e-50 | -8.615850e-47 |
| Msa0271770 | Msa0518170 | 0.800912 | 1.153684e-48 | -8.615850e-47 |
| Msa0271770 | Msa0521010 | 0.832753 | 7.895229e-56 | -8.615850e-47 |
| Msa0271770 | Msa0527540 | 0.801219 | 9.983759e-49 | -8.615850e-47 |
| Msa0271770 | Msa0542290 | 0.852377 | 4.806089e-61 | -8.615850e-47 |
| Msa0271770 | Msa0542560 | 0.811875 | 5.625796e-51 | -8.615850e-47 |
| Msa0271770 | Msa0544840 | 0.805021 | 1.632440e-49 | -8.615850e-47 |
| Msa0271770 | Msa0545700 | 0.815299 | 9.924038e-52 | -8.615850e-47 |
| Msa0271770 | Msa0545850 | 0.800277 | 1.554261e-48 | -8.615850e-47 |
| Msa0271770 | Msa0547160 | 0.828809 | 7.315108e-55 | -8.615850e-47 |
| Msa0271770 | Msa0548920 | 0.813988 | 1.936350e-51 | -8.615850e-47 |
| Msa0271770 | Msa0549890 | 0.825390 | 4.812972e-54 | -8.615850e-47 |
| Msa0271770 | Msa0567340 | 0.803543 | 3.316350e-49 | -8.615850e-47 |
| Msa0271770 | Msa0587910 | 0.805022 | 1.631535e-49 | -8.615850e-47 |
| Msa0271770 | Msa0602980 | 0.831461 | 1.647506e-55 | -8.615850e-47 |
| Msa0271770 | Msa0604290 | 0.809781 | 1.597090e-50 | -8.615850e-47 |
| Msa0271770 | Msa0610840 | -0.832345 | 9.966153e-56 | -8.615850e-47 |
| Msa0271770 | Msa0613340 | 0.839142 | 1.891028e-57 | -8.615850e-47 |
| Msa0271770 | Msa0618470 | 0.842587 | 2.361538e-58 | -8.615850e-47 |
| Msa0271770 | Msa0629240 | 0.821338 | 4.257241e-53 | -8.615850e-47 |
| Msa0271770 | Msa0642970 | 0.801380 | 9.254894e-49 | -8.615850e-47 |
| Msa0271770 | Msa0649220 | 0.818226 | 2.189489e-52 | -8.615850e-47 |
| Msa0271770 | Msa0661830 | 0.804507 | 2.089593e-49 | -8.615850e-47 |
| Msa0271770 | Msa0663800 | 0.855809 | 4.916202e-62 | -8.615850e-47 |
| Msa0271770 | Msa0672450 | 0.817062 | 4.007117e-52 | -8.615850e-47 |
| Msa0271770 | Msa0682680 | 0.858139 | 1.011342e-62 | -8.615850e-47 |
| Msa0271770 | Msa0701360 | 0.804094 | 2.547725e-49 | -8.615850e-47 |
| Msa0271770 | Msa0703780 | 0.814602 | 1.416879e-51 | -8.615850e-47 |
| Msa0271770 | Msa0705990 | 0.816897 | 4.363517e-52 | -8.615850e-47 |
| Msa0271770 | Msa0707250 | 0.818212 | 2.205704e-52 | -8.615850e-47 |
| Msa0271770 | Msa0709120 | 0.819536 | 1.103412e-52 | -8.615850e-47 |
| Msa0271770 | Msa0711150 | 0.843331 | 1.496095e-58 | -8.615850e-47 |
| Msa0271770 | Msa0718100 | 0.808487 | 3.023191e-50 | -8.615850e-47 |
| Msa0271770 | Msa0719180 | 0.803825 | 2.898115e-49 | -8.615850e-47 |
| Msa0271770 | Msa0741440 | 0.816548 | 5.223892e-52 | -8.615850e-47 |
| Msa0271770 | Msa0750650 | 0.834776 | 2.464602e-56 | -8.615850e-47 |
| Msa0271770 | Msa0755050 | 0.800342 | 1.507370e-48 | -8.615850e-47 |
| Msa0271770 | Msa0756380 | 0.813737 | 2.199427e-51 | -8.615850e-47 |
| Msa0271770 | Msa0768370 | 0.804869 | 1.755844e-49 | -8.615850e-47 |
| Msa0271770 | Msa0797250 | 0.812329 | 4.478792e-51 | -8.615850e-47 |
| Msa0271770 | Msa0800370 | 0.813052 | 3.111307e-51 | -8.615850e-47 |
| Msa0271770 | Msa0810270 | 0.810202 | 1.296113e-50 | -8.615850e-47 |
| Msa0271770 | Msa0822500 | 0.842643 | 2.282025e-58 | -8.615850e-47 |
| Msa0271770 | Msa0830230 | 0.808219 | 3.447830e-50 | -8.615850e-47 |
| Msa0271770 | Msa0832340 | 0.809921 | 1.490031e-50 | -8.615850e-47 |
| Msa0271770 | Msa0835230 | 0.803623 | 3.191792e-49 | -8.615850e-47 |
| Msa0271770 | Msa0844420 | 0.880988 | 3.486093e-70 | -8.615850e-47 |
| Msa0271770 | Msa0844440 | 0.808667 | 2.767548e-50 | -8.615850e-47 |
| Msa0271770 | Msa0844490 | 0.862594 | 4.537749e-64 | -8.615850e-47 |
| Msa0271770 | Msa0849030 | 0.823455 | 1.372342e-53 | -8.615850e-47 |
| Msa0271770 | Msa0865030 | 0.804162 | 2.466085e-49 | -8.615850e-47 |
| Msa0271770 | Msa0867520 | -0.819798 | 9.612591e-53 | -8.615850e-47 |
| Msa0271770 | Msa0873870 | 0.804956 | 1.684434e-49 | -8.615850e-47 |
| Msa0271770 | Msa0888260 | 0.813574 | 2.389470e-51 | -8.615850e-47 |
| Msa0271770 | Msa0890550 | 0.802415 | 5.672842e-49 | -8.615850e-47 |
| Msa0271770 | Msa0894710 | 0.830493 | 2.847009e-55 | -8.615850e-47 |
| Msa0271770 | Msa0897330 | 0.804608 | 1.991260e-49 | -8.615850e-47 |
| Msa0271770 | Msa0903780 | 0.801168 | 1.022412e-48 | -8.615850e-47 |
| Msa0271770 | Msa0914270 | 0.823287 | 1.502212e-53 | -8.615850e-47 |
| Msa0271770 | Msa0925190 | 0.820784 | 5.711630e-53 | -8.615850e-47 |
| Msa0271770 | Msa0927380 | 0.825941 | 3.562505e-54 | -8.615850e-47 |
| Msa0271770 | Msa0934140 | 0.800281 | 1.551392e-48 | -8.615850e-47 |
| Msa0271770 | Msa0936390 | 0.800054 | 1.725104e-48 | -8.615850e-47 |
| Msa0271770 | Msa0944610 | 0.835794 | 1.363425e-56 | -8.615850e-47 |
| Msa0271770 | Msa0948320 | 0.827045 | 1.943424e-54 | -8.615850e-47 |
| Msa0271770 | Msa0958000 | 0.805514 | 1.286592e-49 | -8.615850e-47 |
| Msa0271770 | Msa0960390 | 0.821247 | 4.469504e-53 | -8.615850e-47 |
| Msa0271770 | Msa0969370 | 0.807724 | 4.394493e-50 | -8.615850e-47 |
| Msa0271770 | Msa0969810 | 0.829105 | 6.199041e-55 | -8.615850e-47 |
| Msa0271770 | Msa0974080 | 0.834451 | 2.974299e-56 | -8.615850e-47 |
| Msa0271770 | Msa0974950 | 0.848785 | 4.910629e-60 | -8.615850e-47 |
| Msa0271770 | Msa0987840 | 0.853136 | 2.916094e-61 | -8.615850e-47 |
| Msa0271770 | Msa0994370 | 0.824398 | 8.250370e-54 | -8.615850e-47 |
| Msa0271770 | Msa0994910 | 0.810665 | 1.029422e-50 | -8.615850e-47 |
| Msa0271770 | Msa1001390 | 0.800481 | 1.412185e-48 | -8.615850e-47 |
| Msa0271770 | Msa1006810 | 0.808606 | 2.851478e-50 | -8.615850e-47 |
| Msa0271770 | Msa1011090 | 0.827337 | 1.654394e-54 | -8.615850e-47 |
| Msa0271770 | Msa1029050 | 0.832977 | 6.945162e-56 | -8.615850e-47 |
| Msa0271770 | Msa1034270 | 0.816666 | 4.916123e-52 | -8.615850e-47 |
| Msa0271770 | Msa1034290 | 0.807962 | 3.912057e-50 | -8.615850e-47 |
| Msa0271770 | Msa1034310 | 0.812881 | 3.391250e-51 | -8.615850e-47 |
| Msa0271770 | Msa1036710 | -0.810033 | 1.409287e-50 | -8.615850e-47 |
| Msa0271770 | Msa1037520 | 0.807827 | 4.178842e-50 | -8.615850e-47 |
| Msa0271770 | Msa1042660 | 0.824112 | 9.626914e-54 | -8.615850e-47 |
| Msa0271770 | Msa1048160 | 0.821819 | 3.297073e-53 | -8.615850e-47 |
| Msa0271770 | Msa1051770 | 0.802840 | 4.635659e-49 | -8.615850e-47 |
| Msa0271770 | Msa1063420 | 0.846181 | 2.552043e-59 | -8.615850e-47 |
| Msa0271770 | Msa1064250 | 0.813983 | 1.941479e-51 | -8.615850e-47 |
| Msa0271770 | Msa1072900 | 0.822728 | 2.027864e-53 | -8.615850e-47 |
| Msa0271770 | Msa1076960 | 0.826371 | 2.814595e-54 | -8.615850e-47 |
| Msa0271770 | Msa1081790 | -0.812010 | 5.257139e-51 | -8.615850e-47 |
| Msa0271770 | Msa1089450 | 0.838275 | 3.168549e-57 | -8.615850e-47 |
| Msa0271770 | Msa1089460 | 0.839860 | 1.230808e-57 | -8.615850e-47 |
| Msa0271770 | Msa1096070 | 0.811434 | 7.013465e-51 | -8.615850e-47 |
| Msa0271770 | Msa1096620 | 0.823581 | 1.282725e-53 | -8.615850e-47 |
| Msa0271770 | Msa1100130 | -0.814841 | 1.254689e-51 | -8.615850e-47 |
| Msa0271770 | Msa1108690 | 0.802570 | 5.268531e-49 | -8.615850e-47 |
| Msa0271770 | Msa1111870 | 0.820594 | 6.316961e-53 | -8.615850e-47 |
| Msa0271770 | Msa1121490 | 0.804549 | 2.047766e-49 | -8.615850e-47 |
| Msa0271770 | Msa1122860 | 0.823331 | 1.467196e-53 | -8.615850e-47 |
| Msa0271770 | Msa1137570 | 0.815578 | 8.602420e-52 | -8.615850e-47 |
| Msa0271770 | Msa1158640 | -0.811764 | 5.946866e-51 | -8.615850e-47 |
| Msa0271770 | Msa1160740 | -0.807505 | 4.892289e-50 | -8.615850e-47 |
| Msa0271770 | Msa1162780 | 0.804242 | 2.373599e-49 | -8.615850e-47 |
| Msa0271770 | Msa1167340 | 0.800040 | 1.736851e-48 | -8.615850e-47 |
| Msa0271770 | Msa1168580 | 0.804719 | 1.886997e-49 | -8.615850e-47 |
| Msa0271770 | Msa1173300 | 0.806617 | 7.542280e-50 | -8.615850e-47 |
| Msa0271770 | Msa1175200 | 0.824994 | 5.970503e-54 | -8.615850e-47 |
| Msa0271770 | Msa1178580 | 0.803608 | 3.213977e-49 | -8.615850e-47 |
| Msa0271770 | Msa1207310 | 0.809124 | 2.209925e-50 | -8.615850e-47 |
| Msa0271770 | Msa1209440 | 0.826827 | 2.190376e-54 | -8.615850e-47 |
| Msa0271770 | Msa1210020 | 0.818393 | 2.007008e-52 | -8.615850e-47 |
| Msa0271770 | Msa1211230 | -0.802753 | 4.829950e-49 | -8.615850e-47 |
| Msa0271770 | Msa1211420 | -0.827463 | 1.542756e-54 | -8.615850e-47 |
| Msa0271770 | Msa1221330 | 0.810611 | 1.057420e-50 | -8.615850e-47 |
| Msa0271770 | Msa1225100 | 0.824414 | 8.176848e-54 | -8.615850e-47 |
| Msa0271770 | Msa1226270 | 0.803524 | 3.345541e-49 | -8.615850e-47 |
| Msa0271770 | Msa1227730 | 0.823228 | 1.550528e-53 | -8.615850e-47 |
| Msa0271770 | Msa1232740 | 0.837849 | 4.076824e-57 | -8.615850e-47 |
| Msa0271770 | Msa1240970 | 0.822080 | 2.867645e-53 | -8.615850e-47 |
| Msa0271770 | Msa1243870 | 0.803471 | 3.431261e-49 | -8.615850e-47 |
| Msa0271770 | Msa1248830 | 0.839644 | 1.400528e-57 | -8.615850e-47 |
| Msa0271770 | Msa1254730 | 0.807267 | 5.494300e-50 | -8.615850e-47 |
| Msa0271770 | Msa1262720 | 0.819547 | 1.096916e-52 | -8.615850e-47 |
| Msa0271770 | Msa1270660 | 0.813377 | 2.639318e-51 | -8.615850e-47 |
| Msa0271770 | Msa1270730 | 0.820216 | 7.712745e-53 | -8.615850e-47 |
| Msa0271770 | Msa1271130 | 0.830931 | 2.224066e-55 | -8.615850e-47 |
| Msa0271770 | Msa1274560 | 0.831166 | 1.947051e-55 | -8.615850e-47 |
| Msa0271770 | Msa1275590 | 0.819970 | 8.780469e-53 | -8.615850e-47 |
| Msa0271770 | Msa1276150 | 0.805828 | 1.105545e-49 | -8.615850e-47 |
| Msa0271770 | Msa1276600 | 0.825910 | 3.621804e-54 | -8.615850e-47 |
| Msa0271770 | Msa1277690 | 0.800303 | 1.535099e-48 | -8.615850e-47 |
| Msa0271770 | Msa1285550 | 0.800150 | 1.649853e-48 | -8.615850e-47 |
| Msa0271770 | Msa1286800 | 0.820944 | 5.247426e-53 | -8.615850e-47 |
| Msa0271770 | Msa1298510 | 0.812622 | 3.864632e-51 | -8.615850e-47 |
| Msa0271770 | Msa1305810 | 0.837160 | 6.122958e-57 | -8.615850e-47 |
| Msa0271770 | Msa1306560 | 0.800489 | 1.406960e-48 | -8.615850e-47 |
| Msa0271770 | Msa1307600 | 0.800059 | 1.721154e-48 | -8.615850e-47 |
| Msa0271770 | Msa1313320 | 0.844865 | 5.802918e-59 | -8.615850e-47 |
| Msa0271770 | Msa1316360 | 0.809220 | 2.107448e-50 | -8.615850e-47 |
| Msa0271770 | Msa1323690 | 0.823532 | 1.316482e-53 | -8.615850e-47 |
| Msa0271770 | Msa1329050 | -0.800649 | 1.305059e-48 | -8.615850e-47 |
| Msa0271770 | Msa1329870 | 0.822902 | 1.847387e-53 | -8.615850e-47 |
| Msa0271770 | Msa1331080 | 0.802535 | 5.356503e-49 | -8.615850e-47 |
| Msa0271770 | Msa1331760 | 0.805670 | 1.193293e-49 | -8.615850e-47 |
| Msa0271770 | Msa1336560 | 0.810121 | 1.349316e-50 | -8.615850e-47 |
| Msa0271770 | Msa1342630 | 0.826178 | 3.127882e-54 | -8.615850e-47 |
| Msa0271770 | Msa1345100 | 0.804284 | 2.325339e-49 | -8.615850e-47 |
| Msa0271770 | Msa1345940 | 0.817415 | 3.337553e-52 | -8.615850e-47 |
| Msa0271770 | Msa1355890 | 0.809883 | 1.518008e-50 | -8.615850e-47 |
| Msa0271770 | Msa1366970 | 0.833944 | 3.986271e-56 | -8.615850e-47 |
| Msa0271770 | Msa1370590 | 0.812822 | 3.494241e-51 | -8.615850e-47 |
| Msa0271770 | Msa1380220 | 0.822026 | 2.951693e-53 | -8.615850e-47 |
| Msa0271770 | Msa1384100 | 0.813710 | 2.230514e-51 | -8.615850e-47 |
| Msa0271770 | Msa1390690 | 0.801767 | 7.709278e-49 | -8.615850e-47 |
| Msa0271770 | Msa1390700 | 0.839703 | 1.351713e-57 | -8.615850e-47 |
| Msa0271770 | Msa1392910 | 0.827154 | 1.829702e-54 | -8.615850e-47 |
| Msa0271770 | Msa1394310 | 0.815439 | 9.240327e-52 | -8.615850e-47 |
| Msa0271770 | Msa1403340 | 0.811567 | 6.563697e-51 | -8.615850e-47 |
| Msa0271770 | Msa1404610 | 0.801385 | 9.233560e-49 | -8.615850e-47 |
| Msa0271770 | Msa1405220 | 0.814120 | 1.811512e-51 | -8.615850e-47 |
| Msa0271770 | Msa1407190 | 0.800701 | 1.273772e-48 | -8.615850e-47 |
| Msa0271770 | Msa1412530 | 0.830092 | 3.567674e-55 | -8.615850e-47 |
| Msa0271770 | Msa1412540 | 0.804599 | 1.999844e-49 | -8.615850e-47 |
| Msa0271770 | Msa1418240 | 0.801529 | 8.626817e-49 | -8.615850e-47 |
| Msa0271770 | Msa1419690 | 0.829036 | 6.444084e-55 | -8.615850e-47 |
| Msa0271770 | Msa1423780 | 0.811051 | 8.496034e-51 | -8.615850e-47 |
| Msa0271770 | Msa1428780 | 0.826007 | 3.435539e-54 | -8.615850e-47 |
| Msa0271770 | Msa1437270 | 0.810706 | 1.008715e-50 | -8.615850e-47 |
| Msa0271770 | Msa1437560 | 0.807221 | 5.620482e-50 | -8.615850e-47 |
| Msa0271770 | Msa1437730 | 0.809222 | 2.105413e-50 | -8.615850e-47 |
| Msa0271770 | Msa1442920 | 0.813474 | 2.513732e-51 | -8.615850e-47 |
| Msa0271770 | Msa1444120 | 0.813561 | 2.405393e-51 | -8.615850e-47 |
| Msa0271770 | Msa1445390 | -0.813107 | 3.025515e-51 | -8.615850e-47 |
| Msa0271770 | Msa1449340 | -0.814578 | 1.434787e-51 | -8.615850e-47 |
| Msa0271770 | Msa1452710 | 0.830591 | 2.693577e-55 | -8.615850e-47 |
| Msa0271770 | Msa1453880 | 0.802043 | 6.763596e-49 | -8.615850e-47 |
| Msa0271770 | Msa1454450 | 0.837508 | 4.987677e-57 | -8.615850e-47 |
| Msa0271770 | Msa1454570 | 0.829279 | 5.625762e-55 | -8.615850e-47 |
| Msa0271770 | Msa1456230 | 0.802718 | 4.910535e-49 | -8.615850e-47 |
| Msa0271770 | Msa1457160 | 0.825070 | 5.727295e-54 | -8.615850e-47 |
| Msa0271770 | Msa1458340 | 0.801140 | 1.036329e-48 | -8.615850e-47 |
| Msa0271770 | Msa1458750 | 0.806358 | 8.551925e-50 | -8.615850e-47 |
| Msa0271770 | Msa1460320 | -0.802808 | 4.705959e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0271770 | MtrunA17_Chr4g0035001 | 83.784 | 37 | 6 | 0 | 1 | 37 | 1 | 37 | 3.00e-17 | 70.9 |
| Msa0271770 | MtrunA17_Chr4g0035051 | 77.778 | 36 | 8 | 0 | 2 | 37 | 4 | 39 | 1.04e-15 | 65.9 |
| Msa0271770 | MtrunA17_Chr4g0035031 | 72.222 | 36 | 10 | 0 | 2 | 37 | 4 | 39 | 1.09e-13 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0271770 | AT4G39260.3 | 62.162 | 37 | 14 | 0 | 1 | 37 | 1 | 37 | 2.03e-13 | 59.7 |
| Msa0271770 | AT4G39260.4 | 62.162 | 37 | 14 | 0 | 1 | 37 | 1 | 37 | 4.18e-13 | 59.3 |
| Msa0271770 | AT4G39260.2 | 62.162 | 37 | 14 | 0 | 1 | 37 | 1 | 37 | 4.33e-13 | 59.7 |
| Msa0271770 | AT4G39260.1 | 62.162 | 37 | 14 | 0 | 1 | 37 | 1 | 37 | 9.84e-13 | 59.7 |
| Msa0271770 | AT2G21660.2 | 63.889 | 36 | 13 | 0 | 2 | 37 | 4 | 39 | 1.69e-12 | 58.9 |
| Msa0271770 | AT2G21660.1 | 63.889 | 36 | 13 | 0 | 2 | 37 | 4 | 39 | 2.24e-12 | 58.9 |
Find 28 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATGAGTTATTGGAAAA+TGG | 0.275604 | 2_3:+3289068 | Msa0271770:CDS |
| TTTGATACTGTTAGTGGGTT+GGG | 0.320216 | 2_3:+3289159 | Msa0271770:three_prime_UTR |
| CTTTGTTGGTGGACTTGCTT+GGG | 0.330507 | 2_3:+3287878 | Msa0271770:CDS |
| AGTATCCTTCCATGTTGAAT+AGG | 0.360036 | 2_3:+3289202 | Msa0271770:three_prime_UTR |
| GCTTTGTTGGTGGACTTGCT+TGG | 0.424231 | 2_3:+3287877 | Msa0271770:CDS |
| ATTTGATACTGTTAGTGGGT+TGG | 0.424241 | 2_3:+3289158 | Msa0271770:three_prime_UTR |
| GAGTTATTTGATACTGTTAG+TGG | 0.457639 | 2_3:+3289153 | Msa0271770:exon |
| TGGGTTGGGTCCGTTTCAAT+CGG | 0.460227 | 2_3:+3289173 | Msa0271770:three_prime_UTR |
| TTTCTCAAGAGCTTCGTTGT+CGG | 0.469976 | 2_3:-3287904 | None:intergenic |
| TTTCTGAAGGGATAGTTTGT+CGG | 0.484974 | 2_3:+3289225 | Msa0271770:three_prime_UTR |
| GTTGAATATCGATGCTTTGT+TGG | 0.494645 | 2_3:+3287864 | Msa0271770:CDS |
| TAACAGTATCAAATAACTCA+TGG | 0.495959 | 2_3:-3289149 | None:intergenic |
| CTCAAGAGCTTCGTTGTCGG+TGG | 0.498530 | 2_3:-3287901 | None:intergenic |
| CATGTTGAATAGGTTTCTGA+AGG | 0.502342 | 2_3:+3289212 | Msa0271770:three_prime_UTR |
| CATTTAAGAAGAAACTCAAC+TGG | 0.523291 | 2_3:+3289092 | Msa0271770:CDS |
| GGCTGTATTGTGTGTGACTA+CGG | 0.531777 | 2_3:+3289037 | Msa0271770:CDS |
| TACTTGTTTGCCGATTGAAA+CGG | 0.532031 | 2_3:-3289183 | None:intergenic |
| TGGTGAAATCGTCGAATCAA+AGG | 0.540522 | 2_3:+3287941 | Msa0271770:CDS |
| TGATTCGACGATTTCACCAA+AGG | 0.557991 | 2_3:-3287937 | None:intergenic |
| GTATCAAATAACTCATGGGA+TGG | 0.562277 | 2_3:-3289144 | None:intergenic |
| GAATATCGATGCTTTGTTGG+TGG | 0.563081 | 2_3:+3287867 | Msa0271770:CDS |
| AACAGTATCAAATAACTCAT+GGG | 0.574503 | 2_3:-3289148 | None:intergenic |
| TCGATATTCAACTTCCGCCA+TGG | 0.590661 | 2_3:-3287853 | None:intergenic |
| CTTCAGAAACCTATTCAACA+TGG | 0.594063 | 2_3:-3289211 | None:intergenic |
| AGAAACCTATTCAACATGGA+AGG | 0.594787 | 2_3:-3289207 | None:intergenic |
| TATCAAATAACTCATGGGAT+GGG | 0.603142 | 2_3:-3289143 | None:intergenic |
| AGTTATTTGATACTGTTAGT+GGG | 0.608476 | 2_3:+3289154 | Msa0271770:exon |
| ATGTTGAATAGGTTTCTGAA+GGG | 0.614607 | 2_3:+3289213 | Msa0271770:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTGGAAAATAAA+GGG | - | chr2_3:3288639-3288658 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTGGAAAATAA+AGG | - | chr2_3:3288640-3288659 | None:intergenic | 10.0% |
| !!! | TATTTTCCAAAAAAAAAAAA+AGG | + | chr2_3:3288641-3288660 | Msa0271770:intron | 10.0% |
| !!! | TTTTTTTTTTGGAAAATAAA+GGG | - | chr2_3:3288639-3288658 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTGGAAAATAA+AGG | - | chr2_3:3288640-3288659 | None:intergenic | 10.0% |
| !!! | TATTTTCCAAAAAAAAAAAA+AGG | + | chr2_3:3288641-3288660 | Msa0271770:intron | 10.0% |
| !!! | TAAACACCTTTTTTTTTTTT+TGG | - | chr2_3:3288650-3288669 | None:intergenic | 15.0% |
| !! | AATTATAGCTTGATTAAATT+TGG | + | chr2_3:3288951-3288970 | Msa0271770:intron | 15.0% |
| !!! | TAAACACCTTTTTTTTTTTT+TGG | - | chr2_3:3288650-3288669 | None:intergenic | 15.0% |
| !! | AATTATAGCTTGATTAAATT+TGG | + | chr2_3:3288951-3288970 | Msa0271770:intron | 15.0% |
| !!! | GTTTGATAATAAAACAACTA+GGG | - | chr2_3:3288221-3288240 | None:intergenic | 20.0% |
| !!! | AGTTTGATAATAAAACAACT+AGG | - | chr2_3:3288222-3288241 | None:intergenic | 20.0% |
| !! | TATGTTAATTTCATGTTTAC+TGG | + | chr2_3:3288285-3288304 | Msa0271770:intron | 20.0% |
| !! | TGAACTAAACTAAATTGAAT+TGG | + | chr2_3:3288392-3288411 | Msa0271770:intron | 20.0% |
| !! | GAACTAAACTAAATTGAATT+GGG | + | chr2_3:3288393-3288412 | Msa0271770:intron | 20.0% |
| !! | AACTAAACTAAATTGAATTG+GGG | + | chr2_3:3288394-3288413 | Msa0271770:intron | 20.0% |
| !! | TACTTGAAGAATTACATAAT+GGG | - | chr2_3:3288612-3288631 | None:intergenic | 20.0% |
| !! | TTACTTGAAGAATTACATAA+TGG | - | chr2_3:3288613-3288632 | None:intergenic | 20.0% |
| !! | ATTATGTAATTCTTCAAGTA+AGG | + | chr2_3:3288612-3288631 | Msa0271770:intron | 20.0% |
| !!! | AAAAAAAAGGTGTTTATTTG+TGG | + | chr2_3:3288654-3288673 | Msa0271770:intron | 20.0% |
| !!! | ATTTTACAACAATGAGTTAT+TGG | + | chr2_3:3289061-3289080 | Msa0271770:CDS | 20.0% |
| !!! | GTTTGATAATAAAACAACTA+GGG | - | chr2_3:3288221-3288240 | None:intergenic | 20.0% |
| !!! | AGTTTGATAATAAAACAACT+AGG | - | chr2_3:3288222-3288241 | None:intergenic | 20.0% |
| !! | TATGTTAATTTCATGTTTAC+TGG | + | chr2_3:3288285-3288304 | Msa0271770:intron | 20.0% |
| !! | TGAACTAAACTAAATTGAAT+TGG | + | chr2_3:3288392-3288411 | Msa0271770:intron | 20.0% |
| !! | GAACTAAACTAAATTGAATT+GGG | + | chr2_3:3288393-3288412 | Msa0271770:intron | 20.0% |
| !! | AACTAAACTAAATTGAATTG+GGG | + | chr2_3:3288394-3288413 | Msa0271770:intron | 20.0% |
| !! | TACTTGAAGAATTACATAAT+GGG | - | chr2_3:3288612-3288631 | None:intergenic | 20.0% |
| !! | TTACTTGAAGAATTACATAA+TGG | - | chr2_3:3288613-3288632 | None:intergenic | 20.0% |
| !! | ATTATGTAATTCTTCAAGTA+AGG | + | chr2_3:3288612-3288631 | Msa0271770:intron | 20.0% |
| !!! | AAAAAAAAGGTGTTTATTTG+TGG | + | chr2_3:3288654-3288673 | Msa0271770:intron | 20.0% |
| !!! | ATTTTACAACAATGAGTTAT+TGG | + | chr2_3:3289061-3289080 | Msa0271770:CDS | 20.0% |
| ! | TGAAAAATAGAGGAAAAGAA+TGG | - | chr2_3:3288053-3288072 | None:intergenic | 25.0% |
| ! | TGACAATTGATGAAAAATAG+AGG | - | chr2_3:3288063-3288082 | None:intergenic | 25.0% |
| ! | AACTATTCATTCTAATTCCT+TGG | + | chr2_3:3288238-3288257 | Msa0271770:intron | 25.0% |
| ! | CTTCAAATTATTGTTAACTG+AGG | + | chr2_3:3288344-3288363 | Msa0271770:intron | 25.0% |
| ! | TAAATTGAATTGGGGAAATA+GGG | + | chr2_3:3288402-3288421 | Msa0271770:intron | 25.0% |
| ! | AGAGAAATGGTTGAATAAAT+TGG | + | chr2_3:3288515-3288534 | Msa0271770:intron | 25.0% |
| ! | ATATTCAACTGTTCAATGTT+TGG | + | chr2_3:3288724-3288743 | Msa0271770:intron | 25.0% |
| !! | TCTTGTTAGTTCTTTGAATT+TGG | + | chr2_3:3288758-3288777 | Msa0271770:intron | 25.0% |
| !!! | TCGGTGTTTTATTTTTGTTT+CGG | + | chr2_3:3288794-3288813 | Msa0271770:intron | 25.0% |
| ! | CATAAAGTTGTTTGTTTGTA+AGG | + | chr2_3:3288833-3288852 | Msa0271770:intron | 25.0% |
| ! | AAAAATTGTAGCATACACTA+AGG | - | chr2_3:3288926-3288945 | None:intergenic | 25.0% |
| ! | ATAGCTTGATTAAATTTGGT+TGG | + | chr2_3:3288955-3288974 | Msa0271770:intron | 25.0% |
| !!! | TTTTGTTATGACATAACAGA+TGG | + | chr2_3:3289016-3289035 | Msa0271770:intron | 25.0% |
| ! | AACAATGAGTTATTGGAAAA+TGG | + | chr2_3:3289068-3289087 | Msa0271770:CDS | 25.0% |
| ! | AACAGTATCAAATAACTCAT+GGG | - | chr2_3:3289151-3289170 | None:intergenic | 25.0% |
| ! | TAACAGTATCAAATAACTCA+TGG | - | chr2_3:3289152-3289171 | None:intergenic | 25.0% |
| ! | AGTTATTTGATACTGTTAGT+GGG | + | chr2_3:3289154-3289173 | Msa0271770:exon | 25.0% |
| ! | TGAAAAATAGAGGAAAAGAA+TGG | - | chr2_3:3288053-3288072 | None:intergenic | 25.0% |
| ! | TGACAATTGATGAAAAATAG+AGG | - | chr2_3:3288063-3288082 | None:intergenic | 25.0% |
| ! | AACTATTCATTCTAATTCCT+TGG | + | chr2_3:3288238-3288257 | Msa0271770:intron | 25.0% |
| ! | CTTCAAATTATTGTTAACTG+AGG | + | chr2_3:3288344-3288363 | Msa0271770:intron | 25.0% |
| ! | TAAATTGAATTGGGGAAATA+GGG | + | chr2_3:3288402-3288421 | Msa0271770:intron | 25.0% |
| ! | AGAGAAATGGTTGAATAAAT+TGG | + | chr2_3:3288515-3288534 | Msa0271770:intron | 25.0% |
| ! | ATATTCAACTGTTCAATGTT+TGG | + | chr2_3:3288724-3288743 | Msa0271770:intron | 25.0% |
| !! | TCTTGTTAGTTCTTTGAATT+TGG | + | chr2_3:3288758-3288777 | Msa0271770:intron | 25.0% |
| !!! | TCGGTGTTTTATTTTTGTTT+CGG | + | chr2_3:3288794-3288813 | Msa0271770:intron | 25.0% |
| ! | CATAAAGTTGTTTGTTTGTA+AGG | + | chr2_3:3288833-3288852 | Msa0271770:intron | 25.0% |
| ! | AAAAATTGTAGCATACACTA+AGG | - | chr2_3:3288926-3288945 | None:intergenic | 25.0% |
| ! | ATAGCTTGATTAAATTTGGT+TGG | + | chr2_3:3288955-3288974 | Msa0271770:intron | 25.0% |
| !!! | TTTTGTTATGACATAACAGA+TGG | + | chr2_3:3289016-3289035 | Msa0271770:intron | 25.0% |
| ! | AACAATGAGTTATTGGAAAA+TGG | + | chr2_3:3289068-3289087 | Msa0271770:CDS | 25.0% |
| ! | AACAGTATCAAATAACTCAT+GGG | - | chr2_3:3289151-3289170 | None:intergenic | 25.0% |
| ! | TAACAGTATCAAATAACTCA+TGG | - | chr2_3:3289152-3289171 | None:intergenic | 25.0% |
| ! | AGTTATTTGATACTGTTAGT+GGG | + | chr2_3:3289154-3289173 | Msa0271770:exon | 25.0% |
| GATTAACAGTTATGGATTTG+GGG | - | chr2_3:3288137-3288156 | None:intergenic | 30.0% | |
| CGATTAACAGTTATGGATTT+GGG | - | chr2_3:3288138-3288157 | None:intergenic | 30.0% | |
| TCGATTAACAGTTATGGATT+TGG | - | chr2_3:3288139-3288158 | None:intergenic | 30.0% | |
| GAAAGAATCATAAGAATCCA+AGG | - | chr2_3:3288258-3288277 | None:intergenic | 30.0% | |
| CTAAATTGAATTGGGGAAAT+AGG | + | chr2_3:3288401-3288420 | Msa0271770:intron | 30.0% | |
| AAGAAGTTCAACATCATCAT+GGG | + | chr2_3:3288462-3288481 | Msa0271770:intron | 30.0% | |
| ! | TTTTCTCCTTCTGAGTAAAT+AGG | + | chr2_3:3288569-3288588 | Msa0271770:intron | 30.0% |
| GATTTACCTATTTACTCAGA+AGG | - | chr2_3:3288578-3288597 | None:intergenic | 30.0% | |
| AGGTGTTTATTTGTGGAATT+AGG | + | chr2_3:3288661-3288680 | Msa0271770:intron | 30.0% | |
| ATTTGGTATAATTGCAGAGT+CGG | + | chr2_3:3288775-3288794 | Msa0271770:intron | 30.0% | |
| !!! | CGGTGTTTTATTTTTGTTTC+GGG | + | chr2_3:3288795-3288814 | Msa0271770:intron | 30.0% |
| CATTTAAGAAGAAACTCAAC+TGG | + | chr2_3:3289092-3289111 | Msa0271770:CDS | 30.0% | |
| TATCAAATAACTCATGGGAT+GGG | - | chr2_3:3289146-3289165 | None:intergenic | 30.0% | |
| GAGTTATTTGATACTGTTAG+TGG | + | chr2_3:3289153-3289172 | Msa0271770:exon | 30.0% | |
| ATGTTGAATAGGTTTCTGAA+GGG | + | chr2_3:3289213-3289232 | Msa0271770:three_prime_UTR | 30.0% | |
| GATTAACAGTTATGGATTTG+GGG | - | chr2_3:3288137-3288156 | None:intergenic | 30.0% | |
| CGATTAACAGTTATGGATTT+GGG | - | chr2_3:3288138-3288157 | None:intergenic | 30.0% | |
| TCGATTAACAGTTATGGATT+TGG | - | chr2_3:3288139-3288158 | None:intergenic | 30.0% | |
| GAAAGAATCATAAGAATCCA+AGG | - | chr2_3:3288258-3288277 | None:intergenic | 30.0% | |
| CTAAATTGAATTGGGGAAAT+AGG | + | chr2_3:3288401-3288420 | Msa0271770:intron | 30.0% | |
| AAGAAGTTCAACATCATCAT+GGG | + | chr2_3:3288462-3288481 | Msa0271770:intron | 30.0% | |
| ! | TTTTCTCCTTCTGAGTAAAT+AGG | + | chr2_3:3288569-3288588 | Msa0271770:intron | 30.0% |
| GATTTACCTATTTACTCAGA+AGG | - | chr2_3:3288578-3288597 | None:intergenic | 30.0% | |
| AGGTGTTTATTTGTGGAATT+AGG | + | chr2_3:3288661-3288680 | Msa0271770:intron | 30.0% | |
| ATTTGGTATAATTGCAGAGT+CGG | + | chr2_3:3288775-3288794 | Msa0271770:intron | 30.0% | |
| !!! | CGGTGTTTTATTTTTGTTTC+GGG | + | chr2_3:3288795-3288814 | Msa0271770:intron | 30.0% |
| CATTTAAGAAGAAACTCAAC+TGG | + | chr2_3:3289092-3289111 | Msa0271770:CDS | 30.0% | |
| TATCAAATAACTCATGGGAT+GGG | - | chr2_3:3289146-3289165 | None:intergenic | 30.0% | |
| GAGTTATTTGATACTGTTAG+TGG | + | chr2_3:3289153-3289172 | Msa0271770:exon | 30.0% | |
| ATGTTGAATAGGTTTCTGAA+GGG | + | chr2_3:3289213-3289232 | Msa0271770:three_prime_UTR | 30.0% | |
| GTTGAATATCGATGCTTTGT+TGG | + | chr2_3:3287864-3287883 | Msa0271770:CDS | 35.0% | |
| !!! | GAGAAAGCGTTTTTTTCCTT+TGG | + | chr2_3:3287921-3287940 | Msa0271770:CDS | 35.0% |
| CTGCAATCGATTAACAGTTA+TGG | - | chr2_3:3288145-3288164 | None:intergenic | 35.0% | |
| GAAGAAGTTCAACATCATCA+TGG | + | chr2_3:3288461-3288480 | Msa0271770:intron | 35.0% | |
| GTATCAAATAACTCATGGGA+TGG | - | chr2_3:3289147-3289166 | None:intergenic | 35.0% | |
| ! | ATTTGATACTGTTAGTGGGT+TGG | + | chr2_3:3289158-3289177 | Msa0271770:three_prime_UTR | 35.0% |
| !! | TTTGATACTGTTAGTGGGTT+GGG | + | chr2_3:3289159-3289178 | Msa0271770:three_prime_UTR | 35.0% |
| ! | TACTTGTTTGCCGATTGAAA+CGG | - | chr2_3:3289186-3289205 | None:intergenic | 35.0% |
| AGTATCCTTCCATGTTGAAT+AGG | + | chr2_3:3289202-3289221 | Msa0271770:three_prime_UTR | 35.0% | |
| AGAAACCTATTCAACATGGA+AGG | - | chr2_3:3289210-3289229 | None:intergenic | 35.0% | |
| CTTCAGAAACCTATTCAACA+TGG | - | chr2_3:3289214-3289233 | None:intergenic | 35.0% | |
| CATGTTGAATAGGTTTCTGA+AGG | + | chr2_3:3289212-3289231 | Msa0271770:three_prime_UTR | 35.0% | |
| GTTGAATATCGATGCTTTGT+TGG | + | chr2_3:3287864-3287883 | Msa0271770:CDS | 35.0% | |
| !!! | GAGAAAGCGTTTTTTTCCTT+TGG | + | chr2_3:3287921-3287940 | Msa0271770:CDS | 35.0% |
| CTGCAATCGATTAACAGTTA+TGG | - | chr2_3:3288145-3288164 | None:intergenic | 35.0% | |
| GAAGAAGTTCAACATCATCA+TGG | + | chr2_3:3288461-3288480 | Msa0271770:intron | 35.0% | |
| GTATCAAATAACTCATGGGA+TGG | - | chr2_3:3289147-3289166 | None:intergenic | 35.0% | |
| ! | ATTTGATACTGTTAGTGGGT+TGG | + | chr2_3:3289158-3289177 | Msa0271770:three_prime_UTR | 35.0% |
| !! | TTTGATACTGTTAGTGGGTT+GGG | + | chr2_3:3289159-3289178 | Msa0271770:three_prime_UTR | 35.0% |
| ! | TACTTGTTTGCCGATTGAAA+CGG | - | chr2_3:3289186-3289205 | None:intergenic | 35.0% |
| AGTATCCTTCCATGTTGAAT+AGG | + | chr2_3:3289202-3289221 | Msa0271770:three_prime_UTR | 35.0% | |
| AGAAACCTATTCAACATGGA+AGG | - | chr2_3:3289210-3289229 | None:intergenic | 35.0% | |
| CTTCAGAAACCTATTCAACA+TGG | - | chr2_3:3289214-3289233 | None:intergenic | 35.0% | |
| CATGTTGAATAGGTTTCTGA+AGG | + | chr2_3:3289212-3289231 | Msa0271770:three_prime_UTR | 35.0% | |
| ! | GAATATCGATGCTTTGTTGG+TGG | + | chr2_3:3287867-3287886 | Msa0271770:CDS | 40.0% |
| TTTCTCAAGAGCTTCGTTGT+CGG | - | chr2_3:3287907-3287926 | None:intergenic | 40.0% | |
| TGATTCGACGATTTCACCAA+AGG | - | chr2_3:3287940-3287959 | None:intergenic | 40.0% | |
| TGGTGAAATCGTCGAATCAA+AGG | + | chr2_3:3287941-3287960 | Msa0271770:CDS | 40.0% | |
| TTTCCGATCTCAGCAACAAA+CGG | - | chr2_3:3287968-3287987 | None:intergenic | 40.0% | |
| ATCGGAAATCTGACACGATT+CGG | + | chr2_3:3287980-3287999 | Msa0271770:intron | 40.0% | |
| ! | AATCTGACACGATTCGGATT+TGG | + | chr2_3:3287986-3288005 | Msa0271770:intron | 40.0% |
| TAACAGCTATGAAGCGAGAA+AGG | - | chr2_3:3288171-3288190 | None:intergenic | 40.0% | |
| !!! | CGATTCCAATTTTGCTGTTG+TGG | + | chr2_3:3288193-3288212 | Msa0271770:intron | 40.0% |
| ! | TACTGGTTGATGTCAGCATT+TGG | + | chr2_3:3288302-3288321 | Msa0271770:intron | 40.0% |
| GAATTGGGGAAATAGGGTTT+AGG | + | chr2_3:3288408-3288427 | Msa0271770:intron | 40.0% | |
| TCTGCTTCAGGAAAGAGAAA+TGG | + | chr2_3:3288502-3288521 | Msa0271770:intron | 40.0% | |
| CATCTATTGTACTCGTAGCA+TGG | + | chr2_3:3288881-3288900 | Msa0271770:intron | 40.0% | |
| TAGCATGGTGGCTGTTTATT+TGG | + | chr2_3:3288896-3288915 | Msa0271770:intron | 40.0% | |
| ! | GAATATCGATGCTTTGTTGG+TGG | + | chr2_3:3287867-3287886 | Msa0271770:CDS | 40.0% |
| TTTCTCAAGAGCTTCGTTGT+CGG | - | chr2_3:3287907-3287926 | None:intergenic | 40.0% | |
| TGATTCGACGATTTCACCAA+AGG | - | chr2_3:3287940-3287959 | None:intergenic | 40.0% | |
| TGGTGAAATCGTCGAATCAA+AGG | + | chr2_3:3287941-3287960 | Msa0271770:CDS | 40.0% | |
| TTTCCGATCTCAGCAACAAA+CGG | - | chr2_3:3287968-3287987 | None:intergenic | 40.0% | |
| ATCGGAAATCTGACACGATT+CGG | + | chr2_3:3287980-3287999 | Msa0271770:intron | 40.0% | |
| ! | AATCTGACACGATTCGGATT+TGG | + | chr2_3:3287986-3288005 | Msa0271770:intron | 40.0% |
| TAACAGCTATGAAGCGAGAA+AGG | - | chr2_3:3288171-3288190 | None:intergenic | 40.0% | |
| !!! | CGATTCCAATTTTGCTGTTG+TGG | + | chr2_3:3288193-3288212 | Msa0271770:intron | 40.0% |
| ! | TACTGGTTGATGTCAGCATT+TGG | + | chr2_3:3288302-3288321 | Msa0271770:intron | 40.0% |
| GAATTGGGGAAATAGGGTTT+AGG | + | chr2_3:3288408-3288427 | Msa0271770:intron | 40.0% | |
| TCTGCTTCAGGAAAGAGAAA+TGG | + | chr2_3:3288502-3288521 | Msa0271770:intron | 40.0% | |
| CATCTATTGTACTCGTAGCA+TGG | + | chr2_3:3288881-3288900 | Msa0271770:intron | 40.0% | |
| TAGCATGGTGGCTGTTTATT+TGG | + | chr2_3:3288896-3288915 | Msa0271770:intron | 40.0% | |
| !! | CTTTGTTGGTGGACTTGCTT+GGG | + | chr2_3:3287878-3287897 | Msa0271770:CDS | 45.0% |
| GGGATCCACAACAGCAAAAT+TGG | - | chr2_3:3288201-3288220 | None:intergenic | 45.0% | |
| TTGGGGAAATAGGGTTTAGG+AGG | + | chr2_3:3288411-3288430 | Msa0271770:intron | 45.0% | |
| TGGGGAAATAGGGTTTAGGA+GGG | + | chr2_3:3288412-3288431 | Msa0271770:intron | 45.0% | |
| CTATTGTACTCGTAGCATGG+TGG | + | chr2_3:3288884-3288903 | Msa0271770:intron | 45.0% | |
| GGCTGTATTGTGTGTGACTA+CGG | + | chr2_3:3289037-3289056 | Msa0271770:CDS | 45.0% | |
| !! | CTTTGTTGGTGGACTTGCTT+GGG | + | chr2_3:3287878-3287897 | Msa0271770:CDS | 45.0% |
| GGGATCCACAACAGCAAAAT+TGG | - | chr2_3:3288201-3288220 | None:intergenic | 45.0% | |
| TTGGGGAAATAGGGTTTAGG+AGG | + | chr2_3:3288411-3288430 | Msa0271770:intron | 45.0% | |
| TGGGGAAATAGGGTTTAGGA+GGG | + | chr2_3:3288412-3288431 | Msa0271770:intron | 45.0% | |
| CTATTGTACTCGTAGCATGG+TGG | + | chr2_3:3288884-3288903 | Msa0271770:intron | 45.0% | |
| GGCTGTATTGTGTGTGACTA+CGG | + | chr2_3:3289037-3289056 | Msa0271770:CDS | 45.0% | |
| !! | GCTTTGTTGGTGGACTTGCT+TGG | + | chr2_3:3287877-3287896 | Msa0271770:CDS | 50.0% |
| ! | GGTCCGTTTGTTGCTGAGAT+CGG | + | chr2_3:3287962-3287981 | Msa0271770:intron | 50.0% |
| GGTGACGTGATGATACCATG+TGG | + | chr2_3:3288433-3288452 | Msa0271770:intron | 50.0% | |
| GACGTGATGATACCATGTGG+AGG | + | chr2_3:3288436-3288455 | Msa0271770:intron | 50.0% | |
| GTGATGATACCATGTGGAGG+AGG | + | chr2_3:3288439-3288458 | Msa0271770:intron | 50.0% | |
| GAACTTCTTCCTCCTCCACA+TGG | - | chr2_3:3288451-3288470 | None:intergenic | 50.0% | |
| GAAGCAGACACTGAGGTTGT+CGG | - | chr2_3:3288490-3288509 | None:intergenic | 50.0% | |
| ACAACCTCAGTGTCTGCTTC+AGG | + | chr2_3:3288490-3288509 | Msa0271770:intron | 50.0% | |
| CTTTCCTGAAGCAGACACTG+AGG | - | chr2_3:3288497-3288516 | None:intergenic | 50.0% | |
| ! | GTTTCGGGTGTGACTGTTGA+TGG | + | chr2_3:3288810-3288829 | Msa0271770:intron | 50.0% |
| ! | TGGGTTGGGTCCGTTTCAAT+CGG | + | chr2_3:3289173-3289192 | Msa0271770:three_prime_UTR | 50.0% |
| !! | GCTTTGTTGGTGGACTTGCT+TGG | + | chr2_3:3287877-3287896 | Msa0271770:CDS | 50.0% |
| ! | GGTCCGTTTGTTGCTGAGAT+CGG | + | chr2_3:3287962-3287981 | Msa0271770:intron | 50.0% |
| GGTGACGTGATGATACCATG+TGG | + | chr2_3:3288433-3288452 | Msa0271770:intron | 50.0% | |
| GACGTGATGATACCATGTGG+AGG | + | chr2_3:3288436-3288455 | Msa0271770:intron | 50.0% | |
| GTGATGATACCATGTGGAGG+AGG | + | chr2_3:3288439-3288458 | Msa0271770:intron | 50.0% | |
| GAACTTCTTCCTCCTCCACA+TGG | - | chr2_3:3288451-3288470 | None:intergenic | 50.0% | |
| GAAGCAGACACTGAGGTTGT+CGG | - | chr2_3:3288490-3288509 | None:intergenic | 50.0% | |
| ACAACCTCAGTGTCTGCTTC+AGG | + | chr2_3:3288490-3288509 | Msa0271770:intron | 50.0% | |
| CTTTCCTGAAGCAGACACTG+AGG | - | chr2_3:3288497-3288516 | None:intergenic | 50.0% | |
| ! | GTTTCGGGTGTGACTGTTGA+TGG | + | chr2_3:3288810-3288829 | Msa0271770:intron | 50.0% |
| ! | TGGGTTGGGTCCGTTTCAAT+CGG | + | chr2_3:3289173-3289192 | Msa0271770:three_prime_UTR | 50.0% |
| CTCAAGAGCTTCGTTGTCGG+TGG | - | chr2_3:3287904-3287923 | None:intergenic | 55.0% | |
| CTCAAGAGCTTCGTTGTCGG+TGG | - | chr2_3:3287904-3287923 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 3287855 | 3289246 | 3287855 | ID=Msa0271770;Name=Msa0271770 |
| chr2_3 | mRNA | 3287855 | 3289246 | 3287855 | ID=Msa0271770-mRNA-1;Parent=Msa0271770;Name=Msa0271770-mRNA-1;_AED=0.38;_eAED=0.59;_QI=0|0|0.5|1|1|1|2|92|75 |
| chr2_3 | exon | 3287855 | 3287962 | 3287855 | ID=Msa0271770-mRNA-1:exon:1600;Parent=Msa0271770-mRNA-1 |
| chr2_3 | exon | 3289035 | 3289246 | 3289035 | ID=Msa0271770-mRNA-1:exon:1601;Parent=Msa0271770-mRNA-1 |
| chr2_3 | CDS | 3287855 | 3287962 | 3287855 | ID=Msa0271770-mRNA-1:cds;Parent=Msa0271770-mRNA-1 |
| chr2_3 | CDS | 3289035 | 3289154 | 3289035 | ID=Msa0271770-mRNA-1:cds;Parent=Msa0271770-mRNA-1 |
| chr2_3 | three_prime_UTR | 3289155 | 3289246 | 3289155 | ID=Msa0271770-mRNA-1:three_prime_utr;Parent=Msa0271770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
