Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537990 | XP_013454490.1 | 97.412 | 425 | 11 | 0 | 1 | 425 | 1 | 425 | 0.0 | 851 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537990 | A0A072UGG4 | 97.412 | 425 | 11 | 0 | 1 | 425 | 1 | 425 | 0.0 | 851 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015570 | Msa0537990 | 0.822393 | 2.426030e-53 | -8.615850e-47 |
| Msa0018920 | Msa0537990 | 0.803732 | 3.029071e-49 | -8.615850e-47 |
| Msa0025580 | Msa0537990 | 0.801777 | 7.671956e-49 | -8.615850e-47 |
| Msa0032180 | Msa0537990 | 0.818761 | 1.655810e-52 | -8.615850e-47 |
| Msa0032980 | Msa0537990 | 0.810129 | 1.343649e-50 | -8.615850e-47 |
| Msa0037740 | Msa0537990 | 0.812429 | 4.259536e-51 | -8.615850e-47 |
| Msa0067060 | Msa0537990 | 0.844436 | 7.569501e-59 | -8.615850e-47 |
| Msa0091350 | Msa0537990 | 0.817366 | 3.423822e-52 | -8.615850e-47 |
| Msa0108630 | Msa0537990 | 0.822974 | 1.777180e-53 | -8.615850e-47 |
| Msa0112670 | Msa0537990 | 0.812830 | 3.479700e-51 | -8.615850e-47 |
| Msa0115550 | Msa0537990 | 0.805488 | 1.303082e-49 | -8.615850e-47 |
| Msa0125590 | Msa0537990 | 0.810275 | 1.249674e-50 | -8.615850e-47 |
| Msa0127340 | Msa0537990 | 0.818009 | 2.451468e-52 | -8.615850e-47 |
| Msa0140200 | Msa0537990 | 0.819937 | 8.935761e-53 | -8.615850e-47 |
| Msa0140380 | Msa0537990 | 0.819247 | 1.284144e-52 | -8.615850e-47 |
| Msa0141640 | Msa0537990 | 0.836874 | 7.246754e-57 | -8.615850e-47 |
| Msa0141750 | Msa0537990 | 0.803422 | 3.512911e-49 | -8.615850e-47 |
| Msa0153210 | Msa0537990 | 0.803908 | 2.785098e-49 | -8.615850e-47 |
| Msa0156050 | Msa0537990 | 0.827914 | 1.202180e-54 | -8.615850e-47 |
| Msa0156090 | Msa0537990 | 0.833323 | 5.697270e-56 | -8.615850e-47 |
| Msa0165830 | Msa0537990 | 0.800142 | 1.655299e-48 | -8.615850e-47 |
| Msa0166170 | Msa0537990 | 0.816222 | 6.180632e-52 | -8.615850e-47 |
| Msa0170070 | Msa0537990 | 0.822675 | 2.086947e-53 | -8.615850e-47 |
| Msa0172590 | Msa0537990 | 0.827129 | 1.855317e-54 | -8.615850e-47 |
| Msa0195440 | Msa0537990 | 0.829880 | 4.018527e-55 | -8.615850e-47 |
| Msa0218020 | Msa0537990 | 0.827008 | 1.982823e-54 | -8.615850e-47 |
| Msa0373170 | Msa0537990 | 0.859847 | 3.115215e-63 | -8.615850e-47 |
| Msa0373590 | Msa0537990 | 0.800349 | 1.502754e-48 | -8.615850e-47 |
| Msa0380710 | Msa0537990 | 0.829722 | 4.391821e-55 | -8.615850e-47 |
| Msa0381730 | Msa0537990 | 0.806601 | 7.600912e-50 | -8.615850e-47 |
| Msa0382740 | Msa0537990 | 0.817433 | 3.305983e-52 | -8.615850e-47 |
| Msa0382770 | Msa0537990 | 0.819877 | 9.218589e-53 | -8.615850e-47 |
| Msa0383000 | Msa0537990 | 0.811910 | 5.526917e-51 | -8.615850e-47 |
| Msa0389950 | Msa0537990 | 0.810408 | 1.169801e-50 | -8.615850e-47 |
| Msa0404770 | Msa0537990 | 0.833452 | 5.289821e-56 | -8.615850e-47 |
| Msa0415140 | Msa0537990 | 0.812359 | 4.412181e-51 | -8.615850e-47 |
| Msa0415820 | Msa0537990 | 0.834412 | 3.042240e-56 | -8.615850e-47 |
| Msa0420670 | Msa0537990 | 0.807552 | 4.780428e-50 | -8.615850e-47 |
| Msa0421130 | Msa0537990 | 0.802553 | 5.312961e-49 | -8.615850e-47 |
| Msa0421750 | Msa0537990 | 0.842852 | 2.007057e-58 | -8.615850e-47 |
| Msa0422050 | Msa0537990 | 0.807544 | 4.799410e-50 | -8.615850e-47 |
| Msa0430480 | Msa0537990 | 0.808722 | 2.693232e-50 | -8.615850e-47 |
| Msa0431200 | Msa0537990 | 0.825147 | 5.493917e-54 | -8.615850e-47 |
| Msa0433150 | Msa0537990 | 0.818117 | 2.317594e-52 | -8.615850e-47 |
| Msa0460640 | Msa0537990 | 0.811631 | 6.355554e-51 | -8.615850e-47 |
| Msa0466520 | Msa0537990 | 0.803471 | 3.431279e-49 | -8.615850e-47 |
| Msa0466880 | Msa0537990 | 0.811602 | 6.448148e-51 | -8.615850e-47 |
| Msa0467690 | Msa0537990 | 0.856752 | 2.601393e-62 | -8.615850e-47 |
| Msa0468700 | Msa0537990 | 0.802332 | 5.899137e-49 | -8.615850e-47 |
| Msa0476280 | Msa0537990 | 0.824732 | 6.882759e-54 | -8.615850e-47 |
| Msa0281540 | Msa0537990 | 0.801241 | 9.878912e-49 | -8.615850e-47 |
| Msa0320580 | Msa0537990 | 0.820534 | 6.520772e-53 | -8.615850e-47 |
| Msa0344110 | Msa0537990 | 0.819330 | 1.229059e-52 | -8.615850e-47 |
| Msa0483910 | Msa0537990 | 0.828757 | 7.528894e-55 | -8.615850e-47 |
| Msa0500450 | Msa0537990 | 0.811367 | 7.252533e-51 | -8.615850e-47 |
| Msa0503990 | Msa0537990 | 0.815578 | 8.603630e-52 | -8.615850e-47 |
| Msa0506880 | Msa0537990 | 0.829687 | 4.476808e-55 | -8.615850e-47 |
| Msa0507810 | Msa0537990 | 0.825460 | 4.632619e-54 | -8.615850e-47 |
| Msa0507820 | Msa0537990 | 0.804804 | 1.812083e-49 | -8.615850e-47 |
| Msa0507920 | Msa0537990 | 0.841653 | 4.169585e-58 | -8.615850e-47 |
| Msa0512530 | Msa0537990 | 0.805624 | 1.219981e-49 | -8.615850e-47 |
| Msa0513080 | Msa0537990 | 0.803475 | 3.425651e-49 | -8.615850e-47 |
| Msa0513560 | Msa0537990 | 0.804317 | 2.289672e-49 | -8.615850e-47 |
| Msa0514020 | Msa0537990 | 0.845387 | 4.191497e-59 | -8.615850e-47 |
| Msa0514580 | Msa0537990 | 0.805207 | 1.492127e-49 | -8.615850e-47 |
| Msa0520260 | Msa0537990 | 0.818576 | 1.823763e-52 | -8.615850e-47 |
| Msa0520870 | Msa0537990 | 0.832811 | 7.636775e-56 | -8.615850e-47 |
| Msa0521320 | Msa0537990 | 0.808211 | 3.461362e-50 | -8.615850e-47 |
| Msa0524320 | Msa0537990 | 0.808331 | 3.264142e-50 | -8.615850e-47 |
| Msa0524430 | Msa0537990 | 0.808748 | 2.658750e-50 | -8.615850e-47 |
| Msa0524520 | Msa0537990 | 0.819312 | 1.240830e-52 | -8.615850e-47 |
| Msa0524800 | Msa0537990 | 0.820872 | 5.453289e-53 | -8.615850e-47 |
| Msa0525000 | Msa0537990 | 0.818557 | 1.842446e-52 | -8.615850e-47 |
| Msa0527850 | Msa0537990 | 0.819981 | 8.728940e-53 | -8.615850e-47 |
| Msa0534100 | Msa0537990 | 0.807017 | 6.205720e-50 | -8.615850e-47 |
| Msa0537990 | Msa0550590 | 0.821749 | 3.421064e-53 | -8.615850e-47 |
| Msa0537990 | Msa0554300 | 0.826888 | 2.118483e-54 | -8.615850e-47 |
| Msa0537990 | Msa0561560 | 0.847718 | 9.686220e-60 | -8.615850e-47 |
| Msa0537990 | Msa0563940 | 0.829256 | 5.698023e-55 | -8.615850e-47 |
| Msa0537990 | Msa0571620 | 0.801053 | 1.079599e-48 | -8.615850e-47 |
| Msa0537990 | Msa0572830 | 0.835777 | 1.377417e-56 | -8.615850e-47 |
| Msa0537990 | Msa0573760 | 0.806081 | 9.780127e-50 | -8.615850e-47 |
| Msa0537990 | Msa0575710 | 0.802002 | 6.897477e-49 | -8.615850e-47 |
| Msa0537990 | Msa0580200 | 0.805626 | 1.218787e-49 | -8.615850e-47 |
| Msa0537990 | Msa0580940 | 0.808198 | 3.484994e-50 | -8.615850e-47 |
| Msa0537990 | Msa0582460 | 0.801308 | 9.574653e-49 | -8.615850e-47 |
| Msa0537990 | Msa0585340 | 0.964416 | 2.672115e-123 | -8.615850e-47 |
| Msa0537990 | Msa0586200 | 0.810368 | 1.193566e-50 | -8.615850e-47 |
| Msa0537990 | Msa0603980 | 0.818402 | 1.997033e-52 | -8.615850e-47 |
| Msa0537990 | Msa0606100 | 0.851802 | 6.997929e-61 | -8.615850e-47 |
| Msa0537990 | Msa0607800 | 0.808646 | 2.796392e-50 | -8.615850e-47 |
| Msa0537990 | Msa0608350 | 0.808671 | 2.761227e-50 | -8.615850e-47 |
| Msa0537990 | Msa0612520 | 0.811178 | 7.972018e-51 | -8.615850e-47 |
| Msa0537990 | Msa0615630 | 0.812528 | 4.051179e-51 | -8.615850e-47 |
| Msa0537990 | Msa0620500 | 0.816463 | 5.459921e-52 | -8.615850e-47 |
| Msa0537990 | Msa0621710 | 0.808926 | 2.436405e-50 | -8.615850e-47 |
| Msa0537990 | Msa0625340 | 0.901816 | 1.826363e-78 | -8.615850e-47 |
| Msa0537990 | Msa0625620 | 0.831872 | 1.304676e-55 | -8.615850e-47 |
| Msa0537990 | Msa0630660 | 0.813006 | 3.183749e-51 | -8.615850e-47 |
| Msa0537990 | Msa0647050 | 0.844150 | 9.032367e-59 | -8.615850e-47 |
| Msa0537990 | Msa0648760 | 0.817363 | 3.427556e-52 | -8.615850e-47 |
| Msa0537990 | Msa0654740 | 0.830362 | 3.064646e-55 | -8.615850e-47 |
| Msa0537990 | Msa0668900 | 0.830412 | 2.979406e-55 | -8.615850e-47 |
| Msa0537990 | Msa0687090 | 0.824653 | 7.181931e-54 | -8.615850e-47 |
| Msa0537990 | Msa0688380 | 0.805611 | 1.227739e-49 | -8.615850e-47 |
| Msa0537990 | Msa0688620 | 0.811865 | 5.652788e-51 | -8.615850e-47 |
| Msa0537990 | Msa0690740 | 0.804122 | 2.514120e-49 | -8.615850e-47 |
| Msa0537990 | Msa0691270 | 0.829667 | 4.529291e-55 | -8.615850e-47 |
| Msa0537990 | Msa0698730 | 0.844473 | 7.395988e-59 | -8.615850e-47 |
| Msa0537990 | Msa0700460 | 0.811108 | 8.256357e-51 | -8.615850e-47 |
| Msa0537990 | Msa0707260 | 0.833914 | 4.056005e-56 | -8.615850e-47 |
| Msa0537990 | Msa0711010 | 0.815785 | 7.738067e-52 | -8.615850e-47 |
| Msa0537990 | Msa0717900 | 0.824738 | 6.860194e-54 | -8.615850e-47 |
| Msa0537990 | Msa0718040 | 0.846315 | 2.345759e-59 | -8.615850e-47 |
| Msa0537990 | Msa0720280 | 0.816424 | 5.570345e-52 | -8.615850e-47 |
| Msa0537990 | Msa0747740 | 0.808961 | 2.393931e-50 | -8.615850e-47 |
| Msa0537990 | Msa0749190 | 0.811131 | 8.161189e-51 | -8.615850e-47 |
| Msa0537990 | Msa0750520 | 0.807717 | 4.410448e-50 | -8.615850e-47 |
| Msa0537990 | Msa0795060 | 0.808257 | 3.385087e-50 | -8.615850e-47 |
| Msa0537990 | Msa0798080 | 0.804846 | 1.775407e-49 | -8.615850e-47 |
| Msa0537990 | Msa0800660 | 0.824554 | 7.580507e-54 | -8.615850e-47 |
| Msa0537990 | Msa0803140 | 0.810430 | 1.157075e-50 | -8.615850e-47 |
| Msa0537990 | Msa0816080 | 0.811775 | 5.912951e-51 | -8.615850e-47 |
| Msa0537990 | Msa0821160 | 0.806382 | 8.451182e-50 | -8.615850e-47 |
| Msa0537990 | Msa0827420 | 0.823317 | 1.478483e-53 | -8.615850e-47 |
| Msa0537990 | Msa0831620 | 0.817980 | 2.488631e-52 | -8.615850e-47 |
| Msa0537990 | Msa0841500 | 0.811526 | 6.697861e-51 | -8.615850e-47 |
| Msa0537990 | Msa0900760 | 0.823179 | 1.592149e-53 | -8.615850e-47 |
| Msa0537990 | Msa0901150 | 0.847050 | 1.477951e-59 | -8.615850e-47 |
| Msa0537990 | Msa0909760 | 0.851086 | 1.115469e-60 | -8.615850e-47 |
| Msa0537990 | Msa0926080 | 0.805854 | 1.091662e-49 | -8.615850e-47 |
| Msa0537990 | Msa0966710 | 0.875723 | 2.460847e-68 | -8.615850e-47 |
| Msa0537990 | Msa1000970 | 0.868201 | 7.784767e-66 | -8.615850e-47 |
| Msa0537990 | Msa1003740 | 0.818391 | 2.008949e-52 | -8.615850e-47 |
| Msa0537990 | Msa1003800 | 0.823042 | 1.713927e-53 | -8.615850e-47 |
| Msa0537990 | Msa1003930 | 0.818817 | 1.608071e-52 | -8.615850e-47 |
| Msa0537990 | Msa1008670 | 0.812411 | 4.298024e-51 | -8.615850e-47 |
| Msa0537990 | Msa1008680 | 0.810089 | 1.370908e-50 | -8.615850e-47 |
| Msa0537990 | Msa1033920 | 0.814662 | 1.374604e-51 | -8.615850e-47 |
| Msa0537990 | Msa1034600 | 0.802502 | 5.443515e-49 | -8.615850e-47 |
| Msa0537990 | Msa1038190 | 0.845844 | 3.151952e-59 | -8.615850e-47 |
| Msa0537990 | Msa1060900 | 0.827596 | 1.434034e-54 | -8.615850e-47 |
| Msa0537990 | Msa1071410 | 0.809430 | 1.899272e-50 | -8.615850e-47 |
| Msa0537990 | Msa1076020 | 0.840499 | 8.381359e-58 | -8.615850e-47 |
| Msa0537990 | Msa1078880 | 0.840166 | 1.024288e-57 | -8.615850e-47 |
| Msa0537990 | Msa1078970 | 0.849297 | 3.540118e-60 | -8.615850e-47 |
| Msa0537990 | Msa1079640 | 0.809381 | 1.946036e-50 | -8.615850e-47 |
| Msa0537990 | Msa1082380 | 0.815306 | 9.891930e-52 | -8.615850e-47 |
| Msa0537990 | Msa1116190 | 0.801496 | 8.759199e-49 | -8.615850e-47 |
| Msa0537990 | Msa1116660 | 0.834349 | 3.154537e-56 | -8.615850e-47 |
| Msa0537990 | Msa1116740 | 0.829994 | 3.770512e-55 | -8.615850e-47 |
| Msa0537990 | Msa1124470 | 0.818495 | 1.903122e-52 | -8.615850e-47 |
| Msa0537990 | Msa1127280 | 0.809690 | 1.670152e-50 | -8.615850e-47 |
| Msa0537990 | Msa1129580 | 0.810353 | 1.202275e-50 | -8.615850e-47 |
| Msa0537990 | Msa1139050 | 0.829771 | 4.272137e-55 | -8.615850e-47 |
| Msa0537990 | Msa1162880 | 0.839542 | 1.489024e-57 | -8.615850e-47 |
| Msa0537990 | Msa1163180 | 0.827132 | 1.852303e-54 | -8.615850e-47 |
| Msa0537990 | Msa1165480 | 0.822544 | 2.238701e-53 | -8.615850e-47 |
| Msa0537990 | Msa1169190 | 0.847379 | 1.200694e-59 | -8.615850e-47 |
| Msa0537990 | Msa1171780 | 0.805742 | 1.152715e-49 | -8.615850e-47 |
| Msa0537990 | Msa1212700 | 0.841988 | 3.401100e-58 | -8.615850e-47 |
| Msa0537990 | Msa1212920 | 0.816811 | 4.561506e-52 | -8.615850e-47 |
| Msa0537990 | Msa1214350 | 0.808335 | 3.257469e-50 | -8.615850e-47 |
| Msa0537990 | Msa1215980 | 0.818158 | 2.268720e-52 | -8.615850e-47 |
| Msa0537990 | Msa1216090 | 0.808017 | 3.807550e-50 | -8.615850e-47 |
| Msa0537990 | Msa1216340 | 0.801982 | 6.962886e-49 | -8.615850e-47 |
| Msa0537990 | Msa1219770 | 0.817504 | 3.186501e-52 | -8.615850e-47 |
| Msa0537990 | Msa1220030 | 0.812778 | 3.571757e-51 | -8.615850e-47 |
| Msa0537990 | Msa1254420 | 0.822212 | 2.673463e-53 | -8.615850e-47 |
| Msa0537990 | Msa1254540 | 0.830013 | 3.730182e-55 | -8.615850e-47 |
| Msa0537990 | Msa1261050 | 0.810359 | 1.198630e-50 | -8.615850e-47 |
| Msa0537990 | Msa1262570 | 0.821030 | 5.012811e-53 | -8.615850e-47 |
| Msa0537990 | Msa1263740 | 0.814862 | 1.240981e-51 | -8.615850e-47 |
| Msa0537990 | Msa1263780 | 0.823993 | 1.026949e-53 | -8.615850e-47 |
| Msa0537990 | Msa1266300 | 0.825606 | 4.277871e-54 | -8.615850e-47 |
| Msa0537990 | Msa1266690 | 0.806796 | 6.912474e-50 | -8.615850e-47 |
| Msa0537990 | Msa1282260 | 0.809732 | 1.636108e-50 | -8.615850e-47 |
| Msa0537990 | Msa1294790 | 0.800474 | 1.416793e-48 | -8.615850e-47 |
| Msa0537990 | Msa1299980 | 0.843380 | 1.451749e-58 | -8.615850e-47 |
| Msa0537990 | Msa1300460 | 0.802579 | 5.246966e-49 | -8.615850e-47 |
| Msa0537990 | Msa1321530 | 0.803718 | 3.050137e-49 | -8.615850e-47 |
| Msa0537990 | Msa1331650 | 0.833898 | 4.092771e-56 | -8.615850e-47 |
| Msa0537990 | Msa1333360 | 0.807852 | 4.127331e-50 | -8.615850e-47 |
| Msa0537990 | Msa1339170 | 0.815862 | 7.437863e-52 | -8.615850e-47 |
| Msa0537990 | Msa1342810 | 0.835526 | 1.594118e-56 | -8.615850e-47 |
| Msa0537990 | Msa1361930 | 0.813685 | 2.258328e-51 | -8.615850e-47 |
| Msa0537990 | Msa1381800 | 0.806941 | 6.439580e-50 | -8.615850e-47 |
| Msa0537990 | Msa1383310 | 0.821007 | 5.075410e-53 | -8.615850e-47 |
| Msa0537990 | Msa1387500 | 0.812867 | 3.415388e-51 | -8.615850e-47 |
| Msa0537990 | Msa1389820 | 0.815347 | 9.687343e-52 | -8.615850e-47 |
| Msa0537990 | Msa1393560 | 0.830454 | 2.909696e-55 | -8.615850e-47 |
| Msa0537990 | Msa1401100 | 0.827206 | 1.777703e-54 | -8.615850e-47 |
| Msa0537990 | Msa1406720 | 0.807453 | 5.016502e-50 | -8.615850e-47 |
| Msa0537990 | Msa1408160 | 0.814160 | 1.774907e-51 | -8.615850e-47 |
| Msa0537990 | Msa1426110 | 0.831869 | 1.306988e-55 | -8.615850e-47 |
| Msa0537990 | Msa1426320 | 0.813242 | 2.825889e-51 | -8.615850e-47 |
| Msa0537990 | Msa1434640 | 0.810704 | 1.009811e-50 | -8.615850e-47 |
| Msa0537990 | Msa1442260 | 0.806845 | 6.750778e-50 | -8.615850e-47 |
| Msa0537990 | Msa1447170 | 0.815658 | 8.260019e-52 | -8.615850e-47 |
| Msa0537990 | Msa1448960 | 0.808126 | 3.610023e-50 | -8.615850e-47 |
| Msa0537990 | Msa1450190 | 0.815301 | 9.917504e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537990 | MtrunA17_Chr4g0000281 | 97.412 | 425 | 11 | 0 | 1 | 425 | 1 | 425 | 0.0 | 851 |
| Msa0537990 | MtrunA17_Chr8g0391071 | 39.571 | 326 | 163 | 13 | 115 | 424 | 254 | 561 | 2.22e-47 | 171 |
| Msa0537990 | MtrunA17_Chr7g0217181 | 34.557 | 327 | 186 | 12 | 122 | 424 | 422 | 744 | 1.73e-39 | 150 |
| Msa0537990 | MtrunA17_Chr8g0361681 | 28.963 | 328 | 208 | 7 | 121 | 425 | 511 | 836 | 9.37e-30 | 122 |
| Msa0537990 | MtrunA17_Chr5g0417111 | 30.861 | 337 | 177 | 12 | 121 | 425 | 597 | 909 | 1.51e-29 | 121 |
| Msa0537990 | MtrunA17_Chr6g0484451 | 41.346 | 208 | 105 | 6 | 115 | 320 | 300 | 492 | 5.53e-28 | 115 |
| Msa0537990 | MtrunA17_Chr8g0361691 | 42.045 | 88 | 43 | 2 | 194 | 277 | 11 | 94 | 8.42e-16 | 74.7 |
| Msa0537990 | MtrunA17_Chr6g0484461 | 43.333 | 90 | 47 | 3 | 337 | 424 | 1 | 88 | 1.78e-14 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537990 | AT3G20260.1 | 59.729 | 442 | 156 | 10 | 1 | 425 | 1 | 437 | 3.43e-156 | 449 |
| Msa0537990 | AT1G73850.2 | 36.446 | 332 | 179 | 10 | 115 | 424 | 312 | 633 | 2.37e-46 | 169 |
| Msa0537990 | AT1G73850.1 | 36.446 | 332 | 179 | 10 | 115 | 424 | 312 | 633 | 2.37e-46 | 169 |
| Msa0537990 | AT5G39785.1 | 31.024 | 332 | 197 | 5 | 125 | 425 | 276 | 606 | 1.59e-37 | 144 |
| Msa0537990 | AT5G39785.3 | 31.024 | 332 | 197 | 5 | 125 | 425 | 276 | 606 | 1.59e-37 | 144 |
| Msa0537990 | AT5G39785.5 | 31.024 | 332 | 197 | 5 | 125 | 425 | 276 | 606 | 1.59e-37 | 144 |
| Msa0537990 | AT5G39785.2 | 29.762 | 336 | 197 | 6 | 125 | 425 | 276 | 607 | 8.01e-36 | 139 |
| Msa0537990 | AT5G39785.4 | 29.412 | 357 | 195 | 8 | 125 | 425 | 276 | 631 | 3.89e-34 | 135 |
| Msa0537990 | AT1G69610.3 | 28.148 | 405 | 218 | 11 | 60 | 425 | 222 | 592 | 1.38e-30 | 124 |
| Msa0537990 | AT1G69610.2 | 28.109 | 402 | 222 | 11 | 60 | 425 | 267 | 637 | 1.64e-30 | 124 |
| Msa0537990 | AT1G69610.1 | 28.109 | 402 | 222 | 11 | 60 | 425 | 266 | 636 | 1.82e-30 | 124 |
| Msa0537990 | AT3G01175.1 | 27.536 | 345 | 182 | 11 | 119 | 424 | 260 | 575 | 1.63e-19 | 91.3 |
Find 129 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGAACTTCTTCATGCTTT+TGG | 0.162837 | 4_1:+17103706 | None:intergenic |
| GAAAATTCACCTCGTATATT+TGG | 0.166047 | 4_1:+17104699 | None:intergenic |
| AAATTAAAGAAACATGTTTA+TGG | 0.233628 | 4_1:-17103298 | None:intergenic |
| CTAGAGCGAGCATAAATTTC+AGG | 0.248869 | 4_1:+17104750 | None:intergenic |
| GTGCAGCATCTTAGTGAAAT+TGG | 0.249862 | 4_1:-17105632 | Msa0537990:CDS |
| TGTAATATTTGTGAGTTTCT+AGG | 0.255991 | 4_1:-17103410 | Msa0537990:three_prime_UTR |
| TGTTCACTCTCTCTCTTCAT+AGG | 0.265647 | 4_1:-17107268 | Msa0537990:five_prime_UTR |
| TCTTTATGTTATGAATGTTT+AGG | 0.270816 | 4_1:-17103508 | Msa0537990:three_prime_UTR |
| CAAAGCCTCGCCACCATTGC+TGG | 0.272542 | 4_1:+17105708 | None:intergenic |
| GCAGGAGTTTCAACAATTTC+AGG | 0.274624 | 4_1:-17104823 | Msa0537990:CDS |
| GTAGTATTGGGCTGTGGCTT+AGG | 0.278993 | 4_1:-17106096 | Msa0537990:five_prime_UTR |
| AATCTAAGCTAAGCTAAGTT+AGG | 0.286315 | 4_1:-17107058 | Msa0537990:five_prime_UTR |
| CACTTTGCCTAAACTACTTC+AGG | 0.289828 | 4_1:-17104724 | Msa0537990:CDS |
| AACTTGATTTATCAAATAAT+AGG | 0.293589 | 4_1:-17103584 | Msa0537990:CDS |
| TAATAGCATTAATGTAATAA+TGG | 0.308018 | 4_1:+17107235 | None:intergenic |
| TTCTTGCTCCAGATCTTATC+AGG | 0.311925 | 4_1:-17104479 | Msa0537990:CDS |
| TAGTGTAACGAAGATCATTA+TGG | 0.317080 | 4_1:-17103367 | Msa0537990:three_prime_UTR |
| CTTTATGTTATGAATGTTTA+GGG | 0.324903 | 4_1:-17103507 | Msa0537990:three_prime_UTR |
| TAACTTAGCTTAGCTTAGAT+TGG | 0.325718 | 4_1:+17107060 | None:intergenic |
| TGACTAGAGAACAGCTGTTT+TGG | 0.334597 | 4_1:-17103626 | Msa0537990:CDS |
| TCGAGACATGAATCTTCTTC+AGG | 0.336685 | 4_1:+17105800 | None:intergenic |
| CTTGTGATTTAGTCTATGTT+TGG | 0.337252 | 4_1:-17103322 | Msa0537990:three_prime_UTR |
| AGCTTCTTTGATGTAGATCT+TGG | 0.341971 | 4_1:+17105065 | None:intergenic |
| TCCACATCCCTCCATTCATT+TGG | 0.357529 | 4_1:+17105740 | None:intergenic |
| TCATTATGGATTACTCTTGT+TGG | 0.369108 | 4_1:-17103353 | Msa0537990:three_prime_UTR |
| GGCTTTGATTCCTCAGGCTC+AGG | 0.371626 | 4_1:+17105962 | None:intergenic |
| TCAATTATCCTGATAAGATC+TGG | 0.392578 | 4_1:+17104471 | None:intergenic |
| TCAAGCGTTATCAACCTGTT+TGG | 0.398641 | 4_1:-17104399 | Msa0537990:CDS |
| GCTGATTCTGATTTCCAAAC+AGG | 0.399869 | 4_1:+17104385 | None:intergenic |
| GAGCCTCCTCTTTACCTCAT+TGG | 0.400140 | 4_1:+17105859 | None:intergenic |
| GCTTGAAAATATTCCCTACT+TGG | 0.408160 | 4_1:-17104970 | Msa0537990:CDS |
| GAAGAGGAAGAGGGAGAGAC+AGG | 0.409837 | 4_1:-17105764 | Msa0537990:CDS |
| TTTGGAACCTGAAGTAGTTT+AGG | 0.411769 | 4_1:+17104717 | None:intergenic |
| ATAATCTTCTCTCTTATTCA+AGG | 0.416061 | 4_1:-17106992 | Msa0537990:intron |
| CCTTTCGTTTATTCCTGAAA+AGG | 0.417058 | 4_1:-17104434 | Msa0537990:CDS |
| TAGTATTGGGCTGTGGCTTA+GGG | 0.421544 | 4_1:-17106095 | Msa0537990:five_prime_UTR |
| GATAATACAGTATGAGGAAA+AGG | 0.436537 | 4_1:+17107027 | None:intergenic |
| AGGGGAGGATGAAGAGGAAG+AGG | 0.437173 | 4_1:-17105774 | Msa0537990:CDS |
| GGTCGAGGGCCCTGCTCAAA+AGG | 0.439174 | 4_1:+17104771 | None:intergenic |
| TTGACGCGAAAATCTTATCA+AGG | 0.439867 | 4_1:-17103668 | Msa0537990:CDS |
| GATGAAGATAATACAGTATG+AGG | 0.442165 | 4_1:+17107021 | None:intergenic |
| CTGCGCACTACGGCTGTAAC+AGG | 0.442848 | 4_1:+17104842 | None:intergenic |
| CTTTCGTTTATTCCTGAAAA+GGG | 0.442892 | 4_1:-17104433 | Msa0537990:CDS |
| GTGTTGGGCTTTGATTCCTC+AGG | 0.443162 | 4_1:+17105956 | None:intergenic |
| ATATGAGTTATAAGATATCT+TGG | 0.448492 | 4_1:-17104881 | Msa0537990:CDS |
| AAAGGTGAGGTGGTAAAGCA+TGG | 0.463682 | 4_1:-17106059 | Msa0537990:exon |
| TACTGTATTATCTTCATCAA+TGG | 0.469957 | 4_1:-17107016 | Msa0537990:five_prime_UTR |
| GAATGTTTAGGGAAGGTTTG+TGG | 0.470158 | 4_1:-17103496 | Msa0537990:three_prime_UTR |
| CATCTTAGTGAAATTGGAAA+AGG | 0.480151 | 4_1:-17105626 | Msa0537990:intron |
| TCCCTACTTGGATATTGAAA+CGG | 0.481023 | 4_1:-17104958 | Msa0537990:CDS |
| AGGAGCTAAGGAAGAAGGGT+TGG | 0.486945 | 4_1:-17103746 | Msa0537990:CDS |
| ATCTAAGCTAAGCTAAGTTA+GGG | 0.488915 | 4_1:-17107057 | Msa0537990:five_prime_UTR |
| GCTCGCCACTCCTCTACAAC+AGG | 0.491100 | 4_1:-17104364 | Msa0537990:CDS |
| GGGGAGGATGAAGAGGAAGA+GGG | 0.491674 | 4_1:-17105773 | Msa0537990:CDS |
| GATTAGCAAGGGAATAGAAT+GGG | 0.491816 | 4_1:+17103543 | None:intergenic |
| GAAGAAGTTCAACTATTGCT+TGG | 0.493712 | 4_1:-17103696 | Msa0537990:CDS |
| AGAAGCTGGCATCTCCCCTT+CGG | 0.493948 | 4_1:-17105049 | Msa0537990:CDS |
| TTATTACCAATGAGGTAAAG+AGG | 0.499834 | 4_1:-17105865 | Msa0537990:CDS |
| CGAGCATAAATTTCAGGTCG+AGG | 0.501283 | 4_1:+17104756 | None:intergenic |
| AGATGTTCAGTCTCATCATC+AGG | 0.502631 | 4_1:+17104999 | None:intergenic |
| TGATCAGGACCACCAGTGTT+GGG | 0.502702 | 4_1:+17105941 | None:intergenic |
| GAGAGACAGGACCAAATGAA+TGG | 0.508991 | 4_1:-17105751 | Msa0537990:CDS |
| TTTGATGTAGATCTTGGAGA+TGG | 0.515789 | 4_1:+17105071 | None:intergenic |
| CTGAAATTTATGCTCGCTCT+AGG | 0.518886 | 4_1:-17104749 | Msa0537990:CDS |
| TCAGGAATAAACGAAAGGTA+AGG | 0.521078 | 4_1:+17104439 | None:intergenic |
| TGAACAGAAACAGAAAGAGT+AGG | 0.524466 | 4_1:+17107285 | None:intergenic |
| GCTTAGCTTAGATTGGAGCT+TGG | 0.527021 | 4_1:+17107067 | None:intergenic |
| TAGGTCAAATATGCTTGACT+TGG | 0.527289 | 4_1:-17104929 | Msa0537990:CDS |
| TATCAAATAATAGGTTAGAG+AGG | 0.528363 | 4_1:-17103575 | Msa0537990:CDS |
| ACTGAAGGAGCTAAGGAAGA+AGG | 0.531349 | 4_1:-17103751 | Msa0537990:CDS |
| GAAGATTCATGTCTCGAGGA+AGG | 0.531829 | 4_1:-17105794 | Msa0537990:CDS |
| ATCAAATAATAGGTTAGAGA+GGG | 0.533791 | 4_1:-17103574 | Msa0537990:CDS |
| AGGCAGAAGGCCAGCAATGG+TGG | 0.534428 | 4_1:-17105718 | Msa0537990:CDS |
| CGAGGAAGGGGAGGATGAAG+AGG | 0.537283 | 4_1:-17105780 | Msa0537990:CDS |
| TGATTAGCAAGGGAATAGAA+TGG | 0.538025 | 4_1:+17103542 | None:intergenic |
| GAACAGAAACAGAAAGAGTA+GGG | 0.538194 | 4_1:+17107286 | None:intergenic |
| AGATTCATGTCTCGAGGAAG+GGG | 0.539571 | 4_1:-17105792 | Msa0537990:CDS |
| CTAAAGACTGTGATTAGCAA+GGG | 0.541390 | 4_1:+17103532 | None:intergenic |
| AAGATCTACATCAAAGAAGC+TGG | 0.541693 | 4_1:-17105063 | Msa0537990:CDS |
| TTTAGGAAATCTCAGAAAGC+AGG | 0.542506 | 4_1:-17106016 | Msa0537990:CDS |
| GACAGGACCAAATGAATGGA+GGG | 0.543843 | 4_1:-17105747 | Msa0537990:CDS |
| GATATTGAAACGGCATATGT+AGG | 0.544289 | 4_1:-17104948 | Msa0537990:CDS |
| CTGATCAGGACCACCAGTGT+TGG | 0.545402 | 4_1:+17105940 | None:intergenic |
| AAAGAATGTTATTCTTTGAT+CGG | 0.546997 | 4_1:-17105661 | Msa0537990:CDS |
| AAGATTCATGTCTCGAGGAA+GGG | 0.547261 | 4_1:-17105793 | Msa0537990:CDS |
| GGATTATGTATGAGTATGAC+AGG | 0.548407 | 4_1:-17103475 | Msa0537990:three_prime_UTR |
| TGCCGTTTCAATATCCAAGT+AGG | 0.551085 | 4_1:+17104956 | None:intergenic |
| GTAGACTGAACCTGTTGTAG+AGG | 0.552512 | 4_1:+17104354 | None:intergenic |
| TGACGCGAAAATCTTATCAA+GGG | 0.554727 | 4_1:-17103667 | Msa0537990:CDS |
| CAAGGGTTCTAAGAATGACT+AGG | 0.556783 | 4_1:-17103650 | Msa0537990:CDS |
| AATTTCAGGTTCTATTGCAA+AGG | 0.557900 | 4_1:-17104809 | Msa0537990:CDS |
| ACCAAATGAATGGAGGGATG+TGG | 0.560503 | 4_1:-17105741 | Msa0537990:CDS |
| GCCGTTTCAATATCCAAGTA+GGG | 0.561156 | 4_1:+17104957 | None:intergenic |
| ATGTTATGAATGTTTAGGGA+AGG | 0.562192 | 4_1:-17103503 | Msa0537990:three_prime_UTR |
| CTGTTACAGCCGTAGTGCGC+AGG | 0.568099 | 4_1:-17104841 | Msa0537990:CDS |
| TTTCAAGGAAAGACACCGAA+GGG | 0.568486 | 4_1:+17105034 | None:intergenic |
| TGGAGGGATGTGGAGGCAGA+AGG | 0.569588 | 4_1:-17105731 | Msa0537990:CDS |
| TGGTGAAACTGAAGGAGCTA+AGG | 0.574266 | 4_1:-17103758 | Msa0537990:CDS |
| TCGTCGTACGCTCAGATCAG+AGG | 0.577566 | 4_1:+17107318 | None:intergenic |
| ACTAAAGACTGTGATTAGCA+AGG | 0.583558 | 4_1:+17103531 | None:intergenic |
| CTGAAGGAGCTAAGGAAGAA+GGG | 0.591588 | 4_1:-17103750 | Msa0537990:CDS |
| TCAAATATGCTTGACTTGGG+AGG | 0.593392 | 4_1:-17104925 | Msa0537990:CDS |
| GAAGGCCAGCAATGGTGGCG+AGG | 0.595275 | 4_1:-17105713 | Msa0537990:CDS |
| GAAATCTCAGAAAGCAGGTG+TGG | 0.595844 | 4_1:-17106011 | Msa0537990:CDS |
| GTTGAAACTCCTGCGCACTA+CGG | 0.598745 | 4_1:+17104832 | None:intergenic |
| CAAGGGAATAGAATGGGGCA+TGG | 0.602619 | 4_1:+17103549 | None:intergenic |
| CGATTCTTGTGCTGATGCTG+AGG | 0.602958 | 4_1:-17105900 | Msa0537990:CDS |
| CAAGGCAGTGCCTGAGCCTG+AGG | 0.607834 | 4_1:-17105972 | Msa0537990:CDS |
| TGAGGTAAAGAGGAGGCTCA+AGG | 0.611185 | 4_1:-17105855 | Msa0537990:CDS |
| TGGAGGCAGAAGGCCAGCAA+TGG | 0.611341 | 4_1:-17105721 | Msa0537990:CDS |
| GAGGAATCAAAGCCCAACAC+TGG | 0.613144 | 4_1:-17105953 | Msa0537990:CDS |
| AGGTCAAATATGCTTGACTT+GGG | 0.614670 | 4_1:-17104928 | Msa0537990:CDS |
| GAGCATAAATTTCAGGTCGA+GGG | 0.615669 | 4_1:+17104757 | None:intergenic |
| AAATGAATGGAGGGATGTGG+AGG | 0.617932 | 4_1:-17105738 | Msa0537990:CDS |
| AGACAGGACCAAATGAATGG+AGG | 0.620870 | 4_1:-17105748 | Msa0537990:CDS |
| TTCATGTCTCGAGGAAGGGG+AGG | 0.621507 | 4_1:-17105789 | Msa0537990:CDS |
| GGTTCAGTCTACTCTTGAGA+AGG | 0.623341 | 4_1:-17104343 | Msa0537990:intron |
| CTGAACCTGTTGTAGAGGAG+TGG | 0.623679 | 4_1:+17104359 | None:intergenic |
| GAATCAAAGCCCAACACTGG+TGG | 0.626423 | 4_1:-17105950 | Msa0537990:CDS |
| TGAAGAAGATTCATGTCTCG+AGG | 0.629329 | 4_1:-17105798 | Msa0537990:CDS |
| GCAGAAAGTGGTGAAACTGA+AGG | 0.636231 | 4_1:-17103766 | Msa0537990:intron |
| GAGTGAAGTGAAGTGAAGTG+AGG | 0.641007 | 4_1:+17107091 | None:intergenic |
| GAGTATGACAGGGCATAGCA+AGG | 0.648243 | 4_1:-17103464 | Msa0537990:three_prime_UTR |
| GCACTACGGCTGTAACAGGT+AGG | 0.666438 | 4_1:+17104846 | None:intergenic |
| ATTAGCAAGGGAATAGAATG+GGG | 0.668816 | 4_1:+17103544 | None:intergenic |
| TTCAAGGAAAGACACCGAAG+GGG | 0.675812 | 4_1:+17105035 | None:intergenic |
| CTTCAGGTTCCAAATATACG+AGG | 0.690819 | 4_1:-17104708 | Msa0537990:intron |
| TTACCAATGAGGTAAAGAGG+AGG | 0.699801 | 4_1:-17105862 | Msa0537990:CDS |
| GATTATGTATGAGTATGACA+GGG | 0.806351 | 4_1:-17103474 | Msa0537990:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTTAAAACATAAAAAAA+TGG | + | chr4_1:17103449-17103468 | None:intergenic | 10.0% |
| !!! | TTTTGAAGATTAAAAAATTT+AGG | - | chr4_1:17104604-17104623 | Msa0537990:intron | 10.0% |
| !! | ATTTAGTATAAAAGAAATAT+TGG | - | chr4_1:17106013-17106032 | Msa0537990:CDS | 10.0% |
| !! | TAATAGCATTAATGTAATAA+TGG | + | chr4_1:17103405-17103424 | None:intergenic | 15.0% |
| !!! | TTTTTTGTTTTTTTTGTTTC+AGG | - | chr4_1:17103943-17103962 | Msa0537990:intron | 15.0% |
| !!! | ATCTAATTTTTTTGTAGTAT+TGG | - | chr4_1:17104528-17104547 | Msa0537990:intron | 15.0% |
| !!! | TCTAATTTTTTTGTAGTATT+GGG | - | chr4_1:17104529-17104548 | Msa0537990:intron | 15.0% |
| !! | TCAATTTATTAATAACTTTG+AGG | - | chr4_1:17105263-17105282 | Msa0537990:intron | 15.0% |
| !! | TTTATCAAATGTGTTATATT+TGG | - | chr4_1:17105397-17105416 | Msa0537990:intron | 15.0% |
| !! | ATAATATAAAATTCCAAAGT+TGG | + | chr4_1:17106346-17106365 | None:intergenic | 15.0% |
| !! | AACTTGATTTATCAAATAAT+AGG | - | chr4_1:17107053-17107072 | Msa0537990:five_prime_UTR | 15.0% |
| !! | GTTAAAACATAAAAAAATGG+TGG | + | chr4_1:17103446-17103465 | None:intergenic | 20.0% |
| !!! | TTTCTTTTTCTTTCTTTCAT+TGG | - | chr4_1:17103467-17103486 | Msa0537990:three_prime_UTR | 20.0% |
| !!! | TTCTTTTTCTTTCTTTCATT+GGG | - | chr4_1:17103468-17103487 | Msa0537990:three_prime_UTR | 20.0% |
| !! | ATTCCAAAAAGAAAAGATAA+TGG | + | chr4_1:17103871-17103890 | None:intergenic | 20.0% |
| !! | TGATCTATATCAATTTGAAA+GGG | - | chr4_1:17104001-17104020 | Msa0537990:intron | 20.0% |
| !! | ACATACATAGTTTCTATTAT+GGG | + | chr4_1:17104247-17104266 | None:intergenic | 20.0% |
| !! | AAAGAATGTTATTCTTTGAT+CGG | - | chr4_1:17104976-17104995 | Msa0537990:CDS | 20.0% |
| !! | ACTTAAAAGATCTAAATATG+GGG | + | chr4_1:17105116-17105135 | None:intergenic | 20.0% |
| !! | CACTTAAAAGATCTAAATAT+GGG | + | chr4_1:17105117-17105136 | None:intergenic | 20.0% |
| !! | ACACTTAAAAGATCTAAATA+TGG | + | chr4_1:17105118-17105137 | None:intergenic | 20.0% |
| !! | AAAATCAAACTCTAATTGAT+AGG | + | chr4_1:17105149-17105168 | None:intergenic | 20.0% |
| !! | TAATAAATTGAAATGAATCC+AGG | + | chr4_1:17105254-17105273 | None:intergenic | 20.0% |
| !!! | TTATTAATAACTTTGAGGAT+AGG | - | chr4_1:17105268-17105287 | Msa0537990:intron | 20.0% |
| !! | AATTAAAATCAGGATTATGT+TGG | + | chr4_1:17105319-17105338 | None:intergenic | 20.0% |
| !!! | AACATAATCCTGATTTTAAT+TGG | - | chr4_1:17105318-17105337 | Msa0537990:intron | 20.0% |
| !! | ATTATGAGATTTGATAAATG+TGG | + | chr4_1:17105503-17105522 | None:intergenic | 20.0% |
| !! | ATATGAGTTATAAGATATCT+TGG | - | chr4_1:17105756-17105775 | Msa0537990:CDS | 20.0% |
| !!! | CTTTTATACTAAATAACTTC+AGG | + | chr4_1:17106007-17106026 | None:intergenic | 20.0% |
| !!! | TGCTATATGATTAACTTTTA+AGG | - | chr4_1:17106460-17106479 | Msa0537990:intron | 20.0% |
| !! | AGCAAATATATGTTAACTAT+TGG | - | chr4_1:17106550-17106569 | Msa0537990:intron | 20.0% |
| !! | CATAAAACTTTAGATCATAT+GGG | + | chr4_1:17106697-17106716 | None:intergenic | 20.0% |
| !! | AACAATAGAAAAGTAAATTC+TGG | + | chr4_1:17106748-17106767 | None:intergenic | 20.0% |
| !! | TCTTTATGTTATGAATGTTT+AGG | - | chr4_1:17107129-17107148 | Msa0537990:five_prime_UTR | 20.0% |
| !! | CTTTATGTTATGAATGTTTA+GGG | - | chr4_1:17107130-17107149 | Msa0537990:five_prime_UTR | 20.0% |
| ! | TACTGTATTATCTTCATCAA+TGG | - | chr4_1:17103621-17103640 | Msa0537990:CDS | 25.0% |
| ! | ATAATCTTCTCTCTTATTCA+AGG | - | chr4_1:17103645-17103664 | Msa0537990:CDS | 25.0% |
| ! | AAAATGAAAATGGGAAAGAA+AGG | + | chr4_1:17103685-17103704 | None:intergenic | 25.0% |
| !! | GTGAATCAATTTAAAGCAAA+AGG | + | chr4_1:17103727-17103746 | None:intergenic | 25.0% |
| !! | AGTCCATTATCTTTTCTTTT+TGG | - | chr4_1:17103865-17103884 | Msa0537990:intron | 25.0% |
| !! | TGAATCTACTTTCTTTTAAG+AGG | - | chr4_1:17103890-17103909 | Msa0537990:intron | 25.0% |
| ! | GTGATCTATATCAATTTGAA+AGG | - | chr4_1:17104000-17104019 | Msa0537990:intron | 25.0% |
| ! | GACATACATAGTTTCTATTA+TGG | + | chr4_1:17104248-17104267 | None:intergenic | 25.0% |
| !!! | CAATCTTTTAACTTGATGAA+AGG | + | chr4_1:17104346-17104365 | None:intergenic | 25.0% |
| ! | ACTGTCTATTAGTATTACTT+TGG | - | chr4_1:17104447-17104466 | Msa0537990:CDS | 25.0% |
| !!! | TAGGGTAGTTTGTTTTTTAA+AGG | - | chr4_1:17104560-17104579 | Msa0537990:intron | 25.0% |
| !!! | TAGTTTGTTTTTTAAAGGTG+AGG | - | chr4_1:17104565-17104584 | Msa0537990:intron | 25.0% |
| !! | ATTGAGAAGAAACAGTTTTA+TGG | - | chr4_1:17104806-17104825 | Msa0537990:CDS | 25.0% |
| !!! | CTGATTTTAATTGGAGTTAA+GGG | - | chr4_1:17105327-17105346 | Msa0537990:intron | 25.0% |
| ! | ACTGACATTATATTCAGATT+AGG | + | chr4_1:17105378-17105397 | None:intergenic | 25.0% |
| ! | CTTTCCTTGAAAAAATTTGA+AGG | - | chr4_1:17105614-17105633 | Msa0537990:intron | 25.0% |
| ! | AAATTATCTAAACCCATATG+TGG | - | chr4_1:17105964-17105983 | Msa0537990:CDS | 25.0% |
| ! | TAAGTGTTTAAGCTAATGAA+TGG | - | chr4_1:17106090-17106109 | Msa0537990:five_prime_UTR | 25.0% |
| ! | CATATTAAAGAAGAACCATT+TGG | + | chr4_1:17106492-17106511 | None:intergenic | 25.0% |
| !! | TAACTATTGGTTATACTTTG+AGG | - | chr4_1:17106563-17106582 | Msa0537990:intron | 25.0% |
| !!! | TGTTTTGACGAAATAGAATT+AGG | - | chr4_1:17106647-17106666 | Msa0537990:intron | 25.0% |
| ! | GCATAAAACTTTAGATCATA+TGG | + | chr4_1:17106698-17106717 | None:intergenic | 25.0% |
| ! | TCTATTGTTAAAGATGAAGT+TGG | - | chr4_1:17106759-17106778 | Msa0537990:intron | 25.0% |
| ! | TTTCATTTAAATGCAGAAAG+TGG | - | chr4_1:17106859-17106878 | Msa0537990:intron | 25.0% |
| ! | TATCAAATAATAGGTTAGAG+AGG | - | chr4_1:17107062-17107081 | Msa0537990:five_prime_UTR | 25.0% |
| ! | ATCAAATAATAGGTTAGAGA+GGG | - | chr4_1:17107063-17107082 | Msa0537990:five_prime_UTR | 25.0% |
| ! | TGTAATATTTGTGAGTTTCT+AGG | - | chr4_1:17107227-17107246 | Msa0537990:five_prime_UTR | 25.0% |
| TAACTTAGCTTAGCTTAGAT+TGG | + | chr4_1:17103580-17103599 | None:intergenic | 30.0% | |
| AATCTAAGCTAAGCTAAGTT+AGG | - | chr4_1:17103579-17103598 | Msa0537990:CDS | 30.0% | |
| ATCTAAGCTAAGCTAAGTTA+GGG | - | chr4_1:17103580-17103599 | Msa0537990:CDS | 30.0% | |
| GATAATACAGTATGAGGAAA+AGG | + | chr4_1:17103613-17103632 | None:intergenic | 30.0% | |
| GATGAAGATAATACAGTATG+AGG | + | chr4_1:17103619-17103638 | None:intergenic | 30.0% | |
| !! | TGTTTGATTTTGTCTACCTT+TGG | + | chr4_1:17103841-17103860 | None:intergenic | 30.0% |
| TTTCCATGAGGGTTATTATT+AGG | - | chr4_1:17104029-17104048 | Msa0537990:intron | 30.0% | |
| ! | GTTATTATTAGGCTCTGATA+TGG | - | chr4_1:17104040-17104059 | Msa0537990:intron | 30.0% |
| ! | AAGTCCTATCTTTTCTTTGT+GGG | + | chr4_1:17104158-17104177 | None:intergenic | 30.0% |
| ! | AAAGTCCTATCTTTTCTTTG+TGG | + | chr4_1:17104159-17104178 | None:intergenic | 30.0% |
| TGATGATTAGTGTGATCTAA+TGG | + | chr4_1:17104280-17104299 | None:intergenic | 30.0% | |
| TCATCACTAATGTCTTGTAA+TGG | - | chr4_1:17104294-17104313 | Msa0537990:intron | 30.0% | |
| !!! | AATGGAAGCTGCTTTATTTT+TGG | - | chr4_1:17104312-17104331 | Msa0537990:intron | 30.0% |
| !!! | CTGCTTTATTTTTGGCTTTT+AGG | - | chr4_1:17104320-17104339 | Msa0537990:intron | 30.0% |
| GTTAAGCAAAAACTCTTTGT+TGG | - | chr4_1:17104406-17104425 | Msa0537990:CDS | 30.0% | |
| !!! | TTCTGTTTTGATGTGATTGT+AGG | - | chr4_1:17104500-17104519 | Msa0537990:CDS | 30.0% |
| !!! | TTTGTTTTTTAAAGGTGAGG+TGG | - | chr4_1:17104568-17104587 | Msa0537990:intron | 30.0% |
| ! | CGATGATTTTATTACCAATG+AGG | - | chr4_1:17104764-17104783 | Msa0537990:CDS | 30.0% |
| TTATTACCAATGAGGTAAAG+AGG | - | chr4_1:17104772-17104791 | Msa0537990:CDS | 30.0% | |
| CATCTTAGTGAAATTGGAAA+AGG | - | chr4_1:17105011-17105030 | Msa0537990:CDS | 30.0% | |
| !!! | TTAGCTCTTGCTTCTTTTTT+AGG | - | chr4_1:17105042-17105061 | Msa0537990:CDS | 30.0% |
| !!! | TGCTTCTTTTTTAGGTGAAA+CGG | - | chr4_1:17105050-17105069 | Msa0537990:CDS | 30.0% |
| CCTTAACTCCAATTAAAATC+AGG | + | chr4_1:17105329-17105348 | None:intergenic | 30.0% | |
| !!! | CCTGATTTTAATTGGAGTTA+AGG | - | chr4_1:17105326-17105345 | Msa0537990:intron | 30.0% |
| ! | TAGTACATTTTGTTAGCAAC+AGG | + | chr4_1:17105463-17105482 | None:intergenic | 30.0% |
| !!! | AGGTCCTTCAAATTTTTTCA+AGG | + | chr4_1:17105621-17105640 | None:intergenic | 30.0% |
| !! | AATTTCAGGTTCTATTGCAA+AGG | - | chr4_1:17105828-17105847 | Msa0537990:CDS | 30.0% |
| GAAAATTCACCTCGTATATT+TGG | + | chr4_1:17105941-17105960 | None:intergenic | 30.0% | |
| ! | TTAAGCTAATGAATGGATTC+AGG | - | chr4_1:17106097-17106116 | Msa0537990:five_prime_UTR | 30.0% |
| TCAATTATCCTGATAAGATC+TGG | + | chr4_1:17106169-17106188 | None:intergenic | 30.0% | |
| CTTTCGTTTATTCCTGAAAA+GGG | - | chr4_1:17106204-17106223 | Msa0537990:intron | 30.0% | |
| !!! | CTTTTAAGGTTTGATCCAAA+TGG | - | chr4_1:17106474-17106493 | Msa0537990:intron | 30.0% |
| CTTTAATATGCTTGTTCCAA+TGG | - | chr4_1:17106502-17106521 | Msa0537990:intron | 30.0% | |
| !! | ACAACAGAATTTGCTAAAGA+TGG | + | chr4_1:17106725-17106744 | None:intergenic | 30.0% |
| ! | TTGAACTTCTTCATGCTTTT+GGG | + | chr4_1:17106933-17106952 | None:intergenic | 30.0% |
| ! | ATAAGATTTTCGCGTCAATA+AGG | + | chr4_1:17106967-17106986 | None:intergenic | 30.0% |
| ATGTTATGAATGTTTAGGGA+AGG | - | chr4_1:17107134-17107153 | Msa0537990:five_prime_UTR | 30.0% | |
| GATTATGTATGAGTATGACA+GGG | - | chr4_1:17107163-17107182 | Msa0537990:five_prime_UTR | 30.0% | |
| TAGTGTAACGAAGATCATTA+TGG | - | chr4_1:17107270-17107289 | Msa0537990:five_prime_UTR | 30.0% | |
| ! | TCATTATGGATTACTCTTGT+TGG | - | chr4_1:17107284-17107303 | Msa0537990:five_prime_UTR | 30.0% |
| CTTGTGATTTAGTCTATGTT+TGG | - | chr4_1:17107315-17107334 | Msa0537990:five_prime_UTR | 30.0% | |
| GAACAGAAACAGAAAGAGTA+GGG | + | chr4_1:17103354-17103373 | None:intergenic | 35.0% | |
| TGAACAGAAACAGAAAGAGT+AGG | + | chr4_1:17103355-17103374 | None:intergenic | 35.0% | |
| !! | AGGATTTTGTTGTAGAACAG+TGG | + | chr4_1:17103749-17103768 | None:intergenic | 35.0% |
| TGAACATTTAGAGAGATCAG+AGG | + | chr4_1:17103799-17103818 | None:intergenic | 35.0% | |
| ! | AAAGGGATGTTTTTCCATGA+GGG | - | chr4_1:17104018-17104037 | Msa0537990:intron | 35.0% |
| GTGTATATAAATGAGTTGCC+CGG | + | chr4_1:17104082-17104101 | None:intergenic | 35.0% | |
| ! | ATCTTTTCTTTGTGGGACTT+GGG | + | chr4_1:17104151-17104170 | None:intergenic | 35.0% |
| ! | TATCTTTTCTTTGTGGGACT+TGG | + | chr4_1:17104152-17104171 | None:intergenic | 35.0% |
| AAGTCCCACAAAGAAAAGAT+AGG | - | chr4_1:17104151-17104170 | Msa0537990:intron | 35.0% | |
| TTAACACATCCTTACGAATC+CGG | + | chr4_1:17104223-17104242 | None:intergenic | 35.0% | |
| AGCAAAAACTCTTTGTTGGT+TGG | - | chr4_1:17104410-17104429 | Msa0537990:CDS | 35.0% | |
| ! | GCAAAAACTCTTTGTTGGTT+GGG | - | chr4_1:17104411-17104430 | Msa0537990:CDS | 35.0% |
| !!! | TTTTTTGTAGTATTGGGCTG+TGG | - | chr4_1:17104535-17104554 | Msa0537990:intron | 35.0% |
| TTTAGGAAATCTCAGAAAGC+AGG | - | chr4_1:17104621-17104640 | Msa0537990:intron | 35.0% | |
| ! | GGAAAAAGATTTGGTAGACA+AGG | - | chr4_1:17104647-17104666 | Msa0537990:intron | 35.0% |
| ! | TTTTCTGACTTACACTGATC+AGG | + | chr4_1:17104714-17104733 | None:intergenic | 35.0% |
| !!! | GCTTCTTTTTTAGGTGAAAC+GGG | - | chr4_1:17105051-17105070 | Msa0537990:CDS | 35.0% |
| TGAGTTGCATGATGCTTAAA+TGG | - | chr4_1:17105200-17105219 | Msa0537990:intron | 35.0% | |
| GAGTTGCATGATGCTTAAAT+GGG | - | chr4_1:17105201-17105220 | Msa0537990:intron | 35.0% | |
| ! | ATCAGGATTATGTTGGTGTT+GGG | + | chr4_1:17105312-17105331 | None:intergenic | 35.0% |
| AATCAGGATTATGTTGGTGT+TGG | + | chr4_1:17105313-17105332 | None:intergenic | 35.0% | |
| GATTAGGCATGTTCAAAATG+TGG | + | chr4_1:17105362-17105381 | None:intergenic | 35.0% | |
| GAGATTTGATAAATGTGGAC+AGG | + | chr4_1:17105498-17105517 | None:intergenic | 35.0% | |
| TGAAACATATTCTCTGTGTC+AGG | - | chr4_1:17105524-17105543 | Msa0537990:intron | 35.0% | |
| TTTGATGTAGATCTTGGAGA+TGG | + | chr4_1:17105569-17105588 | None:intergenic | 35.0% | |
| AGCTTCTTTGATGTAGATCT+TGG | + | chr4_1:17105575-17105594 | None:intergenic | 35.0% | |
| AAGATCTACATCAAAGAAGC+TGG | - | chr4_1:17105574-17105593 | Msa0537990:intron | 35.0% | |
| GCTTGAAAATATTCCCTACT+TGG | - | chr4_1:17105667-17105686 | Msa0537990:CDS | 35.0% | |
| TCCCTACTTGGATATTGAAA+CGG | - | chr4_1:17105679-17105698 | Msa0537990:CDS | 35.0% | |
| GATATTGAAACGGCATATGT+AGG | - | chr4_1:17105689-17105708 | Msa0537990:CDS | 35.0% | |
| TAGGTCAAATATGCTTGACT+TGG | - | chr4_1:17105708-17105727 | Msa0537990:CDS | 35.0% | |
| AGGTCAAATATGCTTGACTT+GGG | - | chr4_1:17105709-17105728 | Msa0537990:CDS | 35.0% | |
| ! | TGAAAATGAACCTTTTGAGC+AGG | - | chr4_1:17105856-17105875 | Msa0537990:CDS | 35.0% |
| ! | GAAAATGAACCTTTTGAGCA+GGG | - | chr4_1:17105857-17105876 | Msa0537990:CDS | 35.0% |
| ! | TTTGGAACCTGAAGTAGTTT+AGG | + | chr4_1:17105923-17105942 | None:intergenic | 35.0% |
| ATAACTTCAGGAACATCCAT+GGG | + | chr4_1:17105995-17106014 | None:intergenic | 35.0% | |
| AATAACTTCAGGAACATCCA+TGG | + | chr4_1:17105996-17106015 | None:intergenic | 35.0% | |
| TCAGGAATAAACGAAAGGTA+AGG | + | chr4_1:17106201-17106220 | None:intergenic | 35.0% | |
| !! | CCTTTTCAGGAATAAACGAA+AGG | + | chr4_1:17106206-17106225 | None:intergenic | 35.0% |
| CCTTTCGTTTATTCCTGAAA+AGG | - | chr4_1:17106203-17106222 | Msa0537990:intron | 35.0% | |
| !! | ACTTTTTCTTGTCCCTTTTC+AGG | + | chr4_1:17106219-17106238 | None:intergenic | 35.0% |
| TTTACCTTGTGATCCAACTT+TGG | - | chr4_1:17106330-17106349 | Msa0537990:intron | 35.0% | |
| AATTCCAAAGTTGGATCACA+AGG | + | chr4_1:17106337-17106356 | None:intergenic | 35.0% | |
| CCTGATTAGCATTTAACCAT+TGG | + | chr4_1:17106521-17106540 | None:intergenic | 35.0% | |
| CCAATGGTTAAATGCTAATC+AGG | - | chr4_1:17106518-17106537 | Msa0537990:intron | 35.0% | |
| TGATTTAGTGCTTGTCTTCA+TGG | - | chr4_1:17106800-17106819 | Msa0537990:intron | 35.0% | |
| AGGGTTGGAGAAAAAATTCT+TGG | - | chr4_1:17106906-17106925 | Msa0537990:intron | 35.0% | |
| ! | TGAACTTCTTCATGCTTTTG+GGG | + | chr4_1:17106932-17106951 | None:intergenic | 35.0% |
| ! | GTTGAACTTCTTCATGCTTT+TGG | + | chr4_1:17106934-17106953 | None:intergenic | 35.0% |
| GAAGAAGTTCAACTATTGCT+TGG | - | chr4_1:17106941-17106960 | Msa0537990:intron | 35.0% | |
| TTGACGCGAAAATCTTATCA+AGG | - | chr4_1:17106969-17106988 | Msa0537990:intron | 35.0% | |
| TGACGCGAAAATCTTATCAA+GGG | - | chr4_1:17106970-17106989 | Msa0537990:intron | 35.0% | |
| ATTAGCAAGGGAATAGAATG+GGG | + | chr4_1:17107096-17107115 | None:intergenic | 35.0% | |
| GATTAGCAAGGGAATAGAAT+GGG | + | chr4_1:17107097-17107116 | None:intergenic | 35.0% | |
| TGATTAGCAAGGGAATAGAA+TGG | + | chr4_1:17107098-17107117 | None:intergenic | 35.0% | |
| CTAAAGACTGTGATTAGCAA+GGG | + | chr4_1:17107108-17107127 | None:intergenic | 35.0% | |
| ACTAAAGACTGTGATTAGCA+AGG | + | chr4_1:17107109-17107128 | None:intergenic | 35.0% | |
| GGATTATGTATGAGTATGAC+AGG | - | chr4_1:17107162-17107181 | Msa0537990:five_prime_UTR | 35.0% | |
| TGTTCACTCTCTCTCTTCAT+AGG | - | chr4_1:17103369-17103388 | Msa0537990:three_prime_UTR | 40.0% | |
| CATGCAATAAAGTTGTGCAG+AGG | + | chr4_1:17103769-17103788 | None:intergenic | 40.0% | |
| ACATTTAGAGAGATCAGAGG+CGG | + | chr4_1:17103796-17103815 | None:intergenic | 40.0% | |
| ! | CTTTGCCTGTTTTATGCCAA+AGG | - | chr4_1:17103822-17103841 | Msa0537990:intron | 40.0% |
| GTCTACCTTTGGCATAAAAC+AGG | + | chr4_1:17103830-17103849 | None:intergenic | 40.0% | |
| ! | GAAAGGGATGTTTTTCCATG+AGG | - | chr4_1:17104017-17104036 | Msa0537990:intron | 40.0% |
| GAGCCTAATAATAACCCTCA+TGG | + | chr4_1:17104035-17104054 | None:intergenic | 40.0% | |
| ACATCAAGCCCAATAGTGTT+GGG | - | chr4_1:17104102-17104121 | Msa0537990:intron | 40.0% | |
| ! | AAACTCTTTGTTGGTTGGGT+TGG | - | chr4_1:17104415-17104434 | Msa0537990:CDS | 40.0% |
| AGCAGGTGTGGAAAAAGATT+TGG | - | chr4_1:17104638-17104657 | Msa0537990:intron | 40.0% | |
| TTACCAATGAGGTAAAGAGG+AGG | - | chr4_1:17104775-17104794 | Msa0537990:CDS | 40.0% | |
| TCGAGACATGAATCTTCTTC+AGG | + | chr4_1:17104840-17104859 | None:intergenic | 40.0% | |
| TGAAGAAGATTCATGTCTCG+AGG | - | chr4_1:17104839-17104858 | Msa0537990:CDS | 40.0% | |
| AAGATTCATGTCTCGAGGAA+GGG | - | chr4_1:17104844-17104863 | Msa0537990:CDS | 40.0% | |
| GTGCAGCATCTTAGTGAAAT+TGG | - | chr4_1:17105005-17105024 | Msa0537990:CDS | 40.0% | |
| !!! | TCTTTTTTAGGTGAAACGGG+AGG | - | chr4_1:17105054-17105073 | Msa0537990:CDS | 40.0% |
| !!! | CTTTTTTAGGTGAAACGGGA+GGG | - | chr4_1:17105055-17105074 | Msa0537990:CDS | 40.0% |
| TTTCAAGGAAAGACACCGAA+GGG | + | chr4_1:17105606-17105625 | None:intergenic | 40.0% | |
| !! | TTTTCAAGGAAAGACACCGA+AGG | + | chr4_1:17105607-17105626 | None:intergenic | 40.0% |
| AGATGTTCAGTCTCATCATC+AGG | + | chr4_1:17105641-17105660 | None:intergenic | 40.0% | |
| GCCGTTTCAATATCCAAGTA+GGG | + | chr4_1:17105683-17105702 | None:intergenic | 40.0% | |
| ! | TGCCGTTTCAATATCCAAGT+AGG | + | chr4_1:17105684-17105703 | None:intergenic | 40.0% |
| !! | TCAAATATGCTTGACTTGGG+AGG | - | chr4_1:17105712-17105731 | Msa0537990:CDS | 40.0% |
| GCAGGAGTTTCAACAATTTC+AGG | - | chr4_1:17105814-17105833 | Msa0537990:CDS | 40.0% | |
| ! | GAGCATAAATTTCAGGTCGA+GGG | + | chr4_1:17105883-17105902 | None:intergenic | 40.0% |
| CTAGAGCGAGCATAAATTTC+AGG | + | chr4_1:17105890-17105909 | None:intergenic | 40.0% | |
| CTGAAATTTATGCTCGCTCT+AGG | - | chr4_1:17105888-17105907 | Msa0537990:CDS | 40.0% | |
| CACTTTGCCTAAACTACTTC+AGG | - | chr4_1:17105913-17105932 | Msa0537990:CDS | 40.0% | |
| ! | CTTCAGGTTCCAAATATACG+AGG | - | chr4_1:17105929-17105948 | Msa0537990:CDS | 40.0% |
| TTCTTGCTCCAGATCTTATC+AGG | - | chr4_1:17106158-17106177 | Msa0537990:intron | 40.0% | |
| TCAAGCGTTATCAACCTGTT+TGG | - | chr4_1:17106238-17106257 | Msa0537990:intron | 40.0% | |
| ! | GCTGATTCTGATTTCCAAAC+AGG | + | chr4_1:17106255-17106274 | None:intergenic | 40.0% |
| !! | TCTGCTTTTAATCCAAGTGC+AGG | - | chr4_1:17106600-17106619 | Msa0537990:intron | 40.0% |
| CTTTAGATCATATGGGCAGT+AGG | + | chr4_1:17106690-17106709 | None:intergenic | 40.0% | |
| !! | CAAGGGTTCTAAGAATGACT+AGG | - | chr4_1:17106987-17107006 | Msa0537990:intron | 40.0% |
| ! | TGACTAGAGAACAGCTGTTT+TGG | - | chr4_1:17107011-17107030 | Msa0537990:five_prime_UTR | 40.0% |
| GAATGTTTAGGGAAGGTTTG+TGG | - | chr4_1:17107141-17107160 | Msa0537990:five_prime_UTR | 40.0% | |
| GAGTGAAGTGAAGTGAAGTG+AGG | + | chr4_1:17103549-17103568 | None:intergenic | 45.0% | |
| GCTTAGCTTAGATTGGAGCT+TGG | + | chr4_1:17103573-17103592 | None:intergenic | 45.0% | |
| CATTTAGAGAGATCAGAGGC+GGG | + | chr4_1:17103795-17103814 | None:intergenic | 45.0% | |
| TGGTATCAGAGCCTATTGAC+CGG | - | chr4_1:17104060-17104079 | Msa0537990:intron | 45.0% | |
| AAATGAGTTGCCCGGTCAAT+AGG | + | chr4_1:17104074-17104093 | None:intergenic | 45.0% | |
| CACATCAAGCCCAATAGTGT+TGG | - | chr4_1:17104101-17104120 | Msa0537990:intron | 45.0% | |
| CTGTCACACCCAACACTATT+GGG | + | chr4_1:17104113-17104132 | None:intergenic | 45.0% | |
| ! | CAATAGTGTTGGGTGTGACA+GGG | - | chr4_1:17104112-17104131 | Msa0537990:intron | 45.0% |
| ! | TTACGAATCCGGCTTGTAAG+GGG | + | chr4_1:17104212-17104231 | None:intergenic | 45.0% |
| ! | CTTACGAATCCGGCTTGTAA+GGG | + | chr4_1:17104213-17104232 | None:intergenic | 45.0% |
| ! | TAGTATTGGGCTGTGGCTTA+GGG | - | chr4_1:17104542-17104561 | Msa0537990:intron | 45.0% |
| AAAGGTGAGGTGGTAAAGCA+TGG | - | chr4_1:17104578-17104597 | Msa0537990:intron | 45.0% | |
| GAAATCTCAGAAAGCAGGTG+TGG | - | chr4_1:17104626-17104645 | Msa0537990:intron | 45.0% | |
| GAAGATTCATGTCTCGAGGA+AGG | - | chr4_1:17104843-17104862 | Msa0537990:CDS | 45.0% | |
| AGATTCATGTCTCGAGGAAG+GGG | - | chr4_1:17104845-17104864 | Msa0537990:CDS | 45.0% | |
| GAGAGACAGGACCAAATGAA+TGG | - | chr4_1:17104886-17104905 | Msa0537990:CDS | 45.0% | |
| AGACAGGACCAAATGAATGG+AGG | - | chr4_1:17104889-17104908 | Msa0537990:CDS | 45.0% | |
| GACAGGACCAAATGAATGGA+GGG | - | chr4_1:17104890-17104909 | Msa0537990:CDS | 45.0% | |
| ACCAAATGAATGGAGGGATG+TGG | - | chr4_1:17104896-17104915 | Msa0537990:CDS | 45.0% | |
| TCCACATCCCTCCATTCATT+TGG | + | chr4_1:17104900-17104919 | None:intergenic | 45.0% | |
| AAATGAATGGAGGGATGTGG+AGG | - | chr4_1:17104899-17104918 | Msa0537990:CDS | 45.0% | |
| CATCATGCAACTCATGTAGC+AGG | + | chr4_1:17105194-17105213 | None:intergenic | 45.0% | |
| CATGATGCTTAAATGGGTGC+TGG | - | chr4_1:17105207-17105226 | Msa0537990:intron | 45.0% | |
| !!! | GGTGCTGGCATTTTGAAACT+TGG | - | chr4_1:17105222-17105241 | Msa0537990:intron | 45.0% |
| ! | TTTGAAACTTGGATGCTGCC+TGG | - | chr4_1:17105233-17105252 | Msa0537990:intron | 45.0% |
| TTCAAGGAAAGACACCGAAG+GGG | + | chr4_1:17105605-17105624 | None:intergenic | 45.0% | |
| ! | CGAGCATAAATTTCAGGTCG+AGG | + | chr4_1:17105884-17105903 | None:intergenic | 45.0% |
| GTAGACTGAACCTGTTGTAG+AGG | + | chr4_1:17106286-17106305 | None:intergenic | 45.0% | |
| GGTTCAGTCTACTCTTGAGA+AGG | - | chr4_1:17106294-17106313 | Msa0537990:intron | 45.0% | |
| CAAGTGCAGGACAGCTTATT+GGG | - | chr4_1:17106613-17106632 | Msa0537990:intron | 45.0% | |
| GCAGAAAGTGGTGAAACTGA+AGG | - | chr4_1:17106871-17106890 | Msa0537990:intron | 45.0% | |
| TGGTGAAACTGAAGGAGCTA+AGG | - | chr4_1:17106879-17106898 | Msa0537990:intron | 45.0% | |
| ACTGAAGGAGCTAAGGAAGA+AGG | - | chr4_1:17106886-17106905 | Msa0537990:intron | 45.0% | |
| CTGAAGGAGCTAAGGAAGAA+GGG | - | chr4_1:17106887-17106906 | Msa0537990:intron | 45.0% | |
| !! | TTAAAAAAAAAAATGAAAAT+GGG | + | chr4_1:17103694-17103713 | None:intergenic | 5.0% |
| !! | ATTAAAAAAAAAAATGAAAA+TGG | + | chr4_1:17103695-17103714 | None:intergenic | 5.0% |
| GGTATCAGAGCCTATTGACC+GGG | - | chr4_1:17104061-17104080 | Msa0537990:intron | 50.0% | |
| CCTGTCACACCCAACACTAT+TGG | + | chr4_1:17104114-17104133 | None:intergenic | 50.0% | |
| ! | CCAATAGTGTTGGGTGTGAC+AGG | - | chr4_1:17104111-17104130 | Msa0537990:intron | 50.0% |
| TTGGGTGTGACAGGGTGTAT+TGG | - | chr4_1:17104120-17104139 | Msa0537990:intron | 50.0% | |
| ACAACTCTCCCCTTACAAGC+CGG | - | chr4_1:17104201-17104220 | Msa0537990:intron | 50.0% | |
| ! | CCTTACGAATCCGGCTTGTA+AGG | + | chr4_1:17104214-17104233 | None:intergenic | 50.0% |
| CCTTACAAGCCGGATTCGTA+AGG | - | chr4_1:17104211-17104230 | Msa0537990:intron | 50.0% | |
| ! | GTAGTATTGGGCTGTGGCTT+AGG | - | chr4_1:17104541-17104560 | Msa0537990:intron | 50.0% |
| ! | GTGTTGGGCTTTGATTCCTC+AGG | + | chr4_1:17104684-17104703 | None:intergenic | 50.0% |
| GAGGAATCAAAGCCCAACAC+TGG | - | chr4_1:17104684-17104703 | Msa0537990:intron | 50.0% | |
| GAATCAAAGCCCAACACTGG+TGG | - | chr4_1:17104687-17104706 | Msa0537990:intron | 50.0% | |
| TGATCAGGACCACCAGTGTT+GGG | + | chr4_1:17104699-17104718 | None:intergenic | 50.0% | |
| ! | CGATTCTTGTGCTGATGCTG+AGG | - | chr4_1:17104737-17104756 | Msa0537990:CDS | 50.0% |
| GAGCCTCCTCTTTACCTCAT+TGG | + | chr4_1:17104781-17104800 | None:intergenic | 50.0% | |
| TGAGGTAAAGAGGAGGCTCA+AGG | - | chr4_1:17104782-17104801 | Msa0537990:CDS | 50.0% | |
| GTTGAAACTCCTGCGCACTA+CGG | + | chr4_1:17105808-17105827 | None:intergenic | 50.0% | |
| TTCAGGAACATCCATGGGAC+AGG | + | chr4_1:17105990-17106009 | None:intergenic | 50.0% | |
| CTGAACCTGTTGTAGAGGAG+TGG | + | chr4_1:17106281-17106300 | None:intergenic | 50.0% | |
| CCAATAAGCTGTCCTGCACT+TGG | + | chr4_1:17106615-17106634 | None:intergenic | 50.0% | |
| CCAAGTGCAGGACAGCTTAT+TGG | - | chr4_1:17106612-17106631 | Msa0537990:intron | 50.0% | |
| TGCAGGACAGCTTATTGGGA+GGG | - | chr4_1:17106617-17106636 | Msa0537990:intron | 50.0% | |
| AGGAGCTAAGGAAGAAGGGT+TGG | - | chr4_1:17106891-17106910 | Msa0537990:intron | 50.0% | |
| CAAGGGAATAGAATGGGGCA+TGG | + | chr4_1:17107091-17107110 | None:intergenic | 50.0% | |
| GAGTATGACAGGGCATAGCA+AGG | - | chr4_1:17107173-17107192 | Msa0537990:five_prime_UTR | 50.0% | |
| TCGTCGTACGCTCAGATCAG+AGG | + | chr4_1:17103322-17103341 | None:intergenic | 55.0% | |
| ! | GGCTTTGATTCCTCAGGCTC+AGG | + | chr4_1:17104678-17104697 | None:intergenic | 55.0% |
| CTGATCAGGACCACCAGTGT+TGG | + | chr4_1:17104700-17104719 | None:intergenic | 55.0% | |
| TTCATGTCTCGAGGAAGGGG+AGG | - | chr4_1:17104848-17104867 | Msa0537990:CDS | 55.0% | |
| AGGGGAGGATGAAGAGGAAG+AGG | - | chr4_1:17104863-17104882 | Msa0537990:CDS | 55.0% | |
| GGGGAGGATGAAGAGGAAGA+GGG | - | chr4_1:17104864-17104883 | Msa0537990:CDS | 55.0% | |
| GAAGAGGAAGAGGGAGAGAC+AGG | - | chr4_1:17104873-17104892 | Msa0537990:CDS | 55.0% | |
| AGAAGCTGGCATCTCCCCTT+CGG | - | chr4_1:17105588-17105607 | Msa0537990:intron | 55.0% | |
| GCACTACGGCTGTAACAGGT+AGG | + | chr4_1:17105794-17105813 | None:intergenic | 55.0% | |
| CCATGGGACAGGCCACATAT+GGG | + | chr4_1:17105979-17105998 | None:intergenic | 55.0% | |
| TCCATGGGACAGGCCACATA+TGG | + | chr4_1:17105980-17105999 | None:intergenic | 55.0% | |
| GTGCAGGACAGCTTATTGGG+AGG | - | chr4_1:17106616-17106635 | Msa0537990:intron | 55.0% | |
| GCAGGACAGCTTATTGGGAG+GGG | - | chr4_1:17106618-17106637 | Msa0537990:intron | 55.0% | |
| CAGGACAGCTTATTGGGAGG+GGG | - | chr4_1:17106619-17106638 | Msa0537990:intron | 55.0% | |
| CGAGGAAGGGGAGGATGAAG+AGG | - | chr4_1:17104857-17104876 | Msa0537990:CDS | 60.0% | |
| TGGAGGGATGTGGAGGCAGA+AGG | - | chr4_1:17104906-17104925 | Msa0537990:CDS | 60.0% | |
| TGGAGGCAGAAGGCCAGCAA+TGG | - | chr4_1:17104916-17104935 | Msa0537990:CDS | 60.0% | |
| AGGCAGAAGGCCAGCAATGG+TGG | - | chr4_1:17104919-17104938 | Msa0537990:CDS | 60.0% | |
| CAAAGCCTCGCCACCATTGC+TGG | + | chr4_1:17104932-17104951 | None:intergenic | 60.0% | |
| CTGCGCACTACGGCTGTAAC+AGG | + | chr4_1:17105798-17105817 | None:intergenic | 60.0% | |
| CTGTTACAGCCGTAGTGCGC+AGG | - | chr4_1:17105796-17105815 | Msa0537990:CDS | 60.0% | |
| CCCATATGTGGCCTGTCCCA+TGG | - | chr4_1:17105976-17105995 | Msa0537990:CDS | 60.0% | |
| GCTCGCCACTCCTCTACAAC+AGG | - | chr4_1:17106273-17106292 | Msa0537990:intron | 60.0% | |
| CAAGGCAGTGCCTGAGCCTG+AGG | - | chr4_1:17104665-17104684 | Msa0537990:intron | 65.0% | |
| ! | GAAGGCCAGCAATGGTGGCG+AGG | - | chr4_1:17104924-17104943 | Msa0537990:CDS | 65.0% |
| GGTCGAGGGCCCTGCTCAAA+AGG | + | chr4_1:17105869-17105888 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 17103300 | 17107359 | 17103300 | ID=Msa0537990;Name=Msa0537990 |
| chr4_1 | mRNA | 17103300 | 17107359 | 17103300 | ID=Msa0537990-mRNA-1;Parent=Msa0537990;Name=Msa0537990-mRNA-1;_AED=0.08;_eAED=0.08;_QI=442|1|1|1|0.75|0.6|5|245|425 |
| chr4_1 | exon | 17103300 | 17103784 | 17103300 | ID=Msa0537990-mRNA-1:exon:5104;Parent=Msa0537990-mRNA-1 |
| chr4_1 | exon | 17104344 | 17104540 | 17104344 | ID=Msa0537990-mRNA-1:exon:5103;Parent=Msa0537990-mRNA-1 |
| chr4_1 | exon | 17104709 | 17105113 | 17104709 | ID=Msa0537990-mRNA-1:exon:5102;Parent=Msa0537990-mRNA-1 |
| chr4_1 | exon | 17105627 | 17106137 | 17105627 | ID=Msa0537990-mRNA-1:exon:5101;Parent=Msa0537990-mRNA-1 |
| chr4_1 | exon | 17106993 | 17107359 | 17106993 | ID=Msa0537990-mRNA-1:exon:5100;Parent=Msa0537990-mRNA-1 |
| chr4_1 | five_prime_UTR | 17106993 | 17107359 | 17106993 | ID=Msa0537990-mRNA-1:five_prime_utr;Parent=Msa0537990-mRNA-1 |
| chr4_1 | five_prime_UTR | 17106063 | 17106137 | 17106063 | ID=Msa0537990-mRNA-1:five_prime_utr;Parent=Msa0537990-mRNA-1 |
| chr4_1 | CDS | 17105627 | 17106062 | 17105627 | ID=Msa0537990-mRNA-1:cds;Parent=Msa0537990-mRNA-1 |
| chr4_1 | CDS | 17104709 | 17105113 | 17104709 | ID=Msa0537990-mRNA-1:cds;Parent=Msa0537990-mRNA-1 |
| chr4_1 | CDS | 17104344 | 17104540 | 17104344 | ID=Msa0537990-mRNA-1:cds;Parent=Msa0537990-mRNA-1 |
| chr4_1 | CDS | 17103545 | 17103784 | 17103545 | ID=Msa0537990-mRNA-1:cds;Parent=Msa0537990-mRNA-1 |
| chr4_1 | three_prime_UTR | 17103300 | 17103544 | 17103300 | ID=Msa0537990-mRNA-1:three_prime_utr;Parent=Msa0537990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
