AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1163180


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1163180 MtrunA17_Chr7g0259851 98.422 697 11 0 1 697 1 697 0.0 1413
Msa1163180 MtrunA17_Chr5g0394261 66.769 653 212 2 36 684 43 694 0.0 879
Msa1163180 MtrunA17_Chr1g0205751 63.836 683 237 5 11 685 18 698 0.0 867
Msa1163180 MtrunA17_Chr1g0149211 23.729 354 243 9 179 513 157 502 7.32e-18 87.8
Msa1163180 MtrunA17_Chr1g0152561 28.378 222 151 2 276 489 68 289 2.36e-17 84.3
Msa1163180 MtrunA17_Chr3g0106931 26.027 292 200 6 118 396 473 761 1.86e-14 77.4
Msa1163180 MtrunA17_Chr3g0106931 29.310 232 152 4 255 475 536 766 8.31e-13 72.0
Msa1163180 MtrunA17_Chr7g0259501 27.389 157 97 3 511 651 189 344 3.07e-14 75.5
Msa1163180 MtrunA17_Chr1g0185861 28.049 164 98 4 506 653 191 350 1.24e-13 73.6
Msa1163180 MtrunA17_Chr5g0440341 27.473 182 101 6 511 663 183 362 2.43e-13 72.4
Msa1163180 MtrunA17_Chr4g0031431 29.902 204 139 3 185 387 353 553 2.84e-13 73.2
Msa1163180 MtrunA17_Chr3g0125321 26.000 150 107 1 523 668 77 226 5.42e-13 69.7
Msa1163180 MtrunA17_Chr4g0044411 28.571 217 151 3 183 398 371 584 3.15e-12 70.1
Msa1163180 MtrunA17_Chr3g0124921 31.298 131 85 2 526 653 161 289 9.52e-12 67.0
Msa1163180 MtrunA17_Chr3g0084371 25.228 329 218 10 207 522 238 551 1.01e-11 68.6
Msa1163180 MtrunA17_Chr5g0447111 28.462 130 91 2 526 653 165 294 3.52e-11 65.1
Msa1163180 MtrunA17_Chr1g0199321 30.435 207 142 2 184 390 344 548 8.69e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1163180 AT5G19330.1 65.396 682 226 4 11 684 20 699 0.0 878
Msa1163180 AT5G13060.1 56.916 694 283 7 4 686 40 728 0.0 786
Msa1163180 AT5G19330.2 61.613 620 178 8 11 621 20 588 0.0 679
Msa1163180 AT5G58680.1 26.852 216 150 2 275 482 69 284 5.57e-17 83.6
Msa1163180 AT3G01400.1 27.570 214 147 2 277 482 73 286 2.13e-16 82.0
Msa1163180 AT3G06190.5 30.380 158 95 3 509 651 182 339 5.22e-16 80.9
Msa1163180 AT3G06190.1 30.380 158 95 3 509 651 182 339 6.12e-16 80.9
Msa1163180 AT3G03740.1 33.333 147 81 2 520 650 210 355 5.80e-15 78.6
Msa1163180 AT3G46510.1 27.174 276 166 5 192 467 361 601 1.05e-14 78.2
Msa1163180 AT5G19000.1 28.481 158 98 2 509 651 183 340 2.84e-13 72.8
Msa1163180 AT5G19000.3 28.481 158 98 2 509 651 183 340 2.84e-13 72.8
Msa1163180 AT1G71020.2 28.819 288 179 7 33 317 187 451 8.71e-13 71.6
Msa1163180 AT1G71020.1 28.819 288 179 7 33 317 335 599 1.14e-12 71.6
Msa1163180 AT5G67340.1 27.230 213 153 2 181 393 419 629 1.43e-12 71.6
Msa1163180 AT5G67340.2 27.230 213 153 2 181 393 419 629 1.43e-12 71.6
Msa1163180 AT3G43700.3 29.630 162 92 3 511 651 187 347 1.67e-12 70.1
Msa1163180 AT3G43700.2 29.630 162 92 3 511 651 187 347 1.71e-12 70.1
Msa1163180 AT3G43700.1 29.630 162 92 3 511 651 187 347 2.26e-12 70.1
Msa1163180 AT1G23030.1 28.505 214 148 4 185 396 333 543 5.70e-12 69.3
Msa1163180 AT1G23030.1 28.269 283 170 10 44 320 336 591 4.62e-11 66.6
Msa1163180 AT2G23140.2 27.273 253 170 8 249 489 520 770 9.35e-12 68.9
Msa1163180 AT2G23140.4 27.273 253 170 8 249 489 520 770 9.35e-12 68.9
Msa1163180 AT2G23140.1 27.273 253 170 8 249 489 523 773 9.70e-12 68.9
Msa1163180 AT5G50900.1 26.935 323 214 9 58 377 160 463 1.50e-11 68.2
Msa1163180 AT2G23140.3 26.877 253 171 8 249 489 331 581 1.87e-11 67.8
Msa1163180 AT2G23140.5 26.877 253 171 8 249 489 331 581 1.87e-11 67.8
Msa1163180 AT4G08455.1 27.778 126 91 0 539 664 109 234 7.21e-11 63.9
Msa1163180 AT3G54850.1 30.049 203 140 2 188 390 350 550 8.81e-11 65.9

Find 156 sgRNAs with CRISPR-Local

Find 650 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGACATCCCATTTAATATT+TGG 0.116816 7_4:-54267139 None:intergenic
TCCTGTTCTGGTGGAGATTC+TGG 0.134771 7_4:+54263203 Msa1163180:CDS
AGTAATCATATTTATATATT+TGG 0.139258 7_4:+54268068 Msa1163180:three_prime_UTR
GATATTGATCTGCAGCTTTA+AGG 0.182319 7_4:-54267316 None:intergenic
TAGAGATTCCAAATATTAAA+TGG 0.203610 7_4:+54267131 Msa1163180:CDS
AGACTTAAGCATCTCAATTA+AGG 0.205405 7_4:-54265158 None:intergenic
TTGAGAAATTACAGGGCTTT+TGG 0.248837 7_4:-54264139 None:intergenic
AGAACCTCTCTCTTAATTTC+TGG 0.255821 7_4:-54264732 None:intergenic
GACGAAAACGGTACCGTCTT+TGG 0.269861 7_4:-54263069 None:intergenic
AAGCGTCACCTTTCTGCTTT+GGG 0.276593 7_4:-54266207 None:intergenic
TTGCGGTGCTGTTCCTGTTC+TGG 0.279776 7_4:+54263191 Msa1163180:CDS
GAAGCGTCACCTTTCTGCTT+TGG 0.280164 7_4:-54266208 None:intergenic
AGATAGTTTGGTCTTTCTTT+AGG 0.280359 7_4:+54268101 Msa1163180:three_prime_UTR
AGGCTTGAGAATGCTGGTTT+TGG 0.286892 7_4:+54268121 Msa1163180:three_prime_UTR
CAATGTTGCGGTTATAATTA+AGG 0.290628 7_4:+54265566 Msa1163180:CDS
ACTATATTTATTGACAATAA+TGG 0.304416 7_4:+54266060 Msa1163180:CDS
TACCCAAGTGTTGTTACTCT+TGG 0.309521 7_4:+54268212 Msa1163180:three_prime_UTR
TCTGCTTTGGGTTTGTAGAT+TGG 0.317742 7_4:-54266195 None:intergenic
ATTAGATAAGAGTGTGGTTA+TGG 0.324185 7_4:-54262835 None:intergenic
CACACTCTTATCTAATCTAA+TGG 0.327419 7_4:+54262842 Msa1163180:exon
TCAGATTATCAAATTGCTTC+AGG 0.329746 7_4:-54267557 None:intergenic
AGGGGTTTATAGCGCCTCTT+TGG 0.331996 7_4:-54265138 None:intergenic
GGTACCGTCTTTGGCGAATT+CGG 0.339972 7_4:-54263060 None:intergenic
GTGTTGTATGTAGGTTTACT+TGG 0.350373 7_4:+54266511 Msa1163180:intron
GGCTGAGTATCAAGATAGTT+TGG 0.350898 7_4:+54268089 Msa1163180:three_prime_UTR
GTCTTCTGATTTACAGCTTA+GGG 0.356148 7_4:+54265177 Msa1163180:CDS
GTGTAACAAAGACGTTAAAA+AGG 0.367744 7_4:+54265819 Msa1163180:CDS
ACCCAAGTGTTGTTACTCTT+GGG 0.378149 7_4:+54268213 Msa1163180:three_prime_UTR
TCACGGTGCTCCTGTGCAAT+TGG 0.378210 7_4:-54267924 None:intergenic
TCTTCTTACTCACCCTCATT+TGG 0.378986 7_4:+54267738 Msa1163180:CDS
AAGATCTAAACGACGAGGTT+TGG 0.379087 7_4:-54262940 None:intergenic
GCAGATCAATATCTTCTTGA+TGG 0.379447 7_4:+54267326 Msa1163180:CDS
AATAACATGAAGTACAGTTC+TGG 0.391347 7_4:-54268017 None:intergenic
AATTAAGAGAGAGGTTCTTC+TGG 0.391924 7_4:+54264737 Msa1163180:CDS
CAAATATATAGTTGATTGGT+AGG 0.393862 7_4:+54267960 Msa1163180:three_prime_UTR
AACAGTGCTTGAGAAATTAC+AGG 0.395439 7_4:-54264147 None:intergenic
TATGGTGGTGGTGGTGATTG+TGG 0.396541 7_4:-54262817 None:intergenic
GACTTAAGCATCTCAATTAA+GGG 0.403091 7_4:-54265157 None:intergenic
TTGGACTGAAGAAGATGAAA+TGG 0.404832 7_4:+54262905 Msa1163180:CDS
CACCTCAGTAAGCAAATAAC+AGG 0.405029 7_4:-54264774 None:intergenic
TTCTTTAGGCTTGAGAATGC+TGG 0.410452 7_4:+54268115 Msa1163180:three_prime_UTR
AGTCTTCTGATTTACAGCTT+AGG 0.411735 7_4:+54265176 Msa1163180:CDS
TGGAGCAGTAGATATTGATT+TGG 0.413854 7_4:+54267277 Msa1163180:CDS
TCCAGAATCTCCACCAGAAC+AGG 0.415975 7_4:-54263204 None:intergenic
TGCACTTGGGAGGTTGGCAC+AGG 0.420601 7_4:+54265213 Msa1163180:CDS
GATGTCACATTCATAGTTGA+AGG 0.425234 7_4:+54266566 Msa1163180:CDS
CATTTCGTGCAATGTTTGAT+GGG 0.429668 7_4:+54266744 Msa1163180:CDS
CGATTCTTATAAGTATGATA+TGG 0.432884 7_4:+54263248 Msa1163180:CDS
GATCTTCTTGACACAAAGAA+TGG 0.434414 7_4:+54265380 Msa1163180:CDS
AAGAGAGAGGTTCTTCTGGC+TGG 0.435007 7_4:+54264741 Msa1163180:CDS
GAGTATGCACGCATATCTTA+AGG 0.435506 7_4:-54267529 None:intergenic
GAATGATAGCTCCTGCTGTC+TGG 0.436068 7_4:+54264952 Msa1163180:intron
ACATTTCGTGCAATGTTTGA+TGG 0.436720 7_4:+54266743 Msa1163180:CDS
TCTTATGCGCACTGGGGAAA+AGG 0.447076 7_4:+54265978 Msa1163180:CDS
GGGGTTTATAGCGCCTCTTT+GGG 0.460080 7_4:-54265137 None:intergenic
GGTTGGCGTGATTGGAAATC+TGG 0.461285 7_4:+54264698 Msa1163180:intron
GAGAAGAATTTGTGAATGTC+TGG 0.467367 7_4:-54267712 None:intergenic
CCAACTCTTGTACTAATGCT+TGG 0.468473 7_4:+54264543 Msa1163180:CDS
ATGTTATATCTTATGCGCAC+TGG 0.469956 7_4:+54265970 Msa1163180:CDS
AAGGAGTGTGCGTTTATCCT+TGG 0.470965 7_4:+54263273 Msa1163180:CDS
CTTTAACAACTCTACGAGAT+AGG 0.471201 7_4:-54264112 None:intergenic
TGTTATATCTTATGCGCACT+GGG 0.471608 7_4:+54265971 Msa1163180:CDS
AGAGAGAGGTTCTTCTGGCT+GGG 0.476825 7_4:+54264742 Msa1163180:CDS
AGAGATTCCAAATATTAAAT+GGG 0.477674 7_4:+54267132 Msa1163180:CDS
AATGTGACATCAGAAAGTTT+AGG 0.478183 7_4:-54266554 None:intergenic
TAACATAACATACCATGGTT+TGG 0.478501 7_4:-54267583 None:intergenic
TACATAACAAGCTGCTAGCC+TGG 0.480224 7_4:+54268244 Msa1163180:three_prime_UTR
CATATCATACTTATAAGAAT+CGG 0.486085 7_4:-54263247 None:intergenic
CAACGACTCATTGTTGATGC+TGG 0.489469 7_4:+54264081 Msa1163180:CDS
GTTTGAAGAGAAAACTCGAT+TGG 0.493650 7_4:+54262886 Msa1163180:CDS
TTAAAAGAGCTGCTTCTCTT+CGG 0.494511 7_4:-54264979 None:intergenic
AACCCAAGAGTAACAACACT+TGG 0.500834 7_4:-54268215 None:intergenic
TATTGATTTGGATCTTGCTC+CGG 0.501036 7_4:+54267289 Msa1163180:CDS
GAGAGAGGTTCTTCTGGCTG+GGG 0.513395 7_4:+54264743 Msa1163180:CDS
GCTTCACACAATGGCTATGA+AGG 0.513599 7_4:+54266237 Msa1163180:CDS
TTCCCACTGATATTTCCAAT+CGG 0.514687 7_4:+54262961 Msa1163180:CDS
ACGCAAAATACCTGGGGAGT+TGG 0.519537 7_4:-54266298 None:intergenic
AGAATCGGCATCACAATCTC+CGG 0.521741 7_4:-54263232 None:intergenic
AAATATATAGTTGATTGGTA+GGG 0.524851 7_4:+54267961 Msa1163180:three_prime_UTR
TCTGCAGCTTTAAGGAGGTC+CGG 0.526083 7_4:-54267308 None:intergenic
ACAATGAGTCGTTGATACTC+TGG 0.527133 7_4:-54264072 None:intergenic
ACCTGGGGAGTTGGTGATGT+AGG 0.528742 7_4:-54266289 None:intergenic
TGTTGTATGTAGGTTTACTT+GGG 0.530431 7_4:+54266512 Msa1163180:intron
CAGATTCACATTGCCCAAAG+AGG 0.532012 7_4:+54265124 Msa1163180:intron
TTTGTTACACACTCTTGAGT+AGG 0.537578 7_4:-54265806 None:intergenic
CCAACATCAAGACCCTTGTC+AGG 0.538099 7_4:+54264226 Msa1163180:CDS
TCTTAATTTCTGGCGAAGAG+TGG 0.539798 7_4:-54264722 None:intergenic
CGGTGCTGTTCCTGTTCTGG+TGG 0.542335 7_4:+54263194 Msa1163180:CDS
CTATGGTCTGGCTGATAATG+AGG 0.544086 7_4:+54265433 Msa1163180:CDS
TCTTCGGCTCTCCAGACAGC+AGG 0.544227 7_4:-54264963 None:intergenic
TTTGAGAAGATGAATCCGAT+TGG 0.544844 7_4:-54262976 None:intergenic
GAGTGTGGTTATGGTGGTGG+TGG 0.546780 7_4:-54262826 None:intergenic
CCAAGCATTAGTACAAGAGT+TGG 0.552110 7_4:-54264543 None:intergenic
GTTGCGGTTATAATTAAGGC+TGG 0.552330 7_4:+54265570 Msa1163180:CDS
CAAGCTGGTATTGCTTATAA+CGG 0.554280 7_4:+54265338 Msa1163180:CDS
GGAGTTGGTGATGTAGGAGC+AGG 0.555796 7_4:-54266283 None:intergenic
TCCTACATCACCAACTCCCC+AGG 0.558785 7_4:+54266288 Msa1163180:CDS
GTGGAGATTCTGGAGATGGC+CGG 0.559180 7_4:+54263213 Msa1163180:CDS
AATTCAAGCAATTCAACAAG+AGG 0.560898 7_4:-54264346 None:intergenic
AACCGCTTCATAATGTATTG+AGG 0.563257 7_4:-54264577 None:intergenic
ACTTAAGCATCTCAATTAAG+GGG 0.564869 7_4:-54265156 None:intergenic
TCTGGTGGAGATTCTGGAGA+TGG 0.564942 7_4:+54263209 Msa1163180:CDS
TCAAGCAATTCAACAAGAGG+AGG 0.566321 7_4:-54264343 None:intergenic
AAGGTACAGAGAGCAGCTGC+AGG 0.568257 7_4:+54264379 Msa1163180:CDS
TAGCTTCTGTCCAATTGCAC+AGG 0.571047 7_4:+54267914 Msa1163180:three_prime_UTR
AATTGGTCAATTTGCTACAA+CGG 0.573233 7_4:+54265000 Msa1163180:CDS
CTCTCCGAATTCGCCAAAGA+CGG 0.574852 7_4:+54263056 Msa1163180:CDS
CAGCACGAGTTAGCCAAATG+AGG 0.576411 7_4:-54267751 None:intergenic
TTCCTCAATACATTATGAAG+CGG 0.576701 7_4:+54264575 Msa1163180:CDS
GATGCTATGTTCAGGTTGGA+CGG 0.576722 7_4:+54264313 Msa1163180:intron
CCTGACAAGGGTCTTGATGT+TGG 0.578889 7_4:-54264226 None:intergenic
TAAGAGTGTGGTTATGGTGG+TGG 0.579750 7_4:-54262829 None:intergenic
ATTTCGTGCAATGTTTGATG+GGG 0.582844 7_4:+54266745 Msa1163180:CDS
GCTTGAATTCAATGATACAA+AGG 0.586748 7_4:+54264360 Msa1163180:CDS
AGGAGCAGGATCAACAATAG+AGG 0.588221 7_4:-54266269 None:intergenic
AGATAAGAGTGTGGTTATGG+TGG 0.588342 7_4:-54262832 None:intergenic
GAGCAGCTGCAGGTGCCTTG+CGG 0.589452 7_4:+54264389 Msa1163180:CDS
TTCGCCAGAAATTAAGAGAG+AGG 0.590935 7_4:+54264728 Msa1163180:CDS
TACAACGGATTCAGATTGCA+AGG 0.591132 7_4:+54265015 Msa1163180:CDS
AAAAGCTGCGTTGTGTTGAA+CGG 0.591611 7_4:-54265405 None:intergenic
TCTACAAACCCAAAGCAGAA+AGG 0.592223 7_4:+54266199 Msa1163180:CDS
TATACAAGTAACACAGTACC+AGG 0.593177 7_4:-54268262 None:intergenic
GGAAGAGAAGATGCAAGGGC+GGG 0.593803 7_4:+54265844 Msa1163180:CDS
GCGGTTATAATTAAGGCTGG+TGG 0.596505 7_4:+54265573 Msa1163180:CDS
ACATAATTACTTTGACAGCA+AGG 0.597151 7_4:-54263299 None:intergenic
AATCCGATTGGAAATATCAG+TGG 0.599102 7_4:-54262964 None:intergenic
CTTTGACAGCAAGGAGACCA+AGG 0.605786 7_4:-54263290 None:intergenic
AGCCTGTTATTTGCTTACTG+AGG 0.611059 7_4:+54264772 Msa1163180:CDS
TTCAGCAGCGCTTCACACAA+TGG 0.615813 7_4:+54266228 Msa1163180:CDS
GGTTGGAAGAGAAGATGCAA+GGG 0.616947 7_4:+54265840 Msa1163180:CDS
TTGCGAATATGCTATTTCTG+AGG 0.617242 7_4:+54267361 Msa1163180:CDS
ATCCGATTGGAAATATCAGT+GGG 0.618352 7_4:-54262963 None:intergenic
TTGAAATGCGAGAGTCCGCA+AGG 0.619046 7_4:-54264404 None:intergenic
AGGTTGGAAGAGAAGATGCA+AGG 0.620033 7_4:+54265839 Msa1163180:CDS
ATTGATCTGCAGCTTTAAGG+AGG 0.621836 7_4:-54267313 None:intergenic
TGTATGACAGGACAATGTTG+CGG 0.623919 7_4:+54265554 Msa1163180:intron
CAAGCAATTCAACAAGAGGA+GGG 0.624329 7_4:-54264342 None:intergenic
AGCACGAGTTAGCCAAATGA+GGG 0.625600 7_4:-54267750 None:intergenic
CGTCTTTGGCGAATTCGGAG+AGG 0.626688 7_4:-54263055 None:intergenic
GTTGATGTTATAGTCAATTG+CGG 0.627271 7_4:+54263174 Msa1163180:CDS
TTTCGTGCAATGTTTGATGG+GGG 0.629862 7_4:+54266746 Msa1163180:CDS
TTATAAGTATGATATGGAGA+AGG 0.629891 7_4:+54263254 Msa1163180:CDS
TAGGACTCACACAATCAAGC+TGG 0.630352 7_4:+54265323 Msa1163180:intron
ACCCAAGAGTAACAACACTT+GGG 0.636389 7_4:-54268214 None:intergenic
CAACTCTACGAGATAGGACA+AGG 0.637463 7_4:-54264106 None:intergenic
TGGAAGAGAAGATGCAAGGG+CGG 0.639012 7_4:+54265843 Msa1163180:CDS
ATTCTTGTAGGATATTTCTG+TGG 0.643820 7_4:+54267458 Msa1163180:intron
ACAGTGCTTGAGAAATTACA+GGG 0.650555 7_4:-54264146 None:intergenic
GCTGGTATTGCTTATAACGG+TGG 0.661504 7_4:+54265341 Msa1163180:CDS
ATGTCTTTGAGTTGATGATG+AGG 0.668712 7_4:+54267155 Msa1163180:CDS
CATTAGATTAGATAAGAGTG+TGG 0.674844 7_4:-54262841 None:intergenic
ATAATCTGAGTACCAAACCA+TGG 0.693303 7_4:+54267571 Msa1163180:CDS
GTGTCAAGAAGATCAAGCAG+AGG 0.704906 7_4:-54265371 None:intergenic
GCTATGTTCAGGTTGGACGG+TGG 0.729893 7_4:+54264316 Msa1163180:intron
GTTATATCTTATGCGCACTG+GGG 0.753652 7_4:+54265972 Msa1163180:CDS
GTGGGAAGATCTAAACGACG+AGG 0.773323 7_4:-54262945 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATTAATAATTATGTTATTA+AGG + chr7_4:54263813-54263832 Msa1163180:intron 10.0%
!! TAAAGCAAAATTTAATATAA+GGG - chr7_4:54264626-54264645 None:intergenic 10.0%
!! ATAAAGCAAAATTTAATATA+AGG - chr7_4:54264627-54264646 None:intergenic 10.0%
!! ATATTAAATGATTAATATAG+AGG - chr7_4:54264905-54264924 None:intergenic 10.0%
!! GAATTATTATATAAACATTT+AGG - chr7_4:54265299-54265318 None:intergenic 10.0%
!! TTTATATAATAATTCATGTT+AGG + chr7_4:54265304-54265323 Msa1163180:intron 10.0%
!!! ATTCTATTTTCTATATATTA+TGG + chr7_4:54266457-54266476 Msa1163180:intron 10.0%
!!! TTCTATTTTCTATATATTAT+GGG + chr7_4:54266458-54266477 Msa1163180:intron 10.0%
!!! TATTTTTGTTGAATTTTTAA+TGG + chr7_4:54267413-54267432 Msa1163180:intron 10.0%
!! AGTAATCATATTTATATATT+TGG + chr7_4:54268068-54268087 Msa1163180:three_prime_UTR 10.0%
!! GATTAATAATTATGTTATTA+AGG + chr7_4:54263813-54263832 Msa1163180:intron 10.0%
!! TAAAGCAAAATTTAATATAA+GGG - chr7_4:54264626-54264645 None:intergenic 10.0%
!! ATAAAGCAAAATTTAATATA+AGG - chr7_4:54264627-54264646 None:intergenic 10.0%
!! ATATTAAATGATTAATATAG+AGG - chr7_4:54264905-54264924 None:intergenic 10.0%
!! GAATTATTATATAAACATTT+AGG - chr7_4:54265299-54265318 None:intergenic 10.0%
!! TTTATATAATAATTCATGTT+AGG + chr7_4:54265304-54265323 Msa1163180:intron 10.0%
!!! ATTCTATTTTCTATATATTA+TGG + chr7_4:54266457-54266476 Msa1163180:intron 10.0%
!!! TTCTATTTTCTATATATTAT+GGG + chr7_4:54266458-54266477 Msa1163180:intron 10.0%
!!! TATTTTTGTTGAATTTTTAA+TGG + chr7_4:54267413-54267432 Msa1163180:intron 10.0%
!! AGTAATCATATTTATATATT+TGG + chr7_4:54268068-54268087 Msa1163180:three_prime_UTR 10.0%
!! AAAGCAAAATTTAATATAAG+GGG - chr7_4:54264625-54264644 None:intergenic 15.0%
!! ACTATATTTATTGACAATAA+TGG + chr7_4:54266060-54266079 Msa1163180:CDS 15.0%
!!! TCTATTTTCTATATATTATG+GGG + chr7_4:54266459-54266478 Msa1163180:intron 15.0%
!!! AGATTTTCTGTTAAAATTTT+AGG + chr7_4:54267243-54267262 Msa1163180:intron 15.0%
!! AGATTGAGAAAATAAAAATA+TGG - chr7_4:54267654-54267673 None:intergenic 15.0%
!!! TTTTCAAATATATAGTTGAT+TGG + chr7_4:54267956-54267975 Msa1163180:three_prime_UTR 15.0%
!! AAAGCAAAATTTAATATAAG+GGG - chr7_4:54264625-54264644 None:intergenic 15.0%
!! ACTATATTTATTGACAATAA+TGG + chr7_4:54266060-54266079 Msa1163180:CDS 15.0%
!!! TCTATTTTCTATATATTATG+GGG + chr7_4:54266459-54266478 Msa1163180:intron 15.0%
!!! AGATTTTCTGTTAAAATTTT+AGG + chr7_4:54267243-54267262 Msa1163180:intron 15.0%
!! AGATTGAGAAAATAAAAATA+TGG - chr7_4:54267654-54267673 None:intergenic 15.0%
!!! TTTTCAAATATATAGTTGAT+TGG + chr7_4:54267956-54267975 Msa1163180:three_prime_UTR 15.0%
!! CATATCATACTTATAAGAAT+CGG - chr7_4:54263250-54263269 None:intergenic 20.0%
!! TAGATTATGTTTGAAGATTA+GGG + chr7_4:54263458-54263477 Msa1163180:intron 20.0%
!!! CATAGTTTAATCCTTTAAAA+TGG - chr7_4:54263496-54263515 None:intergenic 20.0%
!!! TTTTGAAAAGTTAGAAGATT+AGG + chr7_4:54263674-54263693 Msa1163180:intron 20.0%
!! TTTGAAAAGTTAGAAGATTA+GGG + chr7_4:54263675-54263694 Msa1163180:intron 20.0%
!! TCATTTCAAATGTTTAAACT+AGG + chr7_4:54263711-54263730 Msa1163180:intron 20.0%
!! CATTTAAAAAAAGAGACAAA+TGG - chr7_4:54263977-54263996 None:intergenic 20.0%
!! ATCATGAAGTATATTAACTT+GGG + chr7_4:54264017-54264036 Msa1163180:intron 20.0%
!!! TTTTTCTTAAAACAATCCAT+AGG + chr7_4:54264820-54264839 Msa1163180:intron 20.0%
!! ATTTAGTTGTTTGTTTATCA+AGG + chr7_4:54265713-54265732 Msa1163180:intron 20.0%
!! ATAATGTAAACAATAGTACA+AGG - chr7_4:54265903-54265922 None:intergenic 20.0%
!! TGTACTATTGTTTACATTAT+TGG + chr7_4:54265903-54265922 Msa1163180:intron 20.0%
!! TCAATTGAATTGTGTAATTA+TGG - chr7_4:54266400-54266419 None:intergenic 20.0%
!!! TGTTTTCTGTCAATTTTTTT+TGG + chr7_4:54266616-54266635 Msa1163180:intron 20.0%
!!! ATTTGGAATCTCTATATTTT+TGG - chr7_4:54267125-54267144 None:intergenic 20.0%
!! TAGAGATTCCAAATATTAAA+TGG + chr7_4:54267131-54267150 Msa1163180:CDS 20.0%
!! AGAGATTCCAAATATTAAAT+GGG + chr7_4:54267132-54267151 Msa1163180:CDS 20.0%
!!! AATTTTAGGTATATATACAC+TGG + chr7_4:54267257-54267276 Msa1163180:intron 20.0%
!! TTTGAAAAACTACAAAATCA+CGG - chr7_4:54267944-54267963 None:intergenic 20.0%
!! AAATATATAGTTGATTGGTA+GGG + chr7_4:54267961-54267980 Msa1163180:three_prime_UTR 20.0%
!! CATATCATACTTATAAGAAT+CGG - chr7_4:54263250-54263269 None:intergenic 20.0%
!! TAGATTATGTTTGAAGATTA+GGG + chr7_4:54263458-54263477 Msa1163180:intron 20.0%
!!! CATAGTTTAATCCTTTAAAA+TGG - chr7_4:54263496-54263515 None:intergenic 20.0%
!!! TTTTGAAAAGTTAGAAGATT+AGG + chr7_4:54263674-54263693 Msa1163180:intron 20.0%
!! TTTGAAAAGTTAGAAGATTA+GGG + chr7_4:54263675-54263694 Msa1163180:intron 20.0%
!! TCATTTCAAATGTTTAAACT+AGG + chr7_4:54263711-54263730 Msa1163180:intron 20.0%
!! CATTTAAAAAAAGAGACAAA+TGG - chr7_4:54263977-54263996 None:intergenic 20.0%
!! ATCATGAAGTATATTAACTT+GGG + chr7_4:54264017-54264036 Msa1163180:intron 20.0%
!!! TTTTTCTTAAAACAATCCAT+AGG + chr7_4:54264820-54264839 Msa1163180:intron 20.0%
!! ATTTAGTTGTTTGTTTATCA+AGG + chr7_4:54265713-54265732 Msa1163180:intron 20.0%
!! ATAATGTAAACAATAGTACA+AGG - chr7_4:54265903-54265922 None:intergenic 20.0%
!! TGTACTATTGTTTACATTAT+TGG + chr7_4:54265903-54265922 Msa1163180:intron 20.0%
!! TCAATTGAATTGTGTAATTA+TGG - chr7_4:54266400-54266419 None:intergenic 20.0%
!!! TGTTTTCTGTCAATTTTTTT+TGG + chr7_4:54266616-54266635 Msa1163180:intron 20.0%
!!! ATTTGGAATCTCTATATTTT+TGG - chr7_4:54267125-54267144 None:intergenic 20.0%
!! TAGAGATTCCAAATATTAAA+TGG + chr7_4:54267131-54267150 Msa1163180:CDS 20.0%
!! AGAGATTCCAAATATTAAAT+GGG + chr7_4:54267132-54267151 Msa1163180:CDS 20.0%
!!! AATTTTAGGTATATATACAC+TGG + chr7_4:54267257-54267276 Msa1163180:intron 20.0%
!! TTTGAAAAACTACAAAATCA+CGG - chr7_4:54267944-54267963 None:intergenic 20.0%
!! AAATATATAGTTGATTGGTA+GGG + chr7_4:54267961-54267980 Msa1163180:three_prime_UTR 20.0%
! AAAAATCGAATTGAACAACA+CGG - chr7_4:54263098-54263117 None:intergenic 25.0%
!!! TGATCTATCTTATTTTGTAG+AGG + chr7_4:54263146-54263165 Msa1163180:intron 25.0%
! CGATTCTTATAAGTATGATA+TGG + chr7_4:54263248-54263267 Msa1163180:CDS 25.0%
! TTATAAGTATGATATGGAGA+AGG + chr7_4:54263254-54263273 Msa1163180:CDS 25.0%
! GTAGATTATGTTTGAAGATT+AGG + chr7_4:54263457-54263476 Msa1163180:intron 25.0%
!! TGAGAAATGATCCATTTTAA+AGG + chr7_4:54263482-54263501 Msa1163180:intron 25.0%
! CTATAGTGTAGAAATTAATC+AGG + chr7_4:54263592-54263611 Msa1163180:intron 25.0%
! CATCATGAAGTATATTAACT+TGG + chr7_4:54264016-54264035 Msa1163180:intron 25.0%
! AATTTCAAAAAACCTGACAA+GGG - chr7_4:54264241-54264260 None:intergenic 25.0%
! ATACATAGCATACATATCTA+AGG - chr7_4:54264270-54264289 None:intergenic 25.0%
!!! CATAGCATCTATTTTAGAAT+AGG - chr7_4:54264302-54264321 None:intergenic 25.0%
! CTATCATTCAAATCATAGAT+TGG - chr7_4:54264941-54264960 None:intergenic 25.0%
! AGGCATCAATGATTAATAAA+GGG - chr7_4:54265504-54265523 None:intergenic 25.0%
! TATAAATTAGTGAGAAGAAG+AGG - chr7_4:54265747-54265766 None:intergenic 25.0%
!!! ATATAGTTTTACGATCATCA+GGG - chr7_4:54266047-54266066 None:intergenic 25.0%
!!! AATATAGTTTTACGATCATC+AGG - chr7_4:54266048-54266067 None:intergenic 25.0%
! GAAAACAATAACAAAAACTG+TGG - chr7_4:54266603-54266622 None:intergenic 25.0%
!!! TCGTTTAATTTTATGTATCC+TGG + chr7_4:54266810-54266829 Msa1163180:intron 25.0%
!! AAGTATAAAGTTGATTGTGA+TGG + chr7_4:54266925-54266944 Msa1163180:intron 25.0%
! TACATTGTAAGACATTACTA+AGG - chr7_4:54267084-54267103 None:intergenic 25.0%
! AAGACATCCCATTTAATATT+TGG - chr7_4:54267142-54267161 None:intergenic 25.0%
!! CGTCAAAGTGTTATATAAAA+GGG - chr7_4:54267195-54267214 None:intergenic 25.0%
!! ACGTCAAAGTGTTATATAAA+AGG - chr7_4:54267196-54267215 None:intergenic 25.0%
! ACTTTGACGTTTCTATAATA+AGG + chr7_4:54267206-54267225 Msa1163180:intron 25.0%
! CACTGTTAAATTATTCTTGT+AGG + chr7_4:54267446-54267465 Msa1163180:intron 25.0%
! TAAAGTAACATAACATACCA+TGG - chr7_4:54267591-54267610 None:intergenic 25.0%
! CAAATATATAGTTGATTGGT+AGG + chr7_4:54267960-54267979 Msa1163180:three_prime_UTR 25.0%
!!! TGGTTTTGGTCTTAAATTAT+CGG + chr7_4:54268135-54268154 Msa1163180:three_prime_UTR 25.0%
! AAAAATCGAATTGAACAACA+CGG - chr7_4:54263098-54263117 None:intergenic 25.0%
!!! TGATCTATCTTATTTTGTAG+AGG + chr7_4:54263146-54263165 Msa1163180:intron 25.0%
! CGATTCTTATAAGTATGATA+TGG + chr7_4:54263248-54263267 Msa1163180:CDS 25.0%
! TTATAAGTATGATATGGAGA+AGG + chr7_4:54263254-54263273 Msa1163180:CDS 25.0%
! GTAGATTATGTTTGAAGATT+AGG + chr7_4:54263457-54263476 Msa1163180:intron 25.0%
!! TGAGAAATGATCCATTTTAA+AGG + chr7_4:54263482-54263501 Msa1163180:intron 25.0%
! CTATAGTGTAGAAATTAATC+AGG + chr7_4:54263592-54263611 Msa1163180:intron 25.0%
! CATCATGAAGTATATTAACT+TGG + chr7_4:54264016-54264035 Msa1163180:intron 25.0%
! AATTTCAAAAAACCTGACAA+GGG - chr7_4:54264241-54264260 None:intergenic 25.0%
! ATACATAGCATACATATCTA+AGG - chr7_4:54264270-54264289 None:intergenic 25.0%
!!! CATAGCATCTATTTTAGAAT+AGG - chr7_4:54264302-54264321 None:intergenic 25.0%
! CTATCATTCAAATCATAGAT+TGG - chr7_4:54264941-54264960 None:intergenic 25.0%
! AGGCATCAATGATTAATAAA+GGG - chr7_4:54265504-54265523 None:intergenic 25.0%
! TATAAATTAGTGAGAAGAAG+AGG - chr7_4:54265747-54265766 None:intergenic 25.0%
!!! ATATAGTTTTACGATCATCA+GGG - chr7_4:54266047-54266066 None:intergenic 25.0%
!!! AATATAGTTTTACGATCATC+AGG - chr7_4:54266048-54266067 None:intergenic 25.0%
! GAAAACAATAACAAAAACTG+TGG - chr7_4:54266603-54266622 None:intergenic 25.0%
!!! TCGTTTAATTTTATGTATCC+TGG + chr7_4:54266810-54266829 Msa1163180:intron 25.0%
!! AAGTATAAAGTTGATTGTGA+TGG + chr7_4:54266925-54266944 Msa1163180:intron 25.0%
! TACATTGTAAGACATTACTA+AGG - chr7_4:54267084-54267103 None:intergenic 25.0%
! AAGACATCCCATTTAATATT+TGG - chr7_4:54267142-54267161 None:intergenic 25.0%
!! CGTCAAAGTGTTATATAAAA+GGG - chr7_4:54267195-54267214 None:intergenic 25.0%
!! ACGTCAAAGTGTTATATAAA+AGG - chr7_4:54267196-54267215 None:intergenic 25.0%
! ACTTTGACGTTTCTATAATA+AGG + chr7_4:54267206-54267225 Msa1163180:intron 25.0%
! CACTGTTAAATTATTCTTGT+AGG + chr7_4:54267446-54267465 Msa1163180:intron 25.0%
! TAAAGTAACATAACATACCA+TGG - chr7_4:54267591-54267610 None:intergenic 25.0%
! CAAATATATAGTTGATTGGT+AGG + chr7_4:54267960-54267979 Msa1163180:three_prime_UTR 25.0%
!!! TGGTTTTGGTCTTAAATTAT+CGG + chr7_4:54268135-54268154 Msa1163180:three_prime_UTR 25.0%
! ATTAGATAAGAGTGTGGTTA+TGG - chr7_4:54262838-54262857 None:intergenic 30.0%
CATTAGATTAGATAAGAGTG+TGG - chr7_4:54262844-54262863 None:intergenic 30.0%
CACACTCTTATCTAATCTAA+TGG + chr7_4:54262842-54262861 Msa1163180:exon 30.0%
GTTGATGTTATAGTCAATTG+CGG + chr7_4:54263174-54263193 Msa1163180:CDS 30.0%
ACATAATTACTTTGACAGCA+AGG - chr7_4:54263302-54263321 None:intergenic 30.0%
AATCATCTTCCTCAAAACAA+TGG - chr7_4:54263940-54263959 None:intergenic 30.0%
! CTTGATGTTGGTATTTTCAT+GGG - chr7_4:54264217-54264236 None:intergenic 30.0%
! TCTTGATGTTGGTATTTTCA+TGG - chr7_4:54264218-54264237 None:intergenic 30.0%
GAATTTCAAAAAACCTGACA+AGG - chr7_4:54264242-54264261 None:intergenic 30.0%
CTAAAATAGATGCTATGTTC+AGG + chr7_4:54264305-54264324 Msa1163180:intron 30.0%
AATTCAAGCAATTCAACAAG+AGG - chr7_4:54264349-54264368 None:intergenic 30.0%
GCTTGAATTCAATGATACAA+AGG + chr7_4:54264360-54264379 Msa1163180:CDS 30.0%
TTCCTCAATACATTATGAAG+CGG + chr7_4:54264575-54264594 Msa1163180:CDS 30.0%
TTAAAACAATCCATAGGACT+AGG + chr7_4:54264826-54264845 Msa1163180:intron 30.0%
!! AATTGGTCAATTTGCTACAA+CGG + chr7_4:54265000-54265019 Msa1163180:CDS 30.0%
ACTTAAGCATCTCAATTAAG+GGG - chr7_4:54265159-54265178 None:intergenic 30.0%
GACTTAAGCATCTCAATTAA+GGG - chr7_4:54265160-54265179 None:intergenic 30.0%
AGACTTAAGCATCTCAATTA+AGG - chr7_4:54265161-54265180 None:intergenic 30.0%
! AAATGTCAACTTTTGCACTT+GGG + chr7_4:54265200-54265219 Msa1163180:CDS 30.0%
TAGTTTCCTTGTTCTTTACT+CGG + chr7_4:54265462-54265481 Msa1163180:intron 30.0%
CAGGCATCAATGATTAATAA+AGG - chr7_4:54265505-54265524 None:intergenic 30.0%
CTTTATTAATCATTGATGCC+TGG + chr7_4:54265503-54265522 Msa1163180:intron 30.0%
CAATGTTGCGGTTATAATTA+AGG + chr7_4:54265566-54265585 Msa1163180:CDS 30.0%
GTGTAACAAAGACGTTAAAA+AGG + chr7_4:54265819-54265838 Msa1163180:CDS 30.0%
AACAAAGACGTTAAAAAGGT+TGG + chr7_4:54265823-54265842 Msa1163180:CDS 30.0%
ATTGAGTAGGCTGATAAATT+GGG - chr7_4:54265880-54265899 None:intergenic 30.0%
!! TATAGTTTTACGATCATCAG+GGG - chr7_4:54266046-54266065 None:intergenic 30.0%
ACATAAAACGCAAAATACCT+GGG - chr7_4:54266308-54266327 None:intergenic 30.0%
ATATATTATGGGGATGAGAA+TGG + chr7_4:54266469-54266488 Msa1163180:intron 30.0%
!!! CTTTGTTTTGTGTTGTATGT+AGG + chr7_4:54266502-54266521 Msa1163180:intron 30.0%
TGTTGTATGTAGGTTTACTT+GGG + chr7_4:54266512-54266531 Msa1163180:intron 30.0%
AATGTGACATCAGAAAGTTT+AGG - chr7_4:54266557-54266576 None:intergenic 30.0%
! GCTAATGGATGCATAAAATT+TGG - chr7_4:54266874-54266893 None:intergenic 30.0%
CTTGAACATTTGCAAAAGAA+AGG - chr7_4:54266908-54266927 None:intergenic 30.0%
TGCTATTGAAATAGGACTAA+TGG + chr7_4:54267033-54267052 Msa1163180:intron 30.0%
!! AATAGGACTAATGGATCTTT+TGG + chr7_4:54267042-54267061 Msa1163180:intron 30.0%
TGTCTTACAATGTATAATGC+AGG + chr7_4:54267090-54267109 Msa1163180:intron 30.0%
ACAATGTATAATGCAGGAAA+AGG + chr7_4:54267096-54267115 Msa1163180:intron 30.0%
! ATTCTTGTAGGATATTTCTG+TGG + chr7_4:54267458-54267477 Msa1163180:intron 30.0%
TCAGATTATCAAATTGCTTC+AGG - chr7_4:54267560-54267579 None:intergenic 30.0%
TAACATAACATACCATGGTT+TGG - chr7_4:54267586-54267605 None:intergenic 30.0%
! TTTTCTCAATCTTAACATGC+AGG + chr7_4:54267662-54267681 Msa1163180:intron 30.0%
AATAACATGAAGTACAGTTC+TGG - chr7_4:54268020-54268039 None:intergenic 30.0%
! AGATAGTTTGGTCTTTCTTT+AGG + chr7_4:54268101-54268120 Msa1163180:three_prime_UTR 30.0%
!!! TTTTGGTCTTAAATTATCGG+TGG + chr7_4:54268138-54268157 Msa1163180:three_prime_UTR 30.0%
! ATTAGATAAGAGTGTGGTTA+TGG - chr7_4:54262838-54262857 None:intergenic 30.0%
CATTAGATTAGATAAGAGTG+TGG - chr7_4:54262844-54262863 None:intergenic 30.0%
CACACTCTTATCTAATCTAA+TGG + chr7_4:54262842-54262861 Msa1163180:exon 30.0%
GTTGATGTTATAGTCAATTG+CGG + chr7_4:54263174-54263193 Msa1163180:CDS 30.0%
ACATAATTACTTTGACAGCA+AGG - chr7_4:54263302-54263321 None:intergenic 30.0%
AATCATCTTCCTCAAAACAA+TGG - chr7_4:54263940-54263959 None:intergenic 30.0%
! CTTGATGTTGGTATTTTCAT+GGG - chr7_4:54264217-54264236 None:intergenic 30.0%
! TCTTGATGTTGGTATTTTCA+TGG - chr7_4:54264218-54264237 None:intergenic 30.0%
GAATTTCAAAAAACCTGACA+AGG - chr7_4:54264242-54264261 None:intergenic 30.0%
CTAAAATAGATGCTATGTTC+AGG + chr7_4:54264305-54264324 Msa1163180:intron 30.0%
AATTCAAGCAATTCAACAAG+AGG - chr7_4:54264349-54264368 None:intergenic 30.0%
GCTTGAATTCAATGATACAA+AGG + chr7_4:54264360-54264379 Msa1163180:CDS 30.0%
TTCCTCAATACATTATGAAG+CGG + chr7_4:54264575-54264594 Msa1163180:CDS 30.0%
TTAAAACAATCCATAGGACT+AGG + chr7_4:54264826-54264845 Msa1163180:intron 30.0%
!! AATTGGTCAATTTGCTACAA+CGG + chr7_4:54265000-54265019 Msa1163180:CDS 30.0%
ACTTAAGCATCTCAATTAAG+GGG - chr7_4:54265159-54265178 None:intergenic 30.0%
GACTTAAGCATCTCAATTAA+GGG - chr7_4:54265160-54265179 None:intergenic 30.0%
AGACTTAAGCATCTCAATTA+AGG - chr7_4:54265161-54265180 None:intergenic 30.0%
! AAATGTCAACTTTTGCACTT+GGG + chr7_4:54265200-54265219 Msa1163180:CDS 30.0%
TAGTTTCCTTGTTCTTTACT+CGG + chr7_4:54265462-54265481 Msa1163180:intron 30.0%
CAGGCATCAATGATTAATAA+AGG - chr7_4:54265505-54265524 None:intergenic 30.0%
CTTTATTAATCATTGATGCC+TGG + chr7_4:54265503-54265522 Msa1163180:intron 30.0%
CAATGTTGCGGTTATAATTA+AGG + chr7_4:54265566-54265585 Msa1163180:CDS 30.0%
GTGTAACAAAGACGTTAAAA+AGG + chr7_4:54265819-54265838 Msa1163180:CDS 30.0%
AACAAAGACGTTAAAAAGGT+TGG + chr7_4:54265823-54265842 Msa1163180:CDS 30.0%
ATTGAGTAGGCTGATAAATT+GGG - chr7_4:54265880-54265899 None:intergenic 30.0%
!! TATAGTTTTACGATCATCAG+GGG - chr7_4:54266046-54266065 None:intergenic 30.0%
ACATAAAACGCAAAATACCT+GGG - chr7_4:54266308-54266327 None:intergenic 30.0%
ATATATTATGGGGATGAGAA+TGG + chr7_4:54266469-54266488 Msa1163180:intron 30.0%
!!! CTTTGTTTTGTGTTGTATGT+AGG + chr7_4:54266502-54266521 Msa1163180:intron 30.0%
TGTTGTATGTAGGTTTACTT+GGG + chr7_4:54266512-54266531 Msa1163180:intron 30.0%
AATGTGACATCAGAAAGTTT+AGG - chr7_4:54266557-54266576 None:intergenic 30.0%
! GCTAATGGATGCATAAAATT+TGG - chr7_4:54266874-54266893 None:intergenic 30.0%
CTTGAACATTTGCAAAAGAA+AGG - chr7_4:54266908-54266927 None:intergenic 30.0%
TGCTATTGAAATAGGACTAA+TGG + chr7_4:54267033-54267052 Msa1163180:intron 30.0%
!! AATAGGACTAATGGATCTTT+TGG + chr7_4:54267042-54267061 Msa1163180:intron 30.0%
TGTCTTACAATGTATAATGC+AGG + chr7_4:54267090-54267109 Msa1163180:intron 30.0%
ACAATGTATAATGCAGGAAA+AGG + chr7_4:54267096-54267115 Msa1163180:intron 30.0%
! ATTCTTGTAGGATATTTCTG+TGG + chr7_4:54267458-54267477 Msa1163180:intron 30.0%
TCAGATTATCAAATTGCTTC+AGG - chr7_4:54267560-54267579 None:intergenic 30.0%
TAACATAACATACCATGGTT+TGG - chr7_4:54267586-54267605 None:intergenic 30.0%
! TTTTCTCAATCTTAACATGC+AGG + chr7_4:54267662-54267681 Msa1163180:intron 30.0%
AATAACATGAAGTACAGTTC+TGG - chr7_4:54268020-54268039 None:intergenic 30.0%
! AGATAGTTTGGTCTTTCTTT+AGG + chr7_4:54268101-54268120 Msa1163180:three_prime_UTR 30.0%
!!! TTTTGGTCTTAAATTATCGG+TGG + chr7_4:54268138-54268157 Msa1163180:three_prime_UTR 30.0%
GTTTGAAGAGAAAACTCGAT+TGG + chr7_4:54262886-54262905 Msa1163180:CDS 35.0%
TTGGACTGAAGAAGATGAAA+TGG + chr7_4:54262905-54262924 Msa1163180:CDS 35.0%
TTCCCACTGATATTTCCAAT+CGG + chr7_4:54262961-54262980 Msa1163180:CDS 35.0%
ATCCGATTGGAAATATCAGT+GGG - chr7_4:54262966-54262985 None:intergenic 35.0%
AATCCGATTGGAAATATCAG+TGG - chr7_4:54262967-54262986 None:intergenic 35.0%
TTTGAGAAGATGAATCCGAT+TGG - chr7_4:54262979-54262998 None:intergenic 35.0%
TGAACGAGAAGATGAAAAAG+CGG - chr7_4:54263003-54263022 None:intergenic 35.0%
! CATTTCTGAAAAAGTGTACG+TGG + chr7_4:54263429-54263448 Msa1163180:intron 35.0%
GAAATTAATCAGGTCAAGTC+TGG + chr7_4:54263602-54263621 Msa1163180:intron 35.0%
! GATCAGCGACAATAATTTTC+TGG + chr7_4:54263733-54263752 Msa1163180:intron 35.0%
GAAATGGAATGCACAATTCA+TGG - chr7_4:54263883-54263902 None:intergenic 35.0%
CAGAAGGTCTAACATTGAAA+TGG - chr7_4:54263899-54263918 None:intergenic 35.0%
CTTTAACAACTCTACGAGAT+AGG - chr7_4:54264115-54264134 None:intergenic 35.0%
! TGAGAAATTACAGGGCTTTT+GGG - chr7_4:54264141-54264160 None:intergenic 35.0%
! TTGAGAAATTACAGGGCTTT+TGG - chr7_4:54264142-54264161 None:intergenic 35.0%
ACAGTGCTTGAGAAATTACA+GGG - chr7_4:54264149-54264168 None:intergenic 35.0%
AACAGTGCTTGAGAAATTAC+AGG - chr7_4:54264150-54264169 None:intergenic 35.0%
!! ATTTCTCAAGCACTGTTTTC+TGG + chr7_4:54264153-54264172 Msa1163180:CDS 35.0%
! AGCATACATATCTAAGGTGT+TGG - chr7_4:54264264-54264283 None:intergenic 35.0%
AATAGATGCTATGTTCAGGT+TGG + chr7_4:54264309-54264328 Msa1163180:intron 35.0%
AAACGCTGAGAACAAAAATC+AGG + chr7_4:54264426-54264445 Msa1163180:CDS 35.0%
AACCGCTTCATAATGTATTG+AGG - chr7_4:54264580-54264599 None:intergenic 35.0%
AGAACCTCTCTCTTAATTTC+TGG - chr7_4:54264735-54264754 None:intergenic 35.0%
AATTAAGAGAGAGGTTCTTC+TGG + chr7_4:54264737-54264756 Msa1163180:CDS 35.0%
AATCACATTTCCTAGTCCTA+TGG - chr7_4:54264839-54264858 None:intergenic 35.0%
TTAAAAGAGCTGCTTCTCTT+CGG - chr7_4:54264982-54265001 None:intergenic 35.0%
! AGAGAAGCAGCTCTTTTAAT+TGG + chr7_4:54264983-54265002 Msa1163180:CDS 35.0%
CTCTTATTGATCCTCATTCT+TGG + chr7_4:54265095-54265114 Msa1163180:intron 35.0%
AGTCTTCTGATTTACAGCTT+AGG + chr7_4:54265176-54265195 Msa1163180:CDS 35.0%
GTCTTCTGATTTACAGCTTA+GGG + chr7_4:54265177-54265196 Msa1163180:CDS 35.0%
! GAAATGTCAACTTTTGCACT+TGG + chr7_4:54265199-54265218 Msa1163180:CDS 35.0%
CAAGCTGGTATTGCTTATAA+CGG + chr7_4:54265338-54265357 Msa1163180:CDS 35.0%
GATCTTCTTGACACAAAGAA+TGG + chr7_4:54265380-54265399 Msa1163180:CDS 35.0%
ATACAAAGCAGTTATGTCAG+AGG - chr7_4:54265539-54265558 None:intergenic 35.0%
ACATAACTGCTTTGTATGAC+AGG + chr7_4:54265542-54265561 Msa1163180:intron 35.0%
! GGTTTTCAAAAACTGCATGA+TGG + chr7_4:54265594-54265613 Msa1163180:CDS 35.0%
TTTGTTACACACTCTTGAGT+AGG - chr7_4:54265809-54265828 None:intergenic 35.0%
GATTGAGTAGGCTGATAAAT+TGG - chr7_4:54265881-54265900 None:intergenic 35.0%
CAATAGTACAAGGATTGAGT+AGG - chr7_4:54265893-54265912 None:intergenic 35.0%
! TCTATCAATTCCTCTTTTGC+AGG + chr7_4:54265936-54265955 Msa1163180:intron 35.0%
ATGTTATATCTTATGCGCAC+TGG + chr7_4:54265970-54265989 Msa1163180:CDS 35.0%
TGTTATATCTTATGCGCACT+GGG + chr7_4:54265971-54265990 Msa1163180:CDS 35.0%
! ATACTTTCTAAGTACTGCCA+GGG - chr7_4:54266121-54266140 None:intergenic 35.0%
! AATACTTTCTAAGTACTGCC+AGG - chr7_4:54266122-54266141 None:intergenic 35.0%
! CACTATGCTGCTAAATTTTC+AGG + chr7_4:54266148-54266167 Msa1163180:intron 35.0%
CATAAAACGCAAAATACCTG+GGG - chr7_4:54266307-54266326 None:intergenic 35.0%
GACATAAAACGCAAAATACC+TGG - chr7_4:54266309-54266328 None:intergenic 35.0%
! TTTGCGTTTTATGTCTCCAA+TGG + chr7_4:54266314-54266333 Msa1163180:intron 35.0%
! TTGCGTTTTATGTCTCCAAT+GGG + chr7_4:54266315-54266334 Msa1163180:intron 35.0%
GTGTTGTATGTAGGTTTACT+TGG + chr7_4:54266511-54266530 Msa1163180:intron 35.0%
GATGTCACATTCATAGTTGA+AGG + chr7_4:54266566-54266585 Msa1163180:CDS 35.0%
! AGAAGCTTTTGCCTGAAAAA+GGG - chr7_4:54266688-54266707 None:intergenic 35.0%
! TAGAAGCTTTTGCCTGAAAA+AGG - chr7_4:54266689-54266708 None:intergenic 35.0%
ACATTTCGTGCAATGTTTGA+TGG + chr7_4:54266743-54266762 Msa1163180:CDS 35.0%
CATTTCGTGCAATGTTTGAT+GGG + chr7_4:54266744-54266763 Msa1163180:CDS 35.0%
ATTTCGTGCAATGTTTGATG+GGG + chr7_4:54266745-54266764 Msa1163180:CDS 35.0%
! AATTTTATGTATCCTGGCAC+TGG + chr7_4:54266816-54266835 Msa1163180:intron 35.0%
TCTTACACTTAAAACGTTCC+TGG + chr7_4:54266839-54266858 Msa1163180:intron 35.0%
GATGCATAAAATTTGGAAGC+CGG - chr7_4:54266867-54266886 None:intergenic 35.0%
! AAGGTACTAGTTACAGCTAA+TGG - chr7_4:54266889-54266908 None:intergenic 35.0%
! ACATTTTCCACAATGCATGT+GGG - chr7_4:54267002-54267021 None:intergenic 35.0%
!! AGCCTCTTTGCTATTGAAAT+AGG + chr7_4:54267025-54267044 Msa1163180:intron 35.0%
GTCCTATTTCAATAGCAAAG+AGG - chr7_4:54267030-54267049 None:intergenic 35.0%
!! ATGTCTTTGAGTTGATGATG+AGG + chr7_4:54267155-54267174 Msa1163180:CDS 35.0%
!!! GAGTTGATGATGAGGTATTT+TGG + chr7_4:54267163-54267182 Msa1163180:intron 35.0%
! TGGAGCAGTAGATATTGATT+TGG + chr7_4:54267277-54267296 Msa1163180:CDS 35.0%
!! TATTGATTTGGATCTTGCTC+CGG + chr7_4:54267289-54267308 Msa1163180:CDS 35.0%
GATATTGATCTGCAGCTTTA+AGG - chr7_4:54267319-54267338 None:intergenic 35.0%
GCAGATCAATATCTTCTTGA+TGG + chr7_4:54267326-54267345 Msa1163180:CDS 35.0%
!! TTGCGAATATGCTATTTCTG+AGG + chr7_4:54267361-54267380 Msa1163180:CDS 35.0%
!! GAATATGCTATTTCTGAGGT+AGG + chr7_4:54267365-54267384 Msa1163180:intron 35.0%
ATAATCTGAGTACCAAACCA+TGG + chr7_4:54267571-54267590 Msa1163180:CDS 35.0%
GAGAAGAATTTGTGAATGTC+TGG - chr7_4:54267715-54267734 None:intergenic 35.0%
GCGCAGAGATTAAAAATCTA+AGG - chr7_4:54267787-54267806 None:intergenic 35.0%
TATACAAGTAACACAGTACC+AGG - chr7_4:54268265-54268284 None:intergenic 35.0%
GTTTGAAGAGAAAACTCGAT+TGG + chr7_4:54262886-54262905 Msa1163180:CDS 35.0%
TTGGACTGAAGAAGATGAAA+TGG + chr7_4:54262905-54262924 Msa1163180:CDS 35.0%
TTCCCACTGATATTTCCAAT+CGG + chr7_4:54262961-54262980 Msa1163180:CDS 35.0%
ATCCGATTGGAAATATCAGT+GGG - chr7_4:54262966-54262985 None:intergenic 35.0%
AATCCGATTGGAAATATCAG+TGG - chr7_4:54262967-54262986 None:intergenic 35.0%
TTTGAGAAGATGAATCCGAT+TGG - chr7_4:54262979-54262998 None:intergenic 35.0%
TGAACGAGAAGATGAAAAAG+CGG - chr7_4:54263003-54263022 None:intergenic 35.0%
! CATTTCTGAAAAAGTGTACG+TGG + chr7_4:54263429-54263448 Msa1163180:intron 35.0%
GAAATTAATCAGGTCAAGTC+TGG + chr7_4:54263602-54263621 Msa1163180:intron 35.0%
! GATCAGCGACAATAATTTTC+TGG + chr7_4:54263733-54263752 Msa1163180:intron 35.0%
GAAATGGAATGCACAATTCA+TGG - chr7_4:54263883-54263902 None:intergenic 35.0%
CAGAAGGTCTAACATTGAAA+TGG - chr7_4:54263899-54263918 None:intergenic 35.0%
CTTTAACAACTCTACGAGAT+AGG - chr7_4:54264115-54264134 None:intergenic 35.0%
! TGAGAAATTACAGGGCTTTT+GGG - chr7_4:54264141-54264160 None:intergenic 35.0%
! TTGAGAAATTACAGGGCTTT+TGG - chr7_4:54264142-54264161 None:intergenic 35.0%
ACAGTGCTTGAGAAATTACA+GGG - chr7_4:54264149-54264168 None:intergenic 35.0%
AACAGTGCTTGAGAAATTAC+AGG - chr7_4:54264150-54264169 None:intergenic 35.0%
!! ATTTCTCAAGCACTGTTTTC+TGG + chr7_4:54264153-54264172 Msa1163180:CDS 35.0%
! AGCATACATATCTAAGGTGT+TGG - chr7_4:54264264-54264283 None:intergenic 35.0%
AATAGATGCTATGTTCAGGT+TGG + chr7_4:54264309-54264328 Msa1163180:intron 35.0%
AAACGCTGAGAACAAAAATC+AGG + chr7_4:54264426-54264445 Msa1163180:CDS 35.0%
AACCGCTTCATAATGTATTG+AGG - chr7_4:54264580-54264599 None:intergenic 35.0%
AGAACCTCTCTCTTAATTTC+TGG - chr7_4:54264735-54264754 None:intergenic 35.0%
AATTAAGAGAGAGGTTCTTC+TGG + chr7_4:54264737-54264756 Msa1163180:CDS 35.0%
AATCACATTTCCTAGTCCTA+TGG - chr7_4:54264839-54264858 None:intergenic 35.0%
TTAAAAGAGCTGCTTCTCTT+CGG - chr7_4:54264982-54265001 None:intergenic 35.0%
! AGAGAAGCAGCTCTTTTAAT+TGG + chr7_4:54264983-54265002 Msa1163180:CDS 35.0%
CTCTTATTGATCCTCATTCT+TGG + chr7_4:54265095-54265114 Msa1163180:intron 35.0%
AGTCTTCTGATTTACAGCTT+AGG + chr7_4:54265176-54265195 Msa1163180:CDS 35.0%
GTCTTCTGATTTACAGCTTA+GGG + chr7_4:54265177-54265196 Msa1163180:CDS 35.0%
! GAAATGTCAACTTTTGCACT+TGG + chr7_4:54265199-54265218 Msa1163180:CDS 35.0%
CAAGCTGGTATTGCTTATAA+CGG + chr7_4:54265338-54265357 Msa1163180:CDS 35.0%
GATCTTCTTGACACAAAGAA+TGG + chr7_4:54265380-54265399 Msa1163180:CDS 35.0%
ATACAAAGCAGTTATGTCAG+AGG - chr7_4:54265539-54265558 None:intergenic 35.0%
ACATAACTGCTTTGTATGAC+AGG + chr7_4:54265542-54265561 Msa1163180:intron 35.0%
! GGTTTTCAAAAACTGCATGA+TGG + chr7_4:54265594-54265613 Msa1163180:CDS 35.0%
TTTGTTACACACTCTTGAGT+AGG - chr7_4:54265809-54265828 None:intergenic 35.0%
GATTGAGTAGGCTGATAAAT+TGG - chr7_4:54265881-54265900 None:intergenic 35.0%
CAATAGTACAAGGATTGAGT+AGG - chr7_4:54265893-54265912 None:intergenic 35.0%
! TCTATCAATTCCTCTTTTGC+AGG + chr7_4:54265936-54265955 Msa1163180:intron 35.0%
ATGTTATATCTTATGCGCAC+TGG + chr7_4:54265970-54265989 Msa1163180:CDS 35.0%
TGTTATATCTTATGCGCACT+GGG + chr7_4:54265971-54265990 Msa1163180:CDS 35.0%
! ATACTTTCTAAGTACTGCCA+GGG - chr7_4:54266121-54266140 None:intergenic 35.0%
! AATACTTTCTAAGTACTGCC+AGG - chr7_4:54266122-54266141 None:intergenic 35.0%
! CACTATGCTGCTAAATTTTC+AGG + chr7_4:54266148-54266167 Msa1163180:intron 35.0%
CATAAAACGCAAAATACCTG+GGG - chr7_4:54266307-54266326 None:intergenic 35.0%
GACATAAAACGCAAAATACC+TGG - chr7_4:54266309-54266328 None:intergenic 35.0%
! TTTGCGTTTTATGTCTCCAA+TGG + chr7_4:54266314-54266333 Msa1163180:intron 35.0%
! TTGCGTTTTATGTCTCCAAT+GGG + chr7_4:54266315-54266334 Msa1163180:intron 35.0%
GTGTTGTATGTAGGTTTACT+TGG + chr7_4:54266511-54266530 Msa1163180:intron 35.0%
GATGTCACATTCATAGTTGA+AGG + chr7_4:54266566-54266585 Msa1163180:CDS 35.0%
! AGAAGCTTTTGCCTGAAAAA+GGG - chr7_4:54266688-54266707 None:intergenic 35.0%
! TAGAAGCTTTTGCCTGAAAA+AGG - chr7_4:54266689-54266708 None:intergenic 35.0%
ACATTTCGTGCAATGTTTGA+TGG + chr7_4:54266743-54266762 Msa1163180:CDS 35.0%
CATTTCGTGCAATGTTTGAT+GGG + chr7_4:54266744-54266763 Msa1163180:CDS 35.0%
ATTTCGTGCAATGTTTGATG+GGG + chr7_4:54266745-54266764 Msa1163180:CDS 35.0%
! AATTTTATGTATCCTGGCAC+TGG + chr7_4:54266816-54266835 Msa1163180:intron 35.0%
TCTTACACTTAAAACGTTCC+TGG + chr7_4:54266839-54266858 Msa1163180:intron 35.0%
GATGCATAAAATTTGGAAGC+CGG - chr7_4:54266867-54266886 None:intergenic 35.0%
! AAGGTACTAGTTACAGCTAA+TGG - chr7_4:54266889-54266908 None:intergenic 35.0%
! ACATTTTCCACAATGCATGT+GGG - chr7_4:54267002-54267021 None:intergenic 35.0%
!! AGCCTCTTTGCTATTGAAAT+AGG + chr7_4:54267025-54267044 Msa1163180:intron 35.0%
GTCCTATTTCAATAGCAAAG+AGG - chr7_4:54267030-54267049 None:intergenic 35.0%
!! ATGTCTTTGAGTTGATGATG+AGG + chr7_4:54267155-54267174 Msa1163180:CDS 35.0%
!!! GAGTTGATGATGAGGTATTT+TGG + chr7_4:54267163-54267182 Msa1163180:intron 35.0%
! TGGAGCAGTAGATATTGATT+TGG + chr7_4:54267277-54267296 Msa1163180:CDS 35.0%
!! TATTGATTTGGATCTTGCTC+CGG + chr7_4:54267289-54267308 Msa1163180:CDS 35.0%
GATATTGATCTGCAGCTTTA+AGG - chr7_4:54267319-54267338 None:intergenic 35.0%
GCAGATCAATATCTTCTTGA+TGG + chr7_4:54267326-54267345 Msa1163180:CDS 35.0%
!! TTGCGAATATGCTATTTCTG+AGG + chr7_4:54267361-54267380 Msa1163180:CDS 35.0%
!! GAATATGCTATTTCTGAGGT+AGG + chr7_4:54267365-54267384 Msa1163180:intron 35.0%
ATAATCTGAGTACCAAACCA+TGG + chr7_4:54267571-54267590 Msa1163180:CDS 35.0%
GAGAAGAATTTGTGAATGTC+TGG - chr7_4:54267715-54267734 None:intergenic 35.0%
GCGCAGAGATTAAAAATCTA+AGG - chr7_4:54267787-54267806 None:intergenic 35.0%
TATACAAGTAACACAGTACC+AGG - chr7_4:54268265-54268284 None:intergenic 35.0%
! AGATAAGAGTGTGGTTATGG+TGG - chr7_4:54262835-54262854 None:intergenic 40.0%
AAGATCTAAACGACGAGGTT+TGG - chr7_4:54262943-54262962 None:intergenic 40.0%
ACAACACGGAATGACGAAAA+CGG - chr7_4:54263084-54263103 None:intergenic 40.0%
ACAGTGTTACACAGTTCAGA+AGG - chr7_4:54263915-54263934 None:intergenic 40.0%
TTCTGAACTGTGTAACACTG+TGG + chr7_4:54263914-54263933 Msa1163180:intron 40.0%
ACAATGAGTCGTTGATACTC+TGG - chr7_4:54264075-54264094 None:intergenic 40.0%
!! CACTGTTTTCTGGTCTTCTT+AGG + chr7_4:54264163-54264182 Msa1163180:CDS 40.0%
! TGTTGGTATTTTCATGGGCA+AGG - chr7_4:54264212-54264231 None:intergenic 40.0%
CAAGCAATTCAACAAGAGGA+GGG - chr7_4:54264345-54264364 None:intergenic 40.0%
TCAAGCAATTCAACAAGAGG+AGG - chr7_4:54264346-54264365 None:intergenic 40.0%
! TCAGGTACTTGATTTTTCGC+AGG + chr7_4:54264444-54264463 Msa1163180:intron 40.0%
! TTTTTCGCAGGAACTTACCA+CGG + chr7_4:54264456-54264475 Msa1163180:intron 40.0%
TATACCAAAAGAATCCACCG+TGG - chr7_4:54264476-54264495 None:intergenic 40.0%
CCAAGCATTAGTACAAGAGT+TGG - chr7_4:54264546-54264565 None:intergenic 40.0%
CCAACTCTTGTACTAATGCT+TGG + chr7_4:54264543-54264562 Msa1163180:CDS 40.0%
! TTCAGCTTGTTCTTGTAGCT+TGG - chr7_4:54264658-54264677 None:intergenic 40.0%
!!! ATGAGCCGCCTTTTTTTTGT+AGG + chr7_4:54264677-54264696 Msa1163180:intron 40.0%
GCCAACCTACAAAAAAAAGG+CGG - chr7_4:54264685-54264704 None:intergenic 40.0%
CACGCCAACCTACAAAAAAA+AGG - chr7_4:54264688-54264707 None:intergenic 40.0%
!! TTTTTGTAGGTTGGCGTGAT+TGG + chr7_4:54264690-54264709 Msa1163180:intron 40.0%
!! TCTTAATTTCTGGCGAAGAG+TGG - chr7_4:54264725-54264744 None:intergenic 40.0%
TTCGCCAGAAATTAAGAGAG+AGG + chr7_4:54264728-54264747 Msa1163180:CDS 40.0%
! AGCCTGTTATTTGCTTACTG+AGG + chr7_4:54264772-54264791 Msa1163180:CDS 40.0%
CACCTCAGTAAGCAAATAAC+AGG - chr7_4:54264777-54264796 None:intergenic 40.0%
! TACAACGGATTCAGATTGCA+AGG + chr7_4:54265015-54265034 Msa1163180:CDS 40.0%
TGTGATATGCTTGTCATGTG+TGG + chr7_4:54265068-54265087 Msa1163180:intron 40.0%
ATCTGCATGAACCAAGAATG+AGG - chr7_4:54265109-54265128 None:intergenic 40.0%
ACCAGTATTTATCTGCATGC+AGG + chr7_4:54265252-54265271 Msa1163180:intron 40.0%
AAAAGCTGCGTTGTGTTGAA+CGG - chr7_4:54265408-54265427 None:intergenic 40.0%
TGTATGACAGGACAATGTTG+CGG + chr7_4:54265554-54265573 Msa1163180:intron 40.0%
GTTGCGGTTATAATTAAGGC+TGG + chr7_4:54265570-54265589 Msa1163180:CDS 40.0%
TGTTTCAGTACCTGCAAAAG+AGG - chr7_4:54265949-54265968 None:intergenic 40.0%
GTTATATCTTATGCGCACTG+GGG + chr7_4:54265972-54265991 Msa1163180:CDS 40.0%
! TCTGCTTTGGGTTTGTAGAT+TGG - chr7_4:54266198-54266217 None:intergenic 40.0%
TCTACAAACCCAAAGCAGAA+AGG + chr7_4:54266199-54266218 Msa1163180:CDS 40.0%
ACTAGATGTGATGATCCCAT+TGG - chr7_4:54266333-54266352 None:intergenic 40.0%
TGGGATCATCACATCTAGTT+TGG + chr7_4:54266334-54266353 Msa1163180:intron 40.0%
TTTCGTGCAATGTTTGATGG+GGG + chr7_4:54266746-54266765 Msa1163180:CDS 40.0%
! CATTTTCCACAATGCATGTG+GGG - chr7_4:54267001-54267020 None:intergenic 40.0%
! CACATTTTCCACAATGCATG+TGG - chr7_4:54267003-54267022 None:intergenic 40.0%
!! ATTGATCTGCAGCTTTAAGG+AGG - chr7_4:54267316-54267335 None:intergenic 40.0%
GAGTATGCACGCATATCTTA+AGG - chr7_4:54267532-54267551 None:intergenic 40.0%
TCTTCTTACTCACCCTCATT+TGG + chr7_4:54267738-54267757 Msa1163180:CDS 40.0%
GGCTGAGTATCAAGATAGTT+TGG + chr7_4:54268089-54268108 Msa1163180:three_prime_UTR 40.0%
TTCTTTAGGCTTGAGAATGC+TGG + chr7_4:54268115-54268134 Msa1163180:three_prime_UTR 40.0%
! TACCCAAGTGTTGTTACTCT+TGG + chr7_4:54268212-54268231 Msa1163180:three_prime_UTR 40.0%
! ACCCAAGTGTTGTTACTCTT+GGG + chr7_4:54268213-54268232 Msa1163180:three_prime_UTR 40.0%
ACCCAAGAGTAACAACACTT+GGG - chr7_4:54268217-54268236 None:intergenic 40.0%
AACCCAAGAGTAACAACACT+TGG - chr7_4:54268218-54268237 None:intergenic 40.0%
! AGATAAGAGTGTGGTTATGG+TGG - chr7_4:54262835-54262854 None:intergenic 40.0%
AAGATCTAAACGACGAGGTT+TGG - chr7_4:54262943-54262962 None:intergenic 40.0%
ACAACACGGAATGACGAAAA+CGG - chr7_4:54263084-54263103 None:intergenic 40.0%
ACAGTGTTACACAGTTCAGA+AGG - chr7_4:54263915-54263934 None:intergenic 40.0%
TTCTGAACTGTGTAACACTG+TGG + chr7_4:54263914-54263933 Msa1163180:intron 40.0%
ACAATGAGTCGTTGATACTC+TGG - chr7_4:54264075-54264094 None:intergenic 40.0%
!! CACTGTTTTCTGGTCTTCTT+AGG + chr7_4:54264163-54264182 Msa1163180:CDS 40.0%
! TGTTGGTATTTTCATGGGCA+AGG - chr7_4:54264212-54264231 None:intergenic 40.0%
CAAGCAATTCAACAAGAGGA+GGG - chr7_4:54264345-54264364 None:intergenic 40.0%
TCAAGCAATTCAACAAGAGG+AGG - chr7_4:54264346-54264365 None:intergenic 40.0%
! TCAGGTACTTGATTTTTCGC+AGG + chr7_4:54264444-54264463 Msa1163180:intron 40.0%
! TTTTTCGCAGGAACTTACCA+CGG + chr7_4:54264456-54264475 Msa1163180:intron 40.0%
TATACCAAAAGAATCCACCG+TGG - chr7_4:54264476-54264495 None:intergenic 40.0%
CCAAGCATTAGTACAAGAGT+TGG - chr7_4:54264546-54264565 None:intergenic 40.0%
CCAACTCTTGTACTAATGCT+TGG + chr7_4:54264543-54264562 Msa1163180:CDS 40.0%
! TTCAGCTTGTTCTTGTAGCT+TGG - chr7_4:54264658-54264677 None:intergenic 40.0%
!!! ATGAGCCGCCTTTTTTTTGT+AGG + chr7_4:54264677-54264696 Msa1163180:intron 40.0%
GCCAACCTACAAAAAAAAGG+CGG - chr7_4:54264685-54264704 None:intergenic 40.0%
CACGCCAACCTACAAAAAAA+AGG - chr7_4:54264688-54264707 None:intergenic 40.0%
!! TTTTTGTAGGTTGGCGTGAT+TGG + chr7_4:54264690-54264709 Msa1163180:intron 40.0%
!! TCTTAATTTCTGGCGAAGAG+TGG - chr7_4:54264725-54264744 None:intergenic 40.0%
TTCGCCAGAAATTAAGAGAG+AGG + chr7_4:54264728-54264747 Msa1163180:CDS 40.0%
! AGCCTGTTATTTGCTTACTG+AGG + chr7_4:54264772-54264791 Msa1163180:CDS 40.0%
CACCTCAGTAAGCAAATAAC+AGG - chr7_4:54264777-54264796 None:intergenic 40.0%
! TACAACGGATTCAGATTGCA+AGG + chr7_4:54265015-54265034 Msa1163180:CDS 40.0%
TGTGATATGCTTGTCATGTG+TGG + chr7_4:54265068-54265087 Msa1163180:intron 40.0%
ATCTGCATGAACCAAGAATG+AGG - chr7_4:54265109-54265128 None:intergenic 40.0%
ACCAGTATTTATCTGCATGC+AGG + chr7_4:54265252-54265271 Msa1163180:intron 40.0%
AAAAGCTGCGTTGTGTTGAA+CGG - chr7_4:54265408-54265427 None:intergenic 40.0%
TGTATGACAGGACAATGTTG+CGG + chr7_4:54265554-54265573 Msa1163180:intron 40.0%
GTTGCGGTTATAATTAAGGC+TGG + chr7_4:54265570-54265589 Msa1163180:CDS 40.0%
TGTTTCAGTACCTGCAAAAG+AGG - chr7_4:54265949-54265968 None:intergenic 40.0%
GTTATATCTTATGCGCACTG+GGG + chr7_4:54265972-54265991 Msa1163180:CDS 40.0%
! TCTGCTTTGGGTTTGTAGAT+TGG - chr7_4:54266198-54266217 None:intergenic 40.0%
TCTACAAACCCAAAGCAGAA+AGG + chr7_4:54266199-54266218 Msa1163180:CDS 40.0%
ACTAGATGTGATGATCCCAT+TGG - chr7_4:54266333-54266352 None:intergenic 40.0%
TGGGATCATCACATCTAGTT+TGG + chr7_4:54266334-54266353 Msa1163180:intron 40.0%
TTTCGTGCAATGTTTGATGG+GGG + chr7_4:54266746-54266765 Msa1163180:CDS 40.0%
! CATTTTCCACAATGCATGTG+GGG - chr7_4:54267001-54267020 None:intergenic 40.0%
! CACATTTTCCACAATGCATG+TGG - chr7_4:54267003-54267022 None:intergenic 40.0%
!! ATTGATCTGCAGCTTTAAGG+AGG - chr7_4:54267316-54267335 None:intergenic 40.0%
GAGTATGCACGCATATCTTA+AGG - chr7_4:54267532-54267551 None:intergenic 40.0%
TCTTCTTACTCACCCTCATT+TGG + chr7_4:54267738-54267757 Msa1163180:CDS 40.0%
GGCTGAGTATCAAGATAGTT+TGG + chr7_4:54268089-54268108 Msa1163180:three_prime_UTR 40.0%
TTCTTTAGGCTTGAGAATGC+TGG + chr7_4:54268115-54268134 Msa1163180:three_prime_UTR 40.0%
! TACCCAAGTGTTGTTACTCT+TGG + chr7_4:54268212-54268231 Msa1163180:three_prime_UTR 40.0%
! ACCCAAGTGTTGTTACTCTT+GGG + chr7_4:54268213-54268232 Msa1163180:three_prime_UTR 40.0%
ACCCAAGAGTAACAACACTT+GGG - chr7_4:54268217-54268236 None:intergenic 40.0%
AACCCAAGAGTAACAACACT+TGG - chr7_4:54268218-54268237 None:intergenic 40.0%
! TAAGAGTGTGGTTATGGTGG+TGG - chr7_4:54262832-54262851 None:intergenic 45.0%
AGAATCGGCATCACAATCTC+CGG - chr7_4:54263235-54263254 None:intergenic 45.0%
! AAGGAGTGTGCGTTTATCCT+TGG + chr7_4:54263273-54263292 Msa1163180:CDS 45.0%
!! ACACTGTGGCCATTGTTTTG+AGG + chr7_4:54263928-54263947 Msa1163180:intron 45.0%
CAACGACTCATTGTTGATGC+TGG + chr7_4:54264081-54264100 Msa1163180:CDS 45.0%
CAACTCTACGAGATAGGACA+AGG - chr7_4:54264109-54264128 None:intergenic 45.0%
!! GATGCTATGTTCAGGTTGGA+CGG + chr7_4:54264313-54264332 Msa1163180:intron 45.0%
!! CTTACCACGGTGGATTCTTT+TGG + chr7_4:54264469-54264488 Msa1163180:intron 45.0%
!!! GCCGCCTTTTTTTTGTAGGT+TGG + chr7_4:54264681-54264700 Msa1163180:intron 45.0%
CAGATTCACATTGCCCAAAG+AGG + chr7_4:54265124-54265143 Msa1163180:intron 45.0%
! TGTCAACTTTTGCACTTGGG+AGG + chr7_4:54265203-54265222 Msa1163180:CDS 45.0%
! AACTTTTGCACTTGGGAGGT+TGG + chr7_4:54265207-54265226 Msa1163180:CDS 45.0%
GCCTGCATGCAGATAAATAC+TGG - chr7_4:54265256-54265275 None:intergenic 45.0%
TAGGACTCACACAATCAAGC+TGG + chr7_4:54265323-54265342 Msa1163180:intron 45.0%
GCTGGTATTGCTTATAACGG+TGG + chr7_4:54265341-54265360 Msa1163180:CDS 45.0%
GTGTCAAGAAGATCAAGCAG+AGG - chr7_4:54265374-54265393 None:intergenic 45.0%
! AACGCAGCTTTTGCTCTCTA+TGG + chr7_4:54265416-54265435 Msa1163180:CDS 45.0%
! AGCTTTTGCTCTCTATGGTC+TGG + chr7_4:54265421-54265440 Msa1163180:CDS 45.0%
! CTATGGTCTGGCTGATAATG+AGG + chr7_4:54265433-54265452 Msa1163180:CDS 45.0%
TGCTGACCGAGTAAAGAACA+AGG - chr7_4:54265471-54265490 None:intergenic 45.0%
TACTCGGTCAGCATAGTATG+TGG + chr7_4:54265478-54265497 Msa1163180:intron 45.0%
GCGGTTATAATTAAGGCTGG+TGG + chr7_4:54265573-54265592 Msa1163180:CDS 45.0%
AGGTTGGAAGAGAAGATGCA+AGG + chr7_4:54265839-54265858 Msa1163180:CDS 45.0%
GGTTGGAAGAGAAGATGCAA+GGG + chr7_4:54265840-54265859 Msa1163180:CDS 45.0%
!!! ACTTTTTTTGTCCACCTCCC+TGG + chr7_4:54266101-54266120 Msa1163180:intron 45.0%
AAGCGTCACCTTTCTGCTTT+GGG - chr7_4:54266210-54266229 None:intergenic 45.0%
GCTTCACACAATGGCTATGA+AGG + chr7_4:54266237-54266256 Msa1163180:CDS 45.0%
AGGAGCAGGATCAACAATAG+AGG - chr7_4:54266272-54266291 None:intergenic 45.0%
! CAGTCTGTTCTCCCTTTTTC+AGG + chr7_4:54266674-54266693 Msa1163180:intron 45.0%
CAATGTTTGATGGGGGCTAT+CGG + chr7_4:54266753-54266772 Msa1163180:CDS 45.0%
AATGTTTGATGGGGGCTATC+GGG + chr7_4:54266754-54266773 Msa1163180:CDS 45.0%
TTAAGTGTAAGACCAGTGCC+AGG - chr7_4:54266831-54266850 None:intergenic 45.0%
ACTTAAAACGTTCCTGGCAC+CGG + chr7_4:54266845-54266864 Msa1163180:intron 45.0%
! TGTGATGGAAGTTCTGTGCT+TGG + chr7_4:54266940-54266959 Msa1163180:intron 45.0%
CTGTGCTTGGCGTCTTTAAT+AGG + chr7_4:54266953-54266972 Msa1163180:intron 45.0%
GGCGTCTTTAATAGGCTAAG+TGG + chr7_4:54266961-54266980 Msa1163180:intron 45.0%
AGCACGAGTTAGCCAAATGA+GGG - chr7_4:54267753-54267772 None:intergenic 45.0%
TAGCTTCTGTCCAATTGCAC+AGG + chr7_4:54267914-54267933 Msa1163180:three_prime_UTR 45.0%
!!! AGGCTTGAGAATGCTGGTTT+TGG + chr7_4:54268121-54268140 Msa1163180:three_prime_UTR 45.0%
TACATAACAAGCTGCTAGCC+TGG + chr7_4:54268244-54268263 Msa1163180:three_prime_UTR 45.0%
! TAAGAGTGTGGTTATGGTGG+TGG - chr7_4:54262832-54262851 None:intergenic 45.0%
AGAATCGGCATCACAATCTC+CGG - chr7_4:54263235-54263254 None:intergenic 45.0%
! AAGGAGTGTGCGTTTATCCT+TGG + chr7_4:54263273-54263292 Msa1163180:CDS 45.0%
!! ACACTGTGGCCATTGTTTTG+AGG + chr7_4:54263928-54263947 Msa1163180:intron 45.0%
CAACGACTCATTGTTGATGC+TGG + chr7_4:54264081-54264100 Msa1163180:CDS 45.0%
CAACTCTACGAGATAGGACA+AGG - chr7_4:54264109-54264128 None:intergenic 45.0%
!! GATGCTATGTTCAGGTTGGA+CGG + chr7_4:54264313-54264332 Msa1163180:intron 45.0%
!! CTTACCACGGTGGATTCTTT+TGG + chr7_4:54264469-54264488 Msa1163180:intron 45.0%
!!! GCCGCCTTTTTTTTGTAGGT+TGG + chr7_4:54264681-54264700 Msa1163180:intron 45.0%
CAGATTCACATTGCCCAAAG+AGG + chr7_4:54265124-54265143 Msa1163180:intron 45.0%
! TGTCAACTTTTGCACTTGGG+AGG + chr7_4:54265203-54265222 Msa1163180:CDS 45.0%
! AACTTTTGCACTTGGGAGGT+TGG + chr7_4:54265207-54265226 Msa1163180:CDS 45.0%
GCCTGCATGCAGATAAATAC+TGG - chr7_4:54265256-54265275 None:intergenic 45.0%
TAGGACTCACACAATCAAGC+TGG + chr7_4:54265323-54265342 Msa1163180:intron 45.0%
GCTGGTATTGCTTATAACGG+TGG + chr7_4:54265341-54265360 Msa1163180:CDS 45.0%
GTGTCAAGAAGATCAAGCAG+AGG - chr7_4:54265374-54265393 None:intergenic 45.0%
! AACGCAGCTTTTGCTCTCTA+TGG + chr7_4:54265416-54265435 Msa1163180:CDS 45.0%
! AGCTTTTGCTCTCTATGGTC+TGG + chr7_4:54265421-54265440 Msa1163180:CDS 45.0%
! CTATGGTCTGGCTGATAATG+AGG + chr7_4:54265433-54265452 Msa1163180:CDS 45.0%
TGCTGACCGAGTAAAGAACA+AGG - chr7_4:54265471-54265490 None:intergenic 45.0%
TACTCGGTCAGCATAGTATG+TGG + chr7_4:54265478-54265497 Msa1163180:intron 45.0%
GCGGTTATAATTAAGGCTGG+TGG + chr7_4:54265573-54265592 Msa1163180:CDS 45.0%
AGGTTGGAAGAGAAGATGCA+AGG + chr7_4:54265839-54265858 Msa1163180:CDS 45.0%
GGTTGGAAGAGAAGATGCAA+GGG + chr7_4:54265840-54265859 Msa1163180:CDS 45.0%
!!! ACTTTTTTTGTCCACCTCCC+TGG + chr7_4:54266101-54266120 Msa1163180:intron 45.0%
AAGCGTCACCTTTCTGCTTT+GGG - chr7_4:54266210-54266229 None:intergenic 45.0%
GCTTCACACAATGGCTATGA+AGG + chr7_4:54266237-54266256 Msa1163180:CDS 45.0%
AGGAGCAGGATCAACAATAG+AGG - chr7_4:54266272-54266291 None:intergenic 45.0%
! CAGTCTGTTCTCCCTTTTTC+AGG + chr7_4:54266674-54266693 Msa1163180:intron 45.0%
CAATGTTTGATGGGGGCTAT+CGG + chr7_4:54266753-54266772 Msa1163180:CDS 45.0%
AATGTTTGATGGGGGCTATC+GGG + chr7_4:54266754-54266773 Msa1163180:CDS 45.0%
TTAAGTGTAAGACCAGTGCC+AGG - chr7_4:54266831-54266850 None:intergenic 45.0%
ACTTAAAACGTTCCTGGCAC+CGG + chr7_4:54266845-54266864 Msa1163180:intron 45.0%
! TGTGATGGAAGTTCTGTGCT+TGG + chr7_4:54266940-54266959 Msa1163180:intron 45.0%
CTGTGCTTGGCGTCTTTAAT+AGG + chr7_4:54266953-54266972 Msa1163180:intron 45.0%
GGCGTCTTTAATAGGCTAAG+TGG + chr7_4:54266961-54266980 Msa1163180:intron 45.0%
AGCACGAGTTAGCCAAATGA+GGG - chr7_4:54267753-54267772 None:intergenic 45.0%
TAGCTTCTGTCCAATTGCAC+AGG + chr7_4:54267914-54267933 Msa1163180:three_prime_UTR 45.0%
!!! AGGCTTGAGAATGCTGGTTT+TGG + chr7_4:54268121-54268140 Msa1163180:three_prime_UTR 45.0%
TACATAACAAGCTGCTAGCC+TGG + chr7_4:54268244-54268263 Msa1163180:three_prime_UTR 45.0%
!! AATTATTATATAAACATTTA+GGG - chr7_4:54265298-54265317 None:intergenic 5.0%
!! AATTATTATATAAACATTTA+GGG - chr7_4:54265298-54265317 None:intergenic 5.0%
!! TATGGTGGTGGTGGTGATTG+TGG - chr7_4:54262820-54262839 None:intergenic 50.0%
GTGGGAAGATCTAAACGACG+AGG - chr7_4:54262948-54262967 None:intergenic 50.0%
CTCTCCGAATTCGCCAAAGA+CGG + chr7_4:54263056-54263075 Msa1163180:CDS 50.0%
GGTACCGTCTTTGGCGAATT+CGG - chr7_4:54263063-54263082 None:intergenic 50.0%
GACGAAAACGGTACCGTCTT+TGG - chr7_4:54263072-54263091 None:intergenic 50.0%
TCCTGTTCTGGTGGAGATTC+TGG + chr7_4:54263203-54263222 Msa1163180:CDS 50.0%
TCCAGAATCTCCACCAGAAC+AGG - chr7_4:54263207-54263226 None:intergenic 50.0%
! TCTGGTGGAGATTCTGGAGA+TGG + chr7_4:54263209-54263228 Msa1163180:CDS 50.0%
CTTTGACAGCAAGGAGACCA+AGG - chr7_4:54263293-54263312 None:intergenic 50.0%
! GGTATTTTCATGGGCAAGGC+TGG - chr7_4:54264208-54264227 None:intergenic 50.0%
CCTGACAAGGGTCTTGATGT+TGG - chr7_4:54264229-54264248 None:intergenic 50.0%
CCAACATCAAGACCCTTGTC+AGG + chr7_4:54264226-54264245 Msa1163180:CDS 50.0%
TTGAAATGCGAGAGTCCGCA+AGG - chr7_4:54264407-54264426 None:intergenic 50.0%
GGTTGGCGTGATTGGAAATC+TGG + chr7_4:54264698-54264717 Msa1163180:intron 50.0%
AAGAGAGAGGTTCTTCTGGC+TGG + chr7_4:54264741-54264760 Msa1163180:CDS 50.0%
! AGAGAGAGGTTCTTCTGGCT+GGG + chr7_4:54264742-54264761 Msa1163180:CDS 50.0%
GAATGATAGCTCCTGCTGTC+TGG + chr7_4:54264952-54264971 Msa1163180:intron 50.0%
GGGGTTTATAGCGCCTCTTT+GGG - chr7_4:54265140-54265159 None:intergenic 50.0%
AGGGGTTTATAGCGCCTCTT+TGG - chr7_4:54265141-54265160 None:intergenic 50.0%
TGGAAGAGAAGATGCAAGGG+CGG + chr7_4:54265843-54265862 Msa1163180:CDS 50.0%
TCTTATGCGCACTGGGGAAA+AGG + chr7_4:54265978-54265997 Msa1163180:CDS 50.0%
! CTTTCTAAGTACTGCCAGGG+AGG - chr7_4:54266118-54266137 None:intergenic 50.0%
! GAAGCGTCACCTTTCTGCTT+TGG - chr7_4:54266211-54266230 None:intergenic 50.0%
TTCAGCAGCGCTTCACACAA+TGG + chr7_4:54266228-54266247 Msa1163180:CDS 50.0%
ACGCAAAATACCTGGGGAGT+TGG - chr7_4:54266301-54266320 None:intergenic 50.0%
AAAATTTGGAAGCCGGTGCC+AGG - chr7_4:54266860-54266879 None:intergenic 50.0%
TTCTTGCCCCACATGCATTG+TGG + chr7_4:54266992-54267011 Msa1163180:intron 50.0%
!! TCTGCAGCTTTAAGGAGGTC+CGG - chr7_4:54267311-54267330 None:intergenic 50.0%
!! GCTATTTCTGAGGTAGGCCA+CGG + chr7_4:54267371-54267390 Msa1163180:intron 50.0%
AGCAACTGAAACTCAAGCCG+TGG - chr7_4:54267391-54267410 None:intergenic 50.0%
CAGCACGAGTTAGCCAAATG+AGG - chr7_4:54267754-54267773 None:intergenic 50.0%
!! TATGGTGGTGGTGGTGATTG+TGG - chr7_4:54262820-54262839 None:intergenic 50.0%
GTGGGAAGATCTAAACGACG+AGG - chr7_4:54262948-54262967 None:intergenic 50.0%
CTCTCCGAATTCGCCAAAGA+CGG + chr7_4:54263056-54263075 Msa1163180:CDS 50.0%
GGTACCGTCTTTGGCGAATT+CGG - chr7_4:54263063-54263082 None:intergenic 50.0%
GACGAAAACGGTACCGTCTT+TGG - chr7_4:54263072-54263091 None:intergenic 50.0%
TCCTGTTCTGGTGGAGATTC+TGG + chr7_4:54263203-54263222 Msa1163180:CDS 50.0%
TCCAGAATCTCCACCAGAAC+AGG - chr7_4:54263207-54263226 None:intergenic 50.0%
! TCTGGTGGAGATTCTGGAGA+TGG + chr7_4:54263209-54263228 Msa1163180:CDS 50.0%
CTTTGACAGCAAGGAGACCA+AGG - chr7_4:54263293-54263312 None:intergenic 50.0%
! GGTATTTTCATGGGCAAGGC+TGG - chr7_4:54264208-54264227 None:intergenic 50.0%
CCTGACAAGGGTCTTGATGT+TGG - chr7_4:54264229-54264248 None:intergenic 50.0%
CCAACATCAAGACCCTTGTC+AGG + chr7_4:54264226-54264245 Msa1163180:CDS 50.0%
TTGAAATGCGAGAGTCCGCA+AGG - chr7_4:54264407-54264426 None:intergenic 50.0%
GGTTGGCGTGATTGGAAATC+TGG + chr7_4:54264698-54264717 Msa1163180:intron 50.0%
AAGAGAGAGGTTCTTCTGGC+TGG + chr7_4:54264741-54264760 Msa1163180:CDS 50.0%
! AGAGAGAGGTTCTTCTGGCT+GGG + chr7_4:54264742-54264761 Msa1163180:CDS 50.0%
GAATGATAGCTCCTGCTGTC+TGG + chr7_4:54264952-54264971 Msa1163180:intron 50.0%
GGGGTTTATAGCGCCTCTTT+GGG - chr7_4:54265140-54265159 None:intergenic 50.0%
AGGGGTTTATAGCGCCTCTT+TGG - chr7_4:54265141-54265160 None:intergenic 50.0%
TGGAAGAGAAGATGCAAGGG+CGG + chr7_4:54265843-54265862 Msa1163180:CDS 50.0%
TCTTATGCGCACTGGGGAAA+AGG + chr7_4:54265978-54265997 Msa1163180:CDS 50.0%
! CTTTCTAAGTACTGCCAGGG+AGG - chr7_4:54266118-54266137 None:intergenic 50.0%
! GAAGCGTCACCTTTCTGCTT+TGG - chr7_4:54266211-54266230 None:intergenic 50.0%
TTCAGCAGCGCTTCACACAA+TGG + chr7_4:54266228-54266247 Msa1163180:CDS 50.0%
ACGCAAAATACCTGGGGAGT+TGG - chr7_4:54266301-54266320 None:intergenic 50.0%
AAAATTTGGAAGCCGGTGCC+AGG - chr7_4:54266860-54266879 None:intergenic 50.0%
TTCTTGCCCCACATGCATTG+TGG + chr7_4:54266992-54267011 Msa1163180:intron 50.0%
!! TCTGCAGCTTTAAGGAGGTC+CGG - chr7_4:54267311-54267330 None:intergenic 50.0%
!! GCTATTTCTGAGGTAGGCCA+CGG + chr7_4:54267371-54267390 Msa1163180:intron 50.0%
AGCAACTGAAACTCAAGCCG+TGG - chr7_4:54267391-54267410 None:intergenic 50.0%
CAGCACGAGTTAGCCAAATG+AGG - chr7_4:54267754-54267773 None:intergenic 50.0%
!! GAGTGTGGTTATGGTGGTGG+TGG - chr7_4:54262829-54262848 None:intergenic 55.0%
CGTCTTTGGCGAATTCGGAG+AGG - chr7_4:54263058-54263077 None:intergenic 55.0%
!! TTGCGGTGCTGTTCCTGTTC+TGG + chr7_4:54263191-54263210 Msa1163180:CDS 55.0%
! GTGGAGATTCTGGAGATGGC+CGG + chr7_4:54263213-54263232 Msa1163180:CDS 55.0%
!! GCTATGTTCAGGTTGGACGG+TGG + chr7_4:54264316-54264335 Msa1163180:intron 55.0%
AAGGTACAGAGAGCAGCTGC+AGG + chr7_4:54264379-54264398 Msa1163180:CDS 55.0%
TTCGCAGGAACTTACCACGG+TGG + chr7_4:54264459-54264478 Msa1163180:intron 55.0%
! GAGAGAGGTTCTTCTGGCTG+GGG + chr7_4:54264743-54264762 Msa1163180:CDS 55.0%
GTCAGAGGCAGCATATCACC+AGG - chr7_4:54265524-54265543 None:intergenic 55.0%
GGAAGAGAAGATGCAAGGGC+GGG + chr7_4:54265844-54265863 Msa1163180:CDS 55.0%
! TCTAAGTACTGCCAGGGAGG+TGG - chr7_4:54266115-54266134 None:intergenic 55.0%
!! GGAGTTGGTGATGTAGGAGC+AGG - chr7_4:54266286-54266305 None:intergenic 55.0%
TCCTACATCACCAACTCCCC+AGG + chr7_4:54266288-54266307 Msa1163180:CDS 55.0%
!! ACCTGGGGAGTTGGTGATGT+AGG - chr7_4:54266292-54266311 None:intergenic 55.0%
GGCTAACTCGTGCTGTCTTG+CGG + chr7_4:54267759-54267778 Msa1163180:CDS 55.0%
TCACGGTGCTCCTGTGCAAT+TGG - chr7_4:54267927-54267946 None:intergenic 55.0%
!! GAGTGTGGTTATGGTGGTGG+TGG - chr7_4:54262829-54262848 None:intergenic 55.0%
CGTCTTTGGCGAATTCGGAG+AGG - chr7_4:54263058-54263077 None:intergenic 55.0%
!! TTGCGGTGCTGTTCCTGTTC+TGG + chr7_4:54263191-54263210 Msa1163180:CDS 55.0%
! GTGGAGATTCTGGAGATGGC+CGG + chr7_4:54263213-54263232 Msa1163180:CDS 55.0%
!! GCTATGTTCAGGTTGGACGG+TGG + chr7_4:54264316-54264335 Msa1163180:intron 55.0%
AAGGTACAGAGAGCAGCTGC+AGG + chr7_4:54264379-54264398 Msa1163180:CDS 55.0%
TTCGCAGGAACTTACCACGG+TGG + chr7_4:54264459-54264478 Msa1163180:intron 55.0%
! GAGAGAGGTTCTTCTGGCTG+GGG + chr7_4:54264743-54264762 Msa1163180:CDS 55.0%
GTCAGAGGCAGCATATCACC+AGG - chr7_4:54265524-54265543 None:intergenic 55.0%
GGAAGAGAAGATGCAAGGGC+GGG + chr7_4:54265844-54265863 Msa1163180:CDS 55.0%
! TCTAAGTACTGCCAGGGAGG+TGG - chr7_4:54266115-54266134 None:intergenic 55.0%
!! GGAGTTGGTGATGTAGGAGC+AGG - chr7_4:54266286-54266305 None:intergenic 55.0%
TCCTACATCACCAACTCCCC+AGG + chr7_4:54266288-54266307 Msa1163180:CDS 55.0%
!! ACCTGGGGAGTTGGTGATGT+AGG - chr7_4:54266292-54266311 None:intergenic 55.0%
GGCTAACTCGTGCTGTCTTG+CGG + chr7_4:54267759-54267778 Msa1163180:CDS 55.0%
TCACGGTGCTCCTGTGCAAT+TGG - chr7_4:54267927-54267946 None:intergenic 55.0%
!! CGGTGCTGTTCCTGTTCTGG+TGG + chr7_4:54263194-54263213 Msa1163180:CDS 60.0%
TCTTCGGCTCTCCAGACAGC+AGG - chr7_4:54264966-54264985 None:intergenic 60.0%
TGCACTTGGGAGGTTGGCAC+AGG + chr7_4:54265213-54265232 Msa1163180:CDS 60.0%
!! CGGTGCTGTTCCTGTTCTGG+TGG + chr7_4:54263194-54263213 Msa1163180:CDS 60.0%
TCTTCGGCTCTCCAGACAGC+AGG - chr7_4:54264966-54264985 None:intergenic 60.0%
TGCACTTGGGAGGTTGGCAC+AGG + chr7_4:54265213-54265232 Msa1163180:CDS 60.0%
GAGCAGCTGCAGGTGCCTTG+CGG + chr7_4:54264389-54264408 Msa1163180:CDS 65.0%
GAGCAGCTGCAGGTGCCTTG+CGG + chr7_4:54264389-54264408 Msa1163180:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 54262813 54268336 54262813 ID=Msa1163180;Name=Msa1163180
chr7_4 mRNA 54262813 54268336 54262813 ID=Msa1163180-mRNA-1;Parent=Msa1163180;Name=Msa1163180-mRNA-1;_AED=0.27;_eAED=0.27;_QI=48|1|1|1|1|1|19|547|697
chr7_4 exon 54262813 54263077 54262813 ID=Msa1163180-mRNA-1:exon:15744;Parent=Msa1163180-mRNA-1
chr7_4 exon 54263166 54263311 54263166 ID=Msa1163180-mRNA-1:exon:15745;Parent=Msa1163180-mRNA-1
chr7_4 exon 54264072 54264247 54264072 ID=Msa1163180-mRNA-1:exon:15746;Parent=Msa1163180-mRNA-1
chr7_4 exon 54264327 54264447 54264327 ID=Msa1163180-mRNA-1:exon:15747;Parent=Msa1163180-mRNA-1
chr7_4 exon 54264522 54264596 54264522 ID=Msa1163180-mRNA-1:exon:15748;Parent=Msa1163180-mRNA-1
chr7_4 exon 54264699 54264793 54264699 ID=Msa1163180-mRNA-1:exon:15749;Parent=Msa1163180-mRNA-1
chr7_4 exon 54264961 54265036 54264961 ID=Msa1163180-mRNA-1:exon:15750;Parent=Msa1163180-mRNA-1
chr7_4 exon 54265127 54265234 54265127 ID=Msa1163180-mRNA-1:exon:15751;Parent=Msa1163180-mRNA-1
chr7_4 exon 54265326 54265454 54265326 ID=Msa1163180-mRNA-1:exon:15752;Parent=Msa1163180-mRNA-1
chr7_4 exon 54265564 54265632 54265564 ID=Msa1163180-mRNA-1:exon:15753;Parent=Msa1163180-mRNA-1
chr7_4 exon 54265806 54265865 54265806 ID=Msa1163180-mRNA-1:exon:15754;Parent=Msa1163180-mRNA-1
chr7_4 exon 54265958 54266081 54265958 ID=Msa1163180-mRNA-1:exon:15755;Parent=Msa1163180-mRNA-1
chr7_4 exon 54266170 54266309 54266170 ID=Msa1163180-mRNA-1:exon:15756;Parent=Msa1163180-mRNA-1
chr7_4 exon 54266524 54266587 54266524 ID=Msa1163180-mRNA-1:exon:15757;Parent=Msa1163180-mRNA-1
chr7_4 exon 54266696 54266775 54266696 ID=Msa1163180-mRNA-1:exon:15758;Parent=Msa1163180-mRNA-1
chr7_4 exon 54267112 54267176 54267112 ID=Msa1163180-mRNA-1:exon:15759;Parent=Msa1163180-mRNA-1
chr7_4 exon 54267265 54267382 54267265 ID=Msa1163180-mRNA-1:exon:15760;Parent=Msa1163180-mRNA-1
chr7_4 exon 54267468 54267592 54267468 ID=Msa1163180-mRNA-1:exon:15761;Parent=Msa1163180-mRNA-1
chr7_4 exon 54267684 54268336 54267684 ID=Msa1163180-mRNA-1:exon:15762;Parent=Msa1163180-mRNA-1
chr7_4 five_prime_UTR 54262813 54262860 54262813 ID=Msa1163180-mRNA-1:five_prime_utr;Parent=Msa1163180-mRNA-1
chr7_4 CDS 54262861 54263077 54262861 ID=Msa1163180-mRNA-1:cds;Parent=Msa1163180-mRNA-1
chr7_4 CDS 54263166 54263311 54263166 ID=Msa1163180-mRNA-1:cds;Parent=Msa1163180-mRNA-1
chr7_4 CDS 54264072 54264247 54264072 ID=Msa1163180-mRNA-1:cds;Parent=Msa1163180-mRNA-1
chr7_4 CDS 54264327 54264447 54264327 ID=Msa1163180-mRNA-1:cds;Parent=Msa1163180-mRNA-1
chr7_4 CDS 54264522 54264596 54264522 ID=Msa1163180-mRNA-1:cds;Parent=Msa1163180-mRNA-1
chr7_4 CDS 54264699 54264793 54264699 ID=Msa1163180-mRNA-1:cds;Parent=Msa1163180-mRNA-1
chr7_4 CDS 54264961 54265036 54264961 ID=Msa1163180-mRNA-1:cds;Parent=Msa1163180-mRNA-1
chr7_4 CDS 54265127 54265234 54265127 ID=Msa1163180-mRNA-1:cds;Parent=Msa1163180-mRNA-1
chr7_4 CDS 54265326 54265454 54265326 ID=Msa1163180-mRNA-1:cds;Parent=Msa1163180-mRNA-1
chr7_4 CDS 54265564 54265632 54265564 ID=Msa1163180-mRNA-1:cds;Parent=Msa1163180-mRNA-1
chr7_4 CDS 54265806 54265865 54265806 ID=Msa1163180-mRNA-1:cds;Parent=Msa1163180-mRNA-1
chr7_4 CDS 54265958 54266081 54265958 ID=Msa1163180-mRNA-1:cds;Parent=Msa1163180-mRNA-1
chr7_4 CDS 54266170 54266309 54266170 ID=Msa1163180-mRNA-1:cds;Parent=Msa1163180-mRNA-1
chr7_4 CDS 54266524 54266587 54266524 ID=Msa1163180-mRNA-1:cds;Parent=Msa1163180-mRNA-1
chr7_4 CDS 54266696 54266775 54266696 ID=Msa1163180-mRNA-1:cds;Parent=Msa1163180-mRNA-1
chr7_4 CDS 54267112 54267176 54267112 ID=Msa1163180-mRNA-1:cds;Parent=Msa1163180-mRNA-1
chr7_4 CDS 54267265 54267382 54267265 ID=Msa1163180-mRNA-1:cds;Parent=Msa1163180-mRNA-1
chr7_4 CDS 54267468 54267592 54267468 ID=Msa1163180-mRNA-1:cds;Parent=Msa1163180-mRNA-1
chr7_4 CDS 54267684 54267789 54267684 ID=Msa1163180-mRNA-1:cds;Parent=Msa1163180-mRNA-1
chr7_4 three_prime_UTR 54267790 54268336 54267790 ID=Msa1163180-mRNA-1:three_prime_utr;Parent=Msa1163180-mRNA-1
Gene Sequence

>Msa1163180

ATGGATCTTCGTAACAACACTCAAAGTTTGAAGAGAAAACTCGATTGGACTGAAGAAGATGAAATGGAAGAAGTAACAACCAAACCTCGTCGTTTAGATCTTCCCACTGATATTTCCAATCGGATTCATCTTCTCAAATCCGCTTTTTCATCTTCTCGTTCAGATCGTTCATCTGCTAACTGCGCTCTCTTCGTCCTCTCCGAATTCGCCAAAGACGAGGATATTGTTGATGTTATAGTCAATTGCGGTGCTGTTCCTGTTCTGGTGGAGATTCTGGAGATGGCCGGAGATTGTGATGCCGATTCTTATAAGTATGATATGGAGAAGGAGTGTGCGTTTATCCTTGGTCTCCTTGCTGTCAAACCAGAGTATCAACGACTCATTGTTGATGCTGGAGCCTTGTCCTATCTCGTAGAGTTGTTAAAGAGACCCAAAAGCCCTGTAATTTCTCAAGCACTGTTTTCTGGTCTTCTTAGGAGAGCAGCTGACGCAATAACCAGCCTTGCCCATGAAAATACCAACATCAAGACCCTTGTCAGGTTGGACGGTGGTATCCCTCCTCTTGTTGAATTGCTTGAATTCAATGATACAAAGGTACAGAGAGCAGCTGCAGGTGCCTTGCGGACTCTCGCATTTCAAAACGCTGAGAACAAAAATCAGATTATTGAATGCAATGCGTTGCCAACTCTTGTACTAATGCTTGGATCAGAAGATTCCTCAATACATTATGAAGCGGTTGGCGTGATTGGAAATCTGGTCCACTCTTCGCCAGAAATTAAGAGAGAGGTTCTTCTGGCTGGGGCTTTACAGCCTGTTATTTGCTTACTGAGCTCCTGCTGTCTGGAGAGCCGAAGAGAAGCAGCTCTTTTAATTGGTCAATTTGCTACAACGGATTCAGATTGCAAGATTCACATTGCCCAAAGAGGCGCTATAAACCCCTTAATTGAGATGCTTAAGTCTTCTGATTTACAGCTTAGGGAAATGTCAACTTTTGCACTTGGGAGGTTGGCACAGGACTCACACAATCAAGCTGGTATTGCTTATAACGGTGGTATAGAGCCTCTGCTTGATCTTCTTGACACAAAGAATGGTTCCGTTCAACACAACGCAGCTTTTGCTCTCTATGGTCTGGCTGATAATGAGGACAATGTTGCGGTTATAATTAAGGCTGGTGGTTTTCAAAAACTGCATGATGGACATTTCAATGCTCAACCTACTCAAGAGTGTGTAACAAAGACGTTAAAAAGGTTGGAAGAGAAGATGCAAGGGCGGGTACTGAAACACATGTTATATCTTATGCGCACTGGGGAAAAGGATCTTCAAATACGTGTAGCTCTTGCTCTTGCACATTTATGTTCCCCTGATGATCGTAAAACTATATTTATTGACAATAATGGATTAGAACTGCTGTTGAATCTTCTCCAATCTACAAACCCAAAGCAGAAAGGTGACGCTTCAGCAGCGCTTCACACAATGGCTATGAAGGACATGTGTTCCTCTATTGTTGATCCTGCTCCTACATCACCAACTCCCCAGGTTTACTTGGGTGAGCAATATGTAAACAATCCTAAACTTTCTGATGTCACATTCATAGTTGAAGGCAAAAGCTTCTATGCTCATAGAGTTTGTTTACTTTCTTCTTCTGATACATTTCGTGCAATGTTTGATGGGGGCTATCGGGAAAAGGAAGCCAAAAATATAGAGATTCCAAATATTAAATGGGATGTCTTTGAGTTGATGATGAGGTATATATACACTGGAGCAGTAGATATTGATTTGGATCTTGCTCCGGACCTCCTTAAAGCTGCAGATCAATATCTTCTTGATGGTCTTAAGAGTCTTTGCGAATATGCTATTTCTGAGGATATTTCTGTGGAAAATGTTTCACAGATGTATGTGATGTCAGACACTTTTAATGCTACATCCTTAAGATATGCGTGCATACTCTTTGTCCTGAAGCAATTTGATAATCTGAGTACCAAACCATGGTATCGTCGCTTTCTTCATTGCATTGTACCAGACATTCACAAATTCTTCTCAACTCTTCTTACTCACCCTCATTTGGCTAACTCGTGCTGTCTTGCGGATCCTTAG

Protein sequence

>Msa1163180

MDLRNNTQSLKRKLDWTEEDEMEEVTTKPRRLDLPTDISNRIHLLKSAFSSSRSDRSSANCALFVLSEFAKDEDIVDVIVNCGAVPVLVEILEMAGDCDADSYKYDMEKECAFILGLLAVKPEYQRLIVDAGALSYLVELLKRPKSPVISQALFSGLLRRAADAITSLAHENTNIKTLVRLDGGIPPLVELLEFNDTKVQRAAAGALRTLAFQNAENKNQIIECNALPTLVLMLGSEDSSIHYEAVGVIGNLVHSSPEIKREVLLAGALQPVICLLSSCCLESRREAALLIGQFATTDSDCKIHIAQRGAINPLIEMLKSSDLQLREMSTFALGRLAQDSHNQAGIAYNGGIEPLLDLLDTKNGSVQHNAAFALYGLADNEDNVAVIIKAGGFQKLHDGHFNAQPTQECVTKTLKRLEEKMQGRVLKHMLYLMRTGEKDLQIRVALALAHLCSPDDRKTIFIDNNGLELLLNLLQSTNPKQKGDASAALHTMAMKDMCSSIVDPAPTSPTPQVYLGEQYVNNPKLSDVTFIVEGKSFYAHRVCLLSSSDTFRAMFDGGYREKEAKNIEIPNIKWDVFELMMRYIYTGAVDIDLDLAPDLLKAADQYLLDGLKSLCEYAISEDISVENVSQMYVMSDTFNATSLRYACILFVLKQFDNLSTKPWYRRFLHCIVPDIHKFFSTLLTHPHLANSCCLADP*