Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1137730 | XP_003621585.1 | 99.087 | 438 | 4 | 0 | 1 | 438 | 1 | 438 | 0.0 | 900 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1137730 | sp|Q9LFV5|FK111_ARATH | 77.324 | 441 | 92 | 3 | 1 | 437 | 11 | 447 | 0.0 | 699 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1137730 | A2Q633 | 99.087 | 438 | 4 | 0 | 1 | 438 | 1 | 438 | 0.0 | 900 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0056450 | Msa1137730 | 0.803409 | 3.534989e-49 | -8.615850e-47 |
| Msa0661320 | Msa1137730 | 0.808845 | 2.535561e-50 | -8.615850e-47 |
| Msa0817460 | Msa1137730 | 0.809934 | 1.480322e-50 | -8.615850e-47 |
| Msa1034500 | Msa1137730 | 0.800048 | 1.730445e-48 | -8.615850e-47 |
| Msa1036610 | Msa1137730 | 0.823319 | 1.477035e-53 | -8.615850e-47 |
| Msa0267370 | Msa1137730 | 0.806464 | 8.123776e-50 | -8.615850e-47 |
| Msa0317970 | Msa1137730 | 0.801513 | 8.691825e-49 | -8.615850e-47 |
| Msa0330340 | Msa1137730 | 0.801585 | 8.402142e-49 | -8.615850e-47 |
| Msa0342010 | Msa1137730 | 0.801125 | 1.043642e-48 | -8.615850e-47 |
| Msa1137730 | Msa1162780 | 0.810960 | 8.888990e-51 | -8.615850e-47 |
| Msa1137730 | Msa1246360 | 0.829291 | 5.588750e-55 | -8.615850e-47 |
| Msa1137730 | Msa1284900 | 0.811394 | 7.156698e-51 | -8.615850e-47 |
| Msa1137730 | Msa1463900 | 0.801683 | 8.021134e-49 | -8.615850e-47 |
| Msa0545850 | Msa1137730 | 0.807624 | 4.615077e-50 | -8.615850e-47 |
| Msa0572840 | Msa1137730 | 0.800104 | 1.685328e-48 | -8.615850e-47 |
| Msa0573180 | Msa1137730 | 0.804948 | 1.690382e-49 | -8.615850e-47 |
| Msa0868160 | Msa1137730 | 0.807640 | 4.578696e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1137730 | MtrunA17_Chr7g0220421 | 99.087 | 438 | 4 | 0 | 1 | 438 | 1 | 438 | 0.0 | 900 |
| Msa1137730 | MtrunA17_Chr3g0122401 | 31.471 | 340 | 209 | 13 | 90 | 416 | 111 | 439 | 4.50e-35 | 135 |
| Msa1137730 | MtrunA17_Chr8g0347881 | 31.014 | 345 | 199 | 14 | 97 | 413 | 43 | 376 | 5.29e-28 | 114 |
| Msa1137730 | MtrunA17_Chr4g0052791 | 27.778 | 378 | 241 | 10 | 90 | 437 | 55 | 430 | 5.41e-26 | 109 |
| Msa1137730 | MtrunA17_Chr8g0347851 | 27.811 | 338 | 214 | 13 | 97 | 413 | 43 | 371 | 9.17e-23 | 99.8 |
| Msa1137730 | MtrunA17_Chr1g0161871 | 30.169 | 295 | 174 | 11 | 90 | 366 | 24 | 304 | 6.52e-20 | 90.9 |
| Msa1137730 | MtrunA17_Chr1g0161891 | 26.176 | 340 | 215 | 14 | 83 | 411 | 6 | 320 | 4.42e-18 | 85.1 |
| Msa1137730 | MtrunA17_Chr1g0152611 | 24.932 | 369 | 247 | 9 | 70 | 414 | 5 | 367 | 3.33e-17 | 83.2 |
| Msa1137730 | MtrunA17_Chr4g0003651 | 20.833 | 360 | 239 | 14 | 94 | 419 | 1 | 348 | 1.52e-11 | 65.9 |
| Msa1137730 | MtrunA17_Chr1g0150561 | 22.762 | 391 | 242 | 13 | 98 | 437 | 22 | 403 | 2.17e-11 | 65.5 |
| Msa1137730 | MtrunA17_Chr2g0293971 | 21.711 | 304 | 205 | 8 | 96 | 375 | 7 | 301 | 2.19e-11 | 65.1 |
| Msa1137730 | MtrunA17_Chr3g0078421 | 27.219 | 169 | 112 | 6 | 70 | 231 | 6 | 170 | 4.66e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1137730 | AT5G15710.1 | 77.324 | 441 | 92 | 3 | 1 | 437 | 11 | 447 | 0.0 | 699 |
| Msa1137730 | AT5G15710.2 | 77.324 | 441 | 92 | 3 | 1 | 437 | 11 | 447 | 0.0 | 699 |
| Msa1137730 | AT1G30950.1 | 28.612 | 353 | 222 | 9 | 90 | 414 | 42 | 392 | 2.17e-31 | 125 |
| Msa1137730 | AT1G27340.1 | 29.210 | 291 | 183 | 10 | 89 | 367 | 111 | 390 | 1.03e-29 | 120 |
| Msa1137730 | AT3G61590.1 | 28.099 | 363 | 196 | 19 | 96 | 413 | 41 | 383 | 5.05e-22 | 98.2 |
| Msa1137730 | AT3G61590.2 | 28.099 | 363 | 196 | 19 | 96 | 413 | 49 | 391 | 5.32e-22 | 98.2 |
| Msa1137730 | AT3G61590.3 | 28.099 | 363 | 196 | 19 | 96 | 413 | 49 | 391 | 5.32e-22 | 98.2 |
| Msa1137730 | AT3G61590.4 | 28.099 | 363 | 196 | 19 | 96 | 413 | 77 | 419 | 1.11e-21 | 97.4 |
| Msa1137730 | AT5G43190.1 | 27.401 | 354 | 222 | 13 | 83 | 414 | 36 | 376 | 2.29e-14 | 75.1 |
| Msa1137730 | AT5G49610.1 | 22.654 | 309 | 206 | 10 | 90 | 375 | 1 | 299 | 8.90e-11 | 63.5 |
Find 96 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGGTTGGTTGGGTCTTC+TGG | 0.181459 | 7_4:+6680363 | Msa1137730:CDS |
| GTAGGGAAATCTTCTGAATT+AGG | 0.182373 | 7_4:+6679826 | Msa1137730:CDS |
| CTCTGCAGAGTATAAGAATT+TGG | 0.204348 | 7_4:+6680847 | Msa1137730:CDS |
| TTCAAATGGAGGATAATATA+TGG | 0.277100 | 7_4:+6680079 | Msa1137730:CDS |
| CTTGATGGTTACTTGGTTGC+CGG | 0.321807 | 7_4:+6680777 | Msa1137730:CDS |
| AGATGGCGTATTGTGATTCT+AGG | 0.329166 | 7_4:+6680658 | Msa1137730:CDS |
| CAATCTTTGTTCTTCAAAGA+TGG | 0.350971 | 7_4:+6680641 | Msa1137730:CDS |
| TCAACAAAGGCAACTGATAA+TGG | 0.351016 | 7_4:+6680488 | Msa1137730:CDS |
| GCTGAGAGATTTGAATGCTT+TGG | 0.354339 | 7_4:+6680951 | Msa1137730:CDS |
| TACTCTGCAGAGTGCTATAA+AGG | 0.356458 | 7_4:-6680836 | None:intergenic |
| GCTTCTCCTCCAAGGGGAAA+TGG | 0.361590 | 7_4:+6679919 | Msa1137730:CDS |
| AAATCGTTGGGAACATATTC+CGG | 0.373595 | 7_4:+6680734 | Msa1137730:CDS |
| ATGACTCAAAGGAAGATAAA+TGG | 0.392122 | 7_4:+6680592 | Msa1137730:CDS |
| CTTGATCCATTTCCCCTTGG+AGG | 0.397956 | 7_4:-6679925 | None:intergenic |
| GTCGTTACTTGATGGTTACT+TGG | 0.399584 | 7_4:+6680770 | Msa1137730:CDS |
| CATTGGGCGATCTGGTTGGT+TGG | 0.400587 | 7_4:+6680354 | Msa1137730:CDS |
| TCGTTCATTATTGAGATTGT+CGG | 0.402589 | 7_4:+6680929 | Msa1137730:CDS |
| CATCTTTGAAGAACAAAGAT+TGG | 0.407762 | 7_4:-6680640 | None:intergenic |
| TTGGAAACCCTTTCGCCGCT+TGG | 0.408910 | 7_4:+6680687 | Msa1137730:CDS |
| TGTTGATTAAAATGCATACT+TGG | 0.412063 | 7_4:-6680471 | None:intergenic |
| TCTGCAGAGTATAAGAATTT+GGG | 0.413504 | 7_4:+6680848 | Msa1137730:CDS |
| ATTGGGCGATCTGGTTGGTT+GGG | 0.418100 | 7_4:+6680355 | Msa1137730:CDS |
| TAGGGAAATCTTCTGAATTA+GGG | 0.430205 | 7_4:+6679827 | Msa1137730:CDS |
| GAGTATAAGAATTTGGGAAT+TGG | 0.434419 | 7_4:+6680854 | Msa1137730:CDS |
| GAAGAAACACATGCTACATT+TGG | 0.435966 | 7_4:+6680036 | Msa1137730:CDS |
| TTGTGATTCTAGGTTGTACT+TGG | 0.439967 | 7_4:+6680668 | Msa1137730:CDS |
| TTCCCGCGGTCGTTACTTGA+TGG | 0.443885 | 7_4:+6680762 | Msa1137730:CDS |
| GTCACTACATATATCATTAG+TGG | 0.448781 | 7_4:-6680547 | None:intergenic |
| TCTTACAAACCGAGCGAAGC+CGG | 0.449642 | 7_4:-6680164 | None:intergenic |
| AACTGATAATGGTTGTTGAT+AGG | 0.449854 | 7_4:+6680499 | Msa1137730:CDS |
| TTCCTTGATCCATTTCCCCT+TGG | 0.464201 | 7_4:-6679928 | None:intergenic |
| CTAGTCCAATGGGTCGAGTC+GGG | 0.468487 | 7_4:+6679953 | Msa1137730:CDS |
| CACGAGTCCTTCAAGGCAAA+AGG | 0.475886 | 7_4:+6679984 | Msa1137730:CDS |
| GTTTCTTCATCTAAACCCCT+TGG | 0.480699 | 7_4:-6680021 | None:intergenic |
| AGTTCATGCTGATGTTCAAA+TGG | 0.486260 | 7_4:+6680065 | Msa1137730:CDS |
| ATCTCATGTAACAAATCCTC+AGG | 0.495334 | 7_4:-6680111 | None:intergenic |
| AAATCTTCTGAATTAGGGTC+TGG | 0.498237 | 7_4:+6679832 | Msa1137730:CDS |
| TTTCTCCAGGTTTGAGTGAG+GGG | 0.501298 | 7_4:-6680444 | None:intergenic |
| CAAATAGAAGGCCCTTCCCT+TGG | 0.501474 | 7_4:-6681007 | None:intergenic |
| CGAGGAACACGAGTCCTTCA+AGG | 0.503415 | 7_4:+6679977 | Msa1137730:CDS |
| AACTGTAAACAGAACATTGT+GGG | 0.505669 | 7_4:-6680287 | None:intergenic |
| CATTCGAGTGTGCCATCACA+TGG | 0.505681 | 7_4:+6680228 | Msa1137730:CDS |
| CATCAAACCAAGCGGCGAAA+GGG | 0.512136 | 7_4:-6680694 | None:intergenic |
| CAATGGGTCGAGTCGGGTCG+AGG | 0.512891 | 7_4:+6679959 | Msa1137730:CDS |
| CAGACTAGATATAAATCGTT+GGG | 0.512905 | 7_4:+6680722 | Msa1137730:CDS |
| AAGATCTGGTCTTGGATTGG+TGG | 0.513036 | 7_4:+6681041 | Msa1137730:CDS |
| TCAAATGGAGGATAATATAT+GGG | 0.515850 | 7_4:+6680080 | Msa1137730:CDS |
| ACAGTTTACCTCTTAAAACT+TGG | 0.516909 | 7_4:+6680304 | Msa1137730:CDS |
| TCAAGGAATACTAGTCCAAT+GGG | 0.522157 | 7_4:+6679943 | Msa1137730:CDS |
| TCATCAAACCAAGCGGCGAA+AGG | 0.525618 | 7_4:-6680695 | None:intergenic |
| CTCGACCCGACTCGACCCAT+TGG | 0.526757 | 7_4:-6679958 | None:intergenic |
| TGGTTGGTTGGGTCTTCTGG+TGG | 0.528791 | 7_4:+6680366 | Msa1137730:CDS |
| CTCCAAGGGGAAATGGATCA+AGG | 0.529388 | 7_4:+6679926 | Msa1137730:CDS |
| TTCGCTCGGTTTGTAAGAGA+TGG | 0.531171 | 7_4:+6680169 | Msa1137730:CDS |
| TTAGAGAAAATGGATTGTGT+AGG | 0.532480 | 7_4:+6679808 | None:intergenic |
| TTAGGGTCTGGTGTTAGTAT+TGG | 0.537645 | 7_4:+6679844 | Msa1137730:CDS |
| AACGACCGCGGGAACTTAGC+CGG | 0.537699 | 7_4:-6680753 | None:intergenic |
| GTAATCCCCTCACTCAAACC+TGG | 0.544609 | 7_4:+6680439 | Msa1137730:CDS |
| GTATACAAGCTTCTCCTCCA+AGG | 0.552869 | 7_4:+6679911 | Msa1137730:CDS |
| AGATCTGGTCTTGGATTGGT+GGG | 0.553005 | 7_4:+6681042 | Msa1137730:CDS |
| GAAGAACAAAGATTGGAAGC+TGG | 0.555792 | 7_4:-6680633 | None:intergenic |
| ACAGACTAGATATAAATCGT+TGG | 0.556572 | 7_4:+6680721 | Msa1137730:CDS |
| TAGAGAAAATGGATTGTGTA+GGG | 0.557819 | 7_4:+6679809 | None:intergenic |
| TGGAAGCTGGCATAGTCTGA+TGG | 0.559469 | 7_4:-6680620 | None:intergenic |
| ATCAAGGAATACTAGTCCAA+TGG | 0.562043 | 7_4:+6679942 | Msa1137730:CDS |
| ACTAGTCCAATGGGTCGAGT+CGG | 0.562994 | 7_4:+6679952 | Msa1137730:CDS |
| TTTGAGTCATAAATTTCAGT+CGG | 0.563889 | 7_4:-6680579 | None:intergenic |
| TGCTTCACATCTTATAACCA+AGG | 0.565654 | 7_4:+6680990 | Msa1137730:CDS |
| TATACAAGCTTCTCCTCCAA+GGG | 0.568208 | 7_4:+6679912 | Msa1137730:CDS |
| AATAATGAACGAAAATACCT+TGG | 0.570508 | 7_4:-6680918 | None:intergenic |
| CGAAGCCGGAAAATCAGAAA+CGG | 0.572936 | 7_4:-6680150 | None:intergenic |
| GACTGAAATTTATGACTCAA+AGG | 0.574397 | 7_4:+6680581 | Msa1137730:CDS |
| AATGAACGAAAATACCTTGG+CGG | 0.574866 | 7_4:-6680915 | None:intergenic |
| GCCGCATTGGGCGATCTGGT+TGG | 0.576513 | 7_4:+6680350 | Msa1137730:CDS |
| GGTTGTTAAGACTAAACCAA+GGG | 0.578010 | 7_4:+6680005 | Msa1137730:CDS |
| CACATCTTATAACCAAGGGA+AGG | 0.586750 | 7_4:+6680995 | Msa1137730:CDS |
| TAGATAGAAGCATCAAACCT+TGG | 0.596404 | 7_4:-6681107 | None:intergenic |
| AACCATCAAGTAACGACCGC+GGG | 0.601882 | 7_4:-6680764 | None:intergenic |
| GCTTCACATCTTATAACCAA+GGG | 0.605187 | 7_4:+6680991 | Msa1137730:CDS |
| AGAACACAAGGTCCATGTGA+TGG | 0.635856 | 7_4:-6680240 | None:intergenic |
| ACATCTTATAACCAAGGGAA+GGG | 0.641003 | 7_4:+6680996 | Msa1137730:CDS |
| TCATGCTGATGTTCAAATGG+AGG | 0.641632 | 7_4:+6680068 | Msa1137730:CDS |
| CTCAAAGGAAGATAAATGGT+CGG | 0.644756 | 7_4:+6680596 | Msa1137730:CDS |
| TGGTTGCCGGTACTCAGAAG+CGG | 0.650052 | 7_4:+6680790 | Msa1137730:CDS |
| AGATCAGTAGGATGCCGCCA+AGG | 0.663629 | 7_4:+6680901 | Msa1137730:CDS |
| TTACAGAAACTAAGAACACA+AGG | 0.666240 | 7_4:-6680252 | None:intergenic |
| AGCCGGAAAATCAGAAACGG+CGG | 0.667705 | 7_4:-6680147 | None:intergenic |
| AAACTGTAAACAGAACATTG+TGG | 0.671228 | 7_4:-6680288 | None:intergenic |
| TATATGGGCTATGTTGCCTG+AGG | 0.680020 | 7_4:+6680095 | Msa1137730:CDS |
| AGGTTGTTAAGACTAAACCA+AGG | 0.680360 | 7_4:+6680004 | Msa1137730:CDS |
| ACCAACCAGATCGCCCAATG+CGG | 0.690988 | 7_4:-6680351 | None:intergenic |
| CTGTACATCATCAAACCAAG+CGG | 0.696757 | 7_4:-6680702 | None:intergenic |
| ATATTCCGGCTAAGTTCCCG+CGG | 0.702835 | 7_4:+6680748 | Msa1137730:CDS |
| GTTGTTAAGACTAAACCAAG+GGG | 0.704700 | 7_4:+6680006 | Msa1137730:CDS |
| ATACAAGCTTCTCCTCCAAG+GGG | 0.713925 | 7_4:+6679913 | Msa1137730:CDS |
| TAACCATCAAGTAACGACCG+CGG | 0.740683 | 7_4:-6680765 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATCAACATCAAATAGA+AGG | - | chr7_4:6681022-6681041 | None:intergenic | 20.0% |
| !!! | TTTTATCAACATCAAATAGA+AGG | - | chr7_4:6681022-6681041 | None:intergenic | 20.0% |
| !! | GCAGTAGAAAATGTAATTTT+AGG | + | chr7_4:6679871-6679890 | Msa1137730:CDS | 25.0% |
| !! | GTAGAAAATGTAATTTTAGG+TGG | + | chr7_4:6679874-6679893 | Msa1137730:CDS | 25.0% |
| ! | TTCAAATGGAGGATAATATA+TGG | + | chr7_4:6680079-6680098 | Msa1137730:CDS | 25.0% |
| ! | TCAAATGGAGGATAATATAT+GGG | + | chr7_4:6680080-6680099 | Msa1137730:CDS | 25.0% |
| !!! | ATTCTATACCAAGTTTTAAG+AGG | - | chr7_4:6680315-6680334 | None:intergenic | 25.0% |
| !! | TGTTGATTAAAATGCATACT+TGG | - | chr7_4:6680474-6680493 | None:intergenic | 25.0% |
| !!! | GTATGCATTTTAATCAACAA+AGG | + | chr7_4:6680475-6680494 | Msa1137730:CDS | 25.0% |
| ! | TTTGAGTCATAAATTTCAGT+CGG | - | chr7_4:6680582-6680601 | None:intergenic | 25.0% |
| ! | AATAATGAACGAAAATACCT+TGG | - | chr7_4:6680921-6680940 | None:intergenic | 25.0% |
| !! | TTGATGTTGATAAAAAGATC+TGG | + | chr7_4:6681027-6681046 | Msa1137730:CDS | 25.0% |
| !! | GCAGTAGAAAATGTAATTTT+AGG | + | chr7_4:6679871-6679890 | Msa1137730:CDS | 25.0% |
| !! | GTAGAAAATGTAATTTTAGG+TGG | + | chr7_4:6679874-6679893 | Msa1137730:CDS | 25.0% |
| ! | TTCAAATGGAGGATAATATA+TGG | + | chr7_4:6680079-6680098 | Msa1137730:CDS | 25.0% |
| ! | TCAAATGGAGGATAATATAT+GGG | + | chr7_4:6680080-6680099 | Msa1137730:CDS | 25.0% |
| !!! | ATTCTATACCAAGTTTTAAG+AGG | - | chr7_4:6680315-6680334 | None:intergenic | 25.0% |
| !! | TGTTGATTAAAATGCATACT+TGG | - | chr7_4:6680474-6680493 | None:intergenic | 25.0% |
| !!! | GTATGCATTTTAATCAACAA+AGG | + | chr7_4:6680475-6680494 | Msa1137730:CDS | 25.0% |
| ! | TTTGAGTCATAAATTTCAGT+CGG | - | chr7_4:6680582-6680601 | None:intergenic | 25.0% |
| ! | AATAATGAACGAAAATACCT+TGG | - | chr7_4:6680921-6680940 | None:intergenic | 25.0% |
| !! | TTGATGTTGATAAAAAGATC+TGG | + | chr7_4:6681027-6681046 | Msa1137730:CDS | 25.0% |
| TAGGGAAATCTTCTGAATTA+GGG | + | chr7_4:6679827-6679846 | Msa1137730:CDS | 30.0% | |
| TTACAGAAACTAAGAACACA+AGG | - | chr7_4:6680255-6680274 | None:intergenic | 30.0% | |
| AACTGTAAACAGAACATTGT+GGG | - | chr7_4:6680290-6680309 | None:intergenic | 30.0% | |
| AAACTGTAAACAGAACATTG+TGG | - | chr7_4:6680291-6680310 | None:intergenic | 30.0% | |
| ACAGTTTACCTCTTAAAACT+TGG | + | chr7_4:6680304-6680323 | Msa1137730:CDS | 30.0% | |
| !! | AACTGATAATGGTTGTTGAT+AGG | + | chr7_4:6680499-6680518 | Msa1137730:CDS | 30.0% |
| GTCACTACATATATCATTAG+TGG | - | chr7_4:6680550-6680569 | None:intergenic | 30.0% | |
| GACTGAAATTTATGACTCAA+AGG | + | chr7_4:6680581-6680600 | Msa1137730:CDS | 30.0% | |
| ATGACTCAAAGGAAGATAAA+TGG | + | chr7_4:6680592-6680611 | Msa1137730:CDS | 30.0% | |
| ! | CATCTTTGAAGAACAAAGAT+TGG | - | chr7_4:6680643-6680662 | None:intergenic | 30.0% |
| CAATCTTTGTTCTTCAAAGA+TGG | + | chr7_4:6680641-6680660 | Msa1137730:CDS | 30.0% | |
| ACAGACTAGATATAAATCGT+TGG | + | chr7_4:6680721-6680740 | Msa1137730:CDS | 30.0% | |
| CAGACTAGATATAAATCGTT+GGG | + | chr7_4:6680722-6680741 | Msa1137730:CDS | 30.0% | |
| TCTGCAGAGTATAAGAATTT+GGG | + | chr7_4:6680848-6680867 | Msa1137730:CDS | 30.0% | |
| GAGTATAAGAATTTGGGAAT+TGG | + | chr7_4:6680854-6680873 | Msa1137730:CDS | 30.0% | |
| TCGTTCATTATTGAGATTGT+CGG | + | chr7_4:6680929-6680948 | Msa1137730:CDS | 30.0% | |
| TTGATAAAAAGATCTGGTCT+TGG | + | chr7_4:6681033-6681052 | Msa1137730:CDS | 30.0% | |
| TAGGGAAATCTTCTGAATTA+GGG | + | chr7_4:6679827-6679846 | Msa1137730:CDS | 30.0% | |
| TTACAGAAACTAAGAACACA+AGG | - | chr7_4:6680255-6680274 | None:intergenic | 30.0% | |
| AACTGTAAACAGAACATTGT+GGG | - | chr7_4:6680290-6680309 | None:intergenic | 30.0% | |
| AAACTGTAAACAGAACATTG+TGG | - | chr7_4:6680291-6680310 | None:intergenic | 30.0% | |
| ACAGTTTACCTCTTAAAACT+TGG | + | chr7_4:6680304-6680323 | Msa1137730:CDS | 30.0% | |
| !! | AACTGATAATGGTTGTTGAT+AGG | + | chr7_4:6680499-6680518 | Msa1137730:CDS | 30.0% |
| GTCACTACATATATCATTAG+TGG | - | chr7_4:6680550-6680569 | None:intergenic | 30.0% | |
| GACTGAAATTTATGACTCAA+AGG | + | chr7_4:6680581-6680600 | Msa1137730:CDS | 30.0% | |
| ATGACTCAAAGGAAGATAAA+TGG | + | chr7_4:6680592-6680611 | Msa1137730:CDS | 30.0% | |
| ! | CATCTTTGAAGAACAAAGAT+TGG | - | chr7_4:6680643-6680662 | None:intergenic | 30.0% |
| CAATCTTTGTTCTTCAAAGA+TGG | + | chr7_4:6680641-6680660 | Msa1137730:CDS | 30.0% | |
| ACAGACTAGATATAAATCGT+TGG | + | chr7_4:6680721-6680740 | Msa1137730:CDS | 30.0% | |
| CAGACTAGATATAAATCGTT+GGG | + | chr7_4:6680722-6680741 | Msa1137730:CDS | 30.0% | |
| TCTGCAGAGTATAAGAATTT+GGG | + | chr7_4:6680848-6680867 | Msa1137730:CDS | 30.0% | |
| GAGTATAAGAATTTGGGAAT+TGG | + | chr7_4:6680854-6680873 | Msa1137730:CDS | 30.0% | |
| TCGTTCATTATTGAGATTGT+CGG | + | chr7_4:6680929-6680948 | Msa1137730:CDS | 30.0% | |
| TTGATAAAAAGATCTGGTCT+TGG | + | chr7_4:6681033-6681052 | Msa1137730:CDS | 30.0% | |
| GTAGGGAAATCTTCTGAATT+AGG | + | chr7_4:6679826-6679845 | Msa1137730:CDS | 35.0% | |
| AAATCTTCTGAATTAGGGTC+TGG | + | chr7_4:6679832-6679851 | Msa1137730:CDS | 35.0% | |
| ATCAAGGAATACTAGTCCAA+TGG | + | chr7_4:6679942-6679961 | Msa1137730:CDS | 35.0% | |
| TCAAGGAATACTAGTCCAAT+GGG | + | chr7_4:6679943-6679962 | Msa1137730:CDS | 35.0% | |
| ! | TTAACAACCTTTTGCCTTGA+AGG | - | chr7_4:6679994-6680013 | None:intergenic | 35.0% |
| AGGTTGTTAAGACTAAACCA+AGG | + | chr7_4:6680004-6680023 | Msa1137730:CDS | 35.0% | |
| GGTTGTTAAGACTAAACCAA+GGG | + | chr7_4:6680005-6680024 | Msa1137730:CDS | 35.0% | |
| GTTGTTAAGACTAAACCAAG+GGG | + | chr7_4:6680006-6680025 | Msa1137730:CDS | 35.0% | |
| GAAGAAACACATGCTACATT+TGG | + | chr7_4:6680036-6680055 | Msa1137730:CDS | 35.0% | |
| AGTTCATGCTGATGTTCAAA+TGG | + | chr7_4:6680065-6680084 | Msa1137730:CDS | 35.0% | |
| ATCTCATGTAACAAATCCTC+AGG | - | chr7_4:6680114-6680133 | None:intergenic | 35.0% | |
| ! | TTTCACATTTTTGCCGCATT+GGG | + | chr7_4:6680338-6680357 | Msa1137730:CDS | 35.0% |
| TCAACAAAGGCAACTGATAA+TGG | + | chr7_4:6680488-6680507 | Msa1137730:CDS | 35.0% | |
| CTCAAAGGAAGATAAATGGT+CGG | + | chr7_4:6680596-6680615 | Msa1137730:CDS | 35.0% | |
| TTGTGATTCTAGGTTGTACT+TGG | + | chr7_4:6680668-6680687 | Msa1137730:CDS | 35.0% | |
| AAATCGTTGGGAACATATTC+CGG | + | chr7_4:6680734-6680753 | Msa1137730:CDS | 35.0% | |
| CTCTGCAGAGTATAAGAATT+TGG | + | chr7_4:6680847-6680866 | Msa1137730:CDS | 35.0% | |
| AATGAACGAAAATACCTTGG+CGG | - | chr7_4:6680918-6680937 | None:intergenic | 35.0% | |
| TGCTTCACATCTTATAACCA+AGG | + | chr7_4:6680990-6681009 | Msa1137730:CDS | 35.0% | |
| GCTTCACATCTTATAACCAA+GGG | + | chr7_4:6680991-6681010 | Msa1137730:CDS | 35.0% | |
| ACATCTTATAACCAAGGGAA+GGG | + | chr7_4:6680996-6681015 | Msa1137730:CDS | 35.0% | |
| !! | AAAAAGATCTGGTCTTGGAT+TGG | + | chr7_4:6681038-6681057 | Msa1137730:CDS | 35.0% |
| !!! | AAGCTTGTTTTTATGAGCCA+AGG | + | chr7_4:6681090-6681109 | Msa1137730:CDS | 35.0% |
| !! | TAGATAGAAGCATCAAACCT+TGG | - | chr7_4:6681110-6681129 | None:intergenic | 35.0% |
| GTAGGGAAATCTTCTGAATT+AGG | + | chr7_4:6679826-6679845 | Msa1137730:CDS | 35.0% | |
| AAATCTTCTGAATTAGGGTC+TGG | + | chr7_4:6679832-6679851 | Msa1137730:CDS | 35.0% | |
| ATCAAGGAATACTAGTCCAA+TGG | + | chr7_4:6679942-6679961 | Msa1137730:CDS | 35.0% | |
| TCAAGGAATACTAGTCCAAT+GGG | + | chr7_4:6679943-6679962 | Msa1137730:CDS | 35.0% | |
| ! | TTAACAACCTTTTGCCTTGA+AGG | - | chr7_4:6679994-6680013 | None:intergenic | 35.0% |
| AGGTTGTTAAGACTAAACCA+AGG | + | chr7_4:6680004-6680023 | Msa1137730:CDS | 35.0% | |
| GGTTGTTAAGACTAAACCAA+GGG | + | chr7_4:6680005-6680024 | Msa1137730:CDS | 35.0% | |
| GTTGTTAAGACTAAACCAAG+GGG | + | chr7_4:6680006-6680025 | Msa1137730:CDS | 35.0% | |
| GAAGAAACACATGCTACATT+TGG | + | chr7_4:6680036-6680055 | Msa1137730:CDS | 35.0% | |
| AGTTCATGCTGATGTTCAAA+TGG | + | chr7_4:6680065-6680084 | Msa1137730:CDS | 35.0% | |
| ATCTCATGTAACAAATCCTC+AGG | - | chr7_4:6680114-6680133 | None:intergenic | 35.0% | |
| ! | TTTCACATTTTTGCCGCATT+GGG | + | chr7_4:6680338-6680357 | Msa1137730:CDS | 35.0% |
| TCAACAAAGGCAACTGATAA+TGG | + | chr7_4:6680488-6680507 | Msa1137730:CDS | 35.0% | |
| CTCAAAGGAAGATAAATGGT+CGG | + | chr7_4:6680596-6680615 | Msa1137730:CDS | 35.0% | |
| TTGTGATTCTAGGTTGTACT+TGG | + | chr7_4:6680668-6680687 | Msa1137730:CDS | 35.0% | |
| AAATCGTTGGGAACATATTC+CGG | + | chr7_4:6680734-6680753 | Msa1137730:CDS | 35.0% | |
| CTCTGCAGAGTATAAGAATT+TGG | + | chr7_4:6680847-6680866 | Msa1137730:CDS | 35.0% | |
| AATGAACGAAAATACCTTGG+CGG | - | chr7_4:6680918-6680937 | None:intergenic | 35.0% | |
| TGCTTCACATCTTATAACCA+AGG | + | chr7_4:6680990-6681009 | Msa1137730:CDS | 35.0% | |
| GCTTCACATCTTATAACCAA+GGG | + | chr7_4:6680991-6681010 | Msa1137730:CDS | 35.0% | |
| ACATCTTATAACCAAGGGAA+GGG | + | chr7_4:6680996-6681015 | Msa1137730:CDS | 35.0% | |
| !! | AAAAAGATCTGGTCTTGGAT+TGG | + | chr7_4:6681038-6681057 | Msa1137730:CDS | 35.0% |
| !!! | AAGCTTGTTTTTATGAGCCA+AGG | + | chr7_4:6681090-6681109 | Msa1137730:CDS | 35.0% |
| !! | TAGATAGAAGCATCAAACCT+TGG | - | chr7_4:6681110-6681129 | None:intergenic | 35.0% |
| ! | TTAGGGTCTGGTGTTAGTAT+TGG | + | chr7_4:6679844-6679863 | Msa1137730:CDS | 40.0% |
| TATACAAGCTTCTCCTCCAA+GGG | + | chr7_4:6679912-6679931 | Msa1137730:CDS | 40.0% | |
| GTTTCTTCATCTAAACCCCT+TGG | - | chr7_4:6680024-6680043 | None:intergenic | 40.0% | |
| TCATGCTGATGTTCAAATGG+AGG | + | chr7_4:6680068-6680087 | Msa1137730:CDS | 40.0% | |
| ! | GTTTCACATTTTTGCCGCAT+TGG | + | chr7_4:6680337-6680356 | Msa1137730:CDS | 40.0% |
| !!! | GTGGTCTTGTTTGCTTTTCT+GGG | + | chr7_4:6680385-6680404 | Msa1137730:CDS | 40.0% |
| ! | TTTTCTCCAGGTTTGAGTGA+GGG | - | chr7_4:6680448-6680467 | None:intergenic | 40.0% |
| ! | ATTTTCTCCAGGTTTGAGTG+AGG | - | chr7_4:6680449-6680468 | None:intergenic | 40.0% |
| ! | CATACTTGGCAATTTTCTCC+AGG | - | chr7_4:6680460-6680479 | None:intergenic | 40.0% |
| GAAGAACAAAGATTGGAAGC+TGG | - | chr7_4:6680636-6680655 | None:intergenic | 40.0% | |
| AGATGGCGTATTGTGATTCT+AGG | + | chr7_4:6680658-6680677 | Msa1137730:CDS | 40.0% | |
| CTGTACATCATCAAACCAAG+CGG | - | chr7_4:6680705-6680724 | None:intergenic | 40.0% | |
| ! | GTCGTTACTTGATGGTTACT+TGG | + | chr7_4:6680770-6680789 | Msa1137730:CDS | 40.0% |
| !! | AGAAGCGGCTTTTTCTTGTT+GGG | + | chr7_4:6680805-6680824 | Msa1137730:CDS | 40.0% |
| ! | CTTTTTCTTGTTGGGAGGAT+TGG | + | chr7_4:6680813-6680832 | Msa1137730:CDS | 40.0% |
| ! | TACTCTGCAGAGTGCTATAA+AGG | - | chr7_4:6680839-6680858 | None:intergenic | 40.0% |
| ! | TGGATCATGCCAAGATTTTG+TGG | + | chr7_4:6680874-6680893 | Msa1137730:CDS | 40.0% |
| ! | GGATCATGCCAAGATTTTGT+GGG | + | chr7_4:6680875-6680894 | Msa1137730:CDS | 40.0% |
| ! | GATCATGCCAAGATTTTGTG+GGG | + | chr7_4:6680876-6680895 | Msa1137730:CDS | 40.0% |
| ! | ATCATGCCAAGATTTTGTGG+GGG | + | chr7_4:6680877-6680896 | Msa1137730:CDS | 40.0% |
| GCTGAGAGATTTGAATGCTT+TGG | + | chr7_4:6680951-6680970 | Msa1137730:CDS | 40.0% | |
| CACATCTTATAACCAAGGGA+AGG | + | chr7_4:6680995-6681014 | Msa1137730:CDS | 40.0% | |
| ! | TTAGGGTCTGGTGTTAGTAT+TGG | + | chr7_4:6679844-6679863 | Msa1137730:CDS | 40.0% |
| TATACAAGCTTCTCCTCCAA+GGG | + | chr7_4:6679912-6679931 | Msa1137730:CDS | 40.0% | |
| GTTTCTTCATCTAAACCCCT+TGG | - | chr7_4:6680024-6680043 | None:intergenic | 40.0% | |
| TCATGCTGATGTTCAAATGG+AGG | + | chr7_4:6680068-6680087 | Msa1137730:CDS | 40.0% | |
| ! | GTTTCACATTTTTGCCGCAT+TGG | + | chr7_4:6680337-6680356 | Msa1137730:CDS | 40.0% |
| !!! | GTGGTCTTGTTTGCTTTTCT+GGG | + | chr7_4:6680385-6680404 | Msa1137730:CDS | 40.0% |
| ! | TTTTCTCCAGGTTTGAGTGA+GGG | - | chr7_4:6680448-6680467 | None:intergenic | 40.0% |
| ! | ATTTTCTCCAGGTTTGAGTG+AGG | - | chr7_4:6680449-6680468 | None:intergenic | 40.0% |
| ! | CATACTTGGCAATTTTCTCC+AGG | - | chr7_4:6680460-6680479 | None:intergenic | 40.0% |
| GAAGAACAAAGATTGGAAGC+TGG | - | chr7_4:6680636-6680655 | None:intergenic | 40.0% | |
| AGATGGCGTATTGTGATTCT+AGG | + | chr7_4:6680658-6680677 | Msa1137730:CDS | 40.0% | |
| CTGTACATCATCAAACCAAG+CGG | - | chr7_4:6680705-6680724 | None:intergenic | 40.0% | |
| ! | GTCGTTACTTGATGGTTACT+TGG | + | chr7_4:6680770-6680789 | Msa1137730:CDS | 40.0% |
| !! | AGAAGCGGCTTTTTCTTGTT+GGG | + | chr7_4:6680805-6680824 | Msa1137730:CDS | 40.0% |
| ! | CTTTTTCTTGTTGGGAGGAT+TGG | + | chr7_4:6680813-6680832 | Msa1137730:CDS | 40.0% |
| ! | TACTCTGCAGAGTGCTATAA+AGG | - | chr7_4:6680839-6680858 | None:intergenic | 40.0% |
| ! | TGGATCATGCCAAGATTTTG+TGG | + | chr7_4:6680874-6680893 | Msa1137730:CDS | 40.0% |
| ! | GGATCATGCCAAGATTTTGT+GGG | + | chr7_4:6680875-6680894 | Msa1137730:CDS | 40.0% |
| ! | GATCATGCCAAGATTTTGTG+GGG | + | chr7_4:6680876-6680895 | Msa1137730:CDS | 40.0% |
| ! | ATCATGCCAAGATTTTGTGG+GGG | + | chr7_4:6680877-6680896 | Msa1137730:CDS | 40.0% |
| GCTGAGAGATTTGAATGCTT+TGG | + | chr7_4:6680951-6680970 | Msa1137730:CDS | 40.0% | |
| CACATCTTATAACCAAGGGA+AGG | + | chr7_4:6680995-6681014 | Msa1137730:CDS | 40.0% | |
| GTATACAAGCTTCTCCTCCA+AGG | + | chr7_4:6679911-6679930 | Msa1137730:CDS | 45.0% | |
| ATACAAGCTTCTCCTCCAAG+GGG | + | chr7_4:6679913-6679932 | Msa1137730:CDS | 45.0% | |
| TTCCTTGATCCATTTCCCCT+TGG | - | chr7_4:6679931-6679950 | None:intergenic | 45.0% | |
| ! | TATATGGGCTATGTTGCCTG+AGG | + | chr7_4:6680095-6680114 | Msa1137730:CDS | 45.0% |
| ! | TTCCGCCGTTTCTGATTTTC+CGG | + | chr7_4:6680145-6680164 | Msa1137730:CDS | 45.0% |
| CGAAGCCGGAAAATCAGAAA+CGG | - | chr7_4:6680153-6680172 | None:intergenic | 45.0% | |
| ! | TTCGCTCGGTTTGTAAGAGA+TGG | + | chr7_4:6680169-6680188 | Msa1137730:CDS | 45.0% |
| AGAACACAAGGTCCATGTGA+TGG | - | chr7_4:6680243-6680262 | None:intergenic | 45.0% | |
| !!! | GGTGGTCTTGTTTGCTTTTC+TGG | + | chr7_4:6680384-6680403 | Msa1137730:CDS | 45.0% |
| TTTCTCCAGGTTTGAGTGAG+GGG | - | chr7_4:6680447-6680466 | None:intergenic | 45.0% | |
| TAACCATCAAGTAACGACCG+CGG | - | chr7_4:6680768-6680787 | None:intergenic | 45.0% | |
| ! | CTTGATGGTTACTTGGTTGC+CGG | + | chr7_4:6680777-6680796 | Msa1137730:CDS | 45.0% |
| AAAAAGCCGCTTCTGAGTAC+CGG | - | chr7_4:6680799-6680818 | None:intergenic | 45.0% | |
| !! | CAGAAGCGGCTTTTTCTTGT+TGG | + | chr7_4:6680804-6680823 | Msa1137730:CDS | 45.0% |
| ! | TCATGCCAAGATTTTGTGGG+GGG | + | chr7_4:6680878-6680897 | Msa1137730:CDS | 45.0% |
| !! | AAGATCTGGTCTTGGATTGG+TGG | + | chr7_4:6681041-6681060 | Msa1137730:CDS | 45.0% |
| !! | AGATCTGGTCTTGGATTGGT+GGG | + | chr7_4:6681042-6681061 | Msa1137730:CDS | 45.0% |
| GTATACAAGCTTCTCCTCCA+AGG | + | chr7_4:6679911-6679930 | Msa1137730:CDS | 45.0% | |
| ATACAAGCTTCTCCTCCAAG+GGG | + | chr7_4:6679913-6679932 | Msa1137730:CDS | 45.0% | |
| TTCCTTGATCCATTTCCCCT+TGG | - | chr7_4:6679931-6679950 | None:intergenic | 45.0% | |
| ! | TATATGGGCTATGTTGCCTG+AGG | + | chr7_4:6680095-6680114 | Msa1137730:CDS | 45.0% |
| ! | TTCCGCCGTTTCTGATTTTC+CGG | + | chr7_4:6680145-6680164 | Msa1137730:CDS | 45.0% |
| CGAAGCCGGAAAATCAGAAA+CGG | - | chr7_4:6680153-6680172 | None:intergenic | 45.0% | |
| ! | TTCGCTCGGTTTGTAAGAGA+TGG | + | chr7_4:6680169-6680188 | Msa1137730:CDS | 45.0% |
| AGAACACAAGGTCCATGTGA+TGG | - | chr7_4:6680243-6680262 | None:intergenic | 45.0% | |
| !!! | GGTGGTCTTGTTTGCTTTTC+TGG | + | chr7_4:6680384-6680403 | Msa1137730:CDS | 45.0% |
| TTTCTCCAGGTTTGAGTGAG+GGG | - | chr7_4:6680447-6680466 | None:intergenic | 45.0% | |
| TAACCATCAAGTAACGACCG+CGG | - | chr7_4:6680768-6680787 | None:intergenic | 45.0% | |
| ! | CTTGATGGTTACTTGGTTGC+CGG | + | chr7_4:6680777-6680796 | Msa1137730:CDS | 45.0% |
| AAAAAGCCGCTTCTGAGTAC+CGG | - | chr7_4:6680799-6680818 | None:intergenic | 45.0% | |
| !! | CAGAAGCGGCTTTTTCTTGT+TGG | + | chr7_4:6680804-6680823 | Msa1137730:CDS | 45.0% |
| ! | TCATGCCAAGATTTTGTGGG+GGG | + | chr7_4:6680878-6680897 | Msa1137730:CDS | 45.0% |
| !! | AAGATCTGGTCTTGGATTGG+TGG | + | chr7_4:6681041-6681060 | Msa1137730:CDS | 45.0% |
| !! | AGATCTGGTCTTGGATTGGT+GGG | + | chr7_4:6681042-6681061 | Msa1137730:CDS | 45.0% |
| CTTGATCCATTTCCCCTTGG+AGG | - | chr7_4:6679928-6679947 | None:intergenic | 50.0% | |
| CTCCAAGGGGAAATGGATCA+AGG | + | chr7_4:6679926-6679945 | Msa1137730:CDS | 50.0% | |
| ACTAGTCCAATGGGTCGAGT+CGG | + | chr7_4:6679952-6679971 | Msa1137730:CDS | 50.0% | |
| CACGAGTCCTTCAAGGCAAA+AGG | + | chr7_4:6679984-6680003 | Msa1137730:CDS | 50.0% | |
| AGCCGGAAAATCAGAAACGG+CGG | - | chr7_4:6680150-6680169 | None:intergenic | 50.0% | |
| ! | TCTGATTTTCCGGCTTCGCT+CGG | + | chr7_4:6680155-6680174 | Msa1137730:CDS | 50.0% |
| TCTTACAAACCGAGCGAAGC+CGG | - | chr7_4:6680167-6680186 | None:intergenic | 50.0% | |
| CATTCGAGTGTGCCATCACA+TGG | + | chr7_4:6680228-6680247 | Msa1137730:CDS | 50.0% | |
| ! | ATTGGGCGATCTGGTTGGTT+GGG | + | chr7_4:6680355-6680374 | Msa1137730:CDS | 50.0% |
| ! | ATCTGGTTGGTTGGGTCTTC+TGG | + | chr7_4:6680363-6680382 | Msa1137730:CDS | 50.0% |
| !! | GTTTGCTTTTCTGGGTGCGA+AGG | + | chr7_4:6680393-6680412 | Msa1137730:CDS | 50.0% |
| ! | CTTTTCTGGGTGCGAAGGAT+CGG | + | chr7_4:6680398-6680417 | Msa1137730:CDS | 50.0% |
| GTAATCCCCTCACTCAAACC+TGG | + | chr7_4:6680439-6680458 | Msa1137730:CDS | 50.0% | |
| TGGAAGCTGGCATAGTCTGA+TGG | - | chr7_4:6680623-6680642 | None:intergenic | 50.0% | |
| CATCAAACCAAGCGGCGAAA+GGG | - | chr7_4:6680697-6680716 | None:intergenic | 50.0% | |
| TCATCAAACCAAGCGGCGAA+AGG | - | chr7_4:6680698-6680717 | None:intergenic | 50.0% | |
| ATATTCCGGCTAAGTTCCCG+CGG | + | chr7_4:6680748-6680767 | Msa1137730:CDS | 50.0% | |
| AACCATCAAGTAACGACCGC+GGG | - | chr7_4:6680767-6680786 | None:intergenic | 50.0% | |
| !! | AGCGGCTTTTTCTTGTTGGG+AGG | + | chr7_4:6680808-6680827 | Msa1137730:CDS | 50.0% |
| GATCTCCCCCCACAAAATCT+TGG | - | chr7_4:6680886-6680905 | None:intergenic | 50.0% | |
| ! | TTTTGTGGGGGGAGATCAGT+AGG | + | chr7_4:6680889-6680908 | Msa1137730:CDS | 50.0% |
| CAAATAGAAGGCCCTTCCCT+TGG | - | chr7_4:6681010-6681029 | None:intergenic | 50.0% | |
| CTTGATCCATTTCCCCTTGG+AGG | - | chr7_4:6679928-6679947 | None:intergenic | 50.0% | |
| CTCCAAGGGGAAATGGATCA+AGG | + | chr7_4:6679926-6679945 | Msa1137730:CDS | 50.0% | |
| ACTAGTCCAATGGGTCGAGT+CGG | + | chr7_4:6679952-6679971 | Msa1137730:CDS | 50.0% | |
| CACGAGTCCTTCAAGGCAAA+AGG | + | chr7_4:6679984-6680003 | Msa1137730:CDS | 50.0% | |
| AGCCGGAAAATCAGAAACGG+CGG | - | chr7_4:6680150-6680169 | None:intergenic | 50.0% | |
| ! | TCTGATTTTCCGGCTTCGCT+CGG | + | chr7_4:6680155-6680174 | Msa1137730:CDS | 50.0% |
| TCTTACAAACCGAGCGAAGC+CGG | - | chr7_4:6680167-6680186 | None:intergenic | 50.0% | |
| CATTCGAGTGTGCCATCACA+TGG | + | chr7_4:6680228-6680247 | Msa1137730:CDS | 50.0% | |
| ! | ATTGGGCGATCTGGTTGGTT+GGG | + | chr7_4:6680355-6680374 | Msa1137730:CDS | 50.0% |
| ! | ATCTGGTTGGTTGGGTCTTC+TGG | + | chr7_4:6680363-6680382 | Msa1137730:CDS | 50.0% |
| !! | GTTTGCTTTTCTGGGTGCGA+AGG | + | chr7_4:6680393-6680412 | Msa1137730:CDS | 50.0% |
| ! | CTTTTCTGGGTGCGAAGGAT+CGG | + | chr7_4:6680398-6680417 | Msa1137730:CDS | 50.0% |
| GTAATCCCCTCACTCAAACC+TGG | + | chr7_4:6680439-6680458 | Msa1137730:CDS | 50.0% | |
| TGGAAGCTGGCATAGTCTGA+TGG | - | chr7_4:6680623-6680642 | None:intergenic | 50.0% | |
| CATCAAACCAAGCGGCGAAA+GGG | - | chr7_4:6680697-6680716 | None:intergenic | 50.0% | |
| TCATCAAACCAAGCGGCGAA+AGG | - | chr7_4:6680698-6680717 | None:intergenic | 50.0% | |
| ATATTCCGGCTAAGTTCCCG+CGG | + | chr7_4:6680748-6680767 | Msa1137730:CDS | 50.0% | |
| AACCATCAAGTAACGACCGC+GGG | - | chr7_4:6680767-6680786 | None:intergenic | 50.0% | |
| !! | AGCGGCTTTTTCTTGTTGGG+AGG | + | chr7_4:6680808-6680827 | Msa1137730:CDS | 50.0% |
| GATCTCCCCCCACAAAATCT+TGG | - | chr7_4:6680886-6680905 | None:intergenic | 50.0% | |
| ! | TTTTGTGGGGGGAGATCAGT+AGG | + | chr7_4:6680889-6680908 | Msa1137730:CDS | 50.0% |
| CAAATAGAAGGCCCTTCCCT+TGG | - | chr7_4:6681010-6681029 | None:intergenic | 50.0% | |
| GCTTCTCCTCCAAGGGGAAA+TGG | + | chr7_4:6679919-6679938 | Msa1137730:CDS | 55.0% | |
| CTAGTCCAATGGGTCGAGTC+GGG | + | chr7_4:6679953-6679972 | Msa1137730:CDS | 55.0% | |
| CGAGGAACACGAGTCCTTCA+AGG | + | chr7_4:6679977-6679996 | Msa1137730:CDS | 55.0% | |
| ! | TTTTGCCGCATTGGGCGATC+TGG | + | chr7_4:6680346-6680365 | Msa1137730:CDS | 55.0% |
| ACCAACCAGATCGCCCAATG+CGG | - | chr7_4:6680354-6680373 | None:intergenic | 55.0% | |
| CATTGGGCGATCTGGTTGGT+TGG | + | chr7_4:6680354-6680373 | Msa1137730:CDS | 55.0% | |
| ! | TGGTTGGTTGGGTCTTCTGG+TGG | + | chr7_4:6680366-6680385 | Msa1137730:CDS | 55.0% |
| TTGGAAACCCTTTCGCCGCT+TGG | + | chr7_4:6680687-6680706 | Msa1137730:CDS | 55.0% | |
| TTCCCGCGGTCGTTACTTGA+TGG | + | chr7_4:6680762-6680781 | Msa1137730:CDS | 55.0% | |
| TGGTTGCCGGTACTCAGAAG+CGG | + | chr7_4:6680790-6680809 | Msa1137730:CDS | 55.0% | |
| AGATCAGTAGGATGCCGCCA+AGG | + | chr7_4:6680901-6680920 | Msa1137730:CDS | 55.0% | |
| GCTTCTCCTCCAAGGGGAAA+TGG | + | chr7_4:6679919-6679938 | Msa1137730:CDS | 55.0% | |
| CTAGTCCAATGGGTCGAGTC+GGG | + | chr7_4:6679953-6679972 | Msa1137730:CDS | 55.0% | |
| CGAGGAACACGAGTCCTTCA+AGG | + | chr7_4:6679977-6679996 | Msa1137730:CDS | 55.0% | |
| ! | TTTTGCCGCATTGGGCGATC+TGG | + | chr7_4:6680346-6680365 | Msa1137730:CDS | 55.0% |
| ACCAACCAGATCGCCCAATG+CGG | - | chr7_4:6680354-6680373 | None:intergenic | 55.0% | |
| CATTGGGCGATCTGGTTGGT+TGG | + | chr7_4:6680354-6680373 | Msa1137730:CDS | 55.0% | |
| ! | TGGTTGGTTGGGTCTTCTGG+TGG | + | chr7_4:6680366-6680385 | Msa1137730:CDS | 55.0% |
| TTGGAAACCCTTTCGCCGCT+TGG | + | chr7_4:6680687-6680706 | Msa1137730:CDS | 55.0% | |
| TTCCCGCGGTCGTTACTTGA+TGG | + | chr7_4:6680762-6680781 | Msa1137730:CDS | 55.0% | |
| TGGTTGCCGGTACTCAGAAG+CGG | + | chr7_4:6680790-6680809 | Msa1137730:CDS | 55.0% | |
| AGATCAGTAGGATGCCGCCA+AGG | + | chr7_4:6680901-6680920 | Msa1137730:CDS | 55.0% | |
| AACGACCGCGGGAACTTAGC+CGG | - | chr7_4:6680756-6680775 | None:intergenic | 60.0% | |
| AACGACCGCGGGAACTTAGC+CGG | - | chr7_4:6680756-6680775 | None:intergenic | 60.0% | |
| ! | CTCGACCCGACTCGACCCAT+TGG | - | chr7_4:6679961-6679980 | None:intergenic | 65.0% |
| CAATGGGTCGAGTCGGGTCG+AGG | + | chr7_4:6679959-6679978 | Msa1137730:CDS | 65.0% | |
| GCCGCATTGGGCGATCTGGT+TGG | + | chr7_4:6680350-6680369 | Msa1137730:CDS | 65.0% | |
| ! | CTCGACCCGACTCGACCCAT+TGG | - | chr7_4:6679961-6679980 | None:intergenic | 65.0% |
| CAATGGGTCGAGTCGGGTCG+AGG | + | chr7_4:6679959-6679978 | Msa1137730:CDS | 65.0% | |
| GCCGCATTGGGCGATCTGGT+TGG | + | chr7_4:6680350-6680369 | Msa1137730:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 6679817 | 6681133 | 6679817 | ID=Msa1137730;Name=Msa1137730 |
| chr7_4 | mRNA | 6679817 | 6681133 | 6679817 | ID=Msa1137730-mRNA-1;Parent=Msa1137730;Name=Msa1137730-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|-1|0|1|-1|1|1|0|438 |
| chr7_4 | exon | 6679817 | 6681133 | 6679817 | ID=Msa1137730-mRNA-1:exon:1783;Parent=Msa1137730-mRNA-1 |
| chr7_4 | CDS | 6679817 | 6681133 | 6679817 | ID=Msa1137730-mRNA-1:cds;Parent=Msa1137730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
