Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169860 | XP_024627195.1 | 94.767 | 172 | 9 | 0 | 68 | 239 | 1 | 172 | 4.96e-115 | 336 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169860 | sp|Q9SLD4|ZAT11_ARATH | 48.864 | 176 | 82 | 6 | 68 | 237 | 1 | 174 | 3.36e-44 | 149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169860 | A0A396H512 | 94.767 | 172 | 9 | 0 | 68 | 239 | 1 | 172 | 2.37e-115 | 336 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1169860 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000820 | Msa1169860 | 0.835789 | 1.367435e-56 | -8.615850e-47 |
| Msa0119440 | Msa1169860 | 0.805203 | 1.495182e-49 | -8.615850e-47 |
| Msa0151220 | Msa1169860 | 0.830547 | 2.762086e-55 | -8.615850e-47 |
| Msa0437070 | Msa1169860 | 0.950372 | 1.887522e-108 | -8.615850e-47 |
| Msa0463490 | Msa1169860 | 0.837375 | 5.393995e-57 | -8.615850e-47 |
| Msa1078330 | Msa1169860 | 0.866578 | 2.572863e-65 | -8.615850e-47 |
| Msa0259440 | Msa1169860 | 0.812633 | 3.842382e-51 | -8.615850e-47 |
| Msa0259580 | Msa1169860 | 0.812577 | 3.953792e-51 | -8.615850e-47 |
| Msa0305620 | Msa1169860 | 0.818027 | 2.428507e-52 | -8.615850e-47 |
| Msa1123720 | Msa1169860 | 0.964042 | 7.867915e-123 | -8.615850e-47 |
| Msa1169860 | Msa1363810 | 0.800560 | 1.360820e-48 | -8.615850e-47 |
| Msa0572560 | Msa1169860 | 0.800425 | 1.449955e-48 | -8.615850e-47 |
| Msa0860250 | Msa1169860 | 0.853847 | 1.822381e-61 | -8.615850e-47 |
| Msa0968050 | Msa1169860 | 0.833246 | 5.953981e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169860 | MtrunA17_Chr7g0263121 | 94.767 | 172 | 9 | 0 | 68 | 239 | 1 | 172 | 4.57e-119 | 336 |
| Msa1169860 | MtrunA17_Chr7g0263131 | 68.452 | 168 | 39 | 4 | 67 | 233 | 2 | 156 | 3.54e-71 | 215 |
| Msa1169860 | MtrunA17_Chr1g0182181 | 65.269 | 167 | 50 | 4 | 72 | 236 | 2 | 162 | 3.83e-70 | 212 |
| Msa1169860 | MtrunA17_Chr1g0182161 | 60.795 | 176 | 52 | 7 | 68 | 236 | 2 | 167 | 5.36e-59 | 184 |
| Msa1169860 | MtrunA17_Chr1g0212561 | 39.901 | 203 | 81 | 8 | 68 | 235 | 1 | 197 | 5.43e-33 | 119 |
| Msa1169860 | MtrunA17_Chr7g0222831 | 52.586 | 116 | 49 | 3 | 68 | 183 | 1 | 110 | 2.06e-31 | 114 |
| Msa1169860 | MtrunA17_Chr7g0222831 | 36.129 | 155 | 60 | 5 | 3 | 149 | 1 | 124 | 7.56e-18 | 78.6 |
| Msa1169860 | MtrunA17_Chr2g0327901 | 48.667 | 150 | 51 | 6 | 76 | 224 | 4 | 128 | 4.76e-30 | 108 |
| Msa1169860 | MtrunA17_Chr2g0320311 | 34.703 | 219 | 76 | 8 | 73 | 225 | 66 | 283 | 4.75e-23 | 94.7 |
| Msa1169860 | MtrunA17_Chr2g0320311 | 32.576 | 132 | 50 | 4 | 29 | 134 | 119 | 237 | 4.28e-11 | 61.6 |
| Msa1169860 | MtrunA17_Chr1g0180311 | 40.136 | 147 | 47 | 3 | 81 | 186 | 80 | 226 | 5.13e-22 | 92.0 |
| Msa1169860 | MtrunA17_Chr1g0180311 | 34.503 | 171 | 85 | 6 | 16 | 160 | 80 | 249 | 4.03e-12 | 64.7 |
| Msa1169860 | MtrunA17_Chr1g0197281 | 34.450 | 209 | 72 | 8 | 78 | 223 | 98 | 304 | 5.18e-22 | 92.8 |
| Msa1169860 | MtrunA17_Chr1g0197281 | 34.746 | 118 | 41 | 2 | 37 | 134 | 156 | 257 | 7.70e-13 | 67.0 |
| Msa1169860 | MtrunA17_Chr1g0207451 | 50.000 | 100 | 44 | 2 | 82 | 181 | 60 | 153 | 4.68e-21 | 88.6 |
| Msa1169860 | MtrunA17_Chr4g0027991 | 36.364 | 165 | 45 | 5 | 111 | 225 | 113 | 267 | 2.36e-20 | 87.4 |
| Msa1169860 | MtrunA17_Chr7g0231181 | 41.379 | 116 | 52 | 6 | 111 | 223 | 240 | 342 | 2.93e-16 | 77.0 |
| Msa1169860 | MtrunA17_Chr1g0188901 | 39.516 | 124 | 58 | 3 | 111 | 217 | 60 | 183 | 5.53e-16 | 73.6 |
| Msa1169860 | MtrunA17_Chr1g0152661 | 38.462 | 117 | 55 | 2 | 82 | 181 | 43 | 159 | 6.39e-16 | 74.3 |
| Msa1169860 | MtrunA17_Chr3g0134711 | 40.171 | 117 | 49 | 3 | 82 | 181 | 52 | 164 | 4.18e-15 | 72.0 |
| Msa1169860 | MtrunA17_Chr4g0012691 | 37.903 | 124 | 59 | 4 | 111 | 217 | 220 | 342 | 7.94e-15 | 72.8 |
| Msa1169860 | MtrunA17_Chr4g0012691 | 43.269 | 104 | 33 | 5 | 35 | 133 | 218 | 300 | 2.64e-12 | 65.5 |
| Msa1169860 | MtrunA17_Chr5g0425411 | 31.132 | 212 | 93 | 6 | 3 | 181 | 15 | 206 | 1.37e-12 | 65.5 |
| Msa1169860 | MtrunA17_Chr4g0061301 | 41.071 | 112 | 53 | 4 | 35 | 133 | 346 | 457 | 5.22e-12 | 65.1 |
| Msa1169860 | MtrunA17_Chr5g0448611 | 30.978 | 184 | 86 | 4 | 39 | 181 | 50 | 233 | 8.36e-12 | 63.5 |
| Msa1169860 | MtrunA17_Chr4g0012791 | 37.391 | 115 | 61 | 3 | 30 | 133 | 220 | 334 | 8.98e-12 | 64.3 |
| Msa1169860 | MtrunA17_Chr4g0037041 | 37.647 | 85 | 45 | 1 | 97 | 181 | 19 | 95 | 6.05e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169860 | AT2G37430.1 | 48.864 | 176 | 82 | 6 | 68 | 237 | 1 | 174 | 3.42e-45 | 149 |
| Msa1169860 | AT3G53600.1 | 45.556 | 180 | 79 | 6 | 68 | 237 | 1 | 171 | 1.29e-39 | 135 |
| Msa1169860 | AT2G28710.1 | 45.294 | 170 | 71 | 8 | 68 | 231 | 1 | 154 | 7.83e-33 | 117 |
| Msa1169860 | AT3G46090.1 | 43.023 | 172 | 79 | 6 | 68 | 230 | 2 | 163 | 6.29e-28 | 105 |
| Msa1169860 | AT5G59820.1 | 40.698 | 172 | 70 | 8 | 73 | 230 | 6 | 159 | 1.84e-26 | 100 |
| Msa1169860 | AT5G59820.1 | 35.507 | 138 | 53 | 5 | 15 | 147 | 13 | 119 | 1.04e-12 | 64.3 |
| Msa1169860 | AT3G46080.1 | 39.181 | 171 | 85 | 5 | 68 | 230 | 2 | 161 | 1.23e-24 | 96.3 |
| Msa1169860 | AT2G28200.1 | 33.163 | 196 | 81 | 7 | 78 | 225 | 73 | 266 | 2.83e-24 | 98.2 |
| Msa1169860 | AT2G28200.1 | 39.496 | 119 | 52 | 4 | 28 | 134 | 103 | 213 | 1.57e-12 | 65.9 |
| Msa1169860 | AT3G46070.1 | 36.000 | 175 | 74 | 6 | 68 | 222 | 1 | 157 | 6.42e-22 | 89.4 |
| Msa1169860 | AT5G03510.1 | 37.306 | 193 | 74 | 8 | 78 | 223 | 69 | 261 | 9.18e-21 | 89.0 |
| Msa1169860 | AT5G03510.1 | 35.526 | 152 | 63 | 4 | 13 | 134 | 69 | 215 | 4.85e-17 | 79.0 |
| Msa1169860 | AT4G35280.1 | 34.722 | 216 | 92 | 9 | 39 | 217 | 79 | 282 | 2.34e-20 | 87.8 |
| Msa1169860 | AT4G35280.1 | 33.775 | 151 | 82 | 4 | 13 | 163 | 138 | 270 | 5.60e-11 | 61.6 |
| Msa1169860 | AT5G04390.1 | 29.870 | 231 | 83 | 7 | 75 | 226 | 93 | 323 | 4.96e-20 | 87.8 |
| Msa1169860 | AT2G45120.1 | 36.047 | 172 | 82 | 6 | 81 | 231 | 150 | 314 | 3.26e-19 | 85.1 |
| Msa1169860 | AT3G10470.1 | 45.192 | 104 | 26 | 3 | 111 | 183 | 182 | 285 | 3.55e-18 | 83.2 |
| Msa1169860 | AT3G10470.1 | 38.182 | 110 | 49 | 3 | 37 | 134 | 182 | 284 | 1.35e-13 | 69.7 |
| Msa1169860 | AT1G02030.1 | 50.000 | 78 | 38 | 1 | 111 | 187 | 160 | 237 | 5.61e-18 | 80.9 |
| Msa1169860 | AT1G02030.1 | 36.923 | 130 | 45 | 4 | 16 | 133 | 127 | 231 | 2.21e-11 | 62.4 |
| Msa1169860 | AT3G60580.1 | 34.302 | 172 | 79 | 7 | 81 | 228 | 126 | 287 | 6.08e-18 | 81.3 |
| Msa1169860 | AT3G49930.1 | 38.393 | 112 | 57 | 3 | 82 | 181 | 60 | 171 | 8.06e-17 | 76.6 |
| Msa1169860 | AT2G17180.1 | 29.665 | 209 | 110 | 5 | 39 | 217 | 67 | 268 | 1.60e-16 | 77.0 |
| Msa1169860 | AT3G19580.1 | 38.462 | 117 | 55 | 3 | 82 | 181 | 71 | 187 | 9.72e-16 | 74.7 |
| Msa1169860 | AT3G19580.2 | 38.462 | 117 | 55 | 3 | 82 | 181 | 71 | 187 | 9.72e-16 | 74.7 |
| Msa1169860 | AT5G43170.1 | 37.589 | 141 | 72 | 5 | 82 | 222 | 50 | 174 | 2.03e-15 | 72.4 |
| Msa1169860 | AT5G04340.1 | 37.086 | 151 | 72 | 5 | 51 | 181 | 23 | 170 | 4.26e-15 | 72.4 |
| Msa1169860 | AT1G49900.1 | 41.284 | 109 | 49 | 5 | 88 | 181 | 159 | 267 | 1.01e-13 | 70.5 |
| Msa1169860 | AT1G49900.1 | 42.254 | 71 | 41 | 0 | 111 | 181 | 750 | 820 | 2.63e-12 | 66.6 |
| Msa1169860 | AT1G27730.1 | 39.815 | 108 | 53 | 3 | 82 | 181 | 55 | 158 | 1.33e-13 | 68.2 |
| Msa1169860 | AT5G67450.1 | 34.437 | 151 | 74 | 4 | 56 | 181 | 36 | 186 | 4.16e-13 | 67.0 |
| Msa1169860 | AT5G56200.1 | 40.000 | 100 | 39 | 2 | 113 | 191 | 344 | 443 | 1.16e-12 | 67.4 |
| Msa1169860 | AT5G56200.1 | 39.394 | 99 | 47 | 3 | 39 | 133 | 344 | 433 | 1.61e-11 | 63.9 |
| Msa1169860 | AT1G02040.1 | 33.129 | 163 | 72 | 3 | 56 | 181 | 85 | 247 | 1.42e-12 | 66.6 |
Find 37 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATATCTCTTTGTCTCTTCA+TGG | 0.186634 | 7_4:-62962074 | None:intergenic |
| CAGCTAGTTTCATTCTCTTA+TGG | 0.261088 | 7_4:-62958075 | None:intergenic |
| TTCTCTTATGGCTAGCTCTA+TGG | 0.296077 | 7_4:-62958063 | None:intergenic |
| TATTGTTATGTTGTTGATGT+TGG | 0.324104 | 7_4:-62962150 | None:intergenic |
| AATGATTTGAAGTTGTTGTT+TGG | 0.347319 | 7_4:+62962538 | Msa1169860:CDS |
| ATTGTTATGTTGTTGATGTT+GGG | 0.351718 | 7_4:-62962149 | None:intergenic |
| CTATTCAATCTCTTTAAAAC+TGG | 0.356656 | 7_4:-62962472 | None:intergenic |
| CAACAGAAAAGCTATGAAAA+TGG | 0.359512 | 7_4:+62957983 | Msa1169860:CDS |
| AGGATTAGAAAGCATAGATT+TGG | 0.368671 | 7_4:+62962099 | Msa1169860:CDS |
| CATAAAAGATCAAAGCTAGA+AGG | 0.385523 | 7_4:+62962271 | Msa1169860:CDS |
| TTCATAACAACTTGCTCCAT+TGG | 0.405809 | 7_4:-62962445 | None:intergenic |
| AATTCTACATCTTTGAGCTT+AGG | 0.417627 | 7_4:+62962310 | Msa1169860:CDS |
| GAAGTTGTTGTTTGGAAAGA+TGG | 0.423340 | 7_4:+62962546 | Msa1169860:CDS |
| CAAACTAAAACATCAAGATT+AGG | 0.441068 | 7_4:-62962571 | None:intergenic |
| GGACTTGAACTTGACACCAT+TGG | 0.443698 | 7_4:+62962513 | Msa1169860:CDS |
| AAGAGACAAAGAGATATAGA+AGG | 0.447668 | 7_4:+62962079 | Msa1169860:CDS |
| AAGAGACAAAGGAGCAATGA+AGG | 0.461364 | 7_4:+62957911 | Msa1169860:CDS |
| TGCATGAATGTTCCATTTGT+GGG | 0.475350 | 7_4:+62962347 | Msa1169860:CDS |
| TTGTTATGTTGTTGATGTTG+GGG | 0.502259 | 7_4:-62962148 | None:intergenic |
| ATGCATGAATGTTCCATTTG+TGG | 0.513081 | 7_4:+62962346 | Msa1169860:CDS |
| TAAAGAGATTGAATAGTGCA+AGG | 0.521881 | 7_4:+62962479 | Msa1169860:CDS |
| CAACGAAGAGGTTTCTCCAA+TGG | 0.523977 | 7_4:+62962429 | Msa1169860:CDS |
| GGCTAGCTCTATGGCCACCA+AGG | 0.538489 | 7_4:-62958054 | None:intergenic |
| ATAAAAGATCAAAGCTAGAA+GGG | 0.549441 | 7_4:+62962272 | Msa1169860:CDS |
| AAAGAGATTGAATAGTGCAA+GGG | 0.553931 | 7_4:+62962480 | Msa1169860:CDS |
| GTGGCCACCTAGTGCTTGAA+AGG | 0.555432 | 7_4:-62962239 | None:intergenic |
| TAGTGCAAGGGTAATGTGCT+TGG | 0.582174 | 7_4:+62962492 | Msa1169860:CDS |
| TTCTCATCCTTTCAAGCACT+AGG | 0.596938 | 7_4:+62962232 | Msa1169860:CDS |
| TAAAGCTATTATCAACGAAG+AGG | 0.599520 | 7_4:+62962417 | Msa1169860:CDS |
| GCTAGCTCTATGGCCACCAA+GGG | 0.600232 | 7_4:-62958053 | None:intergenic |
| AACTTCAAATCATTCTCCAA+TGG | 0.606116 | 7_4:-62962529 | None:intergenic |
| CATTGGGTGGACACATGAGA+AGG | 0.615753 | 7_4:+62962392 | Msa1169860:CDS |
| TCATTGGGACAAGCATTGGG+TGG | 0.622140 | 7_4:+62962379 | Msa1169860:CDS |
| TGATGGCAATGAAGAGACAA+AGG | 0.625383 | 7_4:+62957900 | None:intergenic |
| TAAAAGATCAAAGCTAGAAG+GGG | 0.632211 | 7_4:+62962273 | Msa1169860:CDS |
| AAGAGAATGAAACTAGCTGA+AGG | 0.634408 | 7_4:+62958079 | Msa1169860:CDS |
| TCATCCTTTCAAGCACTAGG+TGG | 0.660073 | 7_4:+62962235 | Msa1169860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTAGTCAATAAATAATA+TGG | - | chr7_4:62958597-62958616 | None:intergenic | 10.0% |
| !! | AAAATCAAAAATAGAAAATA+TGG | + | chr7_4:62959485-62959504 | Msa1169860:intron | 10.0% |
| !!! | TAATTTTGTTTTGAAATTTT+GGG | - | chr7_4:62959753-62959772 | None:intergenic | 10.0% |
| !!! | TTAATTTTGTTTTGAAATTT+TGG | - | chr7_4:62959754-62959773 | None:intergenic | 10.0% |
| !! | TAAATGAATAAATTAAACAA+TGG | + | chr7_4:62960346-62960365 | Msa1169860:intron | 10.0% |
| !!! | ATTTTATTCAACTATATTTA+TGG | - | chr7_4:62961844-62961863 | None:intergenic | 10.0% |
| !!! | ATATTCATTCATTTTGTAAT+TGG | + | chr7_4:62958525-62958544 | Msa1169860:intron | 15.0% |
| !! | TTAAAAAGAATGAAATTTAC+AGG | - | chr7_4:62958645-62958664 | None:intergenic | 15.0% |
| !! | ATTAATCACATTCAAAATTA+TGG | + | chr7_4:62958840-62958859 | Msa1169860:intron | 15.0% |
| !!! | TTACATAAAAGTATTTTTTG+TGG | + | chr7_4:62959294-62959313 | Msa1169860:intron | 15.0% |
| !!! | TACATAAAAGTATTTTTTGT+GGG | + | chr7_4:62959295-62959314 | Msa1169860:intron | 15.0% |
| !!! | TTTGAGAATATTATCAATTT+TGG | - | chr7_4:62959462-62959481 | None:intergenic | 15.0% |
| !!! | CATTAAACAACTAAATTTTT+TGG | + | chr7_4:62959774-62959793 | Msa1169860:intron | 15.0% |
| !! | ATTTCGTAATAAATTAAGTT+CGG | + | chr7_4:62959922-62959941 | Msa1169860:intron | 15.0% |
| !! | TCACATTTATATATCAAAAT+TGG | + | chr7_4:62960263-62960282 | Msa1169860:intron | 15.0% |
| !! | ATCAAAGAAAAAAAAAAGAA+AGG | + | chr7_4:62961782-62961801 | Msa1169860:intron | 15.0% |
| !!! | TTTTGCAATAATTTGATTGA+TGG | - | chr7_4:62958257-62958276 | None:intergenic | 20.0% |
| !! | GTCTTAAAAGATTAAGAAAA+AGG | - | chr7_4:62958778-62958797 | None:intergenic | 20.0% |
| !! | TAAGACATTTAAACTAAAGT+TGG | + | chr7_4:62958792-62958811 | Msa1169860:intron | 20.0% |
| !!! | TGGAATCAATTATAACATTT+TGG | - | chr7_4:62959387-62959406 | None:intergenic | 20.0% |
| !!! | AATCATATTTAAGGTGTATT+TGG | + | chr7_4:62959692-62959711 | Msa1169860:intron | 20.0% |
| !!! | AACAACTAAATTTTTTGGAA+TGG | + | chr7_4:62959779-62959798 | Msa1169860:intron | 20.0% |
| !!! | GTCAAAAAATAATTTTGAGA+TGG | + | chr7_4:62959851-62959870 | Msa1169860:intron | 20.0% |
| !! | ATTACGAAATATTGTAACAA+TGG | - | chr7_4:62959912-62959931 | None:intergenic | 20.0% |
| !! | ATCATAGAATAAAAGATATG+CGG | - | chr7_4:62959970-62959989 | None:intergenic | 20.0% |
| !! | CAACTTATGTTTAAATACTA+CGG | + | chr7_4:62960014-62960033 | Msa1169860:intron | 20.0% |
| !!! | AATGTGAAAATTGTTGATTA+TGG | - | chr7_4:62960250-62960269 | None:intergenic | 20.0% |
| !! | GATTTCAATGTTAGAATTTA+CGG | + | chr7_4:62960386-62960405 | Msa1169860:intron | 20.0% |
| !! | ATGAATAATTAGTGAATCTA+TGG | - | chr7_4:62961189-62961208 | None:intergenic | 20.0% |
| !!! | TGTTTATGTTTATGTTGTTT+GGG | - | chr7_4:62961320-62961339 | None:intergenic | 20.0% |
| !! | TTGTTTATGTTTATGTTGTT+TGG | - | chr7_4:62961321-62961340 | None:intergenic | 20.0% |
| !! | TGATGTATTGTAGTTTAATA+CGG | - | chr7_4:62961451-62961470 | None:intergenic | 20.0% |
| !! | TTATTCAACTATATTTATGG+AGG | - | chr7_4:62961841-62961860 | None:intergenic | 20.0% |
| !! | TTATATTTATAAGCCATAAC+TGG | - | chr7_4:62961890-62961909 | None:intergenic | 20.0% |
| !! | ATTAATTGGTGAATAACATT+TGG | - | chr7_4:62961923-62961942 | None:intergenic | 20.0% |
| ! | ATTGAATAGTAAGAGGATTA+TGG | + | chr7_4:62958294-62958313 | Msa1169860:intron | 25.0% |
| ! | TTGAATAGTAAGAGGATTAT+GGG | + | chr7_4:62958295-62958314 | Msa1169860:intron | 25.0% |
| ! | ATTGAAGTAAATTAACCAGT+TGG | - | chr7_4:62958688-62958707 | None:intergenic | 25.0% |
| ! | GCTAATGTATCAATATTACA+AGG | - | chr7_4:62958756-62958775 | None:intergenic | 25.0% |
| ! | AATCATGTGTCATATGTATA+GGG | - | chr7_4:62958823-62958842 | None:intergenic | 25.0% |
| ! | TAATCATGTGTCATATGTAT+AGG | - | chr7_4:62958824-62958843 | None:intergenic | 25.0% |
| ! | GTTAATCACACTAAAAAATG+TGG | - | chr7_4:62958991-62959010 | None:intergenic | 25.0% |
| ! | AATGGAAAAATAGAGACAAA+AGG | - | chr7_4:62959075-62959094 | None:intergenic | 25.0% |
| ! | ACAATCAAAACTTTACGTTA+GGG | - | chr7_4:62959181-62959200 | None:intergenic | 25.0% |
| ! | AACAATCAAAACTTTACGTT+AGG | - | chr7_4:62959182-62959201 | None:intergenic | 25.0% |
| !!! | CGTAAAGTTTTGATTGTTTA+AGG | + | chr7_4:62959184-62959203 | Msa1169860:intron | 25.0% |
| !!! | GTATCGTATGTTTGATTTTA+TGG | + | chr7_4:62959225-62959244 | Msa1169860:intron | 25.0% |
| !! | TTGTAGCTTTTACATTTAAG+TGG | - | chr7_4:62959407-62959426 | None:intergenic | 25.0% |
| !!! | AAAATTATTTTTTGACCACC+TGG | - | chr7_4:62959847-62959866 | None:intergenic | 25.0% |
| ! | TATGTGACAATGTTATAAGA+TGG | - | chr7_4:62960058-62960077 | None:intergenic | 25.0% |
| !!! | TTTTTGTTTCAATAGTCTAG+TGG | - | chr7_4:62960193-62960212 | None:intergenic | 25.0% |
| ! | TTGTCACATATCAATAACTA+CGG | + | chr7_4:62960223-62960242 | Msa1169860:intron | 25.0% |
| ! | ATGTGAAAAATGTTCTCTAT+GGG | - | chr7_4:62960476-62960495 | None:intergenic | 25.0% |
| ! | AATGTGAAAAATGTTCTCTA+TGG | - | chr7_4:62960477-62960496 | None:intergenic | 25.0% |
| ! | TTCACATTTAGATACAAAAG+TGG | + | chr7_4:62960489-62960508 | Msa1169860:intron | 25.0% |
| ! | TGTGTACATCATGAAAATAT+TGG | - | chr7_4:62960594-62960613 | None:intergenic | 25.0% |
| ! | CATTATACTCTTAAATGCAT+TGG | + | chr7_4:62960859-62960878 | Msa1169860:intron | 25.0% |
| ! | GAATTAATAAAGCTTCAAGA+TGG | - | chr7_4:62961073-62961092 | None:intergenic | 25.0% |
| ! | TAGTACAACATTTAAACAAG+TGG | + | chr7_4:62961158-62961177 | Msa1169860:intron | 25.0% |
| !! | GTTTAACTATTGTCTCTTTT+GGG | - | chr7_4:62961426-62961445 | None:intergenic | 25.0% |
| !! | TGTTTAACTATTGTCTCTTT+TGG | - | chr7_4:62961427-62961446 | None:intergenic | 25.0% |
| ! | GAAAAAAAAAAGAAAGGATG+AGG | + | chr7_4:62961788-62961807 | Msa1169860:intron | 25.0% |
| ! | GTTTATGAATGAAATGTGAT+GGG | - | chr7_4:62961977-62961996 | None:intergenic | 25.0% |
| ! | AGTTTATGAATGAAATGTGA+TGG | - | chr7_4:62961978-62961997 | None:intergenic | 25.0% |
| ! | ATTGTTATGTTGTTGATGTT+GGG | - | chr7_4:62962152-62962171 | None:intergenic | 25.0% |
| ! | TATTGTTATGTTGTTGATGT+TGG | - | chr7_4:62962153-62962172 | None:intergenic | 25.0% |
| ! | ATAAAAGATCAAAGCTAGAA+GGG | + | chr7_4:62962272-62962291 | Msa1169860:CDS | 25.0% |
| !!! | CTATTCAATCTCTTTAAAAC+TGG | - | chr7_4:62962475-62962494 | None:intergenic | 25.0% |
| !! | AATGATTTGAAGTTGTTGTT+TGG | + | chr7_4:62962538-62962557 | Msa1169860:CDS | 25.0% |
| ! | CAAACTAAAACATCAAGATT+AGG | - | chr7_4:62962574-62962593 | None:intergenic | 25.0% |
| ! | TTTTCATAGCTTTTCTGTTG+TGG | - | chr7_4:62957983-62958002 | None:intergenic | 30.0% |
| CAACAGAAAAGCTATGAAAA+TGG | + | chr7_4:62957983-62958002 | Msa1169860:CDS | 30.0% | |
| ! | ATAGAACACTCATGCATTTT+TGG | - | chr7_4:62958151-62958170 | None:intergenic | 30.0% |
| ATAGAGCTGTCATAAATGAA+GGG | + | chr7_4:62958224-62958243 | Msa1169860:intron | 30.0% | |
| CTATTCAATCTCTTCAAAAC+TGG | - | chr7_4:62958283-62958302 | None:intergenic | 30.0% | |
| TGAAGAGATTGAATAGTAAG+AGG | + | chr7_4:62958287-62958306 | Msa1169860:intron | 30.0% | |
| TGAATAGTAAGAGGATTATG+GGG | + | chr7_4:62958296-62958315 | Msa1169860:intron | 30.0% | |
| CAAAACAAAGAAAGTGGAAT+TGG | - | chr7_4:62958388-62958407 | None:intergenic | 30.0% | |
| GTTGATCAAAACAAAGAAAG+TGG | - | chr7_4:62958394-62958413 | None:intergenic | 30.0% | |
| !! | TGGTGCTGAAATATCAATTT+TGG | - | chr7_4:62958577-62958596 | None:intergenic | 30.0% |
| GGTTAATTCACTTGAATGAA+TGG | + | chr7_4:62958861-62958880 | Msa1169860:intron | 30.0% | |
| ! | TTCATTTCAGGTCAAAATTG+TGG | - | chr7_4:62958944-62958963 | None:intergenic | 30.0% |
| !!! | ATTTTTTTCTGCACTACACA+TGG | - | chr7_4:62959013-62959032 | None:intergenic | 30.0% |
| ATGTGTAGTGCAGAAAAAAA+TGG | + | chr7_4:62959012-62959031 | Msa1169860:intron | 30.0% | |
| TGTGTAGTGCAGAAAAAAAT+GGG | + | chr7_4:62959013-62959032 | Msa1169860:intron | 30.0% | |
| GGGTGTCTAAATATTATTGT+TGG | + | chr7_4:62959033-62959052 | Msa1169860:intron | 30.0% | |
| AGAAAAGTTAGAACTAGCAA+TGG | - | chr7_4:62959093-62959112 | None:intergenic | 30.0% | |
| !!! | TTTTAGAACTAGTTCTAAGC+TGG | - | chr7_4:62959439-62959458 | None:intergenic | 30.0% |
| TGAGTTTGTAAGGTTAAACA+TGG | - | chr7_4:62959516-62959535 | None:intergenic | 30.0% | |
| TGATCAAACTTGAGTTTGTA+AGG | - | chr7_4:62959526-62959545 | None:intergenic | 30.0% | |
| AGCACTAAGAAATCTCTTAA+CGG | + | chr7_4:62959570-62959589 | Msa1169860:intron | 30.0% | |
| AAGGTGTATTTGGAAGAAAA+AGG | + | chr7_4:62959702-62959721 | Msa1169860:intron | 30.0% | |
| !! | TTTTAAAAGTGTGGAGAAGT+GGG | - | chr7_4:62960157-62960176 | None:intergenic | 30.0% |
| !! | ATCACACACTTTTAAAAGTG+TGG | - | chr7_4:62960166-62960185 | None:intergenic | 30.0% |
| TGTCACATATCAATAACTAC+GGG | + | chr7_4:62960224-62960243 | Msa1169860:intron | 30.0% | |
| !! | TTCCACTTTTATCATCCTAA+CGG | + | chr7_4:62960286-62960305 | Msa1169860:intron | 30.0% |
| ACGGTGTACAAATTATGTTA+AGG | + | chr7_4:62960405-62960424 | Msa1169860:intron | 30.0% | |
| AATTAAGCAACTAGTAAAGG+AGG | - | chr7_4:62960750-62960769 | None:intergenic | 30.0% | |
| CCAAATTAAGCAACTAGTAA+AGG | - | chr7_4:62960753-62960772 | None:intergenic | 30.0% | |
| CCTTTACTAGTTGCTTAATT+TGG | + | chr7_4:62960750-62960769 | Msa1169860:intron | 30.0% | |
| TTTATGTTTGTGTGTGTGAA+TGG | + | chr7_4:62960825-62960844 | Msa1169860:intron | 30.0% | |
| GGTTTAATGCATGAAGTATA+CGG | + | chr7_4:62960926-62960945 | Msa1169860:intron | 30.0% | |
| GTTTAATGCATGAAGTATAC+GGG | + | chr7_4:62960927-62960946 | Msa1169860:intron | 30.0% | |
| CATTTGATCATCAGAATATG+GGG | - | chr7_4:62961000-62961019 | None:intergenic | 30.0% | |
| GCATTTGATCATCAGAATAT+GGG | - | chr7_4:62961001-62961020 | None:intergenic | 30.0% | |
| TGCATTTGATCATCAGAATA+TGG | - | chr7_4:62961002-62961021 | None:intergenic | 30.0% | |
| ! | TGGGTTGACATATACTAATT+TGG | - | chr7_4:62961044-62961063 | None:intergenic | 30.0% |
| ! | GGGTATTTCATATAGTGTTT+TGG | - | chr7_4:62961406-62961425 | None:intergenic | 30.0% |
| GTTAAACTTTCAACGTCTAA+CGG | - | chr7_4:62961570-62961589 | None:intergenic | 30.0% | |
| CCTCATCTATTCTATATTGT+AGG | - | chr7_4:62961757-62961776 | None:intergenic | 30.0% | |
| CCTACAATATAGAATAGATG+AGG | + | chr7_4:62961754-62961773 | Msa1169860:intron | 30.0% | |
| TGAATAACATTTGGATATGG+AGG | - | chr7_4:62961914-62961933 | None:intergenic | 30.0% | |
| TGGTGAATAACATTTGGATA+TGG | - | chr7_4:62961917-62961936 | None:intergenic | 30.0% | |
| TATATCTCTTTGTCTCTTCA+TGG | - | chr7_4:62962077-62962096 | None:intergenic | 30.0% | |
| AAGAGACAAAGAGATATAGA+AGG | + | chr7_4:62962079-62962098 | Msa1169860:CDS | 30.0% | |
| ! | AGGATTAGAAAGCATAGATT+TGG | + | chr7_4:62962099-62962118 | Msa1169860:CDS | 30.0% |
| TTGTTATGTTGTTGATGTTG+GGG | - | chr7_4:62962151-62962170 | None:intergenic | 30.0% | |
| !!! | CTTCTAGCTTTGATCTTTTA+TGG | - | chr7_4:62962273-62962292 | None:intergenic | 30.0% |
| CATAAAAGATCAAAGCTAGA+AGG | + | chr7_4:62962271-62962290 | Msa1169860:CDS | 30.0% | |
| TAAAAGATCAAAGCTAGAAG+GGG | + | chr7_4:62962273-62962292 | Msa1169860:CDS | 30.0% | |
| AATTCTACATCTTTGAGCTT+AGG | + | chr7_4:62962310-62962329 | Msa1169860:CDS | 30.0% | |
| ! | ATGGAACATTCATGCATTTT+AGG | - | chr7_4:62962343-62962362 | None:intergenic | 30.0% |
| ! | TGAAAATTTTTGCCCACAAA+TGG | - | chr7_4:62962362-62962381 | None:intergenic | 30.0% |
| ! | TTGTGGGCAAAAATTTTCAT+TGG | + | chr7_4:62962363-62962382 | Msa1169860:CDS | 30.0% |
| ! | TGTGGGCAAAAATTTTCATT+GGG | + | chr7_4:62962364-62962383 | Msa1169860:CDS | 30.0% |
| TAAAGCTATTATCAACGAAG+AGG | + | chr7_4:62962417-62962436 | Msa1169860:CDS | 30.0% | |
| TAAAGAGATTGAATAGTGCA+AGG | + | chr7_4:62962479-62962498 | Msa1169860:CDS | 30.0% | |
| AAAGAGATTGAATAGTGCAA+GGG | + | chr7_4:62962480-62962499 | Msa1169860:CDS | 30.0% | |
| AACTTCAAATCATTCTCCAA+TGG | - | chr7_4:62962532-62962551 | None:intergenic | 30.0% | |
| ! | CAGCTAGTTTCATTCTCTTA+TGG | - | chr7_4:62958078-62958097 | None:intergenic | 35.0% |
| AAGAGAATGAAACTAGCTGA+AGG | + | chr7_4:62958079-62958098 | Msa1169860:CDS | 35.0% | |
| AAGCAAAATCTCTCAGTTTG+TGG | + | chr7_4:62958119-62958138 | Msa1169860:intron | 35.0% | |
| ATGCATGAGTGTTCTATTTG+TGG | + | chr7_4:62958154-62958173 | Msa1169860:intron | 35.0% | |
| TGAGTGTTCTATTTGTGGTA+TGG | + | chr7_4:62958159-62958178 | Msa1169860:intron | 35.0% | |
| GAGTGTTCTATTTGTGGTAT+GGG | + | chr7_4:62958160-62958179 | Msa1169860:intron | 35.0% | |
| ! | CAGCTCTATGTTTTCTCATA+TGG | - | chr7_4:62958213-62958232 | None:intergenic | 35.0% |
| CATAGAGCTGTCATAAATGA+AGG | + | chr7_4:62958223-62958242 | Msa1169860:intron | 35.0% | |
| TAGAGCTGTCATAAATGAAG+GGG | + | chr7_4:62958225-62958244 | Msa1169860:intron | 35.0% | |
| ATCAAGTCATCATTCTCTAG+AGG | - | chr7_4:62958340-62958359 | None:intergenic | 35.0% | |
| GAGAATGATGACTTGATGTT+TGG | + | chr7_4:62958343-62958362 | Msa1169860:intron | 35.0% | |
| AAAGAAAGTGGAATTGGTGT+TGG | - | chr7_4:62958382-62958401 | None:intergenic | 35.0% | |
| ! | AGAGATGGTTAGTTCATTTC+AGG | - | chr7_4:62958956-62958975 | None:intergenic | 35.0% |
| TGGTTAATTTCGTTGAGAGA+TGG | - | chr7_4:62958971-62958990 | None:intergenic | 35.0% | |
| ! | TTAGTGCTTGTTTGGTTTCA+CGG | - | chr7_4:62959558-62959577 | None:intergenic | 35.0% |
| GAGATTTCTTAGTGCTTGTT+TGG | - | chr7_4:62959566-62959585 | None:intergenic | 35.0% | |
| GCACTAAGAAATCTCTTAAC+GGG | + | chr7_4:62959571-62959590 | Msa1169860:intron | 35.0% | |
| ! | TTTAAAAGTGTGGAGAAGTG+GGG | - | chr7_4:62960156-62960175 | None:intergenic | 35.0% |
| !! | CTTTTAAAAGTGTGGAGAAG+TGG | - | chr7_4:62960158-62960177 | None:intergenic | 35.0% |
| TTCCGTTAGGATGATAAAAG+TGG | - | chr7_4:62960291-62960310 | None:intergenic | 35.0% | |
| ! | TCTGAAGAATTGATTCCGTT+AGG | - | chr7_4:62960304-62960323 | None:intergenic | 35.0% |
| ! | AGTGGTTCTACTTCTATCAT+CGG | + | chr7_4:62960507-62960526 | Msa1169860:intron | 35.0% |
| TGTGCTTAATTGAACGTGTT+AGG | + | chr7_4:62960693-62960712 | Msa1169860:intron | 35.0% | |
| !!! | ATTTGGCTTTTGACTCATGA+TGG | + | chr7_4:62960767-62960786 | Msa1169860:intron | 35.0% |
| ATGACTTGAGCAACATTAGT+AGG | + | chr7_4:62960951-62960970 | Msa1169860:intron | 35.0% | |
| ACTACAATACATCAGCAAAG+AGG | + | chr7_4:62961457-62961476 | Msa1169860:intron | 35.0% | |
| !! | CATTGACTTTGTTCCAGTTA+TGG | + | chr7_4:62961874-62961893 | Msa1169860:intron | 35.0% |
| GAGAAGGAGTTGTGATTAAT+TGG | - | chr7_4:62961937-62961956 | None:intergenic | 35.0% | |
| GTGTTACAATGAATTGGAGA+AGG | - | chr7_4:62961953-62961972 | None:intergenic | 35.0% | |
| ATGGGTGTGTTACAATGAAT+TGG | - | chr7_4:62961959-62961978 | None:intergenic | 35.0% | |
| !!! | GGCGCAAAACTTTTTTGATT+TGG | - | chr7_4:62962178-62962197 | None:intergenic | 35.0% |
| ATGCATGAATGTTCCATTTG+TGG | + | chr7_4:62962346-62962365 | Msa1169860:CDS | 35.0% | |
| TGCATGAATGTTCCATTTGT+GGG | + | chr7_4:62962347-62962366 | Msa1169860:CDS | 35.0% | |
| ! | ATTTTCATTGGGACAAGCAT+TGG | + | chr7_4:62962375-62962394 | Msa1169860:CDS | 35.0% |
| ! | TTTTCATTGGGACAAGCATT+GGG | + | chr7_4:62962376-62962395 | Msa1169860:CDS | 35.0% |
| ! | TTCATAACAACTTGCTCCAT+TGG | - | chr7_4:62962448-62962467 | None:intergenic | 35.0% |
| !! | GAAGTTGTTGTTTGGAAAGA+TGG | + | chr7_4:62962546-62962565 | Msa1169860:CDS | 35.0% |
| AAGAGACAAAGGAGCAATGA+AGG | + | chr7_4:62957911-62957930 | Msa1169860:CDS | 40.0% | |
| !! | TTCTCATCTTTTCAAGCCCT+TGG | + | chr7_4:62958037-62958056 | Msa1169860:CDS | 40.0% |
| !! | TTCTCTTATGGCTAGCTCTA+TGG | - | chr7_4:62958066-62958085 | None:intergenic | 40.0% |
| TTGTGGTATGGGATTCTCTT+TGG | + | chr7_4:62958171-62958190 | Msa1169860:intron | 40.0% | |
| TGTGGTATGGGATTCTCTTT+GGG | + | chr7_4:62958172-62958191 | Msa1169860:intron | 40.0% | |
| TTCTCTTTGGGTCAAGCATT+AGG | + | chr7_4:62958184-62958203 | Msa1169860:intron | 40.0% | |
| TAGTAAGAGGATTATGGGGT+TGG | + | chr7_4:62958300-62958319 | Msa1169860:intron | 40.0% | |
| TCTTACACAGATCTTGTTGC+AGG | - | chr7_4:62958719-62958738 | None:intergenic | 40.0% | |
| TACCAACTGAGCTACACTTA+CGG | - | chr7_4:62960086-62960105 | None:intergenic | 40.0% | |
| ! | GTATGCATTTTCACACGTAG+TGG | - | chr7_4:62960900-62960919 | None:intergenic | 40.0% |
| TGTGAAAATGCATACCTAGC+TGG | + | chr7_4:62960905-62960924 | Msa1169860:intron | 40.0% | |
| CTTCATGCATTAAACCAGCT+AGG | - | chr7_4:62960922-62960941 | None:intergenic | 40.0% | |
| !! | TATAGTGTTTTGGACACGTG+AGG | - | chr7_4:62961396-62961415 | None:intergenic | 40.0% |
| TCATTCCAGTGAGTGACATT+AGG | + | chr7_4:62961489-62961508 | Msa1169860:intron | 40.0% | |
| ! | ATGTTTCTGACTTCGCTTTG+AGG | - | chr7_4:62961525-62961544 | None:intergenic | 40.0% |
| AAACTTTCAACGTCTAACGG+CGG | - | chr7_4:62961567-62961586 | None:intergenic | 40.0% | |
| ! | TCAAAAAAGTTTTGCGCCAG+TGG | + | chr7_4:62962180-62962199 | Msa1169860:CDS | 40.0% |
| ! | GTTTTGCACTCATATTCCAC+TGG | - | chr7_4:62962199-62962218 | None:intergenic | 40.0% |
| TTCTCATCCTTTCAAGCACT+AGG | + | chr7_4:62962232-62962251 | Msa1169860:CDS | 40.0% | |
| !!! | ATCTTTTATGGCTAGCTCTG+TGG | - | chr7_4:62962261-62962280 | None:intergenic | 40.0% |
| !! | TCATCTTTTCAAGCCCTTGG+TGG | + | chr7_4:62958040-62958059 | Msa1169860:CDS | 45.0% |
| TCTTTGGGTCAAGCATTAGG+AGG | + | chr7_4:62958187-62958206 | Msa1169860:intron | 45.0% | |
| !! | GAAAGTGGAATTGGTGTTGG+TGG | - | chr7_4:62958379-62958398 | None:intergenic | 45.0% |
| ACCAACTGAGCTACACTTAC+GGG | - | chr7_4:62960085-62960104 | None:intergenic | 45.0% | |
| TACCAGGGACAATGTTTGCA+GGG | + | chr7_4:62960108-62960127 | Msa1169860:intron | 45.0% | |
| TGCATTGCGAGCTATCAAGT+TGG | - | chr7_4:62961274-62961293 | None:intergenic | 45.0% | |
| ACAAAACATGACATCCCACG+CGG | + | chr7_4:62961337-62961356 | Msa1169860:intron | 45.0% | |
| TGAATCTAGATGAACCGCGT+GGG | - | chr7_4:62961354-62961373 | None:intergenic | 45.0% | |
| ATGAATCTAGATGAACCGCG+TGG | - | chr7_4:62961355-62961374 | None:intergenic | 45.0% | |
| CTAGTCCTAATGTCACTCAC+TGG | - | chr7_4:62961497-62961516 | None:intergenic | 45.0% | |
| TCATCCTTTCAAGCACTAGG+TGG | + | chr7_4:62962235-62962254 | Msa1169860:CDS | 45.0% | |
| CAACGAAGAGGTTTCTCCAA+TGG | + | chr7_4:62962429-62962448 | Msa1169860:CDS | 45.0% | |
| TAGTGCAAGGGTAATGTGCT+TGG | + | chr7_4:62962492-62962511 | Msa1169860:CDS | 45.0% | |
| GGACTTGAACTTGACACCAT+TGG | + | chr7_4:62962513-62962532 | Msa1169860:CDS | 45.0% | |
| !! | AATAATATAAATCATATTTA+AGG | + | chr7_4:62959683-62959702 | Msa1169860:intron | 5.0% |
| !!! | ATTTATTCATTTAAAATAAA+AGG | - | chr7_4:62960339-62960358 | None:intergenic | 5.0% |
| !!! | TTTATTCATTTTAAAATAAA+AGG | - | chr7_4:62960563-62960582 | None:intergenic | 5.0% |
| GCTCATGTACAATGCACTCC+AGG | + | chr7_4:62959826-62959845 | Msa1169860:intron | 50.0% | |
| CATGTACAATGCACTCCAGG+TGG | + | chr7_4:62959829-62959848 | Msa1169860:intron | 50.0% | |
| TCCCGTAAGTGTAGCTCAGT+TGG | + | chr7_4:62960081-62960100 | Msa1169860:intron | 50.0% | |
| !! | TAGCTCAGTTGGTAGCTACC+AGG | + | chr7_4:62960092-62960111 | Msa1169860:intron | 50.0% |
| !! | AGCTCAGTTGGTAGCTACCA+GGG | + | chr7_4:62960093-62960112 | Msa1169860:intron | 50.0% |
| CTACCAGGGACAATGTTTGC+AGG | + | chr7_4:62960107-62960126 | Msa1169860:intron | 50.0% | |
| ACCAGGGACAATGTTTGCAG+GGG | + | chr7_4:62960109-62960128 | Msa1169860:intron | 50.0% | |
| !! | AGCTTCAAGATGGACTGCGT+GGG | - | chr7_4:62961063-62961082 | None:intergenic | 50.0% |
| !! | AAGCTTCAAGATGGACTGCG+TGG | - | chr7_4:62961064-62961083 | None:intergenic | 50.0% |
| !! | TCATTGGGACAAGCATTGGG+TGG | + | chr7_4:62962379-62962398 | Msa1169860:CDS | 50.0% |
| CATTGGGTGGACACATGAGA+AGG | + | chr7_4:62962392-62962411 | Msa1169860:CDS | 50.0% | |
| !! | GCTAGCTCTATGGCCACCAA+GGG | - | chr7_4:62958056-62958075 | None:intergenic | 55.0% |
| TGTGGAGAAGTGGGGAATCC+GGG | - | chr7_4:62960148-62960167 | None:intergenic | 55.0% | |
| GTGTGGAGAAGTGGGGAATC+CGG | - | chr7_4:62960149-62960168 | None:intergenic | 55.0% | |
| GATAGCTCGCAATGCACGAC+CGG | + | chr7_4:62961278-62961297 | Msa1169860:intron | 55.0% | |
| ! | CAATGCACGACCGGTTCAGT+TGG | + | chr7_4:62961287-62961306 | Msa1169860:intron | 55.0% |
| GGGTGAGCTACCAACTGAAC+CGG | - | chr7_4:62961300-62961319 | None:intergenic | 55.0% | |
| GTGGCCACCTAGTGCTTGAA+AGG | - | chr7_4:62962242-62962261 | None:intergenic | 55.0% | |
| !! | GGCTAGCTCTATGGCCACCA+AGG | - | chr7_4:62958057-62958076 | None:intergenic | 60.0% |
| CTCGATCGTGCTCGTCCAAC+TGG | + | chr7_4:62958670-62958689 | Msa1169860:intron | 60.0% | |
| GCCCCTGCAAACATTGTCCC+TGG | - | chr7_4:62960113-62960132 | None:intergenic | 60.0% | |
| GGGACAATGTTTGCAGGGGC+CGG | + | chr7_4:62960113-62960132 | Msa1169860:intron | 60.0% | |
| GGACAATGTTTGCAGGGGCC+GGG | + | chr7_4:62960114-62960133 | Msa1169860:intron | 60.0% | |
| GACAATGTTTGCAGGGGCCG+GGG | + | chr7_4:62960115-62960134 | Msa1169860:intron | 60.0% | |
| GTGGAGAAGTGGGGAATCCG+GGG | - | chr7_4:62960147-62960166 | None:intergenic | 60.0% | |
| GGAGGATACCCCACTAGCAG+CGG | - | chr7_4:62960732-62960751 | None:intergenic | 60.0% | |
| GGAATCCGGGGTTCGAACCC+CGG | - | chr7_4:62960135-62960154 | None:intergenic | 65.0% | |
| TCCCTGCAGACCGCTGCTAG+TGG | + | chr7_4:62960719-62960738 | Msa1169860:intron | 65.0% | |
| CCCACTAGCAGCGGTCTGCA+GGG | - | chr7_4:62960723-62960742 | None:intergenic | 65.0% | |
| CCCTGCAGACCGCTGCTAGT+GGG | + | chr7_4:62960720-62960739 | Msa1169860:intron | 65.0% | |
| CCTGCAGACCGCTGCTAGTG+GGG | + | chr7_4:62960721-62960740 | Msa1169860:intron | 65.0% | |
| CCCCACTAGCAGCGGTCTGC+AGG | - | chr7_4:62960724-62960743 | None:intergenic | 70.0% | |
| AGGGGCCGGGGTTCGAACCC+CGG | + | chr7_4:62960127-62960146 | Msa1169860:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 62957902 | 62962594 | 62957902 | ID=Msa1169860;Name=Msa1169860 |
| chr7_4 | mRNA | 62957902 | 62962594 | 62957902 | ID=Msa1169860-mRNA-1;Parent=Msa1169860;Name=Msa1169860-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0|0|1|0|0|2|0|239 |
| chr7_4 | exon | 62957902 | 62958100 | 62957902 | ID=Msa1169860-mRNA-1:exon:20068;Parent=Msa1169860-mRNA-1 |
| chr7_4 | exon | 62962074 | 62962594 | 62962074 | ID=Msa1169860-mRNA-1:exon:20069;Parent=Msa1169860-mRNA-1 |
| chr7_4 | CDS | 62957902 | 62958100 | 62957902 | ID=Msa1169860-mRNA-1:cds;Parent=Msa1169860-mRNA-1 |
| chr7_4 | CDS | 62962074 | 62962594 | 62962074 | ID=Msa1169860-mRNA-1:cds;Parent=Msa1169860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
