AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1184540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1184540 MtrunA17_Chr3g0087701 77.966 59 13 0 11 69 386 444 6.33e-29 108
Msa1184540 MtrunA17_Chr3g0086221 77.966 59 13 0 11 69 383 441 5.54e-27 102
Msa1184540 MtrunA17_Chr3g0086621 77.966 59 13 0 11 69 384 442 6.28e-27 102
Msa1184540 MtrunA17_Chr3g0085801 76.786 56 13 0 14 69 408 463 7.99e-27 102
Msa1184540 MtrunA17_Chr7g0221481 74.576 59 15 0 11 69 388 446 1.58e-26 101
Msa1184540 MtrunA17_Chr3g0086071 76.271 59 14 0 11 69 4 62 2.55e-26 100
Msa1184540 MtrunA17_Chr3g0086161 72.881 59 16 0 11 69 384 442 7.02e-25 96.7
Msa1184540 MtrunA17_Chr3g0087581 67.797 59 19 0 11 69 387 445 1.73e-24 95.5
Msa1184540 MtrunA17_Chr3g0085451 76.923 52 12 0 15 66 379 430 5.15e-24 94.0
Msa1184540 MtrunA17_Chr3g0085501 73.214 56 15 0 11 66 403 458 1.50e-23 92.8
Msa1184540 MtrunA17_Chr3g0086181 70.175 57 15 1 15 69 386 442 2.35e-23 92.0
Msa1184540 MtrunA17_Chr3g0085521 75.926 54 13 0 16 69 383 436 5.12e-23 91.3
Msa1184540 MtrunA17_Chr3g0085561 71.429 56 16 0 11 66 372 427 5.14e-23 91.3
Msa1184540 MtrunA17_Chr3g0085551 66.102 59 20 0 11 69 278 336 1.02e-22 90.5
Msa1184540 MtrunA17_Chr3g0086151 70.175 57 15 1 15 69 386 442 1.83e-22 89.7
Msa1184540 MtrunA17_Chr3g0085651 67.241 58 18 1 12 68 396 453 2.41e-22 89.4
Msa1184540 MtrunA17_Chr3g0085331 67.857 56 18 0 11 66 403 458 3.56e-22 89.0
Msa1184540 MtrunA17_Chr3g0086091 69.091 55 17 0 15 69 199 253 4.32e-22 88.6
Msa1184540 MtrunA17_Chr3g0082791 62.500 56 21 0 11 66 404 459 4.33e-22 88.6
Msa1184540 MtrunA17_Chr3g0086741 74.510 51 13 0 16 66 415 465 6.48e-22 88.2
Msa1184540 MtrunA17_Chr3g0085471 73.077 52 14 0 15 66 407 458 6.76e-22 88.2
Msa1184540 MtrunA17_Chr3g0084081 62.069 58 22 0 11 68 402 459 1.32e-21 87.0
Msa1184540 MtrunA17_Chr3g0087731 67.857 56 18 0 11 66 196 251 1.50e-21 87.0
Msa1184540 MtrunA17_Chr3g0085431 71.154 52 15 0 15 66 40 91 5.01e-21 85.5
Msa1184540 MtrunA17_Chr3g0087541 64.286 56 20 0 11 66 403 458 5.46e-21 85.5
Msa1184540 MtrunA17_Chr3g0084051 64.286 56 20 0 11 66 402 457 1.72e-20 84.0
Msa1184540 MtrunA17_Chr3g0084031 60.714 56 22 0 11 66 404 459 5.73e-19 79.7
Msa1184540 MtrunA17_Chr8g0352861 59.322 59 24 0 15 73 412 470 7.92e-19 79.3
Msa1184540 MtrunA17_Chr3g0085751 70.000 50 15 0 20 69 390 439 9.97e-19 79.0
Msa1184540 MtrunA17_Chr3g0085111 64.815 54 19 0 13 66 386 439 2.67e-18 77.8
Msa1184540 MtrunA17_Chr3g0085091 65.385 52 18 0 13 64 391 442 3.34e-18 77.4
Msa1184540 MtrunA17_Chr1g0169901 69.231 52 16 0 18 69 401 452 4.16e-18 77.4
Msa1184540 MtrunA17_Chr3g0085131 62.264 53 20 0 13 65 387 439 1.29e-17 75.9
Msa1184540 MtrunA17_Chr8g0352831 61.538 52 20 0 18 69 419 470 2.34e-17 75.1
Msa1184540 MtrunA17_Chr3g0089431 59.259 54 22 0 15 68 409 462 2.43e-17 75.1
Msa1184540 MtrunA17_Chr3g0091041 57.407 54 23 0 15 68 390 443 8.94e-17 73.6
Msa1184540 MtrunA17_Chr3g0085161 64.815 54 18 1 13 65 250 303 1.59e-16 72.8
Msa1184540 MtrunA17_Chr3g0090651 58.182 55 23 0 15 69 405 459 4.00e-16 71.6
Msa1184540 MtrunA17_Chr3g0091011 60.000 55 21 1 12 65 367 421 4.36e-16 71.6
Msa1184540 MtrunA17_Chr3g0090691 58.182 55 23 0 15 69 405 459 4.71e-16 71.2
Msa1184540 MtrunA17_Chr3g0089911 57.407 54 23 0 15 68 404 457 4.77e-16 71.2
Msa1184540 MtrunA17_Chr3g0091081 58.182 55 23 0 15 69 405 459 5.04e-16 71.2
Msa1184540 MtrunA17_Chr3g0091061 58.182 55 23 0 15 69 405 459 5.45e-16 71.2
Msa1184540 MtrunA17_Chr2g0309721 57.407 54 23 0 15 68 405 458 6.56e-16 70.9
Msa1184540 MtrunA17_Chr3g0082891 50.000 60 30 0 11 70 386 445 6.60e-16 70.9
Msa1184540 MtrunA17_Chr3g0089651 58.182 55 23 0 14 68 408 462 7.52e-16 70.9
Msa1184540 MtrunA17_Chr3g0089211 57.143 56 24 0 14 69 451 506 7.75e-16 70.9
Msa1184540 MtrunA17_Chr3g0085701 68.421 57 18 0 13 69 387 443 7.82e-16 70.9
Msa1184540 MtrunA17_Chr3g0089991 57.407 54 23 0 15 68 409 462 9.98e-16 70.5
Msa1184540 MtrunA17_Chr3g0082871 46.667 60 32 0 11 70 386 445 1.12e-15 70.5
Msa1184540 MtrunA17_Chr3g0092241 54.545 55 25 0 14 68 404 458 1.33e-15 70.1
Msa1184540 MtrunA17_Chr3g0082811 52.727 55 26 0 16 70 391 445 1.73e-15 69.7
Msa1184540 MtrunA17_Chr3g0082881 46.667 60 32 0 11 70 386 445 1.75e-15 69.7
Msa1184540 MtrunA17_Chr8g0346831 51.923 52 25 0 16 67 403 454 2.00e-15 69.7
Msa1184540 MtrunA17_Chr3g0089931 56.364 55 24 0 14 68 389 443 2.06e-15 69.3
Msa1184540 MtrunA17_Chr3g0089251 55.357 56 25 0 14 69 433 488 2.38e-15 69.3
Msa1184540 MtrunA17_Chr8g0338391 43.548 62 35 0 6 67 390 451 2.55e-15 69.3
Msa1184540 MtrunA17_Chr8g0338671 44.068 59 33 0 15 73 286 344 2.63e-15 69.3
Msa1184540 MtrunA17_Chr3g0089541 57.407 54 23 0 15 68 409 462 3.72e-15 68.9
Msa1184540 MtrunA17_Chr3g0092261 57.407 54 23 0 15 68 449 502 3.80e-15 68.9
Msa1184540 MtrunA17_Chr3g0089501 55.556 54 24 0 14 67 402 455 4.20e-15 68.6
Msa1184540 MtrunA17_Chr3g0089601 55.556 54 24 0 14 67 402 455 5.27e-15 68.6
Msa1184540 MtrunA17_Chr3g0084971 51.852 54 26 0 11 64 392 445 6.87e-15 68.2
Msa1184540 MtrunA17_Chr3g0089421 57.407 54 23 0 15 68 407 460 7.07e-15 68.2
Msa1184540 MtrunA17_Chr8g0338621 47.170 53 28 0 15 67 403 455 8.95e-15 67.8
Msa1184540 MtrunA17_Chr3g0089811 54.545 55 25 0 14 68 404 458 9.48e-15 67.8
Msa1184540 MtrunA17_Chr3g0091121 56.863 51 22 0 15 65 17 67 1.09e-14 67.4
Msa1184540 MtrunA17_Chr7g0218941 43.548 62 35 0 6 67 394 455 1.27e-14 67.4
Msa1184540 MtrunA17_Chr3g0089961 55.556 54 24 0 15 68 408 461 1.29e-14 67.4
Msa1184540 MtrunA17_Chr3g0089761 55.556 54 24 0 15 68 405 458 1.54e-14 67.0
Msa1184540 MtrunA17_Chr3g0082391 54.000 50 23 0 15 64 405 454 1.83e-14 67.0
Msa1184540 MtrunA17_Chr3g0085171 56.140 57 25 0 13 69 373 429 1.90e-14 66.6
Msa1184540 MtrunA17_Chr2g0299151 48.214 56 29 0 14 69 388 443 2.08e-14 66.6
Msa1184540 MtrunA17_Chr3g0078361 55.769 52 23 0 17 68 222 273 2.33e-14 66.6
Msa1184540 MtrunA17_Chr3g0089781 55.556 54 24 0 15 68 405 458 2.59e-14 66.2
Msa1184540 MtrunA17_Chr3g0090431 51.852 54 26 0 15 68 277 330 2.81e-14 66.2
Msa1184540 MtrunA17_Chr1g0189511 59.259 54 21 1 13 65 56 109 3.31e-14 65.5
Msa1184540 MtrunA17_Chr2g0299091 51.923 52 25 0 18 69 382 433 4.98e-14 65.5
Msa1184540 MtrunA17_Chr6g0471941 41.935 62 36 0 6 67 391 452 5.48e-14 65.5
Msa1184540 MtrunA17_Chr3g0082371 57.143 49 21 0 16 64 30 78 5.62e-14 65.5
Msa1184540 MtrunA17_Chr2g0282991 50.909 55 27 0 11 65 397 451 5.64e-14 65.5
Msa1184540 MtrunA17_Chr4g0020501 58.824 51 21 0 18 68 361 411 6.02e-14 65.5
Msa1184540 MtrunA17_Chr3g0089871 55.556 54 24 0 15 68 404 457 6.10e-14 65.5
Msa1184540 MtrunA17_Chr7g0248531 50.980 51 25 0 15 65 392 442 6.51e-14 65.5
Msa1184540 MtrunA17_Chr2g0299101 50.000 52 26 0 18 69 408 459 8.54e-14 65.1
Msa1184540 MtrunA17_Chr2g0299141 41.176 68 40 0 16 83 121 188 8.60e-14 64.7
Msa1184540 MtrunA17_Chr6g0475491 43.636 55 31 0 13 67 402 456 8.61e-14 65.1
Msa1184540 MtrunA17_Chr3g0082311 52.000 50 24 0 15 64 405 454 1.01e-13 64.7
Msa1184540 MtrunA17_Chr2g0299121 50.000 52 26 0 18 69 408 459 1.06e-13 64.7
Msa1184540 MtrunA17_Chr8g0348931 58.000 50 21 0 15 64 412 461 1.09e-13 64.7
Msa1184540 MtrunA17_Chr8g0338361 48.077 52 27 0 16 67 268 319 1.13e-13 64.7
Msa1184540 MtrunA17_Chr3g0082101 53.061 49 23 0 20 68 413 461 1.19e-13 64.7
Msa1184540 MtrunA17_Chr3g0083721 50.943 53 26 0 15 67 348 400 1.27e-13 64.3
Msa1184540 MtrunA17_Chr8g0337891 44.231 52 29 0 16 67 401 452 1.42e-13 64.3
Msa1184540 MtrunA17_Chr3g0090141 50.000 54 27 0 15 68 405 458 1.47e-13 64.3
Msa1184540 MtrunA17_Chr3g0090371 51.852 54 26 0 15 68 405 458 1.58e-13 64.3
Msa1184540 MtrunA17_Chr5g0446611 48.276 58 30 0 11 68 400 457 1.64e-13 64.3
Msa1184540 MtrunA17_Chr3g0087841 51.852 54 26 0 15 68 405 458 1.68e-13 64.3
Msa1184540 MtrunA17_Chr3g0083621 50.943 53 26 0 15 67 416 468 1.89e-13 63.9
Msa1184540 MtrunA17_Chr3g0089471 54.717 53 24 0 15 67 406 458 1.97e-13 63.9
Msa1184540 MtrunA17_Chr3g0090401 51.852 54 26 0 15 68 616 669 1.99e-13 63.9
Msa1184540 MtrunA17_Chr1g0164611 53.061 49 23 0 20 68 413 461 2.22e-13 63.9
Msa1184540 MtrunA17_Chr3g0091971 52.941 51 24 0 17 67 370 420 2.52e-13 63.5
Msa1184540 MtrunA17_Chr1g0164391 54.000 50 23 0 15 64 405 454 2.70e-13 63.5
Msa1184540 MtrunA17_Chr3g0084061 56.250 48 21 0 21 68 405 452 3.41e-13 63.2
Msa1184540 MtrunA17_Chr1g0164631 57.778 45 19 0 25 69 422 466 3.43e-13 63.2
Msa1184540 MtrunA17_Chr3g0089591 54.717 53 24 0 15 67 410 462 4.37e-13 62.8
Msa1184540 MtrunA17_Chr6g0484551 51.852 54 26 0 15 68 379 432 5.18e-13 62.8
Msa1184540 MtrunA17_Chr3g0084811 47.170 53 28 0 15 67 556 608 5.20e-13 62.8
Msa1184540 MtrunA17_Chr3g0082321 50.000 50 25 0 15 64 351 400 5.92e-13 62.4
Msa1184540 MtrunA17_Chr4g0025391 53.704 54 25 0 15 68 404 457 6.52e-13 62.4
Msa1184540 MtrunA17_Chr5g0414181 41.379 58 34 0 13 70 396 453 7.19e-13 62.4
Msa1184540 MtrunA17_Chr8g0355071 47.273 55 29 0 13 67 215 269 7.76e-13 62.0
Msa1184540 MtrunA17_Chr3g0080871 50.943 53 26 0 15 67 390 442 1.30e-12 61.6
Msa1184540 MtrunA17_Chr8g0355411 47.170 53 28 0 15 67 405 457 1.88e-12 61.2
Msa1184540 MtrunA17_Chr4g0010221 42.105 57 33 0 11 67 387 443 2.08e-12 60.8
Msa1184540 MtrunA17_Chr4g0051651 48.148 54 28 0 13 66 432 485 2.44e-12 60.8
Msa1184540 MtrunA17_Chr4g0009781 43.636 55 31 0 13 67 390 444 3.20e-12 60.5
Msa1184540 MtrunA17_Chr2g0316291 38.710 62 38 0 6 67 397 458 3.27e-12 60.5
Msa1184540 MtrunA17_Chr3g0083591 48.000 50 26 0 18 67 373 422 4.40e-12 60.1
Msa1184540 MtrunA17_Chr3g0082131 60.000 45 18 0 20 64 408 452 5.00e-12 60.1
Msa1184540 MtrunA17_Chr1g0164581 60.000 45 18 0 20 64 384 428 5.00e-12 60.1
Msa1184540 MtrunA17_Chr5g0414201 44.231 52 29 0 13 64 397 448 5.73e-12 59.7
Msa1184540 MtrunA17_Chr8g0352211 36.066 61 39 0 16 76 1399 1459 5.74e-12 59.7
Msa1184540 MtrunA17_Chr3g0082351 50.000 50 25 0 15 64 403 452 7.57e-12 59.3
Msa1184540 MtrunA17_Chr8g0338251 38.462 65 40 0 6 70 379 443 7.67e-12 59.3
Msa1184540 MtrunA17_Chr8g0338681 44.000 50 28 0 13 62 177 226 1.05e-11 58.5
Msa1184540 MtrunA17_Chr3g0083751 47.170 53 28 0 15 67 410 462 1.15e-11 58.9
Msa1184540 MtrunA17_Chr3g0104421 47.368 57 30 0 8 64 17 73 1.16e-11 55.8
Msa1184540 MtrunA17_Chr5g0430291 62.791 43 16 0 18 60 397 439 1.18e-11 58.9
Msa1184540 MtrunA17_Chr4g0010251 42.105 57 33 0 11 67 387 443 1.54e-11 58.5
Msa1184540 MtrunA17_Chr4g0010201 43.636 55 31 0 13 67 390 444 2.22e-11 58.2
Msa1184540 MtrunA17_Chr1g0168901 50.980 51 25 0 17 67 380 430 2.81e-11 57.8
Msa1184540 MtrunA17_Chr4g0010261 42.105 57 33 0 11 67 387 443 3.27e-11 57.8
Msa1184540 MtrunA17_Chr4g0071021 40.984 61 36 0 15 75 377 437 4.28e-11 57.4
Msa1184540 MtrunA17_Chr5g0414311 39.286 56 34 0 13 68 401 456 4.43e-11 57.4
Msa1184540 MtrunA17_Chr4g0027251 50.000 50 25 0 15 64 394 443 4.51e-11 57.4
Msa1184540 MtrunA17_Chr6g0468021 48.000 50 26 0 15 64 387 436 5.82e-11 57.0
Msa1184540 MtrunA17_Chr3g0091961 45.098 51 28 0 17 67 87 137 6.81e-11 56.6
Msa1184540 MtrunA17_Chr4g0008461 48.276 58 27 1 10 67 384 438 7.98e-11 56.6
Msa1184540 MtrunA17_Chr8g0338861 41.818 55 32 0 13 67 105 159 8.74e-11 56.2
Msa1184540 MtrunA17_Chr8g0351821 39.189 74 41 1 15 84 390 463 9.67e-11 56.2
Msa1184540 MtrunA17_Chr5g0415511 44.231 52 29 0 13 64 397 448 9.77e-11 56.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1184540 AT3G14470.1 61.224 49 19 0 20 68 413 461 1.99e-16 72.8
Msa1184540 AT3G14470.2 61.224 49 19 0 20 68 413 461 1.99e-16 72.8
Msa1184540 AT3G14460.1 58.621 58 21 1 16 70 401 458 1.08e-15 70.9

Find 14 sgRNAs with CRISPR-Local

Find 378 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGTACCTTCCCAACCAAAA+AGG 0.324075 8_1:-20312977 None:intergenic
TGAAGTGTTCAAGAAGAGTT+TGG 0.327068 8_1:+20318290 Msa1184540:CDS
AAGAAGAAATTGTAAAGCTT+TGG 0.345571 8_1:+20318251 Msa1184540:CDS
AATGTGAATTTAGTGATTGT+TGG 0.374159 8_1:-20318353 None:intergenic
GATGTTATGGGTCCCACTTT+TGG 0.388985 8_1:+20312949 None:intergenic
CACATAACCCTTGGGAAACA+TGG 0.416415 8_1:-20318221 None:intergenic
TGATAACTCAATCTCAATAA+CGG 0.463151 8_1:-20318157 None:intergenic
GATAACTCAATCTCAATAAC+GGG 0.475272 8_1:-20318156 None:intergenic
GAAGTGTTCAAGAAGAGTTT+GGG 0.480141 8_1:+20318291 Msa1184540:CDS
ACATTGTTCCATGTTTCCCA+AGG 0.504433 8_1:+20318213 Msa1184540:CDS
AGAAATTGTAAAGCTTTGGA+TGG 0.540281 8_1:+20318255 Msa1184540:CDS
CATTGTTCCATGTTTCCCAA+GGG 0.587951 8_1:+20318214 Msa1184540:CDS
AAACAACGCTTCAGAGTGGA+AGG 0.590034 8_1:-20318187 None:intergenic
TGCAAAACAACGCTTCAGAG+TGG 0.653221 8_1:-20318191 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAAAAATAAAAAAAAT+CGG + chr8_1:20313778-20313797 Msa1184540:intron 0.0%
!! TAAAAAAATTAAAAAAAAAT+CGG - chr8_1:20314747-20314766 None:intergenic 0.0%
!! ATTAAAAGACAAATATAATA+TGG - chr8_1:20313193-20313212 None:intergenic 10.0%
!!! TATTATATTTGTCTTTTAAT+TGG + chr8_1:20313193-20313212 Msa1184540:intron 10.0%
!! CTGTAAAAAAAAAAAAAAAA+TGG - chr8_1:20315001-20315020 None:intergenic 10.0%
!! TTTAAACTTTAATACAAAAA+TGG + chr8_1:20315039-20315058 Msa1184540:intron 10.0%
!! TATTATGTTATGTATTTAAA+CGG + chr8_1:20315395-20315414 Msa1184540:intron 10.0%
!! GATAAAAATAAAATAAAAGT+CGG - chr8_1:20315494-20315513 None:intergenic 10.0%
!!! TAAATTCACAATTTTGAATA+TGG - chr8_1:20313316-20313335 None:intergenic 15.0%
!! AAAAAATTCTTACTAATTGT+TGG - chr8_1:20313490-20313509 None:intergenic 15.0%
!!! AATTGTAGTTTTTATACATA+GGG - chr8_1:20314925-20314944 None:intergenic 15.0%
!!! AAATTGTAGTTTTTATACAT+AGG - chr8_1:20314924-20314943 None:intergenic 15.0%
!!! ATGTATAAAAACTACAATTT+TGG + chr8_1:20313603-20313622 Msa1184540:intron 15.0%
!! TAATTAAATAATTAAACACG+TGG + chr8_1:20314824-20314843 Msa1184540:intron 15.0%
!!! ATGTATAAAAACTACAATTT+TGG - chr8_1:20313603-20313622 None:intergenic 15.0%
!!! AAATTGTAGTTTTTATACAT+AGG + chr8_1:20314924-20314943 Msa1184540:intron 15.0%
!!! AATTGTAGTTTTTATACATA+GGG + chr8_1:20314925-20314944 Msa1184540:intron 15.0%
!!! ATGAACAAATCAATTTTTTT+GGG + chr8_1:20316465-20316484 Msa1184540:intron 15.0%
!! TTGTCAAAAAACATATAAAA+AGG + chr8_1:20317648-20317667 Msa1184540:intron 15.0%
!!! TTTCTAATTGATTTAAGATT+TGG - chr8_1:20317986-20318005 None:intergenic 15.0%
!! GAAATTAGAGAATCTATATT+AGG - chr8_1:20313447-20313466 None:intergenic 20.0%
!!! ATTGTAGTTTTTATACATAG+GGG - chr8_1:20314926-20314945 None:intergenic 20.0%
!! TAATTAAATAATTACACACG+TGG - chr8_1:20313703-20313722 None:intergenic 20.0%
!! AGGAAATTGATTATGAATAA+TGG - chr8_1:20313817-20313836 None:intergenic 20.0%
!!! ATGATGAATTAGGTTTTTTA+TGG - chr8_1:20313851-20313870 None:intergenic 20.0%
!! GGAAATTGATTATGAATAAT+GGG - chr8_1:20313816-20313835 None:intergenic 20.0%
!! AGGAAATTGATTATGAATAA+TGG - chr8_1:20313817-20313836 None:intergenic 20.0%
!!! ATTGTAGTTTTTATACATAG+GGG + chr8_1:20314926-20314945 Msa1184540:intron 20.0%
!!! GATGAACAAATCAATTTTTT+TGG + chr8_1:20316464-20316483 Msa1184540:intron 20.0%
!! AAACCAAATTATGATAAGTA+GGG - chr8_1:20317088-20317107 None:intergenic 20.0%
!! TAGAATTCATTCTATATTGT+AGG + chr8_1:20317115-20317134 Msa1184540:intron 20.0%
!! TTTGTTGGAAAATCTTTAAA+TGG + chr8_1:20317458-20317477 Msa1184540:intron 20.0%
!!! CAATTCAATCATAATTTTAC+AGG + chr8_1:20317752-20317771 Msa1184540:intron 20.0%
!! TCTTAAATCAATTAGAAAGA+AGG + chr8_1:20317988-20318007 Msa1184540:intron 20.0%
! AAATTCTAGATGCAATTGTT+TGG - chr8_1:20313017-20313036 None:intergenic 25.0%
!! ATGTATAGCTTTTACATCAA+TGG + chr8_1:20313130-20313149 Msa1184540:intron 25.0%
! ATATGGTAATTTACTTGAAG+AGG - chr8_1:20313176-20313195 None:intergenic 25.0%
! TGATTGAAACTAGTAATTGA+CGG + chr8_1:20313240-20313259 Msa1184540:intron 25.0%
!! TACTAATTGTTGGTATTTTC+TGG - chr8_1:20313480-20313499 None:intergenic 25.0%
! ACTAACTGCCATATTTATTT+AGG + chr8_1:20313526-20313545 Msa1184540:intron 25.0%
! CACTTTAGCCTAAATAAATA+TGG - chr8_1:20313537-20313556 None:intergenic 25.0%
!!! TGCAAGTTTTTGAAAGTTAA+GGG - chr8_1:20314957-20314976 None:intergenic 25.0%
!!! TTGCAAGTTTTTGAAAGTTA+AGG - chr8_1:20314956-20314975 None:intergenic 25.0%
!! CTTTCAAAAACTTGCAATTT+TGG + chr8_1:20313574-20313593 Msa1184540:intron 25.0%
!! TTGTAGTTTTTATACATAGG+GGG - chr8_1:20314927-20314946 None:intergenic 25.0%
! AAAAAATCGGCAAAAAAACA+TGG + chr8_1:20313791-20313810 Msa1184540:intron 25.0%
!!! ATTAGGTTTTTTATGGAAGA+AGG - chr8_1:20313844-20313863 None:intergenic 25.0%
!! TTGTAGTTTTTATACATAGG+GGG + chr8_1:20314927-20314946 Msa1184540:intron 25.0%
!! CTTTCAAAAACTTGCAATTT+TGG - chr8_1:20313574-20313593 None:intergenic 25.0%
!!! TTGCAAGTTTTTGAAAGTTA+AGG + chr8_1:20314956-20314975 Msa1184540:intron 25.0%
!!! TGCAAGTTTTTGAAAGTTAA+GGG + chr8_1:20314957-20314976 Msa1184540:intron 25.0%
! ATATCCAAATACCTTTGATT+AGG - chr8_1:20315110-20315129 None:intergenic 25.0%
! TGAAAGTTCACAAATCAAAT+TGG + chr8_1:20315518-20315537 Msa1184540:intron 25.0%
!!! AAATCAAATTGGTTTTCGTA+CGG + chr8_1:20315529-20315548 Msa1184540:intron 25.0%
! CTAGTTGTAAATACAGATAA+AGG - chr8_1:20315716-20315735 None:intergenic 25.0%
! AACGTTAAAGAGACAAAAAA+GGG - chr8_1:20315914-20315933 None:intergenic 25.0%
! TAACGTTAAAGAGACAAAAA+AGG - chr8_1:20315915-20315934 None:intergenic 25.0%
! TGAAATACACTTTACTTTGA+AGG + chr8_1:20316017-20316036 Msa1184540:intron 25.0%
! TTGATATAAAGTTGTCTCAA+TGG - chr8_1:20316164-20316183 None:intergenic 25.0%
! ATTGAGACAACTTTATATCA+AGG + chr8_1:20316163-20316182 Msa1184540:intron 25.0%
! TTAATTGAGTAGATGAAAAC+AGG + chr8_1:20316300-20316319 Msa1184540:intron 25.0%
! TCCATTCATTATTTGATGTA+TGG + chr8_1:20316390-20316409 Msa1184540:intron 25.0%
! ACCATACATCAAATAATGAA+TGG - chr8_1:20316394-20316413 None:intergenic 25.0%
!!! TCTATATTCACAACTAGTTT+TGG + chr8_1:20316670-20316689 Msa1184540:intron 25.0%
! TTGTACTTTGGTCAATAAAA+TGG + chr8_1:20317057-20317076 Msa1184540:intron 25.0%
! TGTACTTTGGTCAATAAAAT+GGG + chr8_1:20317058-20317077 Msa1184540:intron 25.0%
! CAAACCAAATTATGATAAGT+AGG - chr8_1:20317089-20317108 None:intergenic 25.0%
! GAGGTTGAAATTTGAATATT+CGG - chr8_1:20317144-20317163 None:intergenic 25.0%
!!! ACAGTCTTAATTTGGTTTTA+AGG - chr8_1:20317176-20317195 None:intergenic 25.0%
!! GAATAAGAAGTATGTTAGAA+AGG - chr8_1:20317280-20317299 None:intergenic 25.0%
! ATATTGTATCTGTAATAGCA+TGG - chr8_1:20317379-20317398 None:intergenic 25.0%
!! TTAAATTTGCAGCTGAATTT+TGG + chr8_1:20317426-20317445 Msa1184540:intron 25.0%
!! TAAAGATTTTCCAACAAAAC+CGG - chr8_1:20317456-20317475 None:intergenic 25.0%
! TCTTTAAATGGACAATGTAA+TGG + chr8_1:20317470-20317489 Msa1184540:intron 25.0%
! CTTTAAATGGACAATGTAAT+GGG + chr8_1:20317471-20317490 Msa1184540:intron 25.0%
! TTTAAATGGACAATGTAATG+GGG + chr8_1:20317472-20317491 Msa1184540:intron 25.0%
! AAAAAACATATAAAAAGGCG+CGG + chr8_1:20317653-20317672 Msa1184540:intron 25.0%
! TCTTAATTCCTAAAGATCTA+TGG - chr8_1:20317826-20317845 None:intergenic 25.0%
!! ATTGCTTTAAATGAAGTTGA+TGG - chr8_1:20317896-20317915 None:intergenic 25.0%
!! TTGCAAAGAAAATTTTCACA+AGG + chr8_1:20318064-20318083 Msa1184540:intron 25.0%
! TGATAACTCAATCTCAATAA+CGG - chr8_1:20318160-20318179 None:intergenic 25.0%
! AAGAAGAAATTGTAAAGCTT+TGG + chr8_1:20318251-20318270 Msa1184540:CDS 25.0%
! TGATTGTTGGAAAAATGAAA+TGG - chr8_1:20318343-20318362 None:intergenic 25.0%
AAAAAGGTTTGACCAAAAGT+GGG - chr8_1:20312964-20312983 None:intergenic 30.0%
! ACTTCAACTTTTTATTCCCA+GGG + chr8_1:20313067-20313086 Msa1184540:intron 30.0%
! TTTTTATTCCCAGGGTAAAT+TGG + chr8_1:20313075-20313094 Msa1184540:intron 30.0%
AATGTGATTAACCAGAATAG+GGG - chr8_1:20313285-20313304 None:intergenic 30.0%
GAATGTGATTAACCAGAATA+GGG - chr8_1:20313286-20313305 None:intergenic 30.0%
AGAATGTGATTAACCAGAAT+AGG - chr8_1:20313287-20313306 None:intergenic 30.0%
! CACAATTTTGAATATGGTAG+TGG - chr8_1:20313310-20313329 None:intergenic 30.0%
TGAGAAAATTGTCAACAAAG+TGG - chr8_1:20313396-20313415 None:intergenic 30.0%
! ATATGGCAGTTAGTATCTTT+TGG - chr8_1:20313520-20313539 None:intergenic 30.0%
!! AAGTTTTTGAAAGTTAAGGG+GGG - chr8_1:20314960-20314979 None:intergenic 30.0%
!! CAAGTTTTTGAAAGTTAAGG+GGG - chr8_1:20314959-20314978 None:intergenic 30.0%
!! GCAAGTTTTTGAAAGTTAAG+GGG - chr8_1:20314958-20314977 None:intergenic 30.0%
AAAAGGACCAAATATGCAAA+GGG - chr8_1:20313645-20313664 None:intergenic 30.0%
! TTTTTATGGAAGAAGGAAGA+AGG - chr8_1:20313837-20313856 None:intergenic 30.0%
! ATAATGGGAGATGATGAATT+AGG - chr8_1:20313861-20313880 None:intergenic 30.0%
! TTCTTTTGATCTTCTTGTGT+AGG - chr8_1:20314234-20314253 None:intergenic 30.0%
TTGTTGAATGAAGTGGAAAT+GGG + chr8_1:20314589-20314608 Msa1184540:intron 30.0%
! TTTTAGCCTCTTTGCATATT+TGG - chr8_1:20314892-20314911 None:intergenic 30.0%
!! GCAAGTTTTTGAAAGTTAAG+GGG + chr8_1:20314958-20314977 Msa1184540:intron 30.0%
!! CAAGTTTTTGAAAGTTAAGG+GGG + chr8_1:20314959-20314978 Msa1184540:intron 30.0%
!! AAGTTTTTGAAAGTTAAGGG+GGG + chr8_1:20314960-20314979 Msa1184540:intron 30.0%
! TCTTCAACAAGATTTGCTTA+AGG + chr8_1:20315062-20315081 Msa1184540:intron 30.0%
GCAGTAAATGAAAAGGAATT+GGG - chr8_1:20315269-20315288 None:intergenic 30.0%
TGCAGTAAATGAAAAGGAAT+TGG - chr8_1:20315270-20315289 None:intergenic 30.0%
TTCACATGCAGTAAATGAAA+AGG - chr8_1:20315276-20315295 None:intergenic 30.0%
! TTGTCTGCAACAAATTTTCA+TGG + chr8_1:20315353-20315372 Msa1184540:intron 30.0%
TTTCATGGAGCATATTAAAC+TGG + chr8_1:20315368-20315387 Msa1184540:intron 30.0%
!!! AATCAAATTGGTTTTCGTAC+GGG + chr8_1:20315530-20315549 Msa1184540:intron 30.0%
ATTCGTTAATCTCCACATAA+GGG - chr8_1:20315745-20315764 None:intergenic 30.0%
AATTCGTTAATCTCCACATA+AGG - chr8_1:20315746-20315765 None:intergenic 30.0%
ATAGTCAAGTATCCATATGT+GGG - chr8_1:20315821-20315840 None:intergenic 30.0%
AATAGTCAAGTATCCATATG+TGG - chr8_1:20315822-20315841 None:intergenic 30.0%
ACATATGGATACTTGACTAT+TGG + chr8_1:20315821-20315840 Msa1184540:intron 30.0%
ACAATCTGAATCACATTGTA+GGG + chr8_1:20315888-20315907 Msa1184540:intron 30.0%
! TTTACTTTGAAAAATGCAGC+TGG + chr8_1:20316120-20316139 Msa1184540:intron 30.0%
AACTTTATATCAAGGACTGA+AGG + chr8_1:20316171-20316190 Msa1184540:intron 30.0%
TTCATCTACTCAATTAAGTG+TGG - chr8_1:20316297-20316316 None:intergenic 30.0%
AAAATGCATGTTACATACAG+AGG + chr8_1:20316331-20316350 Msa1184540:intron 30.0%
AAATGCATGTTACATACAGA+GGG + chr8_1:20316332-20316351 Msa1184540:intron 30.0%
!!! TGTTTTAGTGTCCAAATTTG+AGG + chr8_1:20316442-20316461 Msa1184540:intron 30.0%
! GATTTGTTCATCCTCAAATT+TGG - chr8_1:20316456-20316475 None:intergenic 30.0%
! TACTTTTGCATCTGATATGT+AGG - chr8_1:20316535-20316554 None:intergenic 30.0%
GAACAGGAATCAAATCTAAA+TGG - chr8_1:20316652-20316671 None:intergenic 30.0%
ACTAGTTGTGAATATAGAAC+AGG - chr8_1:20316668-20316687 None:intergenic 30.0%
!!! TATTCACAACTAGTTTTGGT+TGG + chr8_1:20316674-20316693 Msa1184540:intron 30.0%
CATTGATCAGATATATGCAT+CGG + chr8_1:20316710-20316729 Msa1184540:intron 30.0%
GTAGGTCATTAGAAATAGAA+TGG - chr8_1:20316996-20317015 None:intergenic 30.0%
AAAATGCTCACTTTGTACTT+TGG + chr8_1:20317045-20317064 Msa1184540:intron 30.0%
AGTCCCTACTTATCATAATT+TGG + chr8_1:20317082-20317101 Msa1184540:intron 30.0%
AAACCAAATTAAGACTGTTC+TGG + chr8_1:20317178-20317197 Msa1184540:intron 30.0%
TTACCAGAACAGTCTTAATT+TGG - chr8_1:20317184-20317203 None:intergenic 30.0%
GTATGTTAGAAAGGATATGT+TGG - chr8_1:20317271-20317290 None:intergenic 30.0%
TCTACAACCTCTAATATTCA+GGG - chr8_1:20317310-20317329 None:intergenic 30.0%
ATCTACAACCTCTAATATTC+AGG - chr8_1:20317311-20317330 None:intergenic 30.0%
AATTGAGAAAGACTTCTCAT+GGG - chr8_1:20317342-20317361 None:intergenic 30.0%
AAATTGAGAAAGACTTCTCA+TGG - chr8_1:20317343-20317362 None:intergenic 30.0%
ATGAGAAGTCTTTCTCAATT+TGG + chr8_1:20317342-20317361 Msa1184540:intron 30.0%
CTTTCTCAATTTGGTTACTT+TGG + chr8_1:20317351-20317370 Msa1184540:intron 30.0%
! AAAGATTTTCCAACAAAACC+GGG - chr8_1:20317455-20317474 None:intergenic 30.0%
TTGACAAGATTACACTAGAA+CGG - chr8_1:20317635-20317654 None:intergenic 30.0%
! AAAAACATATAAAAAGGCGC+GGG + chr8_1:20317654-20317673 Msa1184540:intron 30.0%
TAATAGCTTTCTCGCATAAT+TGG + chr8_1:20317687-20317706 Msa1184540:intron 30.0%
GTTTCAAACCATAGATCTTT+AGG + chr8_1:20317815-20317834 Msa1184540:intron 30.0%
!! CTTTAAATGAAGTTGATGGT+CGG - chr8_1:20317892-20317911 None:intergenic 30.0%
!! TTTGTGAATCATGCTTTTTG+AGG + chr8_1:20317941-20317960 Msa1184540:intron 30.0%
AAGAAGGTTGTATAAAAGTG+TGG + chr8_1:20318004-20318023 Msa1184540:intron 30.0%
! GAGATTACCTAATGTTTTCA+TGG - chr8_1:20318044-20318063 None:intergenic 30.0%
! GAAAATTTTCACAAGGTGAA+CGG + chr8_1:20318071-20318090 Msa1184540:intron 30.0%
! ACGGTTTGACTTTAACATAT+TGG + chr8_1:20318090-20318109 Msa1184540:intron 30.0%
GATAACTCAATCTCAATAAC+GGG - chr8_1:20318159-20318178 None:intergenic 30.0%
! TTTTCAAACACATAACCCTT+GGG - chr8_1:20318232-20318251 None:intergenic 30.0%
!! TTTTTCAAACACATAACCCT+TGG - chr8_1:20318233-20318252 None:intergenic 30.0%
!! AGAAATTGTAAAGCTTTGGA+TGG + chr8_1:20318255-20318274 Msa1184540:CDS 30.0%
CAAAAAGGTTTGACCAAAAG+TGG - chr8_1:20312965-20312984 None:intergenic 35.0%
! CACTTTTGGTCAAACCTTTT+TGG + chr8_1:20312963-20312982 Msa1184540:CDS 35.0%
!! TTTGGTCAAACCTTTTTGGT+TGG + chr8_1:20312967-20312986 Msa1184540:CDS 35.0%
!!! TTGGTCAAACCTTTTTGGTT+GGG + chr8_1:20312968-20312987 Msa1184540:CDS 35.0%
! GACTTCAACTTTTTATTCCC+AGG + chr8_1:20313066-20313085 Msa1184540:intron 35.0%
! TTTTAGCCCCTTTGCATATT+TGG + chr8_1:20313635-20313654 Msa1184540:intron 35.0%
AAAGGACCAAATATGCAAAG+GGG - chr8_1:20313644-20313663 None:intergenic 35.0%
CAAAAGGACCAAATATGCAA+AGG - chr8_1:20313646-20313665 None:intergenic 35.0%
! CTTTGCATATTTGGTCCTTT+TGG + chr8_1:20313644-20313663 Msa1184540:intron 35.0%
! TCCTTTTTCTTTCCCTCTAT+TGG + chr8_1:20313893-20313912 Msa1184540:intron 35.0%
TCCAATAGAGGGAAAGAAAA+AGG - chr8_1:20313897-20313916 None:intergenic 35.0%
TCGACATTCACAGTAACATT+TGG + chr8_1:20313922-20313941 Msa1184540:intron 35.0%
!!! CGACAAGTCTATTTTTGACT+TGG - chr8_1:20314137-20314156 None:intergenic 35.0%
TCAAAAATAGACTTGTCGTG+AGG + chr8_1:20314139-20314158 Msa1184540:intron 35.0%
AAGAACAGCAACAAGTTATC+TGG - chr8_1:20314313-20314332 None:intergenic 35.0%
! GTTTTTGATGTTACCATCGT+CGG + chr8_1:20314333-20314352 Msa1184540:intron 35.0%
TTCTCACAAGATTCCTTTCT+GGG - chr8_1:20314430-20314449 None:intergenic 35.0%
ATTCTCACAAGATTCCTTTC+TGG - chr8_1:20314431-20314450 None:intergenic 35.0%
AGGAATCTTGTGAGAATGTT+TGG + chr8_1:20314434-20314453 Msa1184540:intron 35.0%
AATCTTGTGAGAATGTTTGG+AGG + chr8_1:20314437-20314456 Msa1184540:intron 35.0%
GTCTCCAACAATGTGTTAAA+CGG - chr8_1:20314478-20314497 None:intergenic 35.0%
CTTGAAAACAACCATCTTTC+AGG - chr8_1:20314544-20314563 None:intergenic 35.0%
!! CTGAAAGATGGTTGTTTTCA+AGG + chr8_1:20314542-20314561 Msa1184540:intron 35.0%
!! ATGGTTGTTTTCAAGGAAGA+TGG + chr8_1:20314549-20314568 Msa1184540:intron 35.0%
GTTGTTGAATGAAGTGGAAA+TGG + chr8_1:20314588-20314607 Msa1184540:intron 35.0%
TTCCTCTTCAACAACTTCTT+TGG - chr8_1:20314616-20314635 None:intergenic 35.0%
AAGTTGTTGAAGAGGAAGAT+GGG + chr8_1:20314619-20314638 Msa1184540:intron 35.0%
ATGCAAAGAGGCTAAAACTT+AGG + chr8_1:20314895-20314914 Msa1184540:intron 35.0%
TGCAAAGAGGCTAAAACTTA+GGG + chr8_1:20314896-20314915 Msa1184540:intron 35.0%
AGAAAGTCTTGCCTAATCAA+AGG + chr8_1:20315096-20315115 Msa1184540:intron 35.0%
!! CTTGCCTAATCAAAGGTATT+TGG + chr8_1:20315103-20315122 Msa1184540:intron 35.0%
! TTTATTTCTTTCGCCAAAGC+TGG + chr8_1:20315142-20315161 Msa1184540:intron 35.0%
GTTGTAGTAAATACCAGCTT+TGG - chr8_1:20315158-20315177 None:intergenic 35.0%
ATAGAATCCAAACCACCTTA+GGG - chr8_1:20315237-20315256 None:intergenic 35.0%
GTGTTCAAGCATTACAAACA+AGG + chr8_1:20315421-20315440 Msa1184540:intron 35.0%
!! ACAAGGTACATTCGTTTTTG+AGG + chr8_1:20315438-20315457 Msa1184540:intron 35.0%
AAAGGACTAAGAAACAAGCA+AGG - chr8_1:20315698-20315717 None:intergenic 35.0%
TGCTAGGAAGACTAAGTTAT+GGG + chr8_1:20315794-20315813 Msa1184540:intron 35.0%
GACAATCTGAATCACATTGT+AGG + chr8_1:20315887-20315906 Msa1184540:intron 35.0%
CTTGAGAAAAGAATGTGATG+AGG + chr8_1:20315977-20315996 Msa1184540:intron 35.0%
TTGAAGGTTGCGACTTATAA+AGG + chr8_1:20316033-20316052 Msa1184540:intron 35.0%
AGTTGATCTTGCACATTGAA+AGG + chr8_1:20316203-20316222 Msa1184540:intron 35.0%
AATGCATGTTACATACAGAG+GGG + chr8_1:20316333-20316352 Msa1184540:intron 35.0%
TAAGTGGGATAGAGAAGTTT+CGG + chr8_1:20316365-20316384 Msa1184540:intron 35.0%
CCATGACACAACTAATCATA+TGG - chr8_1:20316594-20316613 None:intergenic 35.0%
! CCATATGATTAGTTGTGTCA+TGG + chr8_1:20316591-20316610 Msa1184540:intron 35.0%
GTTGTGTCATGGTATTTCTT+TGG + chr8_1:20316602-20316621 Msa1184540:intron 35.0%
CGATGCATATATCTGATCAA+TGG - chr8_1:20316712-20316731 None:intergenic 35.0%
CTTTGCAAGAATCTATCAGT+TGG + chr8_1:20316871-20316890 Msa1184540:intron 35.0%
TGAAGTCTTAATTGCAGAGT+AGG - chr8_1:20317014-20317033 None:intergenic 35.0%
TGGAATATGCCTAATGATCA+TGG + chr8_1:20317503-20317522 Msa1184540:intron 35.0%
CAAAATGTTAACTTTCAGCC+TGG + chr8_1:20317551-20317570 Msa1184540:intron 35.0%
!! TGAATCATGCTTTTTGAGGA+AGG + chr8_1:20317945-20317964 Msa1184540:intron 35.0%
! CCTAATGTTTTCATGGCTAA+AGG - chr8_1:20318037-20318056 None:intergenic 35.0%
CCTTTAGCCATGAAAACATT+AGG + chr8_1:20318034-20318053 Msa1184540:intron 35.0%
ACATATTGGAGACTGATATG+TGG + chr8_1:20318104-20318123 Msa1184540:intron 35.0%
! TGAAGTGTTCAAGAAGAGTT+TGG + chr8_1:20318290-20318309 Msa1184540:CDS 35.0%
! GAAGTGTTCAAGAAGAGTTT+GGG + chr8_1:20318291-20318310 Msa1184540:CDS 35.0%
! TGGAAAAATGAAATGGACTC+TGG - chr8_1:20318336-20318355 None:intergenic 35.0%
!!! TCAAACCTTTTTGGTTGGGA+AGG + chr8_1:20312972-20312991 Msa1184540:CDS 40.0%
TTCCGAACCATTAGTCCTTA+TGG + chr8_1:20313358-20313377 Msa1184540:intron 40.0%
TCCGAACCATTAGTCCTTAT+GGG + chr8_1:20313359-20313378 Msa1184540:intron 40.0%
TGCAAAGGGGCTAAAACTTA+GGG - chr8_1:20313631-20313650 None:intergenic 40.0%
ATGCAAAGGGGCTAAAACTT+AGG - chr8_1:20313632-20313651 None:intergenic 40.0%
ACTGGTCAAAATTGGCCAAA+AGG - chr8_1:20313662-20313681 None:intergenic 40.0%
! AGACGTTGACTGGTCAAAAT+TGG - chr8_1:20313670-20313689 None:intergenic 40.0%
TGTCGAGTTACTCCAATAGA+GGG - chr8_1:20313908-20313927 None:intergenic 40.0%
ATGTCGAGTTACTCCAATAG+AGG - chr8_1:20313909-20313928 None:intergenic 40.0%
AAGGTTGAAGCAAATGGCAA+TGG - chr8_1:20314049-20314068 None:intergenic 40.0%
GTTAGCAAGGTTGAAGCAAA+TGG - chr8_1:20314055-20314074 None:intergenic 40.0%
!! AGATTCAGGATGCTGCTTTA+TGG + chr8_1:20314168-20314187 Msa1184540:intron 40.0%
AACAGCAACAAGTTATCTGG+CGG - chr8_1:20314310-20314329 None:intergenic 40.0%
TGAGAATGTTTGGAGGTTGA+CGG + chr8_1:20314444-20314463 Msa1184540:intron 40.0%
AGAGCCGTTTAACACATTGT+TGG + chr8_1:20314471-20314490 Msa1184540:intron 40.0%
CATTGTTGGAGACATTGAAC+TGG + chr8_1:20314485-20314504 Msa1184540:intron 40.0%
!!! AAGGAAGATGGTTTTGAGTC+TGG + chr8_1:20314561-20314580 Msa1184540:intron 40.0%
GGTGAAGTTGTTGAATGAAG+TGG + chr8_1:20314582-20314601 Msa1184540:intron 40.0%
GACCAAAGAAGTTGTTGAAG+AGG + chr8_1:20314611-20314630 Msa1184540:intron 40.0%
GAAGTTGTTGAAGAGGAAGA+TGG + chr8_1:20314618-20314637 Msa1184540:intron 40.0%
! CCTTCAGGTTCTCTTCAAAT+CGG - chr8_1:20314667-20314686 None:intergenic 40.0%
AACAACTTCTCTTCACCTTC+AGG - chr8_1:20314682-20314701 None:intergenic 40.0%
GTGAAGAGAAGTTGTTGAAG+AGG + chr8_1:20314686-20314705 Msa1184540:intron 40.0%
AGAAGTTGTTGAAGAGGAAG+AGG + chr8_1:20314617-20314636 Msa1184540:intron 40.0%
GAAGTTGTTGAAGAGGAAGA+GGG + chr8_1:20314618-20314637 Msa1184540:intron 40.0%
CTTTGCATATTTGGTCCTTC+TGG - chr8_1:20314883-20314902 None:intergenic 40.0%
GAAGGACCAAATATGCAAAG+AGG + chr8_1:20314883-20314902 Msa1184540:intron 40.0%
GCAAAGAGGCTAAAACTTAG+GGG + chr8_1:20314897-20314916 Msa1184540:intron 40.0%
TAGAATCCAAACCACCTTAG+GGG - chr8_1:20315236-20315255 None:intergenic 40.0%
GATAGAATCCAAACCACCTT+AGG - chr8_1:20315238-20315257 None:intergenic 40.0%
AACCTCTTTCCGAGGTTATT+TGG + chr8_1:20315461-20315480 Msa1184540:intron 40.0%
TACCAAATAACCTCGGAAAG+AGG - chr8_1:20315466-20315485 None:intergenic 40.0%
! TTAGTCTTCCTAGCACTATG+TGG - chr8_1:20315789-20315808 None:intergenic 40.0%
GTGCTAGGAAGACTAAGTTA+TGG + chr8_1:20315793-20315812 Msa1184540:intron 40.0%
TAAGTTATGGGTCCCACATA+TGG + chr8_1:20315806-20315825 Msa1184540:intron 40.0%
! CTTTGAAAAATGCAGCTGGA+TGG + chr8_1:20316124-20316143 Msa1184540:intron 40.0%
! TGCTCAGAGCTTTATACCAA+TGG + chr8_1:20316244-20316263 Msa1184540:intron 40.0%
TGTGAGCAAGTACTTACCAT+TGG - chr8_1:20316263-20316282 None:intergenic 40.0%
TACTTGCTCACAGCATTCTT+CGG + chr8_1:20316271-20316290 Msa1184540:intron 40.0%
AGAGGGGAGTAAGAATTAAG+TGG + chr8_1:20316349-20316368 Msa1184540:intron 40.0%
GAGGGGAGTAAGAATTAAGT+GGG + chr8_1:20316350-20316369 Msa1184540:intron 40.0%
!! GGTATGTTGACTTCTCATGT+AGG - chr8_1:20316509-20316528 None:intergenic 40.0%
TTGCATCTGATATGTAGGCT+CGG - chr8_1:20316530-20316549 None:intergenic 40.0%
CATGGGTCATAGAACTTTCA+CGG - chr8_1:20316745-20316764 None:intergenic 40.0%
GCTCTTTGCAGATTGAATGA+TGG + chr8_1:20316771-20316790 Msa1184540:intron 40.0%
ACATGAGAAGCTGAATGGTT+AGG - chr8_1:20316816-20316835 None:intergenic 40.0%
TCATGACATGAGAAGCTGAA+TGG - chr8_1:20316821-20316840 None:intergenic 40.0%
TCAGCTTCTCATGTCATGAT+AGG + chr8_1:20316822-20316841 Msa1184540:intron 40.0%
TGTCATGATAGGTCTTCACA+AGG + chr8_1:20316833-20316852 Msa1184540:intron 40.0%
TATCAGTTGGCAAGAGAAGA+AGG + chr8_1:20316884-20316903 Msa1184540:intron 40.0%
TATTGGACTTGAGCTCTCTT+TGG + chr8_1:20316909-20316928 Msa1184540:intron 40.0%
ATTGGACTTGAGCTCTCTTT+GGG + chr8_1:20316910-20316929 Msa1184540:intron 40.0%
AGCTTCATCAACCACTGATA+TGG + chr8_1:20316958-20316977 Msa1184540:intron 40.0%
TCTCACTTTCACCATATCAG+TGG - chr8_1:20316972-20316991 None:intergenic 40.0%
!!! GGTTTTAAGGTATTCAGCAG+AGG - chr8_1:20317163-20317182 None:intergenic 40.0%
! AATGTAATGGGGCGTTATGA+TGG + chr8_1:20317483-20317502 Msa1184540:intron 40.0%
TTCCTCGATCCATGATCATT+AGG - chr8_1:20317515-20317534 None:intergenic 40.0%
! ATATAAAAAGGCGCGGGAAA+TGG + chr8_1:20317660-20317679 Msa1184540:intron 40.0%
TGATATGTGGCATGTATCGA+AGG + chr8_1:20318117-20318136 Msa1184540:intron 40.0%
GATATGTGGCATGTATCGAA+GGG + chr8_1:20318118-20318137 Msa1184540:intron 40.0%
ACATTGTTCCATGTTTCCCA+AGG + chr8_1:20318213-20318232 Msa1184540:CDS 40.0%
CATTGTTCCATGTTTCCCAA+GGG + chr8_1:20318214-20318233 Msa1184540:CDS 40.0%
TCGTACCTTCCCAACCAAAA+AGG - chr8_1:20312980-20312999 None:intergenic 45.0%
ACCATGCTCCAATTTACCCT+GGG - chr8_1:20313086-20313105 None:intergenic 45.0%
TGAAGAGGAAGAAGATGTGC+TGG - chr8_1:20313161-20313180 None:intergenic 45.0%
CGAATGTGTTTCCCCTATTC+TGG + chr8_1:20313271-20313290 Msa1184540:intron 45.0%
CCCCATAAGGACTAATGGTT+CGG - chr8_1:20313363-20313382 None:intergenic 45.0%
CCGAACCATTAGTCCTTATG+GGG + chr8_1:20313360-20313379 Msa1184540:intron 45.0%
TGGTTAATGAGCTCCCCATA+AGG - chr8_1:20313376-20313395 None:intergenic 45.0%
CAAAGGGGCTAAAACTTAGG+GGG - chr8_1:20313629-20313648 None:intergenic 45.0%
GCAAAGGGGCTAAAACTTAG+GGG - chr8_1:20313630-20313649 None:intergenic 45.0%
AGTTGGAATGGCAGGAATAG+AGG - chr8_1:20314003-20314022 None:intergenic 45.0%
GACTTGGAGAACAACGACAA+TGG - chr8_1:20314121-20314140 None:intergenic 45.0%
TCGTGAGGAAGTTCAGATTC+AGG + chr8_1:20314154-20314173 Msa1184540:intron 45.0%
ATCGTCATCGGATCTGTAGT+GGG - chr8_1:20314274-20314293 None:intergenic 45.0%
AATCGTCATCGGATCTGTAG+TGG - chr8_1:20314275-20314294 None:intergenic 45.0%
TCCGATGACGATTTCAGCAA+TGG + chr8_1:20314282-20314301 Msa1184540:intron 45.0%
GCCATTGCTGAAATCGTCAT+CGG - chr8_1:20314286-20314305 None:intergenic 45.0%
TTACCATCGTCGGCAAAGAA+AGG + chr8_1:20314343-20314362 Msa1184540:intron 45.0%
! TTTCTGGGAAATTCCCTCTG+CGG - chr8_1:20314415-20314434 None:intergenic 45.0%
GAGAATGTTTGGAGGTTGAC+GGG + chr8_1:20314445-20314464 Msa1184540:intron 45.0%
!! GACGGTGAAGGCTTTGAATT+GGG + chr8_1:20314510-20314529 Msa1184540:intron 45.0%
!! ACGGTGAAGGCTTTGAATTG+GGG + chr8_1:20314511-20314530 Msa1184540:intron 45.0%
! CCGATTTGAAGAGAACCTGA+AGG + chr8_1:20314664-20314683 Msa1184540:intron 45.0%
GAAGAGGAAGAGGGTTTGAA+AGG + chr8_1:20314702-20314721 Msa1184540:intron 45.0%
AGACGTTGACCGGTCAAAAT+TGG + chr8_1:20314857-20314876 Msa1184540:intron 45.0%
!! TCCTTCTGGCCAATTTTGAC+CGG - chr8_1:20314869-20314888 None:intergenic 45.0%
ACTTTGTTCCTTTGCCCCTA+AGG + chr8_1:20315219-20315238 Msa1184540:intron 45.0%
!! TTTTGAGGAACCTCTTTCCG+AGG + chr8_1:20315453-20315472 Msa1184540:intron 45.0%
GGCGACATACCAAATAACCT+CGG - chr8_1:20315473-20315492 None:intergenic 45.0%
AACTAGTCGCATCCCTTATG+TGG + chr8_1:20315730-20315749 Msa1184540:intron 45.0%
AATGTGCAAGATCAACTCCC+TGG - chr8_1:20316200-20316219 None:intergenic 45.0%
CTGCAAAGAGCAATGCACAT+GGG - chr8_1:20316762-20316781 None:intergenic 45.0%
TCTGCAAAGAGCAATGCACA+TGG - chr8_1:20316763-20316782 None:intergenic 45.0%
GGCAAGAGAAGAAGGCTTAT+TGG + chr8_1:20316892-20316911 Msa1184540:intron 45.0%
!! TTGAGCTCTCTTTGGGATTC+CGG + chr8_1:20316917-20316936 Msa1184540:intron 45.0%
TCAGATGGGATTTGAACTCC+CGG - chr8_1:20316939-20316958 None:intergenic 45.0%
!! GTGGTTGATGAAGCTCAGAT+GGG - chr8_1:20316953-20316972 None:intergenic 45.0%
!! AGTGGTTGATGAAGCTCAGA+TGG - chr8_1:20316954-20316973 None:intergenic 45.0%
TGCAGTGCCCTGAATATTAG+AGG + chr8_1:20317300-20317319 Msa1184540:intron 45.0%
!!! TTTTGGCTTCCCGGTTTTGT+TGG + chr8_1:20317443-20317462 Msa1184540:intron 45.0%
TGCCTAATGATCATGGATCG+AGG + chr8_1:20317510-20317529 Msa1184540:intron 45.0%
GATCATGGATCGAGGAAACT+AGG + chr8_1:20317518-20317537 Msa1184540:intron 45.0%
ATCTCAAAACAGAGAGCTCC+AGG - chr8_1:20317572-20317591 None:intergenic 45.0%
!!! CTCTCTGTTTTGAGATGCTC+TGG + chr8_1:20317576-20317595 Msa1184540:intron 45.0%
AAACAACGCTTCAGAGTGGA+AGG - chr8_1:20318190-20318209 None:intergenic 45.0%
TGCAAAACAACGCTTCAGAG+TGG - chr8_1:20318194-20318213 None:intergenic 45.0%
CACATAACCCTTGGGAAACA+TGG - chr8_1:20318224-20318243 None:intergenic 45.0%
TCCCAGGGTAAATTGGAGCA+TGG + chr8_1:20313082-20313101 Msa1184540:intron 50.0%
CACCATGCTCCAATTTACCC+TGG - chr8_1:20313087-20313106 None:intergenic 50.0%
GAGCTCCCCATAAGGACTAA+TGG - chr8_1:20313368-20313387 None:intergenic 50.0%
TTGACCAGTCAACGTCTACG+TGG + chr8_1:20313673-20313692 Msa1184540:intron 50.0%
TGGAGCAAAGTTGGAATGGC+AGG - chr8_1:20314011-20314030 None:intergenic 50.0%
CTGCTGGAGCAAAGTTGGAA+TGG - chr8_1:20314015-20314034 None:intergenic 50.0%
AATGGAAACACTGCTGCTGC+TGG - chr8_1:20314031-20314050 None:intergenic 50.0%
TACTACATCTGCTGCTGCTG+CGG - chr8_1:20314092-20314111 None:intergenic 50.0%
GCAGAGGGAATTTCCCAGAA+AGG + chr8_1:20314414-20314433 Msa1184540:intron 50.0%
GGAGACATTGAACTGGTCGA+CGG + chr8_1:20314492-20314511 Msa1184540:intron 50.0%
ATTGAACTGGTCGACGGTGA+AGG + chr8_1:20314498-20314517 Msa1184540:intron 50.0%
!! CGACGGTGAAGGCTTTGAAT+TGG + chr8_1:20314509-20314528 Msa1184540:intron 50.0%
!! CGGTGAAGGCTTTGAATTGG+GGG + chr8_1:20314512-20314531 Msa1184540:intron 50.0%
!! GAAGGCTTTGAATTGGGGGA+TGG + chr8_1:20314516-20314535 Msa1184540:intron 50.0%
AGGAAGAGGGTTTGAAAGGC+AGG + chr8_1:20314706-20314725 Msa1184540:intron 50.0%
ACCGGTCAAAATTGGCCAGA+AGG + chr8_1:20314865-20314884 Msa1184540:intron 50.0%
TTGTTCCTTTGCCCCTAAGG+TGG + chr8_1:20315222-20315241 Msa1184540:intron 50.0%
TCCTAGCACTATGTGGCGAT+GGG - chr8_1:20315782-20315801 None:intergenic 50.0%
TTCCTAGCACTATGTGGCGA+TGG - chr8_1:20315783-20315802 None:intergenic 50.0%
GTGTGCCTGTGCAGAAAACA+CGG + chr8_1:20315952-20315971 Msa1184540:intron 50.0%
TGTGCCTGTGCAGAAAACAC+GGG + chr8_1:20315953-20315972 Msa1184540:intron 50.0%
! AAGTCCCGTGTTTTCTGCAC+AGG - chr8_1:20315960-20315979 None:intergenic 50.0%
ATCAAGGACTGAAGGAAGCC+AGG + chr8_1:20316179-20316198 Msa1184540:intron 50.0%
TCAAGGACTGAAGGAAGCCA+GGG + chr8_1:20316180-20316199 Msa1184540:intron 50.0%
GGGTCATAGAACTTTCACGG+AGG - chr8_1:20316742-20316761 None:intergenic 50.0%
GATTGAATGATGGCTCCTGC+TGG + chr8_1:20316781-20316800 Msa1184540:intron 50.0%
!! GTTAGGTAGCTCTAACCAGC+AGG - chr8_1:20316799-20316818 None:intergenic 50.0%
!! TGAGCTCTCTTTGGGATTCC+GGG + chr8_1:20316918-20316937 Msa1184540:intron 50.0%
!!! GCAGCTGAATTTTGGCTTCC+CGG + chr8_1:20317434-20317453 Msa1184540:intron 50.0%
CATGCCACGTAGACGTTGAC+TGG - chr8_1:20313680-20313699 None:intergenic 55.0%
TGCTGCTGCTGGAGCAAAGT+TGG - chr8_1:20314020-20314039 None:intergenic 55.0%
CCTCCTTTCTTTGCCGACGA+TGG - chr8_1:20314349-20314368 None:intergenic 55.0%
CCATCGTCGGCAAAGAAAGG+AGG + chr8_1:20314346-20314365 Msa1184540:intron 55.0%
GTCGGCAAAGAAAGGAGGAG+AGG + chr8_1:20314351-20314370 Msa1184540:intron 55.0%
GGGGGATGGAACCTGAAAGA+TGG + chr8_1:20314530-20314549 Msa1184540:intron 55.0%
TTGACCGGTCAACGTCTACG+TGG - chr8_1:20314854-20314873 None:intergenic 55.0%
CCAAACCACCTTAGGGGCAA+AGG - chr8_1:20315230-20315249 None:intergenic 55.0%
CCTTTGCCCCTAAGGTGGTT+TGG + chr8_1:20315227-20315246 Msa1184540:intron 55.0%
TCCCATCGCCACATAGTGCT+AGG + chr8_1:20315778-20315797 Msa1184540:intron 55.0%
GGCTGCGGTTGCAGTTAGCA+AGG - chr8_1:20314068-20314087 None:intergenic 60.0%
TACATCTGCTGCTGCTGCGG+AGG - chr8_1:20314089-20314108 None:intergenic 60.0%
TGAAAGGGGTCGACCGCAGA+GGG + chr8_1:20314399-20314418 Msa1184540:intron 60.0%
CGTGCCACGTAGACGTTGAC+CGG + chr8_1:20314847-20314866 Msa1184540:intron 60.0%
!! AGGAGGAGAGGCATCTGCGC+CGG + chr8_1:20314363-20314382 Msa1184540:intron 65.0%
CTTTCACTCTGCCCCGGACC+CGG - chr8_1:20314385-20314404 None:intergenic 65.0%
GGGTCCGGGGCAGAGTGAAA+GGG + chr8_1:20314384-20314403 Msa1184540:intron 65.0%
GGTCCGGGGCAGAGTGAAAG+GGG + chr8_1:20314385-20314404 Msa1184540:intron 65.0%
CGACCCCTTTCACTCTGCCC+CGG - chr8_1:20314391-20314410 None:intergenic 65.0%
GTGAAAGGGGTCGACCGCAG+AGG + chr8_1:20314398-20314417 Msa1184540:intron 65.0%
TGCTGCTGCTGCGGAGGCTG+CGG - chr8_1:20314083-20314102 None:intergenic 70.0%
!! GGAGGAGAGGCATCTGCGCC+GGG + chr8_1:20314364-20314383 Msa1184540:intron 70.0%
!! AGAGGCATCTGCGCCGGGTC+CGG + chr8_1:20314369-20314388 Msa1184540:intron 70.0%
CGGGTCCGGGGCAGAGTGAA+AGG + chr8_1:20314383-20314402 Msa1184540:intron 70.0%
! GAGGCATCTGCGCCGGGTCC+GGG + chr8_1:20314370-20314389 Msa1184540:intron 75.0%
AGGCATCTGCGCCGGGTCCG+GGG + chr8_1:20314371-20314390 Msa1184540:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 20312955 20318366 20312955 ID=Msa1184540;Name=Msa1184540
chr8_1 mRNA 20312955 20318366 20312955 ID=Msa1184540-mRNA-1;Parent=Msa1184540;Name=Msa1184540-mRNA-1;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|0|0|2|0|88
chr8_1 exon 20312955 20312993 20312955 ID=Msa1184540-mRNA-1:exon:7843;Parent=Msa1184540-mRNA-1
chr8_1 exon 20318139 20318366 20318139 ID=Msa1184540-mRNA-1:exon:7844;Parent=Msa1184540-mRNA-1
chr8_1 CDS 20312955 20312993 20312955 ID=Msa1184540-mRNA-1:cds;Parent=Msa1184540-mRNA-1
chr8_1 CDS 20318139 20318366 20318139 ID=Msa1184540-mRNA-1:cds;Parent=Msa1184540-mRNA-1
Gene Sequence

>Msa1184540

ATGGGTCCCACTTTTGGTCAAACCTTTTTGGTTGGGAAGGGTGATGATGAAATTAACCCGTTATTGAGATTGAGTTATCACAATCTTCCTTCCACTCTGAAGCGTTGTTTTGCACATTGTTCCATGTTTCCCAAGGGTTATGTGTTTGAAAAAGAAGAAATTGTAAAGCTTTGGATGGCAGAAGCTTTACTGAAGTGTTCAAGAAGAGTTTGGGTAATGAATTCTTCGATGATCCAGAGTCCATTTCATTTTTCCAACAATCACTAA
Protein sequence

>Msa1184540

MGPTFGQTFLVGKGDDEINPLLRLSYHNLPSTLKRCFAHCSMFPKGYVFEKEEIVKLWMAEALLKCSRRVWVMNSSMIQSPFHFSNNH*