AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0664970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0664970 MtrunA17_Chr4g0003061 98.266 519 9 0 1 519 1 519 0.0 1048
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0664970 AT1G80460.1 77.969 522 112 1 1 519 1 522 0.0 832
Msa0664970 AT1G80460.2 71.839 522 104 2 1 519 1 482 0.0 771

Find 120 sgRNAs with CRISPR-Local

Find 602 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTTATTCCTTTCATTAA+AGG 0.184782 4_4:-4269853 None:intergenic
CAATAGACACTTGGTTGATT+TGG 0.226109 4_4:+4268225 Msa0664970:CDS
GATTCAATGCACAAAGATTC+TGG 0.239459 4_4:+4268920 Msa0664970:CDS
CCGGATTAGCTGTTGGGATT+TGG 0.260537 4_4:+4269600 Msa0664970:CDS
CTCTTCACAATGCTCTTGTT+TGG 0.272363 4_4:+4266948 Msa0664970:CDS
GGATCCTTCGAGTGCATAAT+TGG 0.273560 4_4:-4268636 None:intergenic
ATTATAGGCAATGTTTCTTC+TGG 0.283345 4_4:+4268410 Msa0664970:CDS
GCATGATCCAATGGAGATAT+TGG 0.330740 4_4:+4266787 Msa0664970:CDS
TCTTCTGGATGGCCAGTTGC+TGG 0.334542 4_4:+4268425 Msa0664970:CDS
GCACTGAAATATGTGCTAAT+AGG 0.336748 4_4:-4268125 None:intergenic
ATCAGTAATTCAGAAATTAT+AGG 0.336952 4_4:+4268395 Msa0664970:CDS
TTCGTACTACCTCTGTTTGC+AGG 0.343790 4_4:+4266978 Msa0664970:CDS
TAGGTTCATCAGCATTGTTC+GGG 0.358557 4_4:-4268303 None:intergenic
TATAGAGGCTCTGGCATTAG+AGG 0.360156 4_4:+4268727 Msa0664970:CDS
AAAGAGAGACTACTCTTGTT+TGG 0.360374 4_4:+4266906 Msa0664970:CDS
TTAGGTTCATCAGCATTGTT+CGG 0.360447 4_4:-4268304 None:intergenic
ATCCCAATCGCTGGATGTTT+AGG 0.365473 4_4:+4268449 Msa0664970:CDS
CTCTAATGGTTGAAGAAAAT+AGG 0.366750 4_4:+4269681 Msa0664970:CDS
CATTACCAAGGCAGTGGATA+AGG 0.374568 4_4:+4266826 Msa0664970:CDS
TTTGAAACTTCTGTGGTTGA+TGG 0.380869 4_4:+4268148 Msa0664970:CDS
GCATAATTGGTTGGAGCATT+CGG 0.386294 4_4:-4268623 None:intergenic
GAAGGATCCGTTGCTATTGC+TGG 0.386324 4_4:+4268650 Msa0664970:CDS
TGGTTGATTTGGAACTTAAC+CGG 0.394053 4_4:+4268236 Msa0664970:CDS
CCAAATCCCAACAGCTAATC+CGG 0.396390 4_4:-4269600 None:intergenic
TGTTGGGCAGGCGGATTTGT+TGG 0.401082 4_4:+4269517 Msa0664970:intron
ATATTTGATGATTGAATTTG+TGG 0.412135 4_4:-4265583 None:intergenic
GATAAATCAGCTAAACCAAT+TGG 0.412511 4_4:+4265736 Msa0664970:CDS
TTGGACAAGCGTGCCGTAAA+GGG 0.413690 4_4:+4268492 Msa0664970:CDS
GACAAAGGATTGAAAGCTAT+TGG 0.414357 4_4:+4266872 Msa0664970:CDS
TTGCTGGAGCTGCGGTGCAG+TGG 0.423140 4_4:+4268666 Msa0664970:CDS
ATGCAGCCGGATTAGCTGTT+GGG 0.423707 4_4:+4269594 Msa0664970:CDS
TGCTAAAGATATAGAGGCTC+TGG 0.423985 4_4:+4268718 Msa0664970:CDS
ATCTGCTACTGCTTGTTCCT+TGG 0.424132 4_4:-4265702 None:intergenic
TGGGATTTGAAGTGCTTTCA+AGG 0.425709 4_4:-4268351 None:intergenic
AAGAGTAGTCTCTCTTTGAT+TGG 0.427095 4_4:-4266900 None:intergenic
CTTGGACAAGCGTGCCGTAA+AGG 0.431970 4_4:+4268491 Msa0664970:CDS
CTTCTGTTCTTCATATACTT+AGG 0.439667 4_4:-4269928 None:intergenic
CTTCATATACTTAGGAATGA+AGG 0.441618 4_4:-4269920 None:intergenic
TGTTGCCTTATCCACTGCCT+TGG 0.460974 4_4:-4266831 None:intergenic
TCACAATGCTCTTGTTTGGA+TGG 0.461624 4_4:+4266952 Msa0664970:CDS
GATCAACATGCGGCAATGCT+TGG 0.462984 4_4:+4268473 Msa0664970:CDS
TACAAATGCTAAAGATATAG+AGG 0.466654 4_4:+4268712 Msa0664970:CDS
CACCTAAACATCCAGCGATT+GGG 0.469707 4_4:-4268451 None:intergenic
TTGAAACAGGAGACTGGAAA+AGG 0.470396 4_4:+4268058 Msa0664970:intron
TCAACTTGATGAGATCCAAT+TGG 0.485313 4_4:-4265751 None:intergenic
AGACTGGAAAAGGAGTTATC+TGG 0.485413 4_4:+4268068 Msa0664970:CDS
GGTAGATTCATCCCAGTTGA+GGG 0.489859 4_4:-4268330 None:intergenic
TCAACTATAGCTTATAAGCT+TGG 0.494881 4_4:+4268599 Msa0664970:CDS
GCTGTTGTTTCAATGTCAGC+TGG 0.495390 4_4:-4269557 None:intergenic
TAGGCAATGTTTCTTCTGGA+TGG 0.500957 4_4:+4268414 Msa0664970:CDS
ACACTCTCCAATATCTCCAT+TGG 0.503678 4_4:-4266794 None:intergenic
CAGTGGCTTAGAGATGGTCT+TGG 0.511553 4_4:+4268683 Msa0664970:CDS
TACTTCGTTCCTGCCTTCAA+CGG 0.512729 4_4:+4268770 Msa0664970:CDS
TCACCTAAACATCCAGCGAT+TGG 0.515930 4_4:-4268452 None:intergenic
GACATTGAAACAACAGCACT+TGG 0.517787 4_4:+4269563 Msa0664970:CDS
GCGATTGGGATACCAGCAAC+TGG 0.520352 4_4:-4268437 None:intergenic
CAATCCTCCTTTCACTCCAC+CGG 0.520536 4_4:-4268255 None:intergenic
CGGAGCAAACAATCCGTTGA+AGG 0.521467 4_4:-4268783 None:intergenic
AACTTAACCGGTGGAGTGAA+AGG 0.522805 4_4:+4268248 Msa0664970:CDS
GCTTTCATTCTACTGAATAC+CGG 0.525684 4_4:+4268542 Msa0664970:CDS
AGGTAGATTCATCCCAGTTG+AGG 0.526716 4_4:-4268331 None:intergenic
ATTCATAATTACCCTGCTTG+TGG 0.528009 4_4:-4265790 None:intergenic
CCTTCGAGTGCATAATTGGT+TGG 0.530517 4_4:-4268632 None:intergenic
CTTGGAGCAGCCTATGCAGC+CGG 0.534264 4_4:+4269581 Msa0664970:CDS
ACTCAGTTCTATCCACAAGC+AGG 0.534411 4_4:+4265778 Msa0664970:CDS
GCATTGGTTCCTTTAATGAA+AGG 0.539079 4_4:+4269844 Msa0664970:three_prime_UTR
CAACCTCTTGATGCAGACTC+AGG 0.539217 4_4:+4269003 Msa0664970:CDS
GCAAACAATCCGTTGAAGGC+AGG 0.539309 4_4:-4268779 None:intergenic
AACGAAGTAAACACCACCAT+TGG 0.540620 4_4:-4268756 None:intergenic
GTGGATAAGGCAACAGCTGA+TGG 0.545692 4_4:+4266839 Msa0664970:CDS
GCTAAAAGTACGTATGGTAC+AGG 0.547345 4_4:+4268518 Msa0664970:CDS
GTTGCTGGTATCCCAATCGC+TGG 0.548254 4_4:+4268440 Msa0664970:CDS
GGTTTGCATTACCAAGGCAG+TGG 0.553429 4_4:+4266820 Msa0664970:CDS
TGATTTAACTACTCCTTCGC+CGG 0.553584 4_4:-4268561 None:intergenic
AACAGCTAATCCGGCTGCAT+AGG 0.557636 4_4:-4269591 None:intergenic
CGTTGCTATTGCTGGAGCTG+CGG 0.558953 4_4:+4268658 Msa0664970:CDS
GGGGAGGCTAAAAGTACGTA+TGG 0.562365 4_4:+4268512 Msa0664970:CDS
TCAGTGCTTTGAAACTTCTG+TGG 0.564226 4_4:+4268141 Msa0664970:CDS
TGTTTGGAACAATAGACACT+TGG 0.574976 4_4:+4268216 Msa0664970:CDS
TATGCAGCCGGATTAGCTGT+TGG 0.578831 4_4:+4269593 Msa0664970:CDS
TTCATTGGTGCAATTGACCA+AGG 0.579046 4_4:+4265685 Msa0664970:CDS
CTTGTTTGGAGCAAATCCAC+TGG 0.582009 4_4:+4266920 Msa0664970:CDS
TGGACAAGCGTGCCGTAAAG+GGG 0.584821 4_4:+4268493 Msa0664970:CDS
CGCAGCTCCAGCAATAGCAA+CGG 0.585543 4_4:-4268657 None:intergenic
GCGGTGCAGTGGCTTAGAGA+TGG 0.585645 4_4:+4268677 Msa0664970:CDS
TTTCTTCAACCATTAGAGGA+CGG 0.587520 4_4:-4269676 None:intergenic
AAAACATATGCTCTCAAGCA+CGG 0.589815 4_4:-4268879 None:intergenic
AATAACAAGGTATACTAGCA+AGG 0.590541 4_4:+4268841 Msa0664970:CDS
ACGGATTGTTTGCTCCGTGG+TGG 0.592208 4_4:+4268789 Msa0664970:CDS
GGAAAATGTGGATGCTGTCA+AGG 0.594676 4_4:+4268169 Msa0664970:CDS
CAAACAAGAGCATTGTGAAG+AGG 0.598923 4_4:-4266947 None:intergenic
TCAACGGATTGTTTGCTCCG+TGG 0.599214 4_4:+4268786 Msa0664970:CDS
ATGGGTGGAGCATGATCCAA+TGG 0.600525 4_4:+4266778 Msa0664970:CDS
AAACCTGAGTCTGCATCAAG+AGG 0.602107 4_4:-4269006 None:intergenic
GGAGATATTGGAGAGTGTGA+AGG 0.603088 4_4:+4266799 Msa0664970:CDS
TATAAGCTATAGTTGACAGA+AGG 0.613391 4_4:-4268592 None:intergenic
CTCAGTTCTATCCACAAGCA+GGG 0.613869 4_4:+4265779 Msa0664970:CDS
GATGCTCGTGGGATTTGTAT+CGG 0.615161 4_4:+4268818 Msa0664970:CDS
TCTGTGGTTGATGGAAAATG+TGG 0.618354 4_4:+4268157 Msa0664970:CDS
CTATAGTTGACAGAAGGCCA+TGG 0.621798 4_4:-4268586 None:intergenic
GCATTAGAGGTAGAATCCAA+TGG 0.626496 4_4:+4268740 Msa0664970:CDS
ATTCTACTGAATACCGGCGA+AGG 0.627934 4_4:+4268548 Msa0664970:CDS
CTGGAAAAGGAGTTATCTGG+TGG 0.628620 4_4:+4268071 Msa0664970:CDS
TTGTTGATTTAACAGATGGG+TGG 0.628858 4_4:+4266763 Msa0664970:intron
GATGGATTCAATGTGGACAA+AGG 0.629833 4_4:+4266857 Msa0664970:CDS
TGTGAAGGTTTGCATTACCA+AGG 0.634692 4_4:+4266814 Msa0664970:CDS
CCAACCAATTATGCACTCGA+AGG 0.641638 4_4:+4268632 Msa0664970:CDS
TGGTGGCGTGATGATGCTCG+TGG 0.642857 4_4:+4268806 Msa0664970:CDS
GGAGTAGTTAAATCAAACCA+TGG 0.660899 4_4:+4268569 Msa0664970:CDS
GGTGGCGTGATGATGCTCGT+GGG 0.662938 4_4:+4268807 Msa0664970:CDS
ATTGTGAAGAGGAGCACCAG+TGG 0.665290 4_4:-4266936 None:intergenic
ACAAGCGTGCCGTAAAGGGG+AGG 0.668849 4_4:+4268496 Msa0664970:CDS
CGAGCATCATCACGCCACCA+CGG 0.670243 4_4:-4268803 None:intergenic
AAAAGAGGACCTGCAAACAG+AGG 0.674216 4_4:-4266987 None:intergenic
TTGATTTGGAACTTAACCGG+TGG 0.677686 4_4:+4268239 Msa0664970:CDS
GGATTTGTATCGGAATAACA+AGG 0.684634 4_4:+4268828 Msa0664970:CDS
TTAACCGGTGGAGTGAAAGG+AGG 0.687751 4_4:+4268251 Msa0664970:CDS
ATGTTTAGGTGATCAACATG+CGG 0.705152 4_4:+4268463 Msa0664970:CDS
AACAGCTGATGGATTCAATG+TGG 0.722250 4_4:+4266850 Msa0664970:CDS
TTAGAGGTAGAATCCAATGG+TGG 0.726999 4_4:+4268743 Msa0664970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATTGAAAATTTTGA+TGG + chr4_4:4265832-4265851 Msa0664970:intron 10.0%
!!! TTTTTATTGAAAATTTTGAT+GGG + chr4_4:4265833-4265852 Msa0664970:intron 10.0%
!!! TTTTTTATTGAAAATTTTGA+TGG + chr4_4:4265832-4265851 Msa0664970:intron 10.0%
!!! TTTTTATTGAAAATTTTGAT+GGG + chr4_4:4265833-4265852 Msa0664970:intron 10.0%
!! TCAATAAAAAAACAAAAAAG+AGG - chr4_4:4265823-4265842 None:intergenic 15.0%
!!! TTGTTGTGTTTTTATAATTA+TGG + chr4_4:4265857-4265876 Msa0664970:intron 15.0%
!!! TTTGTTGTATTTTGTAATTA+TGG + chr4_4:4265928-4265947 Msa0664970:intron 15.0%
!!! TATTTTGTTGAAAATATTGA+TGG + chr4_4:4266651-4266670 Msa0664970:intron 15.0%
!!! ATTTTGTTGAAAATATTGAT+GGG + chr4_4:4266652-4266671 Msa0664970:intron 15.0%
!! TTTACAATTAAAACAAAGAT+AGG - chr4_4:4266697-4266716 None:intergenic 15.0%
!!! ATTTTTATTATTCACAATGA+TGG - chr4_4:4267458-4267477 None:intergenic 15.0%
!! TCATTGTGAATAATAAAAAT+AGG + chr4_4:4267458-4267477 Msa0664970:intron 15.0%
!! TTAAAAAGTGATCAATTTAA+GGG - chr4_4:4267595-4267614 None:intergenic 15.0%
!! TTTAAAAAGTGATCAATTTA+AGG - chr4_4:4267596-4267615 None:intergenic 15.0%
!! TATTGAAAAGATAGAAAATA+TGG - chr4_4:4269080-4269099 None:intergenic 15.0%
!!! TTATTTTTTCAAGTAAAGAA+AGG - chr4_4:4269218-4269237 None:intergenic 15.0%
!! AAAGAGAAAAAGAAAAATAA+GGG + chr4_4:4269365-4269384 Msa0664970:intron 15.0%
!!! AAAATTTTTGTTGATAATGT+TGG + chr4_4:4269500-4269519 Msa0664970:intron 15.0%
!!! AAATTTTTGTTGATAATGTT+GGG + chr4_4:4269501-4269520 Msa0664970:intron 15.0%
!! ATATTTATTCCTTTCATTAA+AGG - chr4_4:4269856-4269875 None:intergenic 15.0%
!! TCAATAAAAAAACAAAAAAG+AGG - chr4_4:4265823-4265842 None:intergenic 15.0%
!!! TTGTTGTGTTTTTATAATTA+TGG + chr4_4:4265857-4265876 Msa0664970:intron 15.0%
!!! TTTGTTGTATTTTGTAATTA+TGG + chr4_4:4265928-4265947 Msa0664970:intron 15.0%
!!! TATTTTGTTGAAAATATTGA+TGG + chr4_4:4266651-4266670 Msa0664970:intron 15.0%
!!! ATTTTGTTGAAAATATTGAT+GGG + chr4_4:4266652-4266671 Msa0664970:intron 15.0%
!! TTTACAATTAAAACAAAGAT+AGG - chr4_4:4266697-4266716 None:intergenic 15.0%
!!! ATTTTTATTATTCACAATGA+TGG - chr4_4:4267458-4267477 None:intergenic 15.0%
!! TCATTGTGAATAATAAAAAT+AGG + chr4_4:4267458-4267477 Msa0664970:intron 15.0%
!! TTAAAAAGTGATCAATTTAA+GGG - chr4_4:4267595-4267614 None:intergenic 15.0%
!! TTTAAAAAGTGATCAATTTA+AGG - chr4_4:4267596-4267615 None:intergenic 15.0%
!! TATTGAAAAGATAGAAAATA+TGG - chr4_4:4269080-4269099 None:intergenic 15.0%
!!! TTATTTTTTCAAGTAAAGAA+AGG - chr4_4:4269218-4269237 None:intergenic 15.0%
!! AAAGAGAAAAAGAAAAATAA+GGG + chr4_4:4269365-4269384 Msa0664970:intron 15.0%
!!! AAAATTTTTGTTGATAATGT+TGG + chr4_4:4269500-4269519 Msa0664970:intron 15.0%
!!! AAATTTTTGTTGATAATGTT+GGG + chr4_4:4269501-4269520 Msa0664970:intron 15.0%
!! ATATTTATTCCTTTCATTAA+AGG - chr4_4:4269856-4269875 None:intergenic 15.0%
!!! ATATTTGATGATTGAATTTG+TGG - chr4_4:4265586-4265605 None:intergenic 20.0%
!!! TTTTTGATTGCAAATTTTGA+TGG + chr4_4:4265987-4266006 Msa0664970:intron 20.0%
!!! TTTTGATTGCAAATTTTGAT+GGG + chr4_4:4265988-4266007 Msa0664970:intron 20.0%
!! TTGTAAATCTGATACATTAA+TGG - chr4_4:4266267-4266286 None:intergenic 20.0%
!! TTGACAATAATTTGAGAAAA+TGG + chr4_4:4267121-4267140 Msa0664970:intron 20.0%
!! CTTCAAATTAAATATGTATC+CGG - chr4_4:4267179-4267198 None:intergenic 20.0%
!!! TTTGAATCTTGTTTGATTAT+GGG + chr4_4:4267485-4267504 Msa0664970:intron 20.0%
!!! TATTAGTGAATATTTTTCCT+TGG - chr4_4:4267755-4267774 None:intergenic 20.0%
!! ATGATCTATATAATGAAATC+AGG - chr4_4:4267822-4267841 None:intergenic 20.0%
!!! GATGTTATTATTTTTGAAAC+AGG + chr4_4:4268045-4268064 Msa0664970:intron 20.0%
!!! TCTGAATTACTGATAATTTT+AGG - chr4_4:4268389-4268408 None:intergenic 20.0%
!! ATCAGTAATTCAGAAATTAT+AGG + chr4_4:4268395-4268414 Msa0664970:CDS 20.0%
!! TGTTATATATACCAATATCA+AGG + chr4_4:4269262-4269281 Msa0664970:intron 20.0%
!! GTTATATATACCAATATCAA+GGG + chr4_4:4269263-4269282 Msa0664970:intron 20.0%
!!! TACAAAATAGTCTTAATAGA+GGG - chr4_4:4269318-4269337 None:intergenic 20.0%
!!! ATACAAAATAGTCTTAATAG+AGG - chr4_4:4269319-4269338 None:intergenic 20.0%
!!! TTTTCTTTTTCTCTTTGATT+GGG - chr4_4:4269361-4269380 None:intergenic 20.0%
!!! TTTTTCTTTTTCTCTTTGAT+TGG - chr4_4:4269362-4269381 None:intergenic 20.0%
!! CAAAGAGAAAAAGAAAAATA+AGG + chr4_4:4269364-4269383 Msa0664970:intron 20.0%
!!! ACACATTTTTATTTTAGCAT+TGG + chr4_4:4269828-4269847 Msa0664970:three_prime_UTR 20.0%
!!! ATATTTGATGATTGAATTTG+TGG - chr4_4:4265586-4265605 None:intergenic 20.0%
!!! TTTTTGATTGCAAATTTTGA+TGG + chr4_4:4265987-4266006 Msa0664970:intron 20.0%
!!! TTTTGATTGCAAATTTTGAT+GGG + chr4_4:4265988-4266007 Msa0664970:intron 20.0%
!! TTGTAAATCTGATACATTAA+TGG - chr4_4:4266267-4266286 None:intergenic 20.0%
!! TTGACAATAATTTGAGAAAA+TGG + chr4_4:4267121-4267140 Msa0664970:intron 20.0%
!! CTTCAAATTAAATATGTATC+CGG - chr4_4:4267179-4267198 None:intergenic 20.0%
!!! TTTGAATCTTGTTTGATTAT+GGG + chr4_4:4267485-4267504 Msa0664970:intron 20.0%
!!! TATTAGTGAATATTTTTCCT+TGG - chr4_4:4267755-4267774 None:intergenic 20.0%
!! ATGATCTATATAATGAAATC+AGG - chr4_4:4267822-4267841 None:intergenic 20.0%
!!! GATGTTATTATTTTTGAAAC+AGG + chr4_4:4268045-4268064 Msa0664970:intron 20.0%
!!! TCTGAATTACTGATAATTTT+AGG - chr4_4:4268389-4268408 None:intergenic 20.0%
!! ATCAGTAATTCAGAAATTAT+AGG + chr4_4:4268395-4268414 Msa0664970:CDS 20.0%
!! TGTTATATATACCAATATCA+AGG + chr4_4:4269262-4269281 Msa0664970:intron 20.0%
!! GTTATATATACCAATATCAA+GGG + chr4_4:4269263-4269282 Msa0664970:intron 20.0%
!!! TACAAAATAGTCTTAATAGA+GGG - chr4_4:4269318-4269337 None:intergenic 20.0%
!!! ATACAAAATAGTCTTAATAG+AGG - chr4_4:4269319-4269338 None:intergenic 20.0%
!!! TTTTCTTTTTCTCTTTGATT+GGG - chr4_4:4269361-4269380 None:intergenic 20.0%
!!! TTTTTCTTTTTCTCTTTGAT+TGG - chr4_4:4269362-4269381 None:intergenic 20.0%
!! CAAAGAGAAAAAGAAAAATA+AGG + chr4_4:4269364-4269383 Msa0664970:intron 20.0%
!!! ACACATTTTTATTTTAGCAT+TGG + chr4_4:4269828-4269847 Msa0664970:three_prime_UTR 20.0%
! TTTACGACAAAAACAAACAT+GGG - chr4_4:4265960-4265979 None:intergenic 25.0%
! TAAATTTGTCTTTCAGTAGT+CGG + chr4_4:4266119-4266138 Msa0664970:intron 25.0%
!! AACTATCGAAAGACAAATTT+TGG - chr4_4:4266315-4266334 None:intergenic 25.0%
!!! CTTTTGTTGAAAATTTTGAC+TGG + chr4_4:4266725-4266744 Msa0664970:intron 25.0%
!!! TTGTTTGTTGATTTAACAGA+TGG + chr4_4:4266759-4266778 Msa0664970:intron 25.0%
!!! TGTTTGTTGATTTAACAGAT+GGG + chr4_4:4266760-4266779 Msa0664970:intron 25.0%
! AGTAAGAAGAAGAATAAAAG+AGG - chr4_4:4267005-4267024 None:intergenic 25.0%
! TTGATTTCTTGTAAGCAAAA+AGG + chr4_4:4267223-4267242 Msa0664970:intron 25.0%
!! GTTTGAATCTTGTTTGATTA+TGG + chr4_4:4267484-4267503 Msa0664970:intron 25.0%
! TTTATCCAAACATAGAGAAT+GGG - chr4_4:4267549-4267568 None:intergenic 25.0%
! ATTTATCCAAACATAGAGAA+TGG - chr4_4:4267550-4267569 None:intergenic 25.0%
! TTTATAGGTATGCTTAATCT+AGG + chr4_4:4267685-4267704 Msa0664970:intron 25.0%
! TGATACTCTCTTTATCTATA+AGG - chr4_4:4267730-4267749 None:intergenic 25.0%
!!! TTATAGATAAAGAGAGTATC+AGG + chr4_4:4267729-4267748 Msa0664970:intron 25.0%
! TCTATATAATGAAATCAGGA+GGG - chr4_4:4267818-4267837 None:intergenic 25.0%
! ATCTATATAATGAAATCAGG+AGG - chr4_4:4267819-4267838 None:intergenic 25.0%
! AAGAAAAAAGATGCATTGTT+TGG + chr4_4:4268200-4268219 Msa0664970:CDS 25.0%
! TACAAATGCTAAAGATATAG+AGG + chr4_4:4268712-4268731 Msa0664970:CDS 25.0%
! GAAAATATGGAACTAAATGA+AGG - chr4_4:4269067-4269086 None:intergenic 25.0%
! AATATTGTTTAGCATAACCT+GGG + chr4_4:4269096-4269115 Msa0664970:intron 25.0%
! CAGAAAATGTTTATCTTGAT+AGG + chr4_4:4269435-4269454 Msa0664970:intron 25.0%
!!! TAGGTTGATACATATAAACT+TGG + chr4_4:4269454-4269473 Msa0664970:intron 25.0%
! GAAAAAGAAAGTAGATTGTT+GGG + chr4_4:4269703-4269722 Msa0664970:CDS 25.0%
! AAAAAGAAAGTAGATTGTTG+GGG + chr4_4:4269704-4269723 Msa0664970:CDS 25.0%
! TTTACGACAAAAACAAACAT+GGG - chr4_4:4265960-4265979 None:intergenic 25.0%
! TAAATTTGTCTTTCAGTAGT+CGG + chr4_4:4266119-4266138 Msa0664970:intron 25.0%
!! AACTATCGAAAGACAAATTT+TGG - chr4_4:4266315-4266334 None:intergenic 25.0%
!!! CTTTTGTTGAAAATTTTGAC+TGG + chr4_4:4266725-4266744 Msa0664970:intron 25.0%
!!! TTGTTTGTTGATTTAACAGA+TGG + chr4_4:4266759-4266778 Msa0664970:intron 25.0%
!!! TGTTTGTTGATTTAACAGAT+GGG + chr4_4:4266760-4266779 Msa0664970:intron 25.0%
! AGTAAGAAGAAGAATAAAAG+AGG - chr4_4:4267005-4267024 None:intergenic 25.0%
! TTGATTTCTTGTAAGCAAAA+AGG + chr4_4:4267223-4267242 Msa0664970:intron 25.0%
!! GTTTGAATCTTGTTTGATTA+TGG + chr4_4:4267484-4267503 Msa0664970:intron 25.0%
! TTTATCCAAACATAGAGAAT+GGG - chr4_4:4267549-4267568 None:intergenic 25.0%
! ATTTATCCAAACATAGAGAA+TGG - chr4_4:4267550-4267569 None:intergenic 25.0%
! TTTATAGGTATGCTTAATCT+AGG + chr4_4:4267685-4267704 Msa0664970:intron 25.0%
! TGATACTCTCTTTATCTATA+AGG - chr4_4:4267730-4267749 None:intergenic 25.0%
!!! TTATAGATAAAGAGAGTATC+AGG + chr4_4:4267729-4267748 Msa0664970:intron 25.0%
! TCTATATAATGAAATCAGGA+GGG - chr4_4:4267818-4267837 None:intergenic 25.0%
! ATCTATATAATGAAATCAGG+AGG - chr4_4:4267819-4267838 None:intergenic 25.0%
! AAGAAAAAAGATGCATTGTT+TGG + chr4_4:4268200-4268219 Msa0664970:CDS 25.0%
! TACAAATGCTAAAGATATAG+AGG + chr4_4:4268712-4268731 Msa0664970:CDS 25.0%
! GAAAATATGGAACTAAATGA+AGG - chr4_4:4269067-4269086 None:intergenic 25.0%
! AATATTGTTTAGCATAACCT+GGG + chr4_4:4269096-4269115 Msa0664970:intron 25.0%
! CAGAAAATGTTTATCTTGAT+AGG + chr4_4:4269435-4269454 Msa0664970:intron 25.0%
!!! TAGGTTGATACATATAAACT+TGG + chr4_4:4269454-4269473 Msa0664970:intron 25.0%
! GAAAAAGAAAGTAGATTGTT+GGG + chr4_4:4269703-4269722 Msa0664970:CDS 25.0%
! AAAAAGAAAGTAGATTGTTG+GGG + chr4_4:4269704-4269723 Msa0664970:CDS 25.0%
! TCGAAAGAAGATGTTTTCAT+TGG + chr4_4:4265670-4265689 Msa0664970:CDS 30.0%
GATAAATCAGCTAAACCAAT+TGG + chr4_4:4265736-4265755 Msa0664970:CDS 30.0%
TTACGACAAAAACAAACATG+GGG - chr4_4:4265959-4265978 None:intergenic 30.0%
CTTTACGACAAAAACAAACA+TGG - chr4_4:4265961-4265980 None:intergenic 30.0%
!!! CACTCCATTTTTGTTTTCAT+TGG + chr4_4:4266027-4266046 Msa0664970:intron 30.0%
CACTCCAATGAAAACAAAAA+TGG - chr4_4:4266034-4266053 None:intergenic 30.0%
!! TTTTGATTCTTGAATGTGTG+AGG + chr4_4:4266062-4266081 Msa0664970:intron 30.0%
TTAGGCATGTTTACATTCAT+GGG - chr4_4:4266102-4266121 None:intergenic 30.0%
TTTAGGCATGTTTACATTCA+TGG - chr4_4:4266103-4266122 None:intergenic 30.0%
GACTACTGAAAGACAAATTT+AGG - chr4_4:4266120-4266139 None:intergenic 30.0%
ACACTAACAAAACACATTTG+AGG - chr4_4:4266151-4266170 None:intergenic 30.0%
!!! CTTATGGATTTTGTTTTCGT+TGG + chr4_4:4266191-4266210 Msa0664970:intron 30.0%
AATTACATACGCATCTTCAA+GGG - chr4_4:4266390-4266409 None:intergenic 30.0%
AAATTACATACGCATCTTCA+AGG - chr4_4:4266391-4266410 None:intergenic 30.0%
GTAATCCAATTGATACATTC+AGG + chr4_4:4266572-4266591 Msa0664970:intron 30.0%
ATAGTCCTGAATGTATCAAT+TGG - chr4_4:4266580-4266599 None:intergenic 30.0%
! TGTTGAAAATATTGATGGGT+CGG + chr4_4:4266656-4266675 Msa0664970:intron 30.0%
CTCAAATGAAACATCAATTC+AGG - chr4_4:4267031-4267050 None:intergenic 30.0%
ATGTTTCATTTGAGTAAACG+AGG + chr4_4:4267037-4267056 Msa0664970:intron 30.0%
ATATGACCATTGTAGGAAAT+GGG + chr4_4:4267253-4267272 Msa0664970:intron 30.0%
! AAAAGAAGATTGTGTTGCTA+GGG - chr4_4:4267512-4267531 None:intergenic 30.0%
! TAAAAGAAGATTGTGTTGCT+AGG - chr4_4:4267513-4267532 None:intergenic 30.0%
!! TTTTAAAGAACACATTGACG+TGG + chr4_4:4267609-4267628 Msa0664970:intron 30.0%
!! ATGAACTCATCGTTTTAATG+TGG + chr4_4:4267857-4267876 Msa0664970:intron 30.0%
!!! AATTCTGTTTTTGAGGGATA+AGG + chr4_4:4267884-4267903 Msa0664970:intron 30.0%
TAACATCAAAAGCTTAGCAT+TGG - chr4_4:4267956-4267975 None:intergenic 30.0%
TAACATCAACAACATTTCTG+AGG - chr4_4:4268032-4268051 None:intergenic 30.0%
!!! TTATTTTTGAAACAGGAGAC+TGG + chr4_4:4268052-4268071 Msa0664970:intron 30.0%
! TTTTAGGCAAAATTTCAGCT+GGG - chr4_4:4268373-4268392 None:intergenic 30.0%
! ATTTTAGGCAAAATTTCAGC+TGG - chr4_4:4268374-4268393 None:intergenic 30.0%
ATTATAGGCAATGTTTCTTC+TGG + chr4_4:4268410-4268429 Msa0664970:CDS 30.0%
TATAAGCTATAGTTGACAGA+AGG - chr4_4:4268595-4268614 None:intergenic 30.0%
TCAACTATAGCTTATAAGCT+TGG + chr4_4:4268599-4268618 Msa0664970:CDS 30.0%
AATAACAAGGTATACTAGCA+AGG + chr4_4:4268841-4268860 Msa0664970:CDS 30.0%
AAGCAAAAACTCATCTTTCT+TGG - chr4_4:4268957-4268976 None:intergenic 30.0%
! AGAAAGATGAGTTTTTGCTT+AGG + chr4_4:4268957-4268976 Msa0664970:CDS 30.0%
! GAAAGATGAGTTTTTGCTTA+GGG + chr4_4:4268958-4268977 Msa0664970:CDS 30.0%
CAATATTGTTTAGCATAACC+TGG + chr4_4:4269095-4269114 Msa0664970:intron 30.0%
TTAAGCTTGTAATCCAAACA+AGG - chr4_4:4269122-4269141 None:intergenic 30.0%
AAATTGGTTACACCAAAAGT+TGG - chr4_4:4269293-4269312 None:intergenic 30.0%
GTCTTAATAGAGGGTAAAAT+TGG - chr4_4:4269309-4269328 None:intergenic 30.0%
! CTATTTTCTTCAACCATTAG+AGG - chr4_4:4269683-4269702 None:intergenic 30.0%
CTCTAATGGTTGAAGAAAAT+AGG + chr4_4:4269681-4269700 Msa0664970:CDS 30.0%
GGAAAAAGAAAGTAGATTGT+TGG + chr4_4:4269702-4269721 Msa0664970:CDS 30.0%
! TTTTAATGTCATCTACTTCG+TGG + chr4_4:4269804-4269823 Msa0664970:three_prime_UTR 30.0%
CTTCATATACTTAGGAATGA+AGG - chr4_4:4269923-4269942 None:intergenic 30.0%
CTTCTGTTCTTCATATACTT+AGG - chr4_4:4269931-4269950 None:intergenic 30.0%
! TCGAAAGAAGATGTTTTCAT+TGG + chr4_4:4265670-4265689 Msa0664970:CDS 30.0%
GATAAATCAGCTAAACCAAT+TGG + chr4_4:4265736-4265755 Msa0664970:CDS 30.0%
TTACGACAAAAACAAACATG+GGG - chr4_4:4265959-4265978 None:intergenic 30.0%
CTTTACGACAAAAACAAACA+TGG - chr4_4:4265961-4265980 None:intergenic 30.0%
!!! CACTCCATTTTTGTTTTCAT+TGG + chr4_4:4266027-4266046 Msa0664970:intron 30.0%
CACTCCAATGAAAACAAAAA+TGG - chr4_4:4266034-4266053 None:intergenic 30.0%
!! TTTTGATTCTTGAATGTGTG+AGG + chr4_4:4266062-4266081 Msa0664970:intron 30.0%
TTAGGCATGTTTACATTCAT+GGG - chr4_4:4266102-4266121 None:intergenic 30.0%
TTTAGGCATGTTTACATTCA+TGG - chr4_4:4266103-4266122 None:intergenic 30.0%
GACTACTGAAAGACAAATTT+AGG - chr4_4:4266120-4266139 None:intergenic 30.0%
ACACTAACAAAACACATTTG+AGG - chr4_4:4266151-4266170 None:intergenic 30.0%
!!! CTTATGGATTTTGTTTTCGT+TGG + chr4_4:4266191-4266210 Msa0664970:intron 30.0%
AATTACATACGCATCTTCAA+GGG - chr4_4:4266390-4266409 None:intergenic 30.0%
AAATTACATACGCATCTTCA+AGG - chr4_4:4266391-4266410 None:intergenic 30.0%
GTAATCCAATTGATACATTC+AGG + chr4_4:4266572-4266591 Msa0664970:intron 30.0%
ATAGTCCTGAATGTATCAAT+TGG - chr4_4:4266580-4266599 None:intergenic 30.0%
! TGTTGAAAATATTGATGGGT+CGG + chr4_4:4266656-4266675 Msa0664970:intron 30.0%
CTCAAATGAAACATCAATTC+AGG - chr4_4:4267031-4267050 None:intergenic 30.0%
ATGTTTCATTTGAGTAAACG+AGG + chr4_4:4267037-4267056 Msa0664970:intron 30.0%
ATATGACCATTGTAGGAAAT+GGG + chr4_4:4267253-4267272 Msa0664970:intron 30.0%
! AAAAGAAGATTGTGTTGCTA+GGG - chr4_4:4267512-4267531 None:intergenic 30.0%
! TAAAAGAAGATTGTGTTGCT+AGG - chr4_4:4267513-4267532 None:intergenic 30.0%
!! TTTTAAAGAACACATTGACG+TGG + chr4_4:4267609-4267628 Msa0664970:intron 30.0%
!! ATGAACTCATCGTTTTAATG+TGG + chr4_4:4267857-4267876 Msa0664970:intron 30.0%
!!! AATTCTGTTTTTGAGGGATA+AGG + chr4_4:4267884-4267903 Msa0664970:intron 30.0%
TAACATCAAAAGCTTAGCAT+TGG - chr4_4:4267956-4267975 None:intergenic 30.0%
TAACATCAACAACATTTCTG+AGG - chr4_4:4268032-4268051 None:intergenic 30.0%
!!! TTATTTTTGAAACAGGAGAC+TGG + chr4_4:4268052-4268071 Msa0664970:intron 30.0%
! TTTTAGGCAAAATTTCAGCT+GGG - chr4_4:4268373-4268392 None:intergenic 30.0%
! ATTTTAGGCAAAATTTCAGC+TGG - chr4_4:4268374-4268393 None:intergenic 30.0%
ATTATAGGCAATGTTTCTTC+TGG + chr4_4:4268410-4268429 Msa0664970:CDS 30.0%
TATAAGCTATAGTTGACAGA+AGG - chr4_4:4268595-4268614 None:intergenic 30.0%
TCAACTATAGCTTATAAGCT+TGG + chr4_4:4268599-4268618 Msa0664970:CDS 30.0%
AATAACAAGGTATACTAGCA+AGG + chr4_4:4268841-4268860 Msa0664970:CDS 30.0%
AAGCAAAAACTCATCTTTCT+TGG - chr4_4:4268957-4268976 None:intergenic 30.0%
! AGAAAGATGAGTTTTTGCTT+AGG + chr4_4:4268957-4268976 Msa0664970:CDS 30.0%
! GAAAGATGAGTTTTTGCTTA+GGG + chr4_4:4268958-4268977 Msa0664970:CDS 30.0%
CAATATTGTTTAGCATAACC+TGG + chr4_4:4269095-4269114 Msa0664970:intron 30.0%
TTAAGCTTGTAATCCAAACA+AGG - chr4_4:4269122-4269141 None:intergenic 30.0%
AAATTGGTTACACCAAAAGT+TGG - chr4_4:4269293-4269312 None:intergenic 30.0%
GTCTTAATAGAGGGTAAAAT+TGG - chr4_4:4269309-4269328 None:intergenic 30.0%
! CTATTTTCTTCAACCATTAG+AGG - chr4_4:4269683-4269702 None:intergenic 30.0%
CTCTAATGGTTGAAGAAAAT+AGG + chr4_4:4269681-4269700 Msa0664970:CDS 30.0%
GGAAAAAGAAAGTAGATTGT+TGG + chr4_4:4269702-4269721 Msa0664970:CDS 30.0%
! TTTTAATGTCATCTACTTCG+TGG + chr4_4:4269804-4269823 Msa0664970:three_prime_UTR 30.0%
CTTCATATACTTAGGAATGA+AGG - chr4_4:4269923-4269942 None:intergenic 30.0%
CTTCTGTTCTTCATATACTT+AGG - chr4_4:4269931-4269950 None:intergenic 30.0%
TCAACTTGATGAGATCCAAT+TGG - chr4_4:4265754-4265773 None:intergenic 35.0%
ATTCATAATTACCCTGCTTG+TGG - chr4_4:4265793-4265812 None:intergenic 35.0%
TACGACAAAAACAAACATGG+GGG - chr4_4:4265958-4265977 None:intergenic 35.0%
!! GATTGCAAATTTTGATGGGT+TGG + chr4_4:4265992-4266011 Msa0664970:intron 35.0%
!!! TTTTGATGGGTTGGTAAGTA+TGG + chr4_4:4266001-4266020 Msa0664970:intron 35.0%
TAGTGTAAAAGAGACACTTG+AGG + chr4_4:4266165-4266184 Msa0664970:intron 35.0%
!! TTTTGATTCTTGAATGCGTG+AGG + chr4_4:4266226-4266245 Msa0664970:intron 35.0%
TCCTTGAATGTGTCTATTGT+TGG + chr4_4:4266342-4266361 Msa0664970:intron 35.0%
ACCAACAATAGACACATTCA+AGG - chr4_4:4266346-4266365 None:intergenic 35.0%
! GTGTCTATTGTTGGTTAGTT+CGG + chr4_4:4266351-4266370 Msa0664970:intron 35.0%
!!! ATCTTCAAGGGTGTCTTTTA+TGG - chr4_4:4266378-4266397 None:intergenic 35.0%
CAACTGCAGTGTTTAAACAT+CGG - chr4_4:4266443-4266462 None:intergenic 35.0%
GCGGTTAAAATCAATATCTG+TGG + chr4_4:4266540-4266559 Msa0664970:intron 35.0%
! TATTGATGGGTCGGTAATTA+TGG + chr4_4:4266665-4266684 Msa0664970:intron 35.0%
!! TTGTTGATTTAACAGATGGG+TGG + chr4_4:4266763-4266782 Msa0664970:intron 35.0%
GACAAAGGATTGAAAGCTAT+TGG + chr4_4:4266872-4266891 Msa0664970:CDS 35.0%
AAGAGTAGTCTCTCTTTGAT+TGG - chr4_4:4266903-4266922 None:intergenic 35.0%
AAAGAGAGACTACTCTTGTT+TGG + chr4_4:4266906-4266925 Msa0664970:CDS 35.0%
GTAAACGAGGACAATTCATT+TGG + chr4_4:4267050-4267069 Msa0664970:intron 35.0%
ACATACACTGACAACAAACA+CGG + chr4_4:4267096-4267115 Msa0664970:intron 35.0%
CATGTACATATGACCATTGT+AGG + chr4_4:4267246-4267265 Msa0664970:intron 35.0%
CATATGACCATTGTAGGAAA+TGG + chr4_4:4267252-4267271 Msa0664970:intron 35.0%
ATAACGACTCTACTGAATGT+TGG - chr4_4:4267289-4267308 None:intergenic 35.0%
AGCAAGAAATCCAATCTGAA+GGG + chr4_4:4267423-4267442 Msa0664970:intron 35.0%
! ATGCTTAATCTAGGACCAAT+TGG + chr4_4:4267694-4267713 Msa0664970:intron 35.0%
! TGCTTAATCTAGGACCAATT+GGG + chr4_4:4267695-4267714 Msa0664970:intron 35.0%
TCTTTATCTATAAGGCACGT+TGG - chr4_4:4267722-4267741 None:intergenic 35.0%
!! AACTCATCGTTTTAATGTGG+TGG + chr4_4:4267860-4267879 Msa0664970:intron 35.0%
!!! TGGTGGTAATTCTGTTTTTG+AGG + chr4_4:4267877-4267896 Msa0664970:intron 35.0%
!!! GGTGGTAATTCTGTTTTTGA+GGG + chr4_4:4267878-4267897 Msa0664970:intron 35.0%
! AGCTTTTGATGTTAGTTCCA+TGG + chr4_4:4267962-4267981 Msa0664970:intron 35.0%
GTTAGTTCCATGGTTGAAAT+TGG + chr4_4:4267972-4267991 Msa0664970:intron 35.0%
TAGTTCACCAATTTCAACCA+TGG - chr4_4:4267982-4268001 None:intergenic 35.0%
AGGATGACAAAAAGCAACAA+AGG - chr4_4:4268012-4268031 None:intergenic 35.0%
GCACTGAAATATGTGCTAAT+AGG - chr4_4:4268128-4268147 None:intergenic 35.0%
! TTTGAAACTTCTGTGGTTGA+TGG + chr4_4:4268148-4268167 Msa0664970:CDS 35.0%
! TGTTTGGAACAATAGACACT+TGG + chr4_4:4268216-4268235 Msa0664970:CDS 35.0%
CAATAGACACTTGGTTGATT+TGG + chr4_4:4268225-4268244 Msa0664970:CDS 35.0%
!! TGGTTGATTTGGAACTTAAC+CGG + chr4_4:4268236-4268255 Msa0664970:CDS 35.0%
TTAGGTTCATCAGCATTGTT+CGG - chr4_4:4268307-4268326 None:intergenic 35.0%
ATGTTTAGGTGATCAACATG+CGG + chr4_4:4268463-4268482 Msa0664970:CDS 35.0%
GCTTTCATTCTACTGAATAC+CGG + chr4_4:4268542-4268561 Msa0664970:CDS 35.0%
GGAGTAGTTAAATCAAACCA+TGG + chr4_4:4268569-4268588 Msa0664970:CDS 35.0%
GGATTTGTATCGGAATAACA+AGG + chr4_4:4268828-4268847 Msa0664970:CDS 35.0%
AAAACATATGCTCTCAAGCA+CGG - chr4_4:4268882-4268901 None:intergenic 35.0%
GATTCAATGCACAAAGATTC+TGG + chr4_4:4268920-4268939 Msa0664970:CDS 35.0%
GTATGTAGATAAGCTCACAA+AGG + chr4_4:4269184-4269203 Msa0664970:intron 35.0%
! AGTTGGTATTCCCTTGATAT+TGG - chr4_4:4269276-4269295 None:intergenic 35.0%
! ATCAAGGGAATACCAACTTT+TGG + chr4_4:4269278-4269297 Msa0664970:intron 35.0%
CTCTTTGATTGGGTAAAGAA+GGG - chr4_4:4269351-4269370 None:intergenic 35.0%
TCTCTTTGATTGGGTAAAGA+AGG - chr4_4:4269352-4269371 None:intergenic 35.0%
!!! TTTTGTTGATAATGTTGGGC+AGG + chr4_4:4269505-4269524 Msa0664970:intron 35.0%
!! AGATTTCGTTTTCGATTCGA+AGG + chr4_4:4269628-4269647 Msa0664970:CDS 35.0%
TTTCTTCAACCATTAGAGGA+CGG - chr4_4:4269679-4269698 None:intergenic 35.0%
!! GCATTGGTTCCTTTAATGAA+AGG + chr4_4:4269844-4269863 Msa0664970:three_prime_UTR 35.0%
TCAACTTGATGAGATCCAAT+TGG - chr4_4:4265754-4265773 None:intergenic 35.0%
ATTCATAATTACCCTGCTTG+TGG - chr4_4:4265793-4265812 None:intergenic 35.0%
TACGACAAAAACAAACATGG+GGG - chr4_4:4265958-4265977 None:intergenic 35.0%
!! GATTGCAAATTTTGATGGGT+TGG + chr4_4:4265992-4266011 Msa0664970:intron 35.0%
!!! TTTTGATGGGTTGGTAAGTA+TGG + chr4_4:4266001-4266020 Msa0664970:intron 35.0%
TAGTGTAAAAGAGACACTTG+AGG + chr4_4:4266165-4266184 Msa0664970:intron 35.0%
!! TTTTGATTCTTGAATGCGTG+AGG + chr4_4:4266226-4266245 Msa0664970:intron 35.0%
TCCTTGAATGTGTCTATTGT+TGG + chr4_4:4266342-4266361 Msa0664970:intron 35.0%
ACCAACAATAGACACATTCA+AGG - chr4_4:4266346-4266365 None:intergenic 35.0%
! GTGTCTATTGTTGGTTAGTT+CGG + chr4_4:4266351-4266370 Msa0664970:intron 35.0%
!!! ATCTTCAAGGGTGTCTTTTA+TGG - chr4_4:4266378-4266397 None:intergenic 35.0%
CAACTGCAGTGTTTAAACAT+CGG - chr4_4:4266443-4266462 None:intergenic 35.0%
GCGGTTAAAATCAATATCTG+TGG + chr4_4:4266540-4266559 Msa0664970:intron 35.0%
! TATTGATGGGTCGGTAATTA+TGG + chr4_4:4266665-4266684 Msa0664970:intron 35.0%
!! TTGTTGATTTAACAGATGGG+TGG + chr4_4:4266763-4266782 Msa0664970:intron 35.0%
GACAAAGGATTGAAAGCTAT+TGG + chr4_4:4266872-4266891 Msa0664970:CDS 35.0%
AAGAGTAGTCTCTCTTTGAT+TGG - chr4_4:4266903-4266922 None:intergenic 35.0%
AAAGAGAGACTACTCTTGTT+TGG + chr4_4:4266906-4266925 Msa0664970:CDS 35.0%
GTAAACGAGGACAATTCATT+TGG + chr4_4:4267050-4267069 Msa0664970:intron 35.0%
ACATACACTGACAACAAACA+CGG + chr4_4:4267096-4267115 Msa0664970:intron 35.0%
CATGTACATATGACCATTGT+AGG + chr4_4:4267246-4267265 Msa0664970:intron 35.0%
CATATGACCATTGTAGGAAA+TGG + chr4_4:4267252-4267271 Msa0664970:intron 35.0%
ATAACGACTCTACTGAATGT+TGG - chr4_4:4267289-4267308 None:intergenic 35.0%
AGCAAGAAATCCAATCTGAA+GGG + chr4_4:4267423-4267442 Msa0664970:intron 35.0%
! ATGCTTAATCTAGGACCAAT+TGG + chr4_4:4267694-4267713 Msa0664970:intron 35.0%
! TGCTTAATCTAGGACCAATT+GGG + chr4_4:4267695-4267714 Msa0664970:intron 35.0%
TCTTTATCTATAAGGCACGT+TGG - chr4_4:4267722-4267741 None:intergenic 35.0%
!! AACTCATCGTTTTAATGTGG+TGG + chr4_4:4267860-4267879 Msa0664970:intron 35.0%
!!! TGGTGGTAATTCTGTTTTTG+AGG + chr4_4:4267877-4267896 Msa0664970:intron 35.0%
!!! GGTGGTAATTCTGTTTTTGA+GGG + chr4_4:4267878-4267897 Msa0664970:intron 35.0%
! AGCTTTTGATGTTAGTTCCA+TGG + chr4_4:4267962-4267981 Msa0664970:intron 35.0%
GTTAGTTCCATGGTTGAAAT+TGG + chr4_4:4267972-4267991 Msa0664970:intron 35.0%
TAGTTCACCAATTTCAACCA+TGG - chr4_4:4267982-4268001 None:intergenic 35.0%
AGGATGACAAAAAGCAACAA+AGG - chr4_4:4268012-4268031 None:intergenic 35.0%
GCACTGAAATATGTGCTAAT+AGG - chr4_4:4268128-4268147 None:intergenic 35.0%
! TTTGAAACTTCTGTGGTTGA+TGG + chr4_4:4268148-4268167 Msa0664970:CDS 35.0%
! TGTTTGGAACAATAGACACT+TGG + chr4_4:4268216-4268235 Msa0664970:CDS 35.0%
CAATAGACACTTGGTTGATT+TGG + chr4_4:4268225-4268244 Msa0664970:CDS 35.0%
!! TGGTTGATTTGGAACTTAAC+CGG + chr4_4:4268236-4268255 Msa0664970:CDS 35.0%
TTAGGTTCATCAGCATTGTT+CGG - chr4_4:4268307-4268326 None:intergenic 35.0%
ATGTTTAGGTGATCAACATG+CGG + chr4_4:4268463-4268482 Msa0664970:CDS 35.0%
GCTTTCATTCTACTGAATAC+CGG + chr4_4:4268542-4268561 Msa0664970:CDS 35.0%
GGAGTAGTTAAATCAAACCA+TGG + chr4_4:4268569-4268588 Msa0664970:CDS 35.0%
GGATTTGTATCGGAATAACA+AGG + chr4_4:4268828-4268847 Msa0664970:CDS 35.0%
AAAACATATGCTCTCAAGCA+CGG - chr4_4:4268882-4268901 None:intergenic 35.0%
GATTCAATGCACAAAGATTC+TGG + chr4_4:4268920-4268939 Msa0664970:CDS 35.0%
GTATGTAGATAAGCTCACAA+AGG + chr4_4:4269184-4269203 Msa0664970:intron 35.0%
! AGTTGGTATTCCCTTGATAT+TGG - chr4_4:4269276-4269295 None:intergenic 35.0%
! ATCAAGGGAATACCAACTTT+TGG + chr4_4:4269278-4269297 Msa0664970:intron 35.0%
CTCTTTGATTGGGTAAAGAA+GGG - chr4_4:4269351-4269370 None:intergenic 35.0%
TCTCTTTGATTGGGTAAAGA+AGG - chr4_4:4269352-4269371 None:intergenic 35.0%
!!! TTTTGTTGATAATGTTGGGC+AGG + chr4_4:4269505-4269524 Msa0664970:intron 35.0%
!! AGATTTCGTTTTCGATTCGA+AGG + chr4_4:4269628-4269647 Msa0664970:CDS 35.0%
TTTCTTCAACCATTAGAGGA+CGG - chr4_4:4269679-4269698 None:intergenic 35.0%
!! GCATTGGTTCCTTTAATGAA+AGG + chr4_4:4269844-4269863 Msa0664970:three_prime_UTR 35.0%
TTCATTGGTGCAATTGACCA+AGG + chr4_4:4265685-4265704 Msa0664970:CDS 40.0%
ACGACAAAAACAAACATGGG+GGG - chr4_4:4265957-4265976 None:intergenic 40.0%
TGTAAAAGAGACACTTGAGG+AGG + chr4_4:4266168-4266187 Msa0664970:intron 40.0%
! ACATCGGATCTTTTACAGCA+GGG - chr4_4:4266427-4266446 None:intergenic 40.0%
! AACATCGGATCTTTTACAGC+AGG - chr4_4:4266428-4266447 None:intergenic 40.0%
!! TTCACCCATCGATTTGAGAT+TGG + chr4_4:4266465-4266484 Msa0664970:intron 40.0%
CCAACCAATCTCAAATCGAT+GGG - chr4_4:4266472-4266491 None:intergenic 40.0%
ACCAACCAATCTCAAATCGA+TGG - chr4_4:4266473-4266492 None:intergenic 40.0%
TCGATCTTGAATCAATGGTC+GGG - chr4_4:4266520-4266539 None:intergenic 40.0%
CTCGATCTTGAATCAATGGT+CGG - chr4_4:4266521-4266540 None:intergenic 40.0%
!! ACCATTGATTCAAGATCGAG+CGG + chr4_4:4266521-4266540 Msa0664970:intron 40.0%
GCATGATCCAATGGAGATAT+TGG + chr4_4:4266787-4266806 Msa0664970:CDS 40.0%
ACACTCTCCAATATCTCCAT+TGG - chr4_4:4266797-4266816 None:intergenic 40.0%
TGTGAAGGTTTGCATTACCA+AGG + chr4_4:4266814-4266833 Msa0664970:CDS 40.0%
!! AACAGCTGATGGATTCAATG+TGG + chr4_4:4266850-4266869 Msa0664970:CDS 40.0%
! GATGGATTCAATGTGGACAA+AGG + chr4_4:4266857-4266876 Msa0664970:CDS 40.0%
!! CAAACAAGAGCATTGTGAAG+AGG - chr4_4:4266950-4266969 None:intergenic 40.0%
CTCTTCACAATGCTCTTGTT+TGG + chr4_4:4266948-4266967 Msa0664970:CDS 40.0%
! TCACAATGCTCTTGTTTGGA+TGG + chr4_4:4266952-4266971 Msa0664970:CDS 40.0%
TATCCACATGTGTCAAACAC+CGG + chr4_4:4267157-4267176 Msa0664970:intron 40.0%
AAGTATCTGTGCTACATAGC+TGG + chr4_4:4267196-4267215 Msa0664970:intron 40.0%
AGTATCTGTGCTACATAGCT+GGG + chr4_4:4267197-4267216 Msa0664970:intron 40.0%
AGATCAGACAGTTGAGATTC+TGG + chr4_4:4267324-4267343 Msa0664970:intron 40.0%
GATCAGACAGTTGAGATTCT+GGG + chr4_4:4267325-4267344 Msa0664970:intron 40.0%
ATCGTCTGATCTCTATCCAA+TGG + chr4_4:4267376-4267395 Msa0664970:intron 40.0%
CAGCAAGAAATCCAATCTGA+AGG + chr4_4:4267422-4267441 Msa0664970:intron 40.0%
AATCCAATCTGAAGGGAATC+TGG + chr4_4:4267430-4267449 Msa0664970:intron 40.0%
ATCCAATCTGAAGGGAATCT+GGG + chr4_4:4267431-4267450 Msa0664970:intron 40.0%
CTTTGCCCATTCTCTATGTT+TGG + chr4_4:4267541-4267560 Msa0664970:intron 40.0%
CATTGACGTGGTGAAAAAGA+AGG + chr4_4:4267621-4267640 Msa0664970:intron 40.0%
!! ATAAAGAGAGTATCAGGCCA+AGG + chr4_4:4267735-4267754 Msa0664970:intron 40.0%
TTGAAACAGGAGACTGGAAA+AGG + chr4_4:4268058-4268077 Msa0664970:intron 40.0%
AGACTGGAAAAGGAGTTATC+TGG + chr4_4:4268068-4268087 Msa0664970:CDS 40.0%
! ACACATTTTGTAGAGAGCTG+TGG + chr4_4:4268098-4268117 Msa0664970:CDS 40.0%
!! TCAGTGCTTTGAAACTTCTG+TGG + chr4_4:4268141-4268160 Msa0664970:CDS 40.0%
!! TCTGTGGTTGATGGAAAATG+TGG + chr4_4:4268157-4268176 Msa0664970:CDS 40.0%
!! TTGATTTGGAACTTAACCGG+TGG + chr4_4:4268239-4268258 Msa0664970:CDS 40.0%
TAGGTTCATCAGCATTGTTC+GGG - chr4_4:4268306-4268325 None:intergenic 40.0%
TGAACCTAAAAACCCTCAAC+TGG + chr4_4:4268318-4268337 Msa0664970:CDS 40.0%
GAACCTAAAAACCCTCAACT+GGG + chr4_4:4268319-4268338 Msa0664970:CDS 40.0%
! TGGGATTTGAAGTGCTTTCA+AGG - chr4_4:4268354-4268373 None:intergenic 40.0%
TAGGCAATGTTTCTTCTGGA+TGG + chr4_4:4268414-4268433 Msa0664970:CDS 40.0%
! TACTTTTAGCCTCCCCTTTA+CGG - chr4_4:4268508-4268527 None:intergenic 40.0%
! GCTAAAAGTACGTATGGTAC+AGG + chr4_4:4268518-4268537 Msa0664970:CDS 40.0%
TGATTTAACTACTCCTTCGC+CGG - chr4_4:4268564-4268583 None:intergenic 40.0%
! GCATAATTGGTTGGAGCATT+CGG - chr4_4:4268626-4268645 None:intergenic 40.0%
TGCTAAAGATATAGAGGCTC+TGG + chr4_4:4268718-4268737 Msa0664970:CDS 40.0%
GCATTAGAGGTAGAATCCAA+TGG + chr4_4:4268740-4268759 Msa0664970:CDS 40.0%
TTAGAGGTAGAATCCAATGG+TGG + chr4_4:4268743-4268762 Msa0664970:CDS 40.0%
AACGAAGTAAACACCACCAT+TGG - chr4_4:4268759-4268778 None:intergenic 40.0%
! GAGTTTTTGCTTAGGGTTGA+TGG + chr4_4:4268965-4268984 Msa0664970:CDS 40.0%
!!! TTTTTGCTTAGGGTTGATGG+TGG + chr4_4:4268968-4268987 Msa0664970:CDS 40.0%
GCAGACAAGTACTAACATGT+CGG - chr4_4:4269410-4269429 None:intergenic 40.0%
GACATTGAAACAACAGCACT+TGG + chr4_4:4269563-4269582 Msa0664970:CDS 40.0%
! TAGTGTTTTCCGTCCTCTAA+TGG + chr4_4:4269667-4269686 Msa0664970:CDS 40.0%
TTCATTGGTGCAATTGACCA+AGG + chr4_4:4265685-4265704 Msa0664970:CDS 40.0%
ACGACAAAAACAAACATGGG+GGG - chr4_4:4265957-4265976 None:intergenic 40.0%
TGTAAAAGAGACACTTGAGG+AGG + chr4_4:4266168-4266187 Msa0664970:intron 40.0%
! ACATCGGATCTTTTACAGCA+GGG - chr4_4:4266427-4266446 None:intergenic 40.0%
! AACATCGGATCTTTTACAGC+AGG - chr4_4:4266428-4266447 None:intergenic 40.0%
!! TTCACCCATCGATTTGAGAT+TGG + chr4_4:4266465-4266484 Msa0664970:intron 40.0%
CCAACCAATCTCAAATCGAT+GGG - chr4_4:4266472-4266491 None:intergenic 40.0%
ACCAACCAATCTCAAATCGA+TGG - chr4_4:4266473-4266492 None:intergenic 40.0%
TCGATCTTGAATCAATGGTC+GGG - chr4_4:4266520-4266539 None:intergenic 40.0%
CTCGATCTTGAATCAATGGT+CGG - chr4_4:4266521-4266540 None:intergenic 40.0%
!! ACCATTGATTCAAGATCGAG+CGG + chr4_4:4266521-4266540 Msa0664970:intron 40.0%
GCATGATCCAATGGAGATAT+TGG + chr4_4:4266787-4266806 Msa0664970:CDS 40.0%
ACACTCTCCAATATCTCCAT+TGG - chr4_4:4266797-4266816 None:intergenic 40.0%
TGTGAAGGTTTGCATTACCA+AGG + chr4_4:4266814-4266833 Msa0664970:CDS 40.0%
!! AACAGCTGATGGATTCAATG+TGG + chr4_4:4266850-4266869 Msa0664970:CDS 40.0%
! GATGGATTCAATGTGGACAA+AGG + chr4_4:4266857-4266876 Msa0664970:CDS 40.0%
!! CAAACAAGAGCATTGTGAAG+AGG - chr4_4:4266950-4266969 None:intergenic 40.0%
CTCTTCACAATGCTCTTGTT+TGG + chr4_4:4266948-4266967 Msa0664970:CDS 40.0%
! TCACAATGCTCTTGTTTGGA+TGG + chr4_4:4266952-4266971 Msa0664970:CDS 40.0%
TATCCACATGTGTCAAACAC+CGG + chr4_4:4267157-4267176 Msa0664970:intron 40.0%
AAGTATCTGTGCTACATAGC+TGG + chr4_4:4267196-4267215 Msa0664970:intron 40.0%
AGTATCTGTGCTACATAGCT+GGG + chr4_4:4267197-4267216 Msa0664970:intron 40.0%
AGATCAGACAGTTGAGATTC+TGG + chr4_4:4267324-4267343 Msa0664970:intron 40.0%
GATCAGACAGTTGAGATTCT+GGG + chr4_4:4267325-4267344 Msa0664970:intron 40.0%
ATCGTCTGATCTCTATCCAA+TGG + chr4_4:4267376-4267395 Msa0664970:intron 40.0%
CAGCAAGAAATCCAATCTGA+AGG + chr4_4:4267422-4267441 Msa0664970:intron 40.0%
AATCCAATCTGAAGGGAATC+TGG + chr4_4:4267430-4267449 Msa0664970:intron 40.0%
ATCCAATCTGAAGGGAATCT+GGG + chr4_4:4267431-4267450 Msa0664970:intron 40.0%
CTTTGCCCATTCTCTATGTT+TGG + chr4_4:4267541-4267560 Msa0664970:intron 40.0%
CATTGACGTGGTGAAAAAGA+AGG + chr4_4:4267621-4267640 Msa0664970:intron 40.0%
!! ATAAAGAGAGTATCAGGCCA+AGG + chr4_4:4267735-4267754 Msa0664970:intron 40.0%
TTGAAACAGGAGACTGGAAA+AGG + chr4_4:4268058-4268077 Msa0664970:intron 40.0%
AGACTGGAAAAGGAGTTATC+TGG + chr4_4:4268068-4268087 Msa0664970:CDS 40.0%
! ACACATTTTGTAGAGAGCTG+TGG + chr4_4:4268098-4268117 Msa0664970:CDS 40.0%
!! TCAGTGCTTTGAAACTTCTG+TGG + chr4_4:4268141-4268160 Msa0664970:CDS 40.0%
!! TCTGTGGTTGATGGAAAATG+TGG + chr4_4:4268157-4268176 Msa0664970:CDS 40.0%
!! TTGATTTGGAACTTAACCGG+TGG + chr4_4:4268239-4268258 Msa0664970:CDS 40.0%
TAGGTTCATCAGCATTGTTC+GGG - chr4_4:4268306-4268325 None:intergenic 40.0%
TGAACCTAAAAACCCTCAAC+TGG + chr4_4:4268318-4268337 Msa0664970:CDS 40.0%
GAACCTAAAAACCCTCAACT+GGG + chr4_4:4268319-4268338 Msa0664970:CDS 40.0%
! TGGGATTTGAAGTGCTTTCA+AGG - chr4_4:4268354-4268373 None:intergenic 40.0%
TAGGCAATGTTTCTTCTGGA+TGG + chr4_4:4268414-4268433 Msa0664970:CDS 40.0%
! TACTTTTAGCCTCCCCTTTA+CGG - chr4_4:4268508-4268527 None:intergenic 40.0%
! GCTAAAAGTACGTATGGTAC+AGG + chr4_4:4268518-4268537 Msa0664970:CDS 40.0%
TGATTTAACTACTCCTTCGC+CGG - chr4_4:4268564-4268583 None:intergenic 40.0%
! GCATAATTGGTTGGAGCATT+CGG - chr4_4:4268626-4268645 None:intergenic 40.0%
TGCTAAAGATATAGAGGCTC+TGG + chr4_4:4268718-4268737 Msa0664970:CDS 40.0%
GCATTAGAGGTAGAATCCAA+TGG + chr4_4:4268740-4268759 Msa0664970:CDS 40.0%
TTAGAGGTAGAATCCAATGG+TGG + chr4_4:4268743-4268762 Msa0664970:CDS 40.0%
AACGAAGTAAACACCACCAT+TGG - chr4_4:4268759-4268778 None:intergenic 40.0%
! GAGTTTTTGCTTAGGGTTGA+TGG + chr4_4:4268965-4268984 Msa0664970:CDS 40.0%
!!! TTTTTGCTTAGGGTTGATGG+TGG + chr4_4:4268968-4268987 Msa0664970:CDS 40.0%
GCAGACAAGTACTAACATGT+CGG - chr4_4:4269410-4269429 None:intergenic 40.0%
GACATTGAAACAACAGCACT+TGG + chr4_4:4269563-4269582 Msa0664970:CDS 40.0%
! TAGTGTTTTCCGTCCTCTAA+TGG + chr4_4:4269667-4269686 Msa0664970:CDS 40.0%
ATCTGCTACTGCTTGTTCCT+TGG - chr4_4:4265705-4265724 None:intergenic 45.0%
ACTCAGTTCTATCCACAAGC+AGG + chr4_4:4265778-4265797 Msa0664970:CDS 45.0%
CTCAGTTCTATCCACAAGCA+GGG + chr4_4:4265779-4265798 Msa0664970:CDS 45.0%
!! TCTTTTACAGCAGGGCATCT+AGG - chr4_4:4266419-4266438 None:intergenic 45.0%
!! CCCATCGATTTGAGATTGGT+TGG + chr4_4:4266469-4266488 Msa0664970:intron 45.0%
ACCGCTCGATCTTGAATCAA+TGG - chr4_4:4266525-4266544 None:intergenic 45.0%
! GGAGATATTGGAGAGTGTGA+AGG + chr4_4:4266799-4266818 Msa0664970:CDS 45.0%
CATTACCAAGGCAGTGGATA+AGG + chr4_4:4266826-4266845 Msa0664970:CDS 45.0%
! CTTGTTTGGAGCAAATCCAC+TGG + chr4_4:4266920-4266939 Msa0664970:CDS 45.0%
TTCGTACTACCTCTGTTTGC+AGG + chr4_4:4266978-4266997 Msa0664970:CDS 45.0%
AAAAGAGGACCTGCAAACAG+AGG - chr4_4:4266990-4267009 None:intergenic 45.0%
CGAGGACAATTCATTTGGCT+AGG + chr4_4:4267055-4267074 Msa0664970:intron 45.0%
TATCCGGTGTTTGACACATG+TGG - chr4_4:4267163-4267182 None:intergenic 45.0%
GAGGAACCCATTTCCTACAA+TGG - chr4_4:4267262-4267281 None:intergenic 45.0%
AGTCAGCGTTTCTAAGCCAT+TGG - chr4_4:4267395-4267414 None:intergenic 45.0%
! AGTCATAAAGAGCGCGTTGT+TGG + chr4_4:4267647-4267666 Msa0664970:intron 45.0%
CTGGAAAAGGAGTTATCTGG+TGG + chr4_4:4268071-4268090 Msa0664970:CDS 45.0%
GGAAAATGTGGATGCTGTCA+AGG + chr4_4:4268169-4268188 Msa0664970:CDS 45.0%
AACTTAACCGGTGGAGTGAA+AGG + chr4_4:4268248-4268267 Msa0664970:CDS 45.0%
! CATCCCAGTTGAGGGTTTTT+AGG - chr4_4:4268325-4268344 None:intergenic 45.0%
GGTAGATTCATCCCAGTTGA+GGG - chr4_4:4268333-4268352 None:intergenic 45.0%
AGGTAGATTCATCCCAGTTG+AGG - chr4_4:4268334-4268353 None:intergenic 45.0%
ATCCCAATCGCTGGATGTTT+AGG + chr4_4:4268449-4268468 Msa0664970:CDS 45.0%
CACCTAAACATCCAGCGATT+GGG - chr4_4:4268454-4268473 None:intergenic 45.0%
TCACCTAAACATCCAGCGAT+TGG - chr4_4:4268455-4268474 None:intergenic 45.0%
ATTCTACTGAATACCGGCGA+AGG + chr4_4:4268548-4268567 Msa0664970:CDS 45.0%
CTATAGTTGACAGAAGGCCA+TGG - chr4_4:4268589-4268608 None:intergenic 45.0%
CCTTCGAGTGCATAATTGGT+TGG - chr4_4:4268635-4268654 None:intergenic 45.0%
CCAACCAATTATGCACTCGA+AGG + chr4_4:4268632-4268651 Msa0664970:CDS 45.0%
GGATCCTTCGAGTGCATAAT+TGG - chr4_4:4268639-4268658 None:intergenic 45.0%
! TATAGAGGCTCTGGCATTAG+AGG + chr4_4:4268727-4268746 Msa0664970:CDS 45.0%
TACTTCGTTCCTGCCTTCAA+CGG + chr4_4:4268770-4268789 Msa0664970:CDS 45.0%
GATGCTCGTGGGATTTGTAT+CGG + chr4_4:4268818-4268837 Msa0664970:CDS 45.0%
AAACCTGAGTCTGCATCAAG+AGG - chr4_4:4269009-4269028 None:intergenic 45.0%
TCTTGATGCAGACTCAGGTT+TGG + chr4_4:4269008-4269027 Msa0664970:intron 45.0%
TTGTAATCCAAACAAGGCCC+AGG - chr4_4:4269116-4269135 None:intergenic 45.0%
!! TGTTGATAATGTTGGGCAGG+CGG + chr4_4:4269508-4269527 Msa0664970:intron 45.0%
!! GCTGTTGTTTCAATGTCAGC+TGG - chr4_4:4269560-4269579 None:intergenic 45.0%
CCAAATCCCAACAGCTAATC+CGG - chr4_4:4269603-4269622 None:intergenic 45.0%
ATCTGCTACTGCTTGTTCCT+TGG - chr4_4:4265705-4265724 None:intergenic 45.0%
ACTCAGTTCTATCCACAAGC+AGG + chr4_4:4265778-4265797 Msa0664970:CDS 45.0%
CTCAGTTCTATCCACAAGCA+GGG + chr4_4:4265779-4265798 Msa0664970:CDS 45.0%
!! TCTTTTACAGCAGGGCATCT+AGG - chr4_4:4266419-4266438 None:intergenic 45.0%
!! CCCATCGATTTGAGATTGGT+TGG + chr4_4:4266469-4266488 Msa0664970:intron 45.0%
ACCGCTCGATCTTGAATCAA+TGG - chr4_4:4266525-4266544 None:intergenic 45.0%
! GGAGATATTGGAGAGTGTGA+AGG + chr4_4:4266799-4266818 Msa0664970:CDS 45.0%
CATTACCAAGGCAGTGGATA+AGG + chr4_4:4266826-4266845 Msa0664970:CDS 45.0%
! CTTGTTTGGAGCAAATCCAC+TGG + chr4_4:4266920-4266939 Msa0664970:CDS 45.0%
TTCGTACTACCTCTGTTTGC+AGG + chr4_4:4266978-4266997 Msa0664970:CDS 45.0%
AAAAGAGGACCTGCAAACAG+AGG - chr4_4:4266990-4267009 None:intergenic 45.0%
CGAGGACAATTCATTTGGCT+AGG + chr4_4:4267055-4267074 Msa0664970:intron 45.0%
TATCCGGTGTTTGACACATG+TGG - chr4_4:4267163-4267182 None:intergenic 45.0%
GAGGAACCCATTTCCTACAA+TGG - chr4_4:4267262-4267281 None:intergenic 45.0%
AGTCAGCGTTTCTAAGCCAT+TGG - chr4_4:4267395-4267414 None:intergenic 45.0%
! AGTCATAAAGAGCGCGTTGT+TGG + chr4_4:4267647-4267666 Msa0664970:intron 45.0%
CTGGAAAAGGAGTTATCTGG+TGG + chr4_4:4268071-4268090 Msa0664970:CDS 45.0%
GGAAAATGTGGATGCTGTCA+AGG + chr4_4:4268169-4268188 Msa0664970:CDS 45.0%
AACTTAACCGGTGGAGTGAA+AGG + chr4_4:4268248-4268267 Msa0664970:CDS 45.0%
! CATCCCAGTTGAGGGTTTTT+AGG - chr4_4:4268325-4268344 None:intergenic 45.0%
GGTAGATTCATCCCAGTTGA+GGG - chr4_4:4268333-4268352 None:intergenic 45.0%
AGGTAGATTCATCCCAGTTG+AGG - chr4_4:4268334-4268353 None:intergenic 45.0%
ATCCCAATCGCTGGATGTTT+AGG + chr4_4:4268449-4268468 Msa0664970:CDS 45.0%
CACCTAAACATCCAGCGATT+GGG - chr4_4:4268454-4268473 None:intergenic 45.0%
TCACCTAAACATCCAGCGAT+TGG - chr4_4:4268455-4268474 None:intergenic 45.0%
ATTCTACTGAATACCGGCGA+AGG + chr4_4:4268548-4268567 Msa0664970:CDS 45.0%
CTATAGTTGACAGAAGGCCA+TGG - chr4_4:4268589-4268608 None:intergenic 45.0%
CCTTCGAGTGCATAATTGGT+TGG - chr4_4:4268635-4268654 None:intergenic 45.0%
CCAACCAATTATGCACTCGA+AGG + chr4_4:4268632-4268651 Msa0664970:CDS 45.0%
GGATCCTTCGAGTGCATAAT+TGG - chr4_4:4268639-4268658 None:intergenic 45.0%
! TATAGAGGCTCTGGCATTAG+AGG + chr4_4:4268727-4268746 Msa0664970:CDS 45.0%
TACTTCGTTCCTGCCTTCAA+CGG + chr4_4:4268770-4268789 Msa0664970:CDS 45.0%
GATGCTCGTGGGATTTGTAT+CGG + chr4_4:4268818-4268837 Msa0664970:CDS 45.0%
AAACCTGAGTCTGCATCAAG+AGG - chr4_4:4269009-4269028 None:intergenic 45.0%
TCTTGATGCAGACTCAGGTT+TGG + chr4_4:4269008-4269027 Msa0664970:intron 45.0%
TTGTAATCCAAACAAGGCCC+AGG - chr4_4:4269116-4269135 None:intergenic 45.0%
!! TGTTGATAATGTTGGGCAGG+CGG + chr4_4:4269508-4269527 Msa0664970:intron 45.0%
!! GCTGTTGTTTCAATGTCAGC+TGG - chr4_4:4269560-4269579 None:intergenic 45.0%
CCAAATCCCAACAGCTAATC+CGG - chr4_4:4269603-4269622 None:intergenic 45.0%
!!! TATTCATAATTTTTTTTTAT+AGG + chr4_4:4267670-4267689 Msa0664970:intron 5.0%
!!! TATTCATAATTTTTTTTTAT+AGG + chr4_4:4267670-4267689 Msa0664970:intron 5.0%
GAGACACTTGAGGAGGCTTA+TGG + chr4_4:4266175-4266194 Msa0664970:intron 50.0%
ATGGGTGGAGCATGATCCAA+TGG + chr4_4:4266778-4266797 Msa0664970:CDS 50.0%
GGTTTGCATTACCAAGGCAG+TGG + chr4_4:4266820-4266839 Msa0664970:CDS 50.0%
TGTTGCCTTATCCACTGCCT+TGG - chr4_4:4266834-4266853 None:intergenic 50.0%
GTGGATAAGGCAACAGCTGA+TGG + chr4_4:4266839-4266858 Msa0664970:CDS 50.0%
!! ATTGTGAAGAGGAGCACCAG+TGG - chr4_4:4266939-4266958 None:intergenic 50.0%
! TGTAGGAAATGGGTTCCTCG+TGG + chr4_4:4267263-4267282 Msa0664970:intron 50.0%
TCTACTGAATGTTGGCCACG+AGG - chr4_4:4267281-4267300 None:intergenic 50.0%
GACCCAGATTCCCTTCAGAT+TGG - chr4_4:4267436-4267455 None:intergenic 50.0%
TAAGGCACGTTGGACCCAAT+TGG - chr4_4:4267712-4267731 None:intergenic 50.0%
TTAACCGGTGGAGTGAAAGG+AGG + chr4_4:4268251-4268270 Msa0664970:CDS 50.0%
CAATCCTCCTTTCACTCCAC+CGG - chr4_4:4268258-4268277 None:intergenic 50.0%
GATCAACATGCGGCAATGCT+TGG + chr4_4:4268473-4268492 Msa0664970:CDS 50.0%
TTGGACAAGCGTGCCGTAAA+GGG + chr4_4:4268492-4268511 Msa0664970:CDS 50.0%
! GGGGAGGCTAAAAGTACGTA+TGG + chr4_4:4268512-4268531 Msa0664970:CDS 50.0%
! GAAGGATCCGTTGCTATTGC+TGG + chr4_4:4268650-4268669 Msa0664970:CDS 50.0%
CAGTGGCTTAGAGATGGTCT+TGG + chr4_4:4268683-4268702 Msa0664970:CDS 50.0%
GCAAACAATCCGTTGAAGGC+AGG - chr4_4:4268782-4268801 None:intergenic 50.0%
CGGAGCAAACAATCCGTTGA+AGG - chr4_4:4268786-4268805 None:intergenic 50.0%
!! TCAACGGATTGTTTGCTCCG+TGG + chr4_4:4268786-4268805 Msa0664970:CDS 50.0%
CAACCTCTTGATGCAGACTC+AGG + chr4_4:4269003-4269022 Msa0664970:CDS 50.0%
!! AGCATAACCTGGGCCTTGTT+TGG + chr4_4:4269106-4269125 Msa0664970:intron 50.0%
AACAGCTAATCCGGCTGCAT+AGG - chr4_4:4269594-4269613 None:intergenic 50.0%
!! TATGCAGCCGGATTAGCTGT+TGG + chr4_4:4269593-4269612 Msa0664970:CDS 50.0%
!! ATGCAGCCGGATTAGCTGTT+GGG + chr4_4:4269594-4269613 Msa0664970:CDS 50.0%
!! CCGGATTAGCTGTTGGGATT+TGG + chr4_4:4269600-4269619 Msa0664970:CDS 50.0%
GAGACACTTGAGGAGGCTTA+TGG + chr4_4:4266175-4266194 Msa0664970:intron 50.0%
ATGGGTGGAGCATGATCCAA+TGG + chr4_4:4266778-4266797 Msa0664970:CDS 50.0%
GGTTTGCATTACCAAGGCAG+TGG + chr4_4:4266820-4266839 Msa0664970:CDS 50.0%
TGTTGCCTTATCCACTGCCT+TGG - chr4_4:4266834-4266853 None:intergenic 50.0%
GTGGATAAGGCAACAGCTGA+TGG + chr4_4:4266839-4266858 Msa0664970:CDS 50.0%
!! ATTGTGAAGAGGAGCACCAG+TGG - chr4_4:4266939-4266958 None:intergenic 50.0%
! TGTAGGAAATGGGTTCCTCG+TGG + chr4_4:4267263-4267282 Msa0664970:intron 50.0%
TCTACTGAATGTTGGCCACG+AGG - chr4_4:4267281-4267300 None:intergenic 50.0%
GACCCAGATTCCCTTCAGAT+TGG - chr4_4:4267436-4267455 None:intergenic 50.0%
TAAGGCACGTTGGACCCAAT+TGG - chr4_4:4267712-4267731 None:intergenic 50.0%
TTAACCGGTGGAGTGAAAGG+AGG + chr4_4:4268251-4268270 Msa0664970:CDS 50.0%
CAATCCTCCTTTCACTCCAC+CGG - chr4_4:4268258-4268277 None:intergenic 50.0%
GATCAACATGCGGCAATGCT+TGG + chr4_4:4268473-4268492 Msa0664970:CDS 50.0%
TTGGACAAGCGTGCCGTAAA+GGG + chr4_4:4268492-4268511 Msa0664970:CDS 50.0%
! GGGGAGGCTAAAAGTACGTA+TGG + chr4_4:4268512-4268531 Msa0664970:CDS 50.0%
! GAAGGATCCGTTGCTATTGC+TGG + chr4_4:4268650-4268669 Msa0664970:CDS 50.0%
CAGTGGCTTAGAGATGGTCT+TGG + chr4_4:4268683-4268702 Msa0664970:CDS 50.0%
GCAAACAATCCGTTGAAGGC+AGG - chr4_4:4268782-4268801 None:intergenic 50.0%
CGGAGCAAACAATCCGTTGA+AGG - chr4_4:4268786-4268805 None:intergenic 50.0%
!! TCAACGGATTGTTTGCTCCG+TGG + chr4_4:4268786-4268805 Msa0664970:CDS 50.0%
CAACCTCTTGATGCAGACTC+AGG + chr4_4:4269003-4269022 Msa0664970:CDS 50.0%
!! AGCATAACCTGGGCCTTGTT+TGG + chr4_4:4269106-4269125 Msa0664970:intron 50.0%
AACAGCTAATCCGGCTGCAT+AGG - chr4_4:4269594-4269613 None:intergenic 50.0%
!! TATGCAGCCGGATTAGCTGT+TGG + chr4_4:4269593-4269612 Msa0664970:CDS 50.0%
!! ATGCAGCCGGATTAGCTGTT+GGG + chr4_4:4269594-4269613 Msa0664970:CDS 50.0%
!! CCGGATTAGCTGTTGGGATT+TGG + chr4_4:4269600-4269619 Msa0664970:CDS 50.0%
TCTTCTGGATGGCCAGTTGC+TGG + chr4_4:4268425-4268444 Msa0664970:CDS 55.0%
GCGATTGGGATACCAGCAAC+TGG - chr4_4:4268440-4268459 None:intergenic 55.0%
GTTGCTGGTATCCCAATCGC+TGG + chr4_4:4268440-4268459 Msa0664970:CDS 55.0%
CTTGGACAAGCGTGCCGTAA+AGG + chr4_4:4268491-4268510 Msa0664970:CDS 55.0%
TGGACAAGCGTGCCGTAAAG+GGG + chr4_4:4268493-4268512 Msa0664970:CDS 55.0%
CGCAGCTCCAGCAATAGCAA+CGG - chr4_4:4268660-4268679 None:intergenic 55.0%
! CGTTGCTATTGCTGGAGCTG+CGG + chr4_4:4268658-4268677 Msa0664970:CDS 55.0%
! ACGGATTGTTTGCTCCGTGG+TGG + chr4_4:4268789-4268808 Msa0664970:CDS 55.0%
! TGTTGGGCAGGCGGATTTGT+TGG + chr4_4:4269517-4269536 Msa0664970:intron 55.0%
TCTTCTGGATGGCCAGTTGC+TGG + chr4_4:4268425-4268444 Msa0664970:CDS 55.0%
GCGATTGGGATACCAGCAAC+TGG - chr4_4:4268440-4268459 None:intergenic 55.0%
GTTGCTGGTATCCCAATCGC+TGG + chr4_4:4268440-4268459 Msa0664970:CDS 55.0%
CTTGGACAAGCGTGCCGTAA+AGG + chr4_4:4268491-4268510 Msa0664970:CDS 55.0%
TGGACAAGCGTGCCGTAAAG+GGG + chr4_4:4268493-4268512 Msa0664970:CDS 55.0%
CGCAGCTCCAGCAATAGCAA+CGG - chr4_4:4268660-4268679 None:intergenic 55.0%
! CGTTGCTATTGCTGGAGCTG+CGG + chr4_4:4268658-4268677 Msa0664970:CDS 55.0%
! ACGGATTGTTTGCTCCGTGG+TGG + chr4_4:4268789-4268808 Msa0664970:CDS 55.0%
! TGTTGGGCAGGCGGATTTGT+TGG + chr4_4:4269517-4269536 Msa0664970:intron 55.0%
ACAAGCGTGCCGTAAAGGGG+AGG + chr4_4:4268496-4268515 Msa0664970:CDS 60.0%
GCGGTGCAGTGGCTTAGAGA+TGG + chr4_4:4268677-4268696 Msa0664970:CDS 60.0%
CGAGCATCATCACGCCACCA+CGG - chr4_4:4268806-4268825 None:intergenic 60.0%
! TGGTGGCGTGATGATGCTCG+TGG + chr4_4:4268806-4268825 Msa0664970:CDS 60.0%
! GGTGGCGTGATGATGCTCGT+GGG + chr4_4:4268807-4268826 Msa0664970:CDS 60.0%
CTTGGAGCAGCCTATGCAGC+CGG + chr4_4:4269581-4269600 Msa0664970:CDS 60.0%
ACAAGCGTGCCGTAAAGGGG+AGG + chr4_4:4268496-4268515 Msa0664970:CDS 60.0%
GCGGTGCAGTGGCTTAGAGA+TGG + chr4_4:4268677-4268696 Msa0664970:CDS 60.0%
CGAGCATCATCACGCCACCA+CGG - chr4_4:4268806-4268825 None:intergenic 60.0%
! TGGTGGCGTGATGATGCTCG+TGG + chr4_4:4268806-4268825 Msa0664970:CDS 60.0%
! GGTGGCGTGATGATGCTCGT+GGG + chr4_4:4268807-4268826 Msa0664970:CDS 60.0%
CTTGGAGCAGCCTATGCAGC+CGG + chr4_4:4269581-4269600 Msa0664970:CDS 60.0%
TTGCTGGAGCTGCGGTGCAG+TGG + chr4_4:4268666-4268685 Msa0664970:CDS 65.0%
TTGCTGGAGCTGCGGTGCAG+TGG + chr4_4:4268666-4268685 Msa0664970:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 4265521 4269999 4265521 ID=Msa0664970;Name=Msa0664970
chr4_4 mRNA 4265521 4269999 4265521 ID=Msa0664970-mRNA-1;Parent=Msa0664970;Name=Msa0664970-mRNA-1;_AED=0.00;_eAED=0.00;_QI=146|1|1|1|1|1|4|227|519
chr4_4 exon 4265521 4265800 4265521 ID=Msa0664970-mRNA-1:exon:1363;Parent=Msa0664970-mRNA-1
chr4_4 exon 4266778 4266999 4266778 ID=Msa0664970-mRNA-1:exon:1364;Parent=Msa0664970-mRNA-1
chr4_4 exon 4268067 4269024 4268067 ID=Msa0664970-mRNA-1:exon:1365;Parent=Msa0664970-mRNA-1
chr4_4 exon 4269527 4269999 4269527 ID=Msa0664970-mRNA-1:exon:1366;Parent=Msa0664970-mRNA-1
chr4_4 five_prime_UTR 4265521 4265666 4265521 ID=Msa0664970-mRNA-1:five_prime_utr;Parent=Msa0664970-mRNA-1
chr4_4 CDS 4265667 4265800 4265667 ID=Msa0664970-mRNA-1:cds;Parent=Msa0664970-mRNA-1
chr4_4 CDS 4266778 4266999 4266778 ID=Msa0664970-mRNA-1:cds;Parent=Msa0664970-mRNA-1
chr4_4 CDS 4268067 4269024 4268067 ID=Msa0664970-mRNA-1:cds;Parent=Msa0664970-mRNA-1
chr4_4 CDS 4269527 4269772 4269527 ID=Msa0664970-mRNA-1:cds;Parent=Msa0664970-mRNA-1
chr4_4 three_prime_UTR 4269773 4269999 4269773 ID=Msa0664970-mRNA-1:three_prime_utr;Parent=Msa0664970-mRNA-1
Gene Sequence

>Msa0664970

ATGTCGAAAGAAGATGTTTTCATTGGTGCAATTGACCAAGGAACAAGCAGTAGCAGATTCATAATATATGATAAATCAGCTAAACCAATTGGATCTCATCAAGTTGAATTCACTCAGTTCTATCCACAAGCAGGATGGGTGGAGCATGATCCAATGGAGATATTGGAGAGTGTGAAGGTTTGCATTACCAAGGCAGTGGATAAGGCAACAGCTGATGGATTCAATGTGGACAAAGGATTGAAAGCTATTGGTCTCACCAATCAAAGAGAGACTACTCTTGTTTGGAGCAAATCCACTGGTGCTCCTCTTCACAATGCTCTTGTTTGGATGGACGTTCGTACTACCTCTGTTTGCAGGAGACTGGAAAAGGAGTTATCTGGTGGTAGAACACATTTTGTAGAGAGCTGTGGTTTGCCTATTAGCACATATTTCAGTGCTTTGAAACTTCTGTGGTTGATGGAAAATGTGGATGCTGTCAAGGAAGCTATTAAGAAAAAAGATGCATTGTTTGGAACAATAGACACTTGGTTGATTTGGAACTTAACCGGTGGAGTGAAAGGAGGATTGCACGTCACTGATGCTTCAAATGCATCCCGAACAATGCTGATGAACCTAAAAACCCTCAACTGGGATGAATCTACCTTGAAAGCACTTCAAATCCCAGCTGAAATTTTGCCTAAAATTATCAGTAATTCAGAAATTATAGGCAATGTTTCTTCTGGATGGCCAGTTGCTGGTATCCCAATCGCTGGATGTTTAGGTGATCAACATGCGGCAATGCTTGGACAAGCGTGCCGTAAAGGGGAGGCTAAAAGTACGTATGGTACAGGTGCTTTCATTCTACTGAATACCGGCGAAGGAGTAGTTAAATCAAACCATGGCCTTCTGTCAACTATAGCTTATAAGCTTGGTCCGAATGCTCCAACCAATTATGCACTCGAAGGATCCGTTGCTATTGCTGGAGCTGCGGTGCAGTGGCTTAGAGATGGTCTTGGTCTCATTACAAATGCTAAAGATATAGAGGCTCTGGCATTAGAGGTAGAATCCAATGGTGGTGTTTACTTCGTTCCTGCCTTCAACGGATTGTTTGCTCCGTGGTGGCGTGATGATGCTCGTGGGATTTGTATCGGAATAACAAGGTATACTAGCAAGGCTCACATTGCTAGAGCCGTGCTTGAGAGCATATGTTTTCAAGTAAAAGATGTTATTGATTCAATGCACAAAGATTCTGGAGCAGATCAATCCAAGAAAGATGAGTTTTTGCTTAGGGTTGATGGTGGTGCAACTGTTAACAACCTCTTGATGCAGACTCAGGCGGATTTGTTGGCAACTTCAGTAATTAGACCAGCTGACATTGAAACAACAGCACTTGGAGCAGCCTATGCAGCCGGATTAGCTGTTGGGATTTGGAAAGAAGATTTCGTTTTCGATTCGAAGGACATGCTGAAGAATGCTAGTGTTTTCCGTCCTCTAATGGTTGAAGAAAATAGGAAAAAGAAAGTAGATTGTTGGGGAAAAGCTGTTAGTAGATCTTTTGACTTAGCAGATCTTTCTCTTTGA

Protein sequence

>Msa0664970

MSKEDVFIGAIDQGTSSSRFIIYDKSAKPIGSHQVEFTQFYPQAGWVEHDPMEILESVKVCITKAVDKATADGFNVDKGLKAIGLTNQRETTLVWSKSTGAPLHNALVWMDVRTTSVCRRLEKELSGGRTHFVESCGLPISTYFSALKLLWLMENVDAVKEAIKKKDALFGTIDTWLIWNLTGGVKGGLHVTDASNASRTMLMNLKTLNWDESTLKALQIPAEILPKIISNSEIIGNVSSGWPVAGIPIAGCLGDQHAAMLGQACRKGEAKSTYGTGAFILLNTGEGVVKSNHGLLSTIAYKLGPNAPTNYALEGSVAIAGAAVQWLRDGLGLITNAKDIEALALEVESNGGVYFVPAFNGLFAPWWRDDARGICIGITRYTSKAHIARAVLESICFQVKDVIDSMHKDSGADQSKKDEFLLRVDGGATVNNLLMQTQADLLATSVIRPADIETTALGAAYAAGLAVGIWKEDFVFDSKDMLKNASVFRPLMVEENRKKKVDCWGKAVSRSFDLADLSL*