AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1200810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1200810 MtrunA17_Chr8g0370441 94.220 173 10 0 1 173 1 173 2.05e-119 334
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1200810 AT4G16444.1 56.322 174 70 3 1 168 1 174 4.36e-59 182

Find 48 sgRNAs with CRISPR-Local

Find 568 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAATTATTGATTGATTTAA+AGG 0.119968 8_1:-53753571 None:intergenic
AAATTATCTCTAAACTAAAT+TGG 0.195782 8_1:+53753470 Msa1200810:five_prime_UTR
TATATGATATGCATTTCTTC+AGG 0.280325 8_1:+53761318 Msa1200810:three_prime_UTR
CGGCAAGAACAGGACGTTAC+TGG 0.342212 8_1:+53761254 Msa1200810:three_prime_UTR
AGTTCAAAATAACAATATTA+TGG 0.358657 8_1:+53757643 Msa1200810:CDS
CTTGGCTAGCAATATCTTCC+AGG 0.358950 8_1:+53761126 Msa1200810:CDS
TTGCAGGGAGATTATTATCT+TGG 0.368038 8_1:+53757609 Msa1200810:intron
TTGGATTGATAAATTCAAAC+AGG 0.425720 8_1:+53753691 Msa1200810:CDS
CAACAACTCGTGCAACCATT+TGG 0.441402 8_1:+53757276 Msa1200810:CDS
ATATGATATGCATTTCTTCA+GGG 0.446251 8_1:+53761319 Msa1200810:three_prime_UTR
ATCTTGAATTGAATCGATGA+TGG 0.446983 8_1:+53753592 Msa1200810:exon
GGATTTAAAACGGCAAGAAC+AGG 0.450059 8_1:+53761244 Msa1200810:three_prime_UTR
GCTGCTTGTGCAAAGGTGGA+TGG 0.462042 8_1:-53755665 None:intergenic
AGATTATTATCTTGGAAGAC+TGG 0.477667 8_1:+53757617 Msa1200810:CDS
CTTCATCGAGAATGACTGAT+TGG 0.485002 8_1:+53761199 Msa1200810:three_prime_UTR
TTTATTTGCAAACTCACGTA+TGG 0.496534 8_1:+53761158 Msa1200810:CDS
AGCTGGTTGGAGTGGTATCA+TGG 0.501539 8_1:+53761223 Msa1200810:three_prime_UTR
GCAAATAAATTTGCTAACCC+TGG 0.501955 8_1:-53761144 None:intergenic
GTGGTATCATGGATTTAAAA+CGG 0.505287 8_1:+53761234 Msa1200810:three_prime_UTR
CAGAAGACAGGCGGCTGCAA+AGG 0.508047 8_1:+53755694 Msa1200810:CDS
ACAAATGTTGATTATTCGCA+TGG 0.510430 8_1:-53753439 None:intergenic
CGAATAATCAACATTTGTCA+TGG 0.521754 8_1:+53753444 Msa1200810:five_prime_UTR
CACGGGTTACTTACTGCGAA+AGG 0.522380 8_1:-53754469 None:intergenic
TCATATAACAAGCAGGAGGC+AGG 0.524529 8_1:-53761302 None:intergenic
TGCAGGTTGGAATAATACCT+TGG 0.548398 8_1:+53761108 Msa1200810:intron
AGCAGCAAAACTCAGAAGAC+AGG 0.549517 8_1:+53755682 Msa1200810:CDS
ATGCATATCATATAACAAGC+AGG 0.554454 8_1:-53761309 None:intergenic
GGCAAGAACAGGACGTTACT+GGG 0.557261 8_1:+53761255 Msa1200810:three_prime_UTR
TCTTGAATTGAATCGATGAT+GGG 0.557537 8_1:+53753593 Msa1200810:exon
ACGGGTTACTTACTGCGAAA+GGG 0.558069 8_1:-53754468 None:intergenic
TTGGCTAGCAATATCTTCCA+GGG 0.562616 8_1:+53761127 Msa1200810:CDS
TGTTGAGATATGCTAGCCAC+AGG 0.581194 8_1:-53757258 None:intergenic
AATAAATAAGACTAATCCAA+AGG 0.595973 8_1:-53761430 None:intergenic
CTGGAAGATATTGCTAGCCA+AGG 0.596628 8_1:-53761125 None:intergenic
ACAGGCGGCTGCAAAGGAGA+AGG 0.598906 8_1:+53755700 Msa1200810:CDS
AGGTCATAATTTACATGATG+AGG 0.603687 8_1:+53757073 Msa1200810:intron
GAGAATGACTGATTGGTAGC+TGG 0.603904 8_1:+53761206 Msa1200810:three_prime_UTR
ATGACTGATTGGTAGCTGGT+TGG 0.603989 8_1:+53761210 Msa1200810:three_prime_UTR
TATAACAAGCAGGAGGCAGG+AGG 0.611538 8_1:-53761299 None:intergenic
GCTACAGGGTGGATCTGAGA+AGG 0.612886 8_1:+53754391 Msa1200810:intron
AGAACGATTAAGAATATGAG+AGG 0.613811 8_1:-53753647 None:intergenic
TTATTATCTTGGAAGACTGG+AGG 0.615774 8_1:+53757620 Msa1200810:CDS
AAAAGCTCTATTCATCACAA+AGG 0.630740 8_1:+53757112 Msa1200810:CDS
TGATTGGTAGCTGGTTGGAG+TGG 0.631619 8_1:+53761215 Msa1200810:three_prime_UTR
AGCAAAACTCAGAAGACAGG+CGG 0.649482 8_1:+53755685 Msa1200810:CDS
ATAACAAGCAGGAGGCAGGA+GGG 0.673958 8_1:-53761298 None:intergenic
TGTATAGAAAGTAAGTCATG+AGG 0.674576 8_1:+53761584 Msa1200810:three_prime_UTR
CATATCATATAACAAGCAGG+AGG 0.691484 8_1:-53761306 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTATTGATTGATTTAA+AGG - chr8_1:53753574-53753593 None:intergenic 10.0%
!! AATAGAAAAAATATAATTTC+AGG - chr8_1:53756578-53756597 None:intergenic 10.0%
!! CAAATATTTCAAATATAATA+AGG - chr8_1:53757690-53757709 None:intergenic 10.0%
!!! ATATCAAAATCATATTTTTT+TGG - chr8_1:53759864-53759883 None:intergenic 10.0%
!!! AAAAAAATATGATTTTGATA+TGG + chr8_1:53759863-53759882 Msa1200810:intron 10.0%
!!! AAAATATTTTATTTGTTTAC+TGG + chr8_1:53760082-53760101 Msa1200810:intron 10.0%
!! AAATTATCTCTAAACTAAAT+TGG + chr8_1:53753470-53753489 Msa1200810:five_prime_UTR 15.0%
!!! AATATTTAGACTGTTATTTT+GGG - chr8_1:53753950-53753969 None:intergenic 15.0%
!!! ATATTATTTTTGGAAATATG+AGG - chr8_1:53755109-53755128 None:intergenic 15.0%
!! GTCAAATATATAATTAATAG+AGG + chr8_1:53756411-53756430 Msa1200810:intron 15.0%
!!! TATATTTTTTCTATTATTGC+CGG + chr8_1:53756583-53756602 Msa1200810:intron 15.0%
!! AGTTCAAAATAACAATATTA+TGG + chr8_1:53757643-53757662 Msa1200810:CDS 15.0%
!! TTCTTTGTATTAGTATTATA+TGG + chr8_1:53757988-53758007 Msa1200810:intron 15.0%
!! AGACAGAAAAATAAATAAAA+AGG - chr8_1:53758105-53758124 None:intergenic 15.0%
!! TTTATCATTACCAAATTATT+GGG - chr8_1:53761024-53761043 None:intergenic 15.0%
!!! TTTTATCATTACCAAATTAT+TGG - chr8_1:53761025-53761044 None:intergenic 15.0%
!!! GTAAGTTTGTAAATTTTTTA+TGG + chr8_1:53761480-53761499 Msa1200810:three_prime_UTR 15.0%
!! AATATTGTATCACAAAACAA+CGG + chr8_1:53753856-53753875 Msa1200810:intron 20.0%
!!! CAATATTTAGACTGTTATTT+TGG - chr8_1:53753951-53753970 None:intergenic 20.0%
!!! TTGATAATATTCTGTATTAG+TGG + chr8_1:53754199-53754218 Msa1200810:intron 20.0%
!!! TCCTATATTTTTTACATTAG+CGG + chr8_1:53754232-53754251 Msa1200810:intron 20.0%
!!! AGAAATAAAACAACTTTTGA+AGG + chr8_1:53754436-53754455 Msa1200810:CDS 20.0%
!! AAGAAAAATAATGTATTGGA+TGG - chr8_1:53755014-53755033 None:intergenic 20.0%
!!! AAAATCTTCATTCCATTTTT+GGG - chr8_1:53755086-53755105 None:intergenic 20.0%
!!! CATCGTTAAGATATTATTTT+TGG - chr8_1:53755119-53755138 None:intergenic 20.0%
!! CAAAAATAATATCTTAACGA+TGG + chr8_1:53755117-53755136 Msa1200810:intron 20.0%
!!! ATTTTATCAGATCATATACT+GGG - chr8_1:53755220-53755239 None:intergenic 20.0%
!! TAAAATTACAAGTGAAACTA+TGG + chr8_1:53755334-53755353 Msa1200810:intron 20.0%
!! AAAATTACAAGTGAAACTAT+GGG + chr8_1:53755335-53755354 Msa1200810:intron 20.0%
!! AAAAAAATACAATGTAGTTG+TGG + chr8_1:53755522-53755541 Msa1200810:intron 20.0%
!! TATAGGATTCTATATAAATG+TGG + chr8_1:53755767-53755786 Msa1200810:intron 20.0%
!! TAACAAATTTATCTTCACAT+AGG - chr8_1:53755812-53755831 None:intergenic 20.0%
!! TATACCTAAATAGAAAAGTT+AGG + chr8_1:53755833-53755852 Msa1200810:intron 20.0%
!! AAATCATTAGAAAGAAAGTT+GGG - chr8_1:53755997-53756016 None:intergenic 20.0%
!! TAAATCATTAGAAAGAAAGT+TGG - chr8_1:53755998-53756017 None:intergenic 20.0%
!! TAATATCAAAGAAAAGCTAA+GGG + chr8_1:53756275-53756294 Msa1200810:intron 20.0%
!! ATATATAATTAATAGAGGCA+TGG + chr8_1:53756416-53756435 Msa1200810:intron 20.0%
!!! ACAAGAATTATTTTATGAAG+CGG - chr8_1:53757039-53757058 None:intergenic 20.0%
!! TGAAATTCAAATTTGATATC+AGG - chr8_1:53757143-53757162 None:intergenic 20.0%
!!! ATCTTTTTTTCTTTCTTTCT+GGG + chr8_1:53757414-53757433 Msa1200810:intron 20.0%
!!! TTTTCTTCTTTCAACATTAA+AGG - chr8_1:53757486-53757505 None:intergenic 20.0%
!! TTCATTAATATACATGTATC+AGG - chr8_1:53757848-53757867 None:intergenic 20.0%
!! TACAAAGAAAAGAAAAAATC+TGG - chr8_1:53757977-53757996 None:intergenic 20.0%
!!! ATGTAAATTTTATCTTGAGA+TGG - chr8_1:53759315-53759334 None:intergenic 20.0%
!! TTTACATCAATGAATAGAAT+AGG + chr8_1:53759328-53759347 Msa1200810:intron 20.0%
!! AGGTAACAAAGATATATAAT+AGG - chr8_1:53759432-53759451 None:intergenic 20.0%
!!! ATTCTTTAAGTTTAATCATG+AGG + chr8_1:53759786-53759805 Msa1200810:intron 20.0%
!!! GATTGTTGATAAAGATTATA+TGG - chr8_1:53759895-53759914 None:intergenic 20.0%
!!! TTGATGACATAGTAATAATT+TGG + chr8_1:53759949-53759968 Msa1200810:intron 20.0%
!! TGATGACATAGTAATAATTT+GGG + chr8_1:53759950-53759969 Msa1200810:intron 20.0%
!!! CAAATAAAATATTTTCAGAG+AGG - chr8_1:53760077-53760096 None:intergenic 20.0%
!!! GATTCATTTTTTGATTCATA+AGG - chr8_1:53760430-53760449 None:intergenic 20.0%
!! ATAACTCAAACTTAGTTATA+TGG + chr8_1:53760546-53760565 Msa1200810:intron 20.0%
!! TAACTCAAACTTAGTTATAT+GGG + chr8_1:53760547-53760566 Msa1200810:intron 20.0%
!! AGTTAAAGATGATTTCTATT+TGG - chr8_1:53760797-53760816 None:intergenic 20.0%
!! AAATAGAAATCATCTTTAAC+TGG + chr8_1:53760796-53760815 Msa1200810:intron 20.0%
!! TTATCATTACCAAATTATTG+GGG - chr8_1:53761023-53761042 None:intergenic 20.0%
!!! TTTTCCACTTGATATTTTTT+TGG + chr8_1:53761357-53761376 Msa1200810:three_prime_UTR 20.0%
!!! TTTCCACTTGATATTTTTTT+GGG + chr8_1:53761358-53761377 Msa1200810:three_prime_UTR 20.0%
!!! AGAAATTTTGTCTTCAAATA+AGG + chr8_1:53761391-53761410 Msa1200810:three_prime_UTR 20.0%
!!! AATAAGGAGATTTGTTTTAA+AGG + chr8_1:53761407-53761426 Msa1200810:three_prime_UTR 20.0%
!! AATAAATAAGACTAATCCAA+AGG - chr8_1:53761433-53761452 None:intergenic 20.0%
!!! AATTTGTTTGTTTTTGATGT+TGG + chr8_1:53761453-53761472 Msa1200810:three_prime_UTR 20.0%
!!! TAATTTGTGTTCTTTTTTTG+AGG + chr8_1:53761505-53761524 Msa1200810:three_prime_UTR 20.0%
!!! AATTTGTGTTCTTTTTTTGA+GGG + chr8_1:53761506-53761525 Msa1200810:three_prime_UTR 20.0%
!!! CTTTTCAATTTGCTTCTTAT+TGG + chr8_1:53753672-53753691 Msa1200810:CDS 25.0%
! TTGGATTGATAAATTCAAAC+AGG + chr8_1:53753691-53753710 Msa1200810:CDS 25.0%
!! TGTTGTTTACTTTGCTTAAT+TGG + chr8_1:53753757-53753776 Msa1200810:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+AGG + chr8_1:53753829-53753848 Msa1200810:intron 25.0%
! TACAATATTTAGACCTTGTT+TGG - chr8_1:53753845-53753864 None:intergenic 25.0%
! GTCTAAATATTGTATTGTAC+CGG + chr8_1:53753959-53753978 Msa1200810:intron 25.0%
!! TAAAGATTTGTTTATGCAGT+AGG + chr8_1:53754124-53754143 Msa1200810:intron 25.0%
! ACCGCTAATGTAAAAAATAT+AGG - chr8_1:53754236-53754255 None:intergenic 25.0%
!! TTTGTTCTAGTGATATGTTT+TGG + chr8_1:53754369-53754388 Msa1200810:intron 25.0%
!!! AATAAAACAACTTTTGAAGG+AGG + chr8_1:53754439-53754458 Msa1200810:CDS 25.0%
!!! AATATGCTCTGAATTGATTT+TGG - chr8_1:53754547-53754566 None:intergenic 25.0%
! AAATCAATTCAGAGCATATT+TGG + chr8_1:53754547-53754566 Msa1200810:intron 25.0%
!! ATTACTAGCTTCTTATTTCA+TGG - chr8_1:53754611-53754630 None:intergenic 25.0%
! AGCATTTGTCTTAAATAAAG+TGG - chr8_1:53754770-53754789 None:intergenic 25.0%
! ATTTAAGCTGTTTAGATTAC+CGG + chr8_1:53754819-53754838 Msa1200810:intron 25.0%
! AGTTTCTATTGTTTGAAAGA+TGG + chr8_1:53754949-53754968 Msa1200810:intron 25.0%
! TTTACTTTACTTCCCAAAAA+TGG + chr8_1:53755071-53755090 Msa1200810:intron 25.0%
!! GAAAATCTTCATTCCATTTT+TGG - chr8_1:53755087-53755106 None:intergenic 25.0%
! AATATCTTAACGATGGTATA+TGG + chr8_1:53755124-53755143 Msa1200810:intron 25.0%
!! ATGCAATGTAATGGAAATTT+GGG - chr8_1:53755164-53755183 None:intergenic 25.0%
!! AATGCAATGTAATGGAAATT+TGG - chr8_1:53755165-53755184 None:intergenic 25.0%
! AACTAACAAATGCAATGTAA+TGG - chr8_1:53755173-53755192 None:intergenic 25.0%
!! GATTTTATCAGATCATATAC+TGG - chr8_1:53755221-53755240 None:intergenic 25.0%
! AGCCAAATATCTTAAACATA+GGG - chr8_1:53755313-53755332 None:intergenic 25.0%
! TTAGTCAGTCTTAACAATAT+GGG - chr8_1:53755548-53755567 None:intergenic 25.0%
! TTAAGACTGACTAAGATATT+TGG + chr8_1:53755554-53755573 Msa1200810:intron 25.0%
!! GAATCCTAACTTTTCTATTT+AGG - chr8_1:53755840-53755859 None:intergenic 25.0%
! AATCATTAGAAAGAAAGTTG+GGG - chr8_1:53755996-53756015 None:intergenic 25.0%
! GTAATATCAAAGAAAAGCTA+AGG + chr8_1:53756274-53756293 Msa1200810:intron 25.0%
! ACTGAAAGGTTTACATATTA+CGG + chr8_1:53756484-53756503 Msa1200810:intron 25.0%
! GAATACAAAAGTAATACTCA+CGG + chr8_1:53756508-53756527 Msa1200810:intron 25.0%
! AATACAAAAGTAATACTCAC+GGG + chr8_1:53756509-53756528 Msa1200810:intron 25.0%
! TTAAAATAGTGCTGTAATTG+CGG + chr8_1:53756988-53757007 Msa1200810:intron 25.0%
!!! CAAGAATTATTTTATGAAGC+GGG - chr8_1:53757038-53757057 None:intergenic 25.0%
! TCTTGTTACATTTAATATCC+AGG + chr8_1:53757053-53757072 Msa1200810:intron 25.0%
! CAGTTTACATATTATCGTTA+CGG + chr8_1:53757161-53757180 Msa1200810:intron 25.0%
!!! CACATTTAATTTTGCTTATC+TGG + chr8_1:53757223-53757242 Msa1200810:CDS 25.0%
!!! TAATTTTGCTTATCTGGTTT+TGG + chr8_1:53757229-53757248 Msa1200810:CDS 25.0%
! ATCATAATTGCATTACCAAA+TGG - chr8_1:53757294-53757313 None:intergenic 25.0%
! CAGAAAGAAAGAAAAAAAGA+TGG - chr8_1:53757415-53757434 None:intergenic 25.0%
!!! CATCTTTTTTTCTTTCTTTC+TGG + chr8_1:53757413-53757432 Msa1200810:intron 25.0%
! TCAATATTATATTACACCAC+TGG - chr8_1:53757518-53757537 None:intergenic 25.0%
!! TTTTCTTCTTTCAACGTTAA+AGG - chr8_1:53757547-53757566 None:intergenic 25.0%
! TTAATGATTAGGAGCTAAAT+AGG - chr8_1:53757745-53757764 None:intergenic 25.0%
!!! AGAAGTTTTTTAAATCCACA+TGG - chr8_1:53757883-53757902 None:intergenic 25.0%
! GTGGATTTAAAAAACTTCTT+TGG + chr8_1:53757884-53757903 Msa1200810:intron 25.0%
! AAAATAAATAAAAAGGCTCG+TGG - chr8_1:53758098-53758117 None:intergenic 25.0%
!!! TTTTTCTTCTGCTTGTTTTT+TGG + chr8_1:53758674-53758693 Msa1200810:intron 25.0%
! ATCCAGTGTTCTATTAATAT+GGG + chr8_1:53758759-53758778 Msa1200810:intron 25.0%
!! ACTATGGAGAAAGATATTTT+CGG - chr8_1:53759642-53759661 None:intergenic 25.0%
! AGACTTATTATAGATCACTA+TGG - chr8_1:53759658-53759677 None:intergenic 25.0%
! TGATCTATAATAAGTCTGTA+TGG + chr8_1:53759661-53759680 Msa1200810:intron 25.0%
!!! TATTTTTTTGGTAACTTCCT+TGG - chr8_1:53759852-53759871 None:intergenic 25.0%
! ATCAACAATCCATAAGTTTA+TGG + chr8_1:53759905-53759924 Msa1200810:intron 25.0%
! TAGATCTTCTGTTGAAAAAT+TGG - chr8_1:53760019-53760038 None:intergenic 25.0%
!!! AATTTTTCAACAGAAGATCT+AGG + chr8_1:53760018-53760037 Msa1200810:intron 25.0%
!! TATTTTCCAACATGCTAATT+TGG - chr8_1:53760129-53760148 None:intergenic 25.0%
!! TTTTACATTATAGTGTCACA+AGG - chr8_1:53760154-53760173 None:intergenic 25.0%
!!! TTTTGTTTCTTGTTTTGCAA+GGG - chr8_1:53760490-53760509 None:intergenic 25.0%
!!! ATTTTGTTTCTTGTTTTGCA+AGG - chr8_1:53760491-53760510 None:intergenic 25.0%
! AACTCAAACTTAGTTATATG+GGG + chr8_1:53760548-53760567 Msa1200810:intron 25.0%
!!! TCTTTTGAAACTTTAATCTG+AGG + chr8_1:53760607-53760626 Msa1200810:intron 25.0%
!!! CTTTTGAAACTTTAATCTGA+GGG + chr8_1:53760608-53760627 Msa1200810:intron 25.0%
! AAATTGCATATACAATCTAC+TGG + chr8_1:53760878-53760897 Msa1200810:intron 25.0%
! TTAAGATTAGAGTAAAACTG+AGG - chr8_1:53760946-53760965 None:intergenic 25.0%
! TCTAATCTTAAGTAGTAAGT+TGG + chr8_1:53760955-53760974 Msa1200810:intron 25.0%
! TATATGATATGCATTTCTTC+AGG + chr8_1:53761318-53761337 Msa1200810:three_prime_UTR 25.0%
! ATATGATATGCATTTCTTCA+GGG + chr8_1:53761319-53761338 Msa1200810:three_prime_UTR 25.0%
! GTGGAAAAGAAAAAAAAAAC+AGG - chr8_1:53761345-53761364 None:intergenic 25.0%
!!! TTCCACTTGATATTTTTTTG+GGG + chr8_1:53761359-53761378 Msa1200810:three_prime_UTR 25.0%
! TTCTATTGTATCCAAAAAGA+GGG + chr8_1:53761533-53761552 Msa1200810:three_prime_UTR 25.0%
! ACAAATGTTGATTATTCGCA+TGG - chr8_1:53753442-53753461 None:intergenic 30.0%
CGAATAATCAACATTTGTCA+TGG + chr8_1:53753444-53753463 Msa1200810:five_prime_UTR 30.0%
! CTCGTTTAAGATGAAAAAAC+TGG - chr8_1:53753519-53753538 None:intergenic 30.0%
ATCTTGAATTGAATCGATGA+TGG + chr8_1:53753592-53753611 Msa1200810:exon 30.0%
TCTTGAATTGAATCGATGAT+GGG + chr8_1:53753593-53753612 Msa1200810:exon 30.0%
AGAACGATTAAGAATATGAG+AGG - chr8_1:53753650-53753669 None:intergenic 30.0%
! CGTTGTTTCGTTATTTGAAT+TGG + chr8_1:53753786-53753805 Msa1200810:intron 30.0%
TGTTCTATTCAAATTCCTCT+TGG + chr8_1:53754155-53754174 Msa1200810:intron 30.0%
CACTCTATCAATATCAAACA+CGG - chr8_1:53754283-53754302 None:intergenic 30.0%
! TGATATTGATAGAGTGCTAT+CGG + chr8_1:53754287-53754306 Msa1200810:intron 30.0%
! AACCATTTTCTTTCCATTGT+AGG - chr8_1:53754513-53754532 None:intergenic 30.0%
! TGGAAAGAAAATGGTTTTTC+TGG + chr8_1:53754517-53754536 Msa1200810:intron 30.0%
! GGAAAGAAAATGGTTTTTCT+GGG + chr8_1:53754518-53754537 Msa1200810:intron 30.0%
! GAAAGAAAATGGTTTTTCTG+GGG + chr8_1:53754519-53754538 Msa1200810:intron 30.0%
! CTTCTTATTTCATGGCAAAA+TGG - chr8_1:53754603-53754622 None:intergenic 30.0%
! CAACTTTTGAATTAAACGCT+TGG - chr8_1:53754731-53754750 None:intergenic 30.0%
TAGTTTCCATTCTTCAAACA+TGG + chr8_1:53754865-53754884 Msa1200810:intron 30.0%
TTCTATTGTTTGAAAGATGG+TGG + chr8_1:53754952-53754971 Msa1200810:intron 30.0%
GGGGAAGAAAAATAATGTAT+TGG - chr8_1:53755018-53755037 None:intergenic 30.0%
! ATAAGTTAGTTTCATCTGTG+GGG - chr8_1:53755038-53755057 None:intergenic 30.0%
! GATAAGTTAGTTTCATCTGT+GGG - chr8_1:53755039-53755058 None:intergenic 30.0%
! TGATAAGTTAGTTTCATCTG+TGG - chr8_1:53755040-53755059 None:intergenic 30.0%
! AATGTAATGGAAATTTGGGA+TGG - chr8_1:53755160-53755179 None:intergenic 30.0%
ATCTAGTCATTGAAAGTTAG+AGG + chr8_1:53755253-53755272 Msa1200810:intron 30.0%
TCTAGTCATTGAAAGTTAGA+GGG + chr8_1:53755254-53755273 Msa1200810:intron 30.0%
! TGCCCTATGTTTAAGATATT+TGG + chr8_1:53755308-53755327 Msa1200810:intron 30.0%
CAGCCAAATATCTTAAACAT+AGG - chr8_1:53755314-53755333 None:intergenic 30.0%
ACTGAGGATGAAATATTGAA+GGG + chr8_1:53755359-53755378 Msa1200810:intron 30.0%
CTTAGTCAGTCTTAACAATA+TGG - chr8_1:53755549-53755568 None:intergenic 30.0%
!!! ATCGTTTTTTTTGTTCTCTC+AGG + chr8_1:53755642-53755661 Msa1200810:intron 30.0%
CTATATGCGAAATAACTTAC+AGG - chr8_1:53755752-53755771 None:intergenic 30.0%
! CTGTAAGTTATTTCGCATAT+AGG + chr8_1:53755750-53755769 Msa1200810:intron 30.0%
TAGATGAAAGATAGTCCAAT+AGG - chr8_1:53755880-53755899 None:intergenic 30.0%
CATAAAACAGCTAGTAAAGA+AGG - chr8_1:53755908-53755927 None:intergenic 30.0%
!! CTTCTTTACTAGCTGTTTTA+TGG + chr8_1:53755906-53755925 Msa1200810:intron 30.0%
! GTCTTGATCTTATCTAGTTT+GGG - chr8_1:53755945-53755964 None:intergenic 30.0%
AGTCTTGATCTTATCTAGTT+TGG - chr8_1:53755946-53755965 None:intergenic 30.0%
TCTACCATCCTTTCAATAAT+AGG + chr8_1:53755965-53755984 Msa1200810:intron 30.0%
GACTTATTTCAATTGCTATG+TGG - chr8_1:53756394-53756413 None:intergenic 30.0%
TGGTGCATACACATAAAAAA+AGG + chr8_1:53756436-53756455 Msa1200810:intron 30.0%
GCTATTTGACAACATTGTTA+GGG + chr8_1:53756727-53756746 Msa1200810:intron 30.0%
! ATCCTCTTTGTAGTTTTCTA+AGG + chr8_1:53756768-53756787 Msa1200810:intron 30.0%
TTCCTTAGAAAACTACAAAG+AGG - chr8_1:53756773-53756792 None:intergenic 30.0%
AAAAAAACATCAGCTCAAGA+GGG - chr8_1:53756814-53756833 None:intergenic 30.0%
AAAAAAAACATCAGCTCAAG+AGG - chr8_1:53756815-53756834 None:intergenic 30.0%
!! ATTATTTTATGAAGCGGGAA+AGG - chr8_1:53757033-53757052 None:intergenic 30.0%
TCATCATGTAAATTATGACC+TGG - chr8_1:53757074-53757093 None:intergenic 30.0%
AGGTCATAATTTACATGATG+AGG + chr8_1:53757073-53757092 Msa1200810:intron 30.0%
AAAAGCTCTATTCATCACAA+AGG + chr8_1:53757112-53757131 Msa1200810:CDS 30.0%
TTTACATATTATCGTTACGG+AGG + chr8_1:53757164-53757183 Msa1200810:intron 30.0%
AAGAAAACAATGTATTCCAG+TGG + chr8_1:53757499-53757518 Msa1200810:intron 30.0%
AGATTATTATCTTGGAAGAC+TGG + chr8_1:53757617-53757636 Msa1200810:CDS 30.0%
GAACAGCACATTTAATGATT+AGG - chr8_1:53757756-53757775 None:intergenic 30.0%
TTAAATCCACATGGACATTT+GGG - chr8_1:53757874-53757893 None:intergenic 30.0%
TTTAAATCCACATGGACATT+TGG - chr8_1:53757875-53757894 None:intergenic 30.0%
TATTATCCATGCTATCTTAC+TGG - chr8_1:53757934-53757953 None:intergenic 30.0%
TGTGTTATGTATTAGGATAG+CGG - chr8_1:53758026-53758045 None:intergenic 30.0%
GGATAGTTGTGTTATGTATT+AGG - chr8_1:53758033-53758052 None:intergenic 30.0%
ATAACACAACTATCCACATT+GGG + chr8_1:53758038-53758057 Msa1200810:intron 30.0%
! TCCAAATATCTCCATTTTAC+AGG + chr8_1:53758069-53758088 Msa1200810:intron 30.0%
! CCAAATATCTCCATTTTACA+GGG + chr8_1:53758070-53758089 Msa1200810:intron 30.0%
!!! CTATTATTTTTGGACGTGAT+TGG + chr8_1:53758711-53758730 Msa1200810:intron 30.0%
CATATTAATAGAACACTGGA+TGG - chr8_1:53758760-53758779 None:intergenic 30.0%
CATCCAGTGTTCTATTAATA+TGG + chr8_1:53758758-53758777 Msa1200810:intron 30.0%
ATGTAACTGATAATCAGTAG+TGG + chr8_1:53758795-53758814 Msa1200810:intron 30.0%
TTGTTGAAAGGTGATGATAA+GGG + chr8_1:53759184-53759203 Msa1200810:intron 30.0%
! GTAAGCTTTTCATATCCTAT+TGG + chr8_1:53759364-53759383 Msa1200810:intron 30.0%
ATCTCATCATAATCCTTTGT+TGG - chr8_1:53759395-53759414 None:intergenic 30.0%
! TAATTTGCCTACATCTTCAT+TGG + chr8_1:53759600-53759619 Msa1200810:intron 30.0%
! GAGATTATTTAAAGCCGTAT+GGG - chr8_1:53759726-53759745 None:intergenic 30.0%
TGAGAATGACCATAAACTTA+TGG - chr8_1:53759917-53759936 None:intergenic 30.0%
TAATTCTCAACTGCTTCATA+TGG - chr8_1:53760044-53760063 None:intergenic 30.0%
TAAGATGATCTAGTCTAGAA+AGG + chr8_1:53760180-53760199 Msa1200810:intron 30.0%
ATTACAAATAGCTCCAGATA+TGG - chr8_1:53760323-53760342 None:intergenic 30.0%
AAACAAGAAACAAAATGCAG+TGG + chr8_1:53760495-53760514 Msa1200810:intron 30.0%
ACTCAAACTTAGTTATATGG+GGG + chr8_1:53760549-53760568 Msa1200810:intron 30.0%
TCTGTGTGTAAAGTATACTA+AGG - chr8_1:53760721-53760740 None:intergenic 30.0%
TTTGGTTGACATCAATTGAA+GGG - chr8_1:53760779-53760798 None:intergenic 30.0%
ATTTGGTTGACATCAATTGA+AGG - chr8_1:53760780-53760799 None:intergenic 30.0%
! TCATGATTTTCTGTAGCAAA+TGG + chr8_1:53760984-53761003 Msa1200810:intron 30.0%
GAATGACATTCACAAACTAT+TGG - chr8_1:53761068-53761087 None:intergenic 30.0%
CTGATATTATATGTCATTGC+AGG + chr8_1:53761091-53761110 Msa1200810:intron 30.0%
TATTATATGTCATTGCAGGT+TGG + chr8_1:53761095-53761114 Msa1200810:intron 30.0%
TTTATTTGCAAACTCACGTA+TGG + chr8_1:53761158-53761177 Msa1200810:CDS 30.0%
GTGGTATCATGGATTTAAAA+CGG + chr8_1:53761234-53761253 Msa1200810:three_prime_UTR 30.0%
ATGCATATCATATAACAAGC+AGG - chr8_1:53761312-53761331 None:intergenic 30.0%
TACCCCAAAAAAATATCAAG+TGG - chr8_1:53761364-53761383 None:intergenic 30.0%
!!! AGATTTGTTTTAAAGGCCTT+TGG + chr8_1:53761414-53761433 Msa1200810:three_prime_UTR 30.0%
!!! GTTTGTTTTTGATGTTGGAT+TGG + chr8_1:53761458-53761477 Msa1200810:three_prime_UTR 30.0%
GTTCTATTGTATCCAAAAAG+AGG + chr8_1:53761532-53761551 Msa1200810:three_prime_UTR 30.0%
TCTATTGTATCCAAAAAGAG+GGG + chr8_1:53761534-53761553 Msa1200810:three_prime_UTR 30.0%
!!! CTGTAGTTTTGACTTGAATT+CGG + chr8_1:53761558-53761577 Msa1200810:three_prime_UTR 30.0%
TGTATAGAAAGTAAGTCATG+AGG + chr8_1:53761584-53761603 Msa1200810:three_prime_UTR 30.0%
CGCAATGCATTTAGAGAATA+AGG - chr8_1:53753733-53753752 None:intergenic 35.0%
TTCAACGTAATCACAAGTGT+TGG + chr8_1:53754033-53754052 Msa1200810:intron 35.0%
AGTATCTGTGCAACAGAAAT+TGG + chr8_1:53754101-53754120 Msa1200810:intron 35.0%
!! ATATTCTCTAAGACACTGAC+AGG + chr8_1:53754331-53754350 Msa1200810:intron 35.0%
!!! TAGTGATATGTTTTGGCTAC+AGG + chr8_1:53754376-53754395 Msa1200810:intron 35.0%
!!! AGTGATATGTTTTGGCTACA+GGG + chr8_1:53754377-53754396 Msa1200810:intron 35.0%
CTCCTACAATGGAAAGAAAA+TGG + chr8_1:53754508-53754527 Msa1200810:intron 35.0%
TAACTAATCGAGCATGTGTT+TGG - chr8_1:53754680-53754699 None:intergenic 35.0%
! AAGACAAATGCTGTTACTTC+AGG + chr8_1:53754778-53754797 Msa1200810:intron 35.0%
TTTCCATTCTTCAAACATGG+TGG + chr8_1:53754868-53754887 Msa1200810:intron 35.0%
TTTCCACCATGTTTGAAGAA+TGG - chr8_1:53754874-53754893 None:intergenic 35.0%
! GTTGACATTGATTACCTGAA+AGG + chr8_1:53754907-53754926 Msa1200810:intron 35.0%
ATTGGATGGATCGAATGAAA+TGG - chr8_1:53755000-53755019 None:intergenic 35.0%
! TAAGTTAGTTTCATCTGTGG+GGG - chr8_1:53755037-53755056 None:intergenic 35.0%
CACTGAGGATGAAATATTGA+AGG + chr8_1:53755358-53755377 Msa1200810:intron 35.0%
CTGAGGATGAAATATTGAAG+GGG + chr8_1:53755360-53755379 Msa1200810:intron 35.0%
!! AAGCATCGATATGATTGCTA+AGG + chr8_1:53755404-53755423 Msa1200810:intron 35.0%
!! AGCATCGATATGATTGCTAA+GGG + chr8_1:53755405-53755424 Msa1200810:intron 35.0%
TATGCGAAATAACTTACAGG+AGG - chr8_1:53755749-53755768 None:intergenic 35.0%
AAAGAAAAGCTAAGGGAACT+GGG + chr8_1:53756282-53756301 Msa1200810:intron 35.0%
AAATTAGCAGATAACGTTGC+AGG + chr8_1:53756356-53756375 Msa1200810:intron 35.0%
!!! ACTATAGAAGTTTTGGCTAG+CGG - chr8_1:53756614-53756633 None:intergenic 35.0%
ATTTCCCTAATAGTGAAACG+AGG + chr8_1:53756641-53756660 Msa1200810:intron 35.0%
ATTCACTATGAAAACCGTAG+TGG - chr8_1:53756670-53756689 None:intergenic 35.0%
TTGTCAAATAGCGCTAATAG+CGG - chr8_1:53756719-53756738 None:intergenic 35.0%
CGCTATTTGACAACATTGTT+AGG + chr8_1:53756726-53756745 Msa1200810:intron 35.0%
AAAAAACATCAGCTCAAGAG+GGG - chr8_1:53756813-53756832 None:intergenic 35.0%
!! TTTGTTTCTCATCCTTTTGC+TGG + chr8_1:53756848-53756867 Msa1200810:intron 35.0%
AGGCTGATAAGATACATATG+TGG + chr8_1:53757184-53757203 Msa1200810:intron 35.0%
GATACATATGTGGTCATTGT+AGG + chr8_1:53757194-53757213 Msa1200810:intron 35.0%
! TTACTTTCTGCTCTTTTGCA+GGG + chr8_1:53757594-53757613 Msa1200810:intron 35.0%
TTGCAGGGAGATTATTATCT+TGG + chr8_1:53757609-53757628 Msa1200810:intron 35.0%
TTATTATCTTGGAAGACTGG+AGG + chr8_1:53757620-53757639 Msa1200810:CDS 35.0%
!!! ATGCTTTTTCTTTTGAGCGA+TGG + chr8_1:53757799-53757818 Msa1200810:intron 35.0%
!! TTTGGTGTCAATTGAAGTCT+TGG + chr8_1:53757902-53757921 Msa1200810:intron 35.0%
TAGCATGGATAATATCGTAG+TGG + chr8_1:53757940-53757959 Msa1200810:intron 35.0%
AGCATGGATAATATCGTAGT+GGG + chr8_1:53757941-53757960 Msa1200810:intron 35.0%
! TATGTATTAGGATAGCGGTA+TGG - chr8_1:53758021-53758040 None:intergenic 35.0%
CATAACACAACTATCCACAT+TGG + chr8_1:53758037-53758056 Msa1200810:intron 35.0%
CCCTGTAAAATGGAGATATT+TGG - chr8_1:53758073-53758092 None:intergenic 35.0%
!! GAAGTCAAAAGTACTATGCT+AGG - chr8_1:53758220-53758239 None:intergenic 35.0%
TCAGAATAAAGCTGTTCTGT+TGG + chr8_1:53758367-53758386 Msa1200810:intron 35.0%
!!! TTGTACTGTTTTGGTGTACA+TGG + chr8_1:53758498-53758517 Msa1200810:intron 35.0%
GTTTGTCTGATATCTTACCA+TGG + chr8_1:53758520-53758539 Msa1200810:intron 35.0%
!! TGTTTTCGAGATCTTTTGTC+AGG + chr8_1:53758546-53758565 Msa1200810:intron 35.0%
AAAATAATAGAGCAGTGACG+TGG - chr8_1:53758701-53758720 None:intergenic 35.0%
! CGTCACTGCTCTATTATTTT+TGG + chr8_1:53758701-53758720 Msa1200810:intron 35.0%
!!! ATTGGCTTCGGTCTTTTTTT+TGG + chr8_1:53758729-53758748 Msa1200810:intron 35.0%
CACCCATATTAATAGAACAC+TGG - chr8_1:53758764-53758783 None:intergenic 35.0%
CAGTGTTCTATTAATATGGG+TGG + chr8_1:53758762-53758781 Msa1200810:intron 35.0%
TGTTAGTAATGAATAGTGCC+AGG + chr8_1:53758821-53758840 Msa1200810:intron 35.0%
TGCAAAATGTTGTCCATCAA+TGG + chr8_1:53758861-53758880 Msa1200810:intron 35.0%
AAAATGTTGTCCATCAATGG+AGG + chr8_1:53758864-53758883 Msa1200810:intron 35.0%
AAATGTTGTCCATCAATGGA+GGG + chr8_1:53758865-53758884 Msa1200810:intron 35.0%
CATCAAATATCAAGCTGTGA+AGG + chr8_1:53758925-53758944 Msa1200810:intron 35.0%
GTTGTTGAAAGGTGATGATA+AGG + chr8_1:53759183-53759202 Msa1200810:intron 35.0%
ATAGAATAGGATACACGACT+AGG + chr8_1:53759341-53759360 Msa1200810:intron 35.0%
TAGAATAGGATACACGACTA+GGG + chr8_1:53759342-53759361 Msa1200810:intron 35.0%
! ATCCATCTAGGTTGACTTTA+AGG - chr8_1:53759470-53759489 None:intergenic 35.0%
CGAATGAAAATGATCCATCT+AGG - chr8_1:53759482-53759501 None:intergenic 35.0%
! ATGGATCATTTTCATTCGCA+AGG + chr8_1:53759484-53759503 Msa1200810:intron 35.0%
!! ATTGTCATCTAGCTCTTAGT+TGG + chr8_1:53759559-53759578 Msa1200810:intron 35.0%
TTAAGTGCATCAAGGTTTGT+TGG + chr8_1:53759690-53759709 Msa1200810:intron 35.0%
TTGGTTAGATGAATCCCATA+CGG + chr8_1:53759709-53759728 Msa1200810:intron 35.0%
! GGAGATTATTTAAAGCCGTA+TGG - chr8_1:53759727-53759746 None:intergenic 35.0%
TTAAATAATCTCCCCAGGTT+TGG + chr8_1:53759734-53759753 Msa1200810:intron 35.0%
TTCCAACATGCTAATTTGGA+AGG - chr8_1:53760125-53760144 None:intergenic 35.0%
TTATCTCACTGTGATATGTC+CGG + chr8_1:53760227-53760246 Msa1200810:intron 35.0%
TGCTTTCGAACAAAACTTAG+AGG - chr8_1:53760295-53760314 None:intergenic 35.0%
! CGAAAGCAATTTTCCATATC+TGG + chr8_1:53760307-53760326 Msa1200810:intron 35.0%
!!! GTGATTTTTTCTGTAGACTG+TGG + chr8_1:53760357-53760376 Msa1200810:intron 35.0%
AGGAAAGAACACTCAATAAG+AGG - chr8_1:53760452-53760471 None:intergenic 35.0%
AAGGGATAAAATTTCCTCTG+AGG - chr8_1:53760472-53760491 None:intergenic 35.0%
AATCGTCTATAGTCTGAGTT+TGG + chr8_1:53760572-53760591 Msa1200810:intron 35.0%
ATCAATTGAAGGGATGTTTG+GGG - chr8_1:53760769-53760788 None:intergenic 35.0%
CATCAATTGAAGGGATGTTT+GGG - chr8_1:53760770-53760789 None:intergenic 35.0%
ACATCAATTGAAGGGATGTT+TGG - chr8_1:53760771-53760790 None:intergenic 35.0%
!! ATCATCTTTAACTGGTTCTG+AGG + chr8_1:53760804-53760823 Msa1200810:intron 35.0%
!! TCATCTTTAACTGGTTCTGA+GGG + chr8_1:53760805-53760824 Msa1200810:intron 35.0%
AGATTAGAGTAAAACTGAGG+TGG - chr8_1:53760943-53760962 None:intergenic 35.0%
ATTACCAAATTATTGGGGTG+GGG - chr8_1:53761018-53761037 None:intergenic 35.0%
CATTACCAAATTATTGGGGT+GGG - chr8_1:53761019-53761038 None:intergenic 35.0%
TCATTACCAAATTATTGGGG+TGG - chr8_1:53761020-53761039 None:intergenic 35.0%
!! GCAAATAAATTTGCTAACCC+TGG - chr8_1:53761147-53761166 None:intergenic 35.0%
CATATCATATAACAAGCAGG+AGG - chr8_1:53761309-53761328 None:intergenic 35.0%
!!! TGTGTTCTTTTTTTGAGGGT+TGG + chr8_1:53761510-53761529 Msa1200810:three_prime_UTR 35.0%
! AGATAGTGGTTGCTAAAGCA+CGG - chr8_1:53754490-53754509 None:intergenic 40.0%
CTTTCCATTGTAGGAGATAG+TGG - chr8_1:53754504-53754523 None:intergenic 40.0%
! GAAGCTAGTAATTGCTGCTT+CGG + chr8_1:53754619-53754638 Msa1200810:intron 40.0%
AGCTGTTTAGATTACCGGAA+AGG + chr8_1:53754824-53754843 Msa1200810:intron 40.0%
GCTGTTTAGATTACCGGAAA+GGG + chr8_1:53754825-53754844 Msa1200810:intron 40.0%
TTTAGATTACCGGAAAGGGA+TGG + chr8_1:53754829-53754848 Msa1200810:intron 40.0%
! CATTGATTACCTGAAAGGAG+TGG + chr8_1:53754912-53754931 Msa1200810:intron 40.0%
ATTACCTGAAAGGAGTGGAA+TGG + chr8_1:53754917-53754936 Msa1200810:intron 40.0%
GTGGAATGAAGTGAACTTGT+TGG + chr8_1:53754971-53754990 Msa1200810:intron 40.0%
AAAGTTAGAGGGTAAGCCTA+TGG + chr8_1:53755265-53755284 Msa1200810:intron 40.0%
GTGCATTTGGACAAAACCAT+AGG - chr8_1:53755284-53755303 None:intergenic 40.0%
TGATTGCTAAGGGAGATGTA+TGG + chr8_1:53755415-53755434 Msa1200810:intron 40.0%
GATAGTCCAATAGGCATAGA+GGG - chr8_1:53755871-53755890 None:intergenic 40.0%
AGATAGTCCAATAGGCATAG+AGG - chr8_1:53755872-53755891 None:intergenic 40.0%
GGCTCCTATTATTGAAAGGA+TGG - chr8_1:53755972-53755991 None:intergenic 40.0%
CATTAGAAAGAAAGTTGGGG+AGG - chr8_1:53755993-53756012 None:intergenic 40.0%
AGAACGTTGTGATAGGTAAG+TGG - chr8_1:53756174-53756193 None:intergenic 40.0%
CAAAGAAAAGCTAAGGGAAC+TGG + chr8_1:53756281-53756300 Msa1200810:intron 40.0%
AGATAACGTTGCAGGCAAAT+GGG + chr8_1:53756364-53756383 Msa1200810:intron 40.0%
AGCACAGTTTACGTACTGAA+AGG + chr8_1:53756470-53756489 Msa1200810:intron 40.0%
GCTAGCCAAAACTTCTATAG+TGG + chr8_1:53756613-53756632 Msa1200810:intron 40.0%
! AGCAGCCACTATAGAAGTTT+TGG - chr8_1:53756621-53756640 None:intergenic 40.0%
GTGTCCTCGTTTCACTATTA+GGG - chr8_1:53756648-53756667 None:intergenic 40.0%
!!! TCCTTTTGCTGGTTTGTTGT+AGG + chr8_1:53756859-53756878 Msa1200810:intron 40.0%
TCCTACAACAAACCAGCAAA+AGG - chr8_1:53756863-53756882 None:intergenic 40.0%
ACCATAAACTGTCCTCCATT+TGG + chr8_1:53757339-53757358 Msa1200810:intron 40.0%
TCCAAATGGAGGACAGTTTA+TGG - chr8_1:53757343-53757362 None:intergenic 40.0%
! ACACTGAACAGACTTTTGTG+CGG - chr8_1:53757392-53757411 None:intergenic 40.0%
! CTTACTTTCTGCTCTTTTGC+AGG + chr8_1:53757593-53757612 Msa1200810:intron 40.0%
GAATAACCCAAATGTCCATG+TGG + chr8_1:53757865-53757884 Msa1200810:intron 40.0%
AGCTTTCCAGTAAGATAGCA+TGG + chr8_1:53757925-53757944 Msa1200810:intron 40.0%
!!! AGGCCACTTTTGTTCACATT+AGG + chr8_1:53758191-53758210 Msa1200810:intron 40.0%
CTGCCTAATGTGAACAAAAG+TGG - chr8_1:53758197-53758216 None:intergenic 40.0%
CAATCTCGATCAGCAATAAC+TGG - chr8_1:53758267-53758286 None:intergenic 40.0%
TATTGCTGATCGAGATTGAG+CGG + chr8_1:53758269-53758288 Msa1200810:intron 40.0%
!! ATTCTGAGACCACACAAACT+AGG - chr8_1:53758354-53758373 None:intergenic 40.0%
CATCTGTACTGGAAAGTAGA+AGG - chr8_1:53758409-53758428 None:intergenic 40.0%
! TTCCGACTCTTGTACTGTTT+TGG + chr8_1:53758489-53758508 Msa1200810:intron 40.0%
CACCAAAACAGTACAAGAGT+CGG - chr8_1:53758494-53758513 None:intergenic 40.0%
AGATCTCGAAAACAACTCCA+TGG - chr8_1:53758540-53758559 None:intergenic 40.0%
! ACAAAACAGTGCTGAAGAGT+CGG - chr8_1:53758653-53758672 None:intergenic 40.0%
!!! TTTTTGGACGTGATTGGCTT+CGG + chr8_1:53758717-53758736 Msa1200810:intron 40.0%
AATGTTGTCCATCAATGGAG+GGG + chr8_1:53758866-53758885 Msa1200810:intron 40.0%
CAAATATCAAGCTGTGAAGG+TGG + chr8_1:53758928-53758947 Msa1200810:intron 40.0%
TTCGTTGGCAAGTAGTTGTT+TGG - chr8_1:53759007-53759026 None:intergenic 40.0%
AAACAACTACTTGCCAACGA+AGG + chr8_1:53759006-53759025 Msa1200810:intron 40.0%
! TGCTGATAAGCATTGCCATA+TGG + chr8_1:53759061-53759080 Msa1200810:intron 40.0%
! TAAGCATTGCCATATGGAAG+AGG + chr8_1:53759067-53759086 Msa1200810:intron 40.0%
ATCACCTTTCAACAACCTCT+TGG - chr8_1:53759179-53759198 None:intergenic 40.0%
GGAGCAAATTAAGTGCATCA+AGG + chr8_1:53759682-53759701 Msa1200810:intron 40.0%
TACGTTCTCAAACCAAACCT+GGG - chr8_1:53759749-53759768 None:intergenic 40.0%
TTACGTTCTCAAACCAAACC+TGG - chr8_1:53759750-53759769 None:intergenic 40.0%
GTATTGTCAAAAGCTCTCCA+AGG + chr8_1:53759832-53759851 Msa1200810:intron 40.0%
TAATTTGGGAGCGACACATT+TGG + chr8_1:53759964-53759983 Msa1200810:intron 40.0%
CTCCTTCCAAATTAGCATGT+TGG + chr8_1:53760120-53760139 Msa1200810:intron 40.0%
! GATCTAGTCTAGAAAGGTAC+AGG + chr8_1:53760186-53760205 Msa1200810:intron 40.0%
AAACAGTCACGACACTTACT+GGG - chr8_1:53760263-53760282 None:intergenic 40.0%
AGACTGTGGCTACATATAGT+AGG + chr8_1:53760371-53760390 Msa1200810:intron 40.0%
ATTTCGATGCAGAATGCAGA+TGG + chr8_1:53760396-53760415 Msa1200810:intron 40.0%
ATTGAGTGTTCTTTCCTCAG+AGG + chr8_1:53760455-53760474 Msa1200810:intron 40.0%
TATTGCCCAATACTCAGACA+CGG - chr8_1:53760529-53760548 None:intergenic 40.0%
GCGTGTACATTTATGTGCAA+AGG + chr8_1:53760650-53760669 Msa1200810:intron 40.0%
GTACAATGTAGTGCAGAAAG+CGG - chr8_1:53760682-53760701 None:intergenic 40.0%
!!! TTCTGAGGGTGGTTTTGAAT+TGG + chr8_1:53760819-53760838 Msa1200810:intron 40.0%
TTAGAGTAAAACTGAGGTGG+TGG - chr8_1:53760940-53760959 None:intergenic 40.0%
TTACCAAATTATTGGGGTGG+GGG - chr8_1:53761017-53761036 None:intergenic 40.0%
! TGCAGGTTGGAATAATACCT+TGG + chr8_1:53761108-53761127 Msa1200810:intron 40.0%
TTGGCTAGCAATATCTTCCA+GGG + chr8_1:53761127-53761146 Msa1200810:CDS 40.0%
CTTCATCGAGAATGACTGAT+TGG + chr8_1:53761199-53761218 Msa1200810:three_prime_UTR 40.0%
! GGATTTAAAACGGCAAGAAC+AGG + chr8_1:53761244-53761263 Msa1200810:three_prime_UTR 40.0%
! AAACTACAGTCCCCTCTTTT+TGG - chr8_1:53761547-53761566 None:intergenic 40.0%
AGATGTGTCAGTGTCATGTC+AGG - chr8_1:53753987-53754006 None:intergenic 45.0%
GCACAGATACTTCTGCTTGA+AGG - chr8_1:53754092-53754111 None:intergenic 45.0%
ACTATAACGCAGTTGCCAAG+AGG - chr8_1:53754173-53754192 None:intergenic 45.0%
!!! GATATGTTTTGGCTACAGGG+TGG + chr8_1:53754380-53754399 Msa1200810:intron 45.0%
! ACGGGTTACTTACTGCGAAA+GGG - chr8_1:53754471-53754490 None:intergenic 45.0%
! GATAGTGGTTGCTAAAGCAC+GGG - chr8_1:53754489-53754508 None:intergenic 45.0%
GCAACCACTATCTCCTACAA+TGG + chr8_1:53754497-53754516 Msa1200810:intron 45.0%
CATAGGGCATAGTGTGCATT+TGG - chr8_1:53755297-53755316 None:intergenic 45.0%
! AAGTGAAACTATGGGCACTG+AGG + chr8_1:53755343-53755362 Msa1200810:intron 45.0%
GAAGGGGATTACTGATAGTC+TGG + chr8_1:53755376-53755395 Msa1200810:intron 45.0%
!! TTTTGCTGCTTGTGCAAAGG+TGG - chr8_1:53755672-53755691 None:intergenic 45.0%
!! GAGTTTTGCTGCTTGTGCAA+AGG - chr8_1:53755675-53755694 None:intergenic 45.0%
AGCAGCAAAACTCAGAAGAC+AGG + chr8_1:53755682-53755701 Msa1200810:CDS 45.0%
AGCAAAACTCAGAAGACAGG+CGG + chr8_1:53755685-53755704 Msa1200810:CDS 45.0%
TAGTCTCCCTCTATGCCTAT+TGG + chr8_1:53755862-53755881 Msa1200810:intron 45.0%
GGGAGGCTCCTATTATTGAA+AGG - chr8_1:53755976-53755995 None:intergenic 45.0%
AGTGACGAGAACGTTGTGAT+AGG - chr8_1:53756181-53756200 None:intergenic 45.0%
CAGATAACGTTGCAGGCAAA+TGG + chr8_1:53756363-53756382 Msa1200810:intron 45.0%
GATAACGTTGCAGGCAAATG+GGG + chr8_1:53756365-53756384 Msa1200810:intron 45.0%
ATAACGTTGCAGGCAAATGG+GGG + chr8_1:53756366-53756385 Msa1200810:intron 45.0%
GGTGTCCTCGTTTCACTATT+AGG - chr8_1:53756649-53756668 None:intergenic 45.0%
! TTTTATGAAGCGGGAAAGGC+AGG - chr8_1:53757029-53757048 None:intergenic 45.0%
TGTTGAGATATGCTAGCCAC+AGG - chr8_1:53757261-53757280 None:intergenic 45.0%
CAACAACTCGTGCAACCATT+TGG + chr8_1:53757276-53757295 Msa1200810:CDS 45.0%
! AGCACGTTTTCTCCAAATGG+AGG - chr8_1:53757354-53757373 None:intergenic 45.0%
TCCATTTGGAGAAAACGTGC+TGG + chr8_1:53757353-53757372 Msa1200810:intron 45.0%
! TCCAGCACGTTTTCTCCAAA+TGG - chr8_1:53757357-53757376 None:intergenic 45.0%
TTGGAAAACTGTGCCCAATG+TGG - chr8_1:53758054-53758073 None:intergenic 45.0%
CGTTGGAAAGAGATGTTCTG+CGG - chr8_1:53758157-53758176 None:intergenic 45.0%
TCGATCAGCAATAACTGGCT+AGG - chr8_1:53758262-53758281 None:intergenic 45.0%
TGATTTCAAGAACTCGACCC+AGG - chr8_1:53758316-53758335 None:intergenic 45.0%
TGGGTCGAGTTCTTGAAATC+AGG + chr8_1:53758315-53758334 Msa1200810:intron 45.0%
! GTTCATGCACCTAGTTTGTG+TGG + chr8_1:53758342-53758361 Msa1200810:intron 45.0%
! AAGCTGTTCTGTTGGTCTGT+TGG + chr8_1:53758375-53758394 Msa1200810:intron 45.0%
AAGCACTCCTACGTAACATC+TGG + chr8_1:53758454-53758473 Msa1200810:intron 45.0%
!! CTTGTCTGTACTGGACTAGT+GGG - chr8_1:53758583-53758602 None:intergenic 45.0%
TAGTCCAGTACAGACAAGGA+TGG + chr8_1:53758585-53758604 Msa1200810:intron 45.0%
AATGAATAGTGCCAGGCAAG+TGG + chr8_1:53758828-53758847 Msa1200810:intron 45.0%
ATGTTGTCCATCAATGGAGG+GGG + chr8_1:53758867-53758886 Msa1200810:intron 45.0%
! TGAATGGTGTCAAGAGACGA+TGG + chr8_1:53758896-53758915 Msa1200810:intron 45.0%
ATATCAAGCTGTGAAGGTGG+AGG + chr8_1:53758931-53758950 Msa1200810:intron 45.0%
TGCCATATGACCATGGTAGA+GGG + chr8_1:53759112-53759131 Msa1200810:intron 45.0%
!! AAGGTGATGATAAGGGTGTC+AGG + chr8_1:53759191-53759210 Msa1200810:intron 45.0%
!! TGATGATAAGGGTGTCAGGA+TGG + chr8_1:53759195-53759214 Msa1200810:intron 45.0%
GGATGGAGAGGTAATGATGA+TGG + chr8_1:53759212-53759231 Msa1200810:intron 45.0%
!! GAGGTAATGATGATGGTGCA+AGG + chr8_1:53759219-53759238 Msa1200810:intron 45.0%
! CCTTTGTTGGTTGAGCCAAT+AGG - chr8_1:53759382-53759401 None:intergenic 45.0%
!! CCTATTGGCTCAACCAACAA+AGG + chr8_1:53759379-53759398 Msa1200810:intron 45.0%
!! TGACTTTAAGGCCTGTTTGG+CGG - chr8_1:53759458-53759477 None:intergenic 45.0%
!! GGTTGACTTTAAGGCCTGTT+TGG - chr8_1:53759461-53759480 None:intergenic 45.0%
GGCCTTAAAGTCAACCTAGA+TGG + chr8_1:53759465-53759484 Msa1200810:intron 45.0%
CGCAAGGCTTGCATTGTTAA+AGG + chr8_1:53759500-53759519 Msa1200810:intron 45.0%
TAGACTCGCAGTGTCAACTA+CGG + chr8_1:53759530-53759549 Msa1200810:intron 45.0%
GCACAAGCCAATGAAGATGT+AGG - chr8_1:53759610-53759629 None:intergenic 45.0%
!! CGGCTTTAAATAATCTCCCC+AGG + chr8_1:53759729-53759748 Msa1200810:intron 45.0%
ACGTTCTCAAACCAAACCTG+GGG - chr8_1:53759748-53759767 None:intergenic 45.0%
! AACGTAAGTGAAGTACTCGC+AGG + chr8_1:53759763-53759782 Msa1200810:intron 45.0%
! CTAGTCTAGAAAGGTACAGG+AGG + chr8_1:53760189-53760208 Msa1200810:intron 45.0%
CTTACTGGGAAAGCAATGTC+CGG - chr8_1:53760249-53760268 None:intergenic 45.0%
CAAACAGTCACGACACTTAC+TGG - chr8_1:53760264-53760283 None:intergenic 45.0%
TTGGGGAACTGTATCAAACC+AGG - chr8_1:53760752-53760771 None:intergenic 45.0%
!! TCTTTAACTGGTTCTGAGGG+TGG + chr8_1:53760808-53760827 Msa1200810:intron 45.0%
ATTCCCCCACCCCAATAATT+TGG + chr8_1:53761011-53761030 Msa1200810:intron 45.0%
CTGGAAGATATTGCTAGCCA+AGG - chr8_1:53761128-53761147 None:intergenic 45.0%
CTTGGCTAGCAATATCTTCC+AGG + chr8_1:53761126-53761145 Msa1200810:CDS 45.0%
! GAGAATGACTGATTGGTAGC+TGG + chr8_1:53761206-53761225 Msa1200810:three_prime_UTR 45.0%
! ATGACTGATTGGTAGCTGGT+TGG + chr8_1:53761210-53761229 Msa1200810:three_prime_UTR 45.0%
TCATATAACAAGCAGGAGGC+AGG - chr8_1:53761305-53761324 None:intergenic 45.0%
!!! AATAATAATTAACTTTTAAA+TGG - chr8_1:53756124-53756143 None:intergenic 5.0%
TGTGACACGTGTCAGACATC+AGG + chr8_1:53754061-53754080 Msa1200810:intron 50.0%
GTGTGTCAGTGTTGTGTCAC+AGG + chr8_1:53754254-53754273 Msa1200810:intron 50.0%
ATCGCTTGCCAAACACGACA+AGG - chr8_1:53754313-53754332 None:intergenic 50.0%
! CACGGGTTACTTACTGCGAA+AGG - chr8_1:53754472-53754491 None:intergenic 50.0%
! TCCTTTTGATGCGCGTCTAG+TGG + chr8_1:53754577-53754596 Msa1200810:intron 50.0%
TCGGAAAAACGAGCGTCTAG+TGG + chr8_1:53754638-53754657 Msa1200810:intron 50.0%
AAAACGAGCGTCTAGTGGCT+CGG + chr8_1:53754643-53754662 Msa1200810:intron 50.0%
ATTACCGGAAAGGGATGGAG+TGG + chr8_1:53754834-53754853 Msa1200810:intron 50.0%
CATTCCACTCCATCCCTTTC+CGG - chr8_1:53754841-53754860 None:intergenic 50.0%
CAGTCCATTCCACTCCTTTC+AGG - chr8_1:53754924-53754943 None:intergenic 50.0%
AACATACCCGTGCATCCACA+CGG + chr8_1:53756024-53756043 Msa1200810:intron 50.0%
GGAACTGGGTCATCAATAGC+AGG + chr8_1:53756296-53756315 Msa1200810:intron 50.0%
!!! GTTTTGGCTAGCGGATGTAC+CGG - chr8_1:53756605-53756624 None:intergenic 50.0%
GTGAAACGAGGACACCACTA+CGG + chr8_1:53756653-53756672 Msa1200810:intron 50.0%
ATAGCGGCGCTATAGCATAG+TGG - chr8_1:53756703-53756722 None:intergenic 50.0%
!!! CTGGTTTTGGAGTACTCCTG+TGG + chr8_1:53757242-53757261 Msa1200810:CDS 50.0%
GTGTCTGCTAGGTATTCACG+TGG - chr8_1:53757447-53757466 None:intergenic 50.0%
GTGAATACCTAGCAGACACG+TGG + chr8_1:53757448-53757467 Msa1200810:intron 50.0%
GCTCGTGGTACCCTGTAAAA+TGG - chr8_1:53758083-53758102 None:intergenic 50.0%
! TTTGACTTCCAGCGAGTTGC+TGG + chr8_1:53758231-53758250 Msa1200810:intron 50.0%
! CTGTTCTGTTGGTCTGTTGG+TGG + chr8_1:53758378-53758397 Msa1200810:intron 50.0%
TCGCGTTCCAGATGTTACGT+AGG - chr8_1:53758464-53758483 None:intergenic 50.0%
! CCTTGTCTGTACTGGACTAG+TGG - chr8_1:53758584-53758603 None:intergenic 50.0%
CCACTAGTCCAGTACAGACA+AGG + chr8_1:53758581-53758600 Msa1200810:intron 50.0%
CCAACCATCCTTGTCTGTAC+TGG - chr8_1:53758592-53758611 None:intergenic 50.0%
CCAGTACAGACAAGGATGGT+TGG + chr8_1:53758589-53758608 Msa1200810:intron 50.0%
ATCACTACCCCCTCCATTGA+TGG - chr8_1:53758877-53758896 None:intergenic 50.0%
ATGGAGGGGGTAGTGATGAA+TGG + chr8_1:53758880-53758899 Msa1200810:intron 50.0%
CTACTTGCCAACGAAGGTAG+TGG + chr8_1:53759012-53759031 Msa1200810:intron 50.0%
! CCAACGAAGGTAGTGGTTGA+GGG + chr8_1:53759019-53759038 Msa1200810:intron 50.0%
! AGGTAGTGGTTGAGGGTTCT+TGG + chr8_1:53759026-53759045 Msa1200810:intron 50.0%
TAGTGGTTGAGGGTTCTTGG+AGG + chr8_1:53759029-53759048 Msa1200810:intron 50.0%
GCATTGCCATATGGAAGAGG+TGG + chr8_1:53759070-53759089 Msa1200810:intron 50.0%
TCACTGCCACCTCTTCCATA+TGG - chr8_1:53759079-53759098 None:intergenic 50.0%
CAAGCAGTGCCATATGACCA+TGG + chr8_1:53759105-53759124 Msa1200810:intron 50.0%
GTGCCATATGACCATGGTAG+AGG + chr8_1:53759111-53759130 Msa1200810:intron 50.0%
CACCCTCTACCATGGTCATA+TGG - chr8_1:53759117-53759136 None:intergenic 50.0%
! GCAATGGGGAGTGTATTTGG+CGG + chr8_1:53759147-53759166 Msa1200810:intron 50.0%
GCAGCCAAGAGGTTGTTGAA+AGG + chr8_1:53759172-53759191 Msa1200810:intron 50.0%
!! ATAAGGGTGTCAGGATGGAG+AGG + chr8_1:53759200-53759219 Msa1200810:intron 50.0%
ATGGTGCAAGGCAATCGTGA+CGG + chr8_1:53759231-53759250 Msa1200810:intron 50.0%
! TCGGGTGGTGATGCTTGAAA+AGG + chr8_1:53759263-53759282 Msa1200810:intron 50.0%
! CGGGTGGTGATGCTTGAAAA+GGG + chr8_1:53759264-53759283 Msa1200810:intron 50.0%
TGTTACCTTGACCGCCAAAC+AGG + chr8_1:53759444-53759463 Msa1200810:intron 50.0%
AGACCACCGTGTCTGAGTAT+TGG + chr8_1:53760520-53760539 Msa1200810:intron 50.0%
GACCACCGTGTCTGAGTATT+GGG + chr8_1:53760521-53760540 Msa1200810:intron 50.0%
TACACACAGACTTTCACGCC+TGG + chr8_1:53760731-53760750 Msa1200810:intron 50.0%
! TGATTGGTAGCTGGTTGGAG+TGG + chr8_1:53761215-53761234 Msa1200810:three_prime_UTR 50.0%
AGCTGGTTGGAGTGGTATCA+TGG + chr8_1:53761223-53761242 Msa1200810:three_prime_UTR 50.0%
GGCAAGAACAGGACGTTACT+GGG + chr8_1:53761255-53761274 Msa1200810:three_prime_UTR 50.0%
ATAACAAGCAGGAGGCAGGA+GGG - chr8_1:53761301-53761320 None:intergenic 50.0%
TATAACAAGCAGGAGGCAGG+AGG - chr8_1:53761302-53761321 None:intergenic 50.0%
GTCAGTGTCATGTCAGGTGC+CGG - chr8_1:53753981-53754000 None:intergenic 55.0%
! GCTATCGGCCTTGTCGTGTT+TGG + chr8_1:53754302-53754321 Msa1200810:intron 55.0%
GCTACAGGGTGGATCTGAGA+AGG + chr8_1:53754391-53754410 Msa1200810:intron 55.0%
GCCACTAGACGCGCATCAAA+AGG - chr8_1:53754581-53754600 None:intergenic 55.0%
GCTGCTTGTGCAAAGGTGGA+TGG - chr8_1:53755668-53755687 None:intergenic 55.0%
ACATACCCGTGCATCCACAC+GGG + chr8_1:53756025-53756044 Msa1200810:intron 55.0%
AGTCATGCCACGTGTCTGCT+AGG - chr8_1:53757458-53757477 None:intergenic 55.0%
CCTGAACTGAGTCAGTGCGT+TGG - chr8_1:53758174-53758193 None:intergenic 55.0%
!! CCAACGCACTGACTCAGTTC+AGG + chr8_1:53758171-53758190 Msa1200810:intron 55.0%
AGGTACAACCAGCAACTCGC+TGG - chr8_1:53758242-53758261 None:intergenic 55.0%
TGCTGATCGAGATTGAGCGG+AGG + chr8_1:53758272-53758291 Msa1200810:intron 55.0%
!! CGTAGGAGTGCTTCAAGCAC+TGG - chr8_1:53758447-53758466 None:intergenic 55.0%
! GGAAAACCGCCTCTAGGAGA+GGG - chr8_1:53758632-53758651 None:intergenic 55.0%
AGAGTCGGAAAACCGCCTCT+AGG - chr8_1:53758638-53758657 None:intergenic 55.0%
! AATCACCTCTGCCACTTGCC+TGG - chr8_1:53758842-53758861 None:intergenic 55.0%
! TGGAGGATACCAGAGAGTGC+TGG + chr8_1:53758948-53758967 Msa1200810:intron 55.0%
!! GGAGGATACCAGAGAGTGCT+GGG + chr8_1:53758949-53758968 Msa1200810:intron 55.0%
!! GAGGATACCAGAGAGTGCTG+GGG + chr8_1:53758950-53758969 Msa1200810:intron 55.0%
!! AGGATACCAGAGAGTGCTGG+GGG + chr8_1:53758951-53758970 Msa1200810:intron 55.0%
! AGAGTGCCTGATGTTGGCAG+TGG + chr8_1:53758975-53758994 Msa1200810:intron 55.0%
TGCCTGATGTTGGCAGTGGA+GGG + chr8_1:53758979-53758998 Msa1200810:intron 55.0%
! GCCAACGAAGGTAGTGGTTG+AGG + chr8_1:53759018-53759037 Msa1200810:intron 55.0%
CCCTCAACCACTACCTTCGT+TGG - chr8_1:53759022-53759041 None:intergenic 55.0%
!! CCATGGTAGAGGGTGTCATG+CGG + chr8_1:53759122-53759141 Msa1200810:intron 55.0%
! GCGGCAATGGGGAGTGTATT+TGG + chr8_1:53759144-53759163 Msa1200810:intron 55.0%
! ATGGGGAGTGTATTTGGCGG+TGG + chr8_1:53759150-53759169 Msa1200810:intron 55.0%
ATCGTGACGGTGGAGGTTGT+CGG + chr8_1:53759244-53759263 Msa1200810:intron 55.0%
TAAGGCCTGTTTGGCGGTCA+AGG - chr8_1:53759452-53759471 None:intergenic 55.0%
TGCCCAATACTCAGACACGG+TGG - chr8_1:53760526-53760545 None:intergenic 55.0%
CGGCAAGAACAGGACGTTAC+TGG + chr8_1:53761254-53761273 Msa1200810:three_prime_UTR 55.0%
CAGAAGACAGGCGGCTGCAA+AGG + chr8_1:53755694-53755713 Msa1200810:CDS 60.0%
ACAGGCGGCTGCAAAGGAGA+AGG + chr8_1:53755700-53755719 Msa1200810:CDS 60.0%
CAGTACCCGTGTGGATGCAC+GGG - chr8_1:53756033-53756052 None:intergenic 60.0%
CCAGTACCCGTGTGGATGCA+CGG - chr8_1:53756034-53756053 None:intergenic 60.0%
!! GCATCCACACGGGTACTGGT+TGG + chr8_1:53756035-53756054 Msa1200810:intron 60.0%
ACGACCAACCAGTACCCGTG+TGG - chr8_1:53756042-53756061 None:intergenic 60.0%
!! ACACGGGTACTGGTTGGTCG+TGG + chr8_1:53756041-53756060 Msa1200810:intron 60.0%
CGAGATTGAGCGGAGGACTG+TGG + chr8_1:53758279-53758298 Msa1200810:intron 60.0%
ACTGTGGCTAGTGGTGAGCC+TGG + chr8_1:53758295-53758314 Msa1200810:intron 60.0%
CTGTGGCTAGTGGTGAGCCT+GGG + chr8_1:53758296-53758315 Msa1200810:intron 60.0%
TGAGTCACGCCCTCTCCTAG+AGG + chr8_1:53758620-53758639 Msa1200810:intron 60.0%
! CGGAAAACCGCCTCTAGGAG+AGG - chr8_1:53758633-53758652 None:intergenic 60.0%
TAGTGCCAGGCAAGTGGCAG+AGG + chr8_1:53758834-53758853 Msa1200810:intron 60.0%
!! GGATACCAGAGAGTGCTGGG+GGG + chr8_1:53758952-53758971 Msa1200810:intron 60.0%
GTGCCTGATGTTGGCAGTGG+AGG + chr8_1:53758978-53758997 Msa1200810:intron 60.0%
CACCCTCCACTGCCAACATC+AGG - chr8_1:53758984-53759003 None:intergenic 60.0%
CCGCATGACACCCTCTACCA+TGG - chr8_1:53759125-53759144 None:intergenic 60.0%
!! TGGTAGAGGGTGTCATGCGG+CGG + chr8_1:53759125-53759144 Msa1200810:intron 60.0%
ATTTGGCGGTGGCAGCCAAG+AGG + chr8_1:53759161-53759180 Msa1200810:intron 60.0%
GTGCAAGGCAATCGTGACGG+TGG + chr8_1:53759234-53759253 Msa1200810:intron 60.0%
CAAGGCAATCGTGACGGTGG+AGG + chr8_1:53759237-53759256 Msa1200810:intron 60.0%
TCGTGACGGTGGAGGTTGTC+GGG + chr8_1:53759245-53759264 Msa1200810:intron 60.0%
CCGTGCATCCACACGGGTAC+TGG + chr8_1:53756031-53756050 Msa1200810:intron 65.0%
GAGCGGAGGACTGTGGCTAG+TGG + chr8_1:53758286-53758305 Msa1200810:intron 65.0%
GTCACGCCCTCTCCTAGAGG+CGG + chr8_1:53758623-53758642 Msa1200810:intron 65.0%
ACTCTCCCCCCAGCACTCTC+TGG - chr8_1:53758960-53758979 None:intergenic 65.0%
!! GGGGGGAGAGTGCCTGATGT+TGG + chr8_1:53758969-53758988 Msa1200810:intron 65.0%
! AGGGTGTCATGCGGCGGCAA+TGG + chr8_1:53759131-53759150 Msa1200810:intron 65.0%
! GGGTGTCATGCGGCGGCAAT+GGG + chr8_1:53759132-53759151 Msa1200810:intron 65.0%
! GGTGTCATGCGGCGGCAATG+GGG + chr8_1:53759133-53759152 Msa1200810:intron 65.0%
TGACGGTGGAGGTTGTCGGG+TGG + chr8_1:53759248-53759267 Msa1200810:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 53753436 53761672 53753436 ID=Msa1200810;Name=Msa1200810
chr8_1 mRNA 53753436 53761672 53753436 ID=Msa1200810-mRNA-1;Parent=Msa1200810;Name=Msa1200810-mRNA-1;_AED=0.06;_eAED=0.06;_QI=172|1|1|1|0.83|0.85|7|485|173
chr8_1 exon 53753436 53753712 53753436 ID=Msa1200810-mRNA-1:exon:17202;Parent=Msa1200810-mRNA-1
chr8_1 exon 53754398 53754477 53754398 ID=Msa1200810-mRNA-1:exon:17203;Parent=Msa1200810-mRNA-1
chr8_1 exon 53755664 53755734 53755664 ID=Msa1200810-mRNA-1:exon:17204;Parent=Msa1200810-mRNA-1
chr8_1 exon 53757075 53757133 53757075 ID=Msa1200810-mRNA-1:exon:17205;Parent=Msa1200810-mRNA-1
chr8_1 exon 53757216 53757297 53757216 ID=Msa1200810-mRNA-1:exon:17206;Parent=Msa1200810-mRNA-1
chr8_1 exon 53757615 53757664 53757615 ID=Msa1200810-mRNA-1:exon:17207;Parent=Msa1200810-mRNA-1
chr8_1 exon 53761113 53761672 53761113 ID=Msa1200810-mRNA-1:exon:17208;Parent=Msa1200810-mRNA-1
chr8_1 five_prime_UTR 53753436 53753607 53753436 ID=Msa1200810-mRNA-1:five_prime_utr;Parent=Msa1200810-mRNA-1
chr8_1 CDS 53753608 53753712 53753608 ID=Msa1200810-mRNA-1:cds;Parent=Msa1200810-mRNA-1
chr8_1 CDS 53754398 53754477 53754398 ID=Msa1200810-mRNA-1:cds;Parent=Msa1200810-mRNA-1
chr8_1 CDS 53755664 53755734 53755664 ID=Msa1200810-mRNA-1:cds;Parent=Msa1200810-mRNA-1
chr8_1 CDS 53757075 53757133 53757075 ID=Msa1200810-mRNA-1:cds;Parent=Msa1200810-mRNA-1
chr8_1 CDS 53757216 53757297 53757216 ID=Msa1200810-mRNA-1:cds;Parent=Msa1200810-mRNA-1
chr8_1 CDS 53757615 53757664 53757615 ID=Msa1200810-mRNA-1:cds;Parent=Msa1200810-mRNA-1
chr8_1 CDS 53761113 53761187 53761113 ID=Msa1200810-mRNA-1:cds;Parent=Msa1200810-mRNA-1
chr8_1 three_prime_UTR 53761188 53761672 53761188 ID=Msa1200810-mRNA-1:three_prime_utr;Parent=Msa1200810-mRNA-1
Gene Sequence

>Msa1200810

ATGATGGGAGAAGAAGAACTTGAAAGATCATTCGCAGCTCCTCTCATATTCTTAATCGTTCTCGCTTTTCAATTTGCTTCTTATTGGATTGATAAATTCAAACAGGGTGGATCTGAGAAGGAAAAAGAAATTCAGTTGCGTGCAGAAATAAAACAACTTTTGAAGGAGGCAAGCTCCCTTTCGCAGCCATCCACCTTTGCACAAGCAGCAAAACTCAGAAGACAGGCGGCTGCAAAGGAGAAGGAACTTGCAAAGTGTCATAATTTACATGATGAGGACACAGCTTTGTATTCAAAAGCTCTATTCATCACAAAGGTTTTAACACATTTAATTTTGCTTATCTGGTTTTGGAGTACTCCTGTGGCTAGCATATCTCAACAACTCGTGCAACCATTTGGGAGATTATTATCTTGGAAGACTGGAGGAGTTCAAAATAACAATATTATGGTTGGAATAATACCTTGGCTAGCAATATCTTCCAGGGTTAGCAAATTTATTTGCAAACTCACGTATGGCAAATAG
Protein sequence

>Msa1200810

MMGEEELERSFAAPLIFLIVLAFQFASYWIDKFKQGGSEKEKEIQLRAEIKQLLKEASSLSQPSTFAQAAKLRRQAAAKEKELAKCHNLHDEDTALYSKALFITKVLTHLILLIWFWSTPVASISQQLVQPFGRLLSWKTGGVQNNNIMVGIIPWLAISSRVSKFICKLTYGK*