Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0258590 | XP_015872676.2 | 41.860 | 774 | 326 | 15 | 44 | 727 | 38 | 777 | 0.0 | 579 |
| Msa0258590 | XP_015872676.2 | 44.178 | 292 | 122 | 4 | 477 | 728 | 52 | 342 | 1.16e-71 | 259 |
| Msa0258590 | XP_015872676.2 | 60.265 | 302 | 74 | 4 | 26 | 281 | 455 | 756 | 1.55e-113 | 371 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0258590 | G7ITR5 | 58.908 | 348 | 94 | 7 | 428 | 728 | 1 | 346 | 4.22e-128 | 394 |
| Msa0258590 | G7ITR5 | 85.802 | 324 | 3 | 2 | 1 | 281 | 1 | 324 | 0.0 | 563 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044260 | Msa0258590 | 0.832021 | 1.198756e-55 | -8.615850e-47 |
| Msa0044330 | Msa0258590 | 0.840522 | 8.266091e-58 | -8.615850e-47 |
| Msa0079110 | Msa0258590 | 0.806107 | 9.657219e-50 | -8.615850e-47 |
| Msa0138020 | Msa0258590 | 0.806062 | 9.871168e-50 | -8.615850e-47 |
| Msa0189040 | Msa0258590 | 0.814983 | 1.166778e-51 | -8.615850e-47 |
| Msa0231060 | Msa0258590 | 0.814676 | 1.364429e-51 | -8.615850e-47 |
| Msa0241140 | Msa0258590 | 0.818944 | 1.504930e-52 | -8.615850e-47 |
| Msa0257500 | Msa0258590 | 0.800773 | 1.231392e-48 | -8.615850e-47 |
| Msa0258590 | Msa0267370 | 0.819930 | 8.968922e-53 | -8.615850e-47 |
| Msa0258590 | Msa0296480 | 0.842603 | 2.337167e-58 | -8.615850e-47 |
| Msa0258590 | Msa0298040 | 0.823753 | 1.168902e-53 | -8.615850e-47 |
| Msa0258590 | Msa0334770 | 0.823687 | 1.211375e-53 | -8.615850e-47 |
| Msa0258590 | Msa0393620 | 0.804428 | 2.170261e-49 | -8.615850e-47 |
| Msa0258590 | Msa0417330 | 0.811251 | 7.687239e-51 | -8.615850e-47 |
| Msa0258590 | Msa0460130 | 0.820710 | 5.940510e-53 | -8.615850e-47 |
| Msa0258590 | Msa0464120 | 0.803219 | 3.869863e-49 | -8.615850e-47 |
| Msa0258590 | Msa0518380 | 0.822094 | 2.847304e-53 | -8.615850e-47 |
| Msa0258590 | Msa0680660 | 0.801236 | 9.901528e-49 | -8.615850e-47 |
| Msa0258590 | Msa0688390 | 0.826092 | 3.279409e-54 | -8.615850e-47 |
| Msa0258590 | Msa0707250 | 0.807869 | 4.093560e-50 | -8.615850e-47 |
| Msa0258590 | Msa0711150 | 0.803531 | 3.334073e-49 | -8.615850e-47 |
| Msa0258590 | Msa0784480 | 0.822383 | 2.439388e-53 | -8.615850e-47 |
| Msa0258590 | Msa0817460 | 0.800139 | 1.657951e-48 | -8.615850e-47 |
| Msa0258590 | Msa0822500 | 0.807660 | 4.534197e-50 | -8.615850e-47 |
| Msa0258590 | Msa0831850 | 0.826109 | 3.249390e-54 | -8.615850e-47 |
| Msa0258590 | Msa0969810 | 0.804215 | 2.404365e-49 | -8.615850e-47 |
| Msa0258590 | Msa1001390 | 0.819513 | 1.116483e-52 | -8.615850e-47 |
| Msa0258590 | Msa1018980 | 0.809420 | 1.909261e-50 | -8.615850e-47 |
| Msa0258590 | Msa1026940 | 0.831819 | 1.344315e-55 | -8.615850e-47 |
| Msa0258590 | Msa1032770 | 0.806278 | 8.891446e-50 | -8.615850e-47 |
| Msa0258590 | Msa1032800 | 0.814247 | 1.697516e-51 | -8.615850e-47 |
| Msa0258590 | Msa1035480 | 0.804085 | 2.558229e-49 | -8.615850e-47 |
| Msa0258590 | Msa1064250 | 0.821213 | 4.549777e-53 | -8.615850e-47 |
| Msa0258590 | Msa1109090 | 0.807686 | 4.477253e-50 | -8.615850e-47 |
| Msa0258590 | Msa1111870 | 0.801312 | 9.556957e-49 | -8.615850e-47 |
| Msa0258590 | Msa1121490 | 0.802033 | 6.797845e-49 | -8.615850e-47 |
| Msa0258590 | Msa1122860 | 0.807933 | 3.968295e-50 | -8.615850e-47 |
| Msa0258590 | Msa1162780 | 0.823261 | 1.523453e-53 | -8.615850e-47 |
| Msa0258590 | Msa1185110 | 0.817437 | 3.299607e-52 | -8.615850e-47 |
| Msa0258590 | Msa1200810 | 0.802711 | 4.927519e-49 | -8.615850e-47 |
| Msa0258590 | Msa1207310 | 0.803275 | 3.767565e-49 | -8.615850e-47 |
| Msa0258590 | Msa1306560 | 0.820435 | 6.870999e-53 | -8.615850e-47 |
| Msa0258590 | Msa1375380 | 0.817677 | 2.912188e-52 | -8.615850e-47 |
| Msa0258590 | Msa1382790 | 0.802499 | 5.451002e-49 | -8.615850e-47 |
| Msa0258590 | Msa1394380 | 0.807248 | 5.546774e-50 | -8.615850e-47 |
| Msa0258590 | Msa1418850 | 0.800174 | 1.631351e-48 | -8.615850e-47 |
| Msa0258590 | Msa1448560 | 0.810019 | 1.419262e-50 | -8.615850e-47 |
| Msa0258590 | Msa1463900 | 0.814302 | 1.651008e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0258590 | MtrunA17_Chr2g0321351 | 85.802 | 324 | 3 | 2 | 1 | 281 | 1 | 324 | 0.0 | 563 |
| Msa0258590 | MtrunA17_Chr2g0321351 | 58.908 | 348 | 94 | 7 | 428 | 728 | 1 | 346 | 8.12e-132 | 394 |
| Msa0258590 | MtrunA17_Chr2g0321351 | 52.857 | 70 | 27 | 3 | 294 | 358 | 1 | 69 | 6.73e-12 | 67.8 |
| Msa0258590 | MtrunA17_Chr3g0136021 | 61.359 | 471 | 105 | 6 | 294 | 729 | 1 | 429 | 0.0 | 551 |
| Msa0258590 | MtrunA17_Chr3g0136021 | 61.747 | 332 | 73 | 6 | 1 | 282 | 80 | 407 | 2.52e-132 | 398 |
| Msa0258590 | MtrunA17_Chr3g0136021 | 72.973 | 74 | 14 | 1 | 293 | 360 | 79 | 152 | 2.47e-23 | 103 |
| Msa0258590 | MtrunA17_Chr3g0136021 | 51.190 | 84 | 27 | 3 | 1 | 74 | 1 | 80 | 1.54e-13 | 73.6 |
| Msa0258590 | MtrunA17_Chr4g0026421 | 62.976 | 289 | 62 | 4 | 37 | 281 | 36 | 323 | 4.77e-121 | 366 |
| Msa0258590 | MtrunA17_Chr4g0026421 | 54.983 | 291 | 91 | 4 | 477 | 728 | 56 | 345 | 3.12e-104 | 323 |
| Msa0258590 | MtrunA17_Chr2g0321341 | 43.151 | 292 | 123 | 3 | 476 | 727 | 49 | 337 | 1.55e-76 | 249 |
| Msa0258590 | MtrunA17_Chr2g0321341 | 41.980 | 293 | 123 | 4 | 34 | 281 | 26 | 316 | 9.49e-75 | 245 |
| Msa0258590 | MtrunA17_Chr1g0178741 | 41.695 | 295 | 124 | 3 | 33 | 279 | 82 | 376 | 8.20e-73 | 242 |
| Msa0258590 | MtrunA17_Chr1g0178741 | 38.176 | 296 | 138 | 5 | 476 | 728 | 106 | 399 | 1.02e-62 | 215 |
| Msa0258590 | MtrunA17_Chr1g0178721 | 41.695 | 295 | 124 | 3 | 34 | 280 | 58 | 352 | 6.28e-72 | 239 |
| Msa0258590 | MtrunA17_Chr1g0178721 | 38.776 | 294 | 136 | 4 | 476 | 726 | 81 | 373 | 3.69e-65 | 221 |
| Msa0258590 | MtrunA17_Chr1g0171181 | 36.735 | 294 | 108 | 6 | 34 | 279 | 26 | 289 | 1.09e-51 | 182 |
| Msa0258590 | MtrunA17_Chr1g0171181 | 32.653 | 294 | 124 | 7 | 477 | 727 | 50 | 312 | 2.11e-42 | 156 |
| Msa0258590 | MtrunA17_Chr2g0321361 | 68.421 | 114 | 26 | 1 | 300 | 413 | 6 | 109 | 7.26e-42 | 149 |
| Msa0258590 | MtrunA17_Chr2g0321361 | 76.471 | 68 | 10 | 1 | 293 | 354 | 58 | 125 | 1.96e-25 | 103 |
| Msa0258590 | MtrunA17_Chr2g0321361 | 52.459 | 122 | 36 | 4 | 398 | 498 | 19 | 139 | 6.31e-22 | 93.2 |
| Msa0258590 | MtrunA17_Chr2g0321361 | 54.444 | 90 | 30 | 4 | 1 | 84 | 59 | 143 | 1.48e-19 | 86.3 |
| Msa0258590 | MtrunA17_Chr2g0321361 | 56.250 | 64 | 14 | 2 | 434 | 493 | 6 | 59 | 6.68e-11 | 61.6 |
| Msa0258590 | MtrunA17_Chr2g0321371 | 70.149 | 67 | 20 | 0 | 660 | 726 | 1 | 67 | 4.47e-28 | 107 |
| Msa0258590 | MtrunA17_Chr2g0321371 | 78.723 | 47 | 10 | 0 | 235 | 281 | 1 | 47 | 4.23e-20 | 84.7 |
| Msa0258590 | MtrunA17_Chr4g0029971 | 26.984 | 315 | 150 | 10 | 47 | 286 | 122 | 431 | 2.93e-20 | 94.7 |
| Msa0258590 | MtrunA17_Chr4g0029971 | 25.079 | 315 | 168 | 11 | 477 | 726 | 133 | 444 | 9.80e-19 | 90.1 |
| Msa0258590 | MtrunA17_Chr7g0263721 | 24.214 | 318 | 163 | 7 | 46 | 288 | 153 | 467 | 1.35e-19 | 92.8 |
| Msa0258590 | MtrunA17_Chr7g0263721 | 21.474 | 312 | 171 | 9 | 477 | 719 | 165 | 471 | 2.51e-15 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0258590 | AT3G44510.2 | 52.688 | 279 | 85 | 4 | 49 | 280 | 8 | 286 | 3.87e-93 | 293 |
| Msa0258590 | AT3G44510.2 | 50.680 | 294 | 102 | 5 | 477 | 728 | 17 | 309 | 7.10e-90 | 285 |
| Msa0258590 | AT1G08310.1 | 49.823 | 283 | 95 | 4 | 42 | 280 | 3 | 282 | 2.89e-85 | 272 |
| Msa0258590 | AT1G08310.1 | 45.364 | 302 | 124 | 3 | 464 | 727 | 6 | 304 | 7.89e-78 | 253 |
| Msa0258590 | AT1G08310.2 | 49.301 | 286 | 95 | 4 | 42 | 280 | 3 | 285 | 1.06e-84 | 271 |
| Msa0258590 | AT1G08310.2 | 44.918 | 305 | 124 | 3 | 464 | 727 | 6 | 307 | 3.89e-77 | 251 |
| Msa0258590 | AT2G36290.1 | 42.759 | 290 | 118 | 3 | 39 | 280 | 47 | 336 | 4.46e-74 | 244 |
| Msa0258590 | AT2G36290.1 | 40.136 | 294 | 132 | 4 | 476 | 726 | 65 | 357 | 1.02e-65 | 222 |
| Msa0258590 | AT2G36290.2 | 42.759 | 290 | 118 | 3 | 39 | 280 | 33 | 322 | 4.86e-74 | 244 |
| Msa0258590 | AT2G36290.2 | 40.136 | 294 | 132 | 4 | 476 | 726 | 51 | 343 | 1.51e-65 | 221 |
| Msa0258590 | AT3G48410.1 | 42.177 | 294 | 121 | 4 | 44 | 289 | 67 | 359 | 1.38e-72 | 241 |
| Msa0258590 | AT3G48410.1 | 39.935 | 308 | 140 | 5 | 464 | 728 | 68 | 373 | 2.19e-68 | 230 |
| Msa0258590 | AT3G48410.2 | 42.177 | 294 | 121 | 4 | 44 | 289 | 109 | 401 | 4.08e-72 | 241 |
| Msa0258590 | AT3G48410.2 | 34.739 | 403 | 202 | 10 | 383 | 728 | 17 | 415 | 9.88e-68 | 229 |
| Msa0258590 | AT1G74300.1 | 39.796 | 294 | 129 | 3 | 34 | 279 | 29 | 322 | 2.52e-68 | 228 |
| Msa0258590 | AT1G74300.1 | 35.948 | 306 | 152 | 4 | 464 | 726 | 40 | 344 | 3.58e-61 | 209 |
| Msa0258590 | AT5G22460.2 | 40.000 | 280 | 123 | 3 | 45 | 279 | 37 | 316 | 4.50e-66 | 222 |
| Msa0258590 | AT5G22460.2 | 40.893 | 291 | 131 | 3 | 477 | 727 | 50 | 339 | 1.55e-62 | 213 |
| Msa0258590 | AT5G22460.3 | 40.000 | 280 | 123 | 3 | 45 | 279 | 37 | 316 | 4.50e-66 | 222 |
| Msa0258590 | AT5G22460.3 | 40.893 | 291 | 131 | 3 | 477 | 727 | 50 | 339 | 1.55e-62 | 213 |
| Msa0258590 | AT5G22460.1 | 40.000 | 280 | 123 | 3 | 45 | 279 | 37 | 316 | 4.50e-66 | 222 |
| Msa0258590 | AT5G22460.1 | 40.893 | 291 | 131 | 3 | 477 | 727 | 50 | 339 | 1.55e-62 | 213 |
| Msa0258590 | AT3G54240.1 | 38.658 | 313 | 139 | 5 | 45 | 309 | 41 | 348 | 6.21e-65 | 219 |
| Msa0258590 | AT3G54240.1 | 36.519 | 293 | 141 | 6 | 477 | 726 | 54 | 344 | 2.74e-54 | 191 |
| Msa0258590 | AT1G74280.1 | 36.610 | 295 | 139 | 3 | 34 | 280 | 46 | 340 | 6.65e-62 | 212 |
| Msa0258590 | AT1G74280.1 | 36.721 | 305 | 145 | 5 | 469 | 726 | 58 | 361 | 5.45e-60 | 207 |
| Msa0258590 | AT3G44510.3 | 50.000 | 202 | 58 | 2 | 49 | 207 | 8 | 209 | 7.50e-62 | 207 |
| Msa0258590 | AT3G44510.3 | 47.423 | 194 | 63 | 3 | 477 | 632 | 17 | 209 | 2.39e-49 | 173 |
| Msa0258590 | AT1G74290.1 | 36.093 | 302 | 138 | 7 | 39 | 288 | 51 | 349 | 1.14e-58 | 203 |
| Msa0258590 | AT1G74290.1 | 35.974 | 303 | 143 | 5 | 469 | 722 | 58 | 358 | 1.17e-56 | 198 |
| Msa0258590 | AT3G44510.1 | 53.333 | 180 | 66 | 3 | 119 | 280 | 1 | 180 | 3.50e-58 | 197 |
| Msa0258590 | AT3G44510.1 | 47.059 | 204 | 78 | 4 | 554 | 728 | 1 | 203 | 3.24e-51 | 178 |
| Msa0258590 | AT3G44510.5 | 53.333 | 180 | 66 | 3 | 119 | 280 | 1 | 180 | 3.50e-58 | 197 |
| Msa0258590 | AT3G44510.5 | 47.059 | 204 | 78 | 4 | 554 | 728 | 1 | 203 | 3.24e-51 | 178 |
| Msa0258590 | AT3G44510.4 | 53.333 | 180 | 66 | 3 | 119 | 280 | 1 | 180 | 3.50e-58 | 197 |
| Msa0258590 | AT3G44510.4 | 47.059 | 204 | 78 | 4 | 554 | 728 | 1 | 203 | 3.24e-51 | 178 |
| Msa0258590 | AT3G03230.1 | 39.041 | 292 | 126 | 7 | 41 | 285 | 29 | 315 | 1.07e-57 | 199 |
| Msa0258590 | AT3G03230.1 | 36.964 | 303 | 139 | 8 | 468 | 724 | 33 | 329 | 2.47e-54 | 190 |
| Msa0258590 | AT1G74300.2 | 43.519 | 216 | 106 | 2 | 80 | 279 | 8 | 223 | 1.32e-57 | 196 |
| Msa0258590 | AT1G74300.2 | 37.805 | 246 | 125 | 3 | 508 | 726 | 1 | 245 | 2.82e-52 | 182 |
| Msa0258590 | AT3G03240.1 | 38.667 | 300 | 130 | 8 | 41 | 293 | 29 | 321 | 1.01e-55 | 194 |
| Msa0258590 | AT3G03240.1 | 36.928 | 306 | 142 | 8 | 465 | 724 | 30 | 330 | 1.65e-54 | 191 |
| Msa0258590 | AT1G08310.3 | 47.549 | 204 | 63 | 3 | 42 | 201 | 3 | 206 | 5.40e-54 | 186 |
| Msa0258590 | AT1G08310.3 | 42.640 | 197 | 75 | 2 | 464 | 622 | 6 | 202 | 6.25e-42 | 153 |
| Msa0258590 | AT5G02970.1 | 30.147 | 136 | 79 | 3 | 477 | 598 | 171 | 304 | 6.76e-13 | 72.4 |
| Msa0258590 | AT3G09690.1 | 33.333 | 108 | 58 | 2 | 477 | 570 | 174 | 281 | 2.81e-12 | 70.5 |
| Msa0258590 | AT3G09690.2 | 33.333 | 108 | 58 | 2 | 477 | 570 | 174 | 281 | 2.81e-12 | 70.5 |
Find 127 sgRNAs with CRISPR-Local
Find 494 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAAAGTTCAATTCATATT+TGG | 0.165850 | 2_2:-55062645 | Msa0258590:CDS |
| TTGTATGTTGCTTTGTCTTT+AGG | 0.165946 | 2_2:+55064330 | None:intergenic |
| GAAGAAGTTCATTTCATATT+TGG | 0.167922 | 2_2:-55055421 | Msa0258590:CDS |
| CAAATTTGTGCAGGCTTTAT+AGG | 0.207758 | 2_2:-55056076 | Msa0258590:intron |
| GAACTCCAAAGATTTGTTTC+AGG | 0.209896 | 2_2:-55062592 | Msa0258590:CDS |
| TTCAGTGAACGTTTGGGATT+TGG | 0.248061 | 2_2:+55063653 | None:intergenic |
| TTATGTAATTGGAATCTCTA+TGG | 0.257003 | 2_2:-55056248 | Msa0258590:CDS |
| ATAGGAGGAGACTTATTAAA+TGG | 0.259929 | 2_2:-55063054 | Msa0258590:CDS |
| AATGGATTGCTTAGCTTCAT+TGG | 0.294401 | 2_2:+55062676 | None:intergenic |
| CTTGCTGATCAGTTGCAAAT+TGG | 0.297722 | 2_2:-55063605 | Msa0258590:CDS |
| CATGATTGGAGGGTAGCTTT+TGG | 0.304381 | 2_2:-55062715 | Msa0258590:CDS |
| GCCAATTGCACAATGGTTCT+TGG | 0.319357 | 2_2:+55056886 | None:intergenic |
| GCTTCCCTGAAACAAATCTT+TGG | 0.320235 | 2_2:+55062587 | None:intergenic |
| TTTACACTCTTTGTGATGAT+TGG | 0.321564 | 2_2:-55055505 | Msa0258590:CDS |
| GATGATTGGAGGGTGGCTTT+TGG | 0.326255 | 2_2:-55055491 | Msa0258590:CDS |
| GGAATTATAATAGAAGAATT+AGG | 0.334830 | 2_2:-55056397 | Msa0258590:CDS |
| CAATATGACCGAGCTGGATA+TGG | 0.334886 | 2_2:-55056361 | Msa0258590:CDS |
| GTTTGATAAGAGAGGACTAT+AGG | 0.339200 | 2_2:-55063072 | Msa0258590:CDS |
| AACCAACTTGTCCACATAAC+AGG | 0.345483 | 2_2:+55056047 | None:intergenic |
| CTGGCTGATCAGCTTCAAAT+TGG | 0.346880 | 2_2:-55056280 | Msa0258590:CDS |
| AATGGATCCCTTGTCTTCAT+TGG | 0.348300 | 2_2:+55055452 | None:intergenic |
| ACCAAGAACCATTGTGCAAT+TGG | 0.348784 | 2_2:-55056887 | Msa0258590:CDS |
| CTGACTTGTAGAACAAGTTA+AGG | 0.363405 | 2_2:-55055541 | Msa0258590:intron |
| CTATCTCTGAGTCTGATTCT+TGG | 0.370091 | 2_2:+55061130 | None:intergenic |
| CCATCTCTAAGTCTAATTCT+TGG | 0.373619 | 2_2:+55064384 | None:intergenic |
| TCTGTTGAATCATCTTGATT+TGG | 0.379046 | 2_2:+55064426 | None:intergenic |
| TTCATTGAACAGTTGGGGTT+CGG | 0.379595 | 2_2:+55056328 | None:intergenic |
| GACTTATTAAATGGGCACTA+TGG | 0.391046 | 2_2:-55063045 | Msa0258590:CDS |
| TTGTATCCAAGGCAGCTTCT+TGG | 0.391152 | 2_2:+55060792 | None:intergenic |
| TTGTTACCTTTGAAAACATT+GGG | 0.391728 | 2_2:+55062888 | None:intergenic |
| TCGATACACTTCGGCATGAT+TGG | 0.399515 | 2_2:-55062729 | Msa0258590:CDS |
| CTATGGGTTCATGTGCTACT+TGG | 0.412153 | 2_2:-55056231 | Msa0258590:CDS |
| AAAATCAAATGGCCACCATC+TGG | 0.415073 | 2_2:+55055314 | None:intergenic |
| CAATATGATAGAGCTGGATA+TGG | 0.424304 | 2_2:-55063686 | Msa0258590:intron |
| AACTCCAAAGATTTGTTTCA+GGG | 0.434253 | 2_2:-55062591 | Msa0258590:CDS |
| TTTGTTACCTTTGAAAACAT+TGG | 0.435524 | 2_2:+55062887 | None:intergenic |
| ACCCACCAATGCAATAGTTT+AGG | 0.436363 | 2_2:+55063007 | None:intergenic |
| CACCTTGCTTACATTGAGAA+AGG | 0.439193 | 2_2:-55061103 | Msa0258590:CDS |
| TTATGTAATTGGAGTCTCAA+TGG | 0.444780 | 2_2:-55063573 | Msa0258590:CDS |
| TATGTAATTGGAGTCTCAAT+GGG | 0.457706 | 2_2:-55063572 | Msa0258590:CDS |
| AAAGCATGTTGATTCAAAAG+AGG | 0.460907 | 2_2:-55056914 | Msa0258590:CDS |
| CAAGAATCAGACTCAGAGAT+AGG | 0.461251 | 2_2:-55061129 | Msa0258590:CDS |
| AAAGCATGATGATTCAAAAG+AGG | 0.463577 | 2_2:-55061158 | Msa0258590:CDS |
| CATTGAGAAAGGCTTCCTTA+AGG | 0.465819 | 2_2:-55061092 | Msa0258590:CDS |
| TATGTAATTGGAATCTCTAT+GGG | 0.468509 | 2_2:-55056247 | Msa0258590:CDS |
| TTCTGAGTCTGATGAACTTG+TGG | 0.469875 | 2_2:+55061010 | None:intergenic |
| ACACTCTTTGTGATGATTGG+AGG | 0.473616 | 2_2:-55055502 | Msa0258590:CDS |
| GAACTTCTTCTGTGAGGGAA+TGG | 0.474482 | 2_2:+55055434 | None:intergenic |
| TCCTGTGTCTGATGAACTTG+TGG | 0.474860 | 2_2:+55057066 | None:intergenic |
| TCCTGTGTCTGATGAACTTG+TGG | 0.474860 | 2_2:+55061330 | None:intergenic |
| AAAGCATGATGATTCAAAAG+AGG | 0.479998 | 2_2:-55060820 | Msa0258590:CDS |
| TATAGATGGCCATCTCTCCC+TGG | 0.485973 | 2_2:-55063097 | Msa0258590:intron |
| CCTTATAGCATAAAATCAAA+TGG | 0.486498 | 2_2:+55055303 | None:intergenic |
| AACAAATCTTTGGAGTTCAG+AGG | 0.491998 | 2_2:+55062597 | None:intergenic |
| CACTCTTTGTGATGATTGGA+GGG | 0.493499 | 2_2:-55055501 | Msa0258590:CDS |
| AGTACTTGACATTCAAGAAC+TGG | 0.494855 | 2_2:-55056299 | Msa0258590:CDS |
| TGACTTGTAGAACAAGTTAA+GGG | 0.497673 | 2_2:-55055540 | Msa0258590:intron |
| CAATGGGTTCATATGCTACC+TGG | 0.500367 | 2_2:-55063556 | Msa0258590:CDS |
| TTGTTTCAGGGAAGCTGCCA+TGG | 0.501410 | 2_2:-55062579 | Msa0258590:CDS |
| GAACTTTGTTTGTGAGGGAA+TGG | 0.502659 | 2_2:+55062658 | None:intergenic |
| CATAATATTGTATCCAAGGT+AGG | 0.510234 | 2_2:+55055342 | None:intergenic |
| TCCTCTCTTATCAAACTCCC+AGG | 0.511292 | 2_2:+55063079 | None:intergenic |
| TCTACATACAGGACAGGCTA+AGG | 0.514752 | 2_2:-55062765 | Msa0258590:intron |
| ACTTCATGATATTGTATCCA+TGG | 0.516209 | 2_2:+55062562 | None:intergenic |
| GTCCTAAACTATTGCATTGG+TGG | 0.516994 | 2_2:-55063009 | Msa0258590:CDS |
| ATAGGAGGAAACCTGTTATG+TGG | 0.532085 | 2_2:-55056058 | Msa0258590:CDS |
| TCAAAGGCAATAGTAACTGA+AGG | 0.536065 | 2_2:+55055972 | None:intergenic |
| TAGGAGGAGACTTATTAAAT+GGG | 0.536162 | 2_2:-55063053 | Msa0258590:CDS |
| AGACACAGGAAATCTTCAAA+AGG | 0.536888 | 2_2:-55057053 | Msa0258590:CDS |
| ATACACTTCGGCATGATTGG+AGG | 0.545235 | 2_2:-55062726 | Msa0258590:CDS |
| GTCTAAAATATTTGCCACAC+AGG | 0.546438 | 2_2:-55063529 | Msa0258590:intron |
| CACTTTCTCCATATCCAGCT+CGG | 0.547905 | 2_2:+55056353 | None:intergenic |
| TTTGAAAACATTGGGAACCC+TGG | 0.548162 | 2_2:+55062896 | None:intergenic |
| ATTTGTGCAGGCTTTATAGG+AGG | 0.548342 | 2_2:-55056073 | Msa0258590:intron |
| ATCAAACTCCCAGGGAGAGA+TGG | 0.548476 | 2_2:+55063088 | None:intergenic |
| TGATAAGAGAGGACTATAGG+AGG | 0.553988 | 2_2:-55063069 | Msa0258590:CDS |
| TACAAGATCATCATTGTGCA+TGG | 0.554603 | 2_2:-55056826 | Msa0258590:intron |
| AGTTCATTTCATATTTGGCA+AGG | 0.555114 | 2_2:-55055416 | Msa0258590:CDS |
| ATAGATGGCCATCTCTCCCT+GGG | 0.562707 | 2_2:-55063096 | Msa0258590:intron |
| ACTTCATAATATTGTATCCA+AGG | 0.563211 | 2_2:+55055338 | None:intergenic |
| ACTTCATGATCTTGTATCCA+AGG | 0.564492 | 2_2:+55060781 | None:intergenic |
| AGTTCAATTCATATTTGGCA+AGG | 0.564663 | 2_2:-55062640 | Msa0258590:CDS |
| AGCAAGTTCTTCAATGTCGA+GGG | 0.567140 | 2_2:+55063622 | None:intergenic |
| AACCTGTTATGTGGACAAGT+TGG | 0.568337 | 2_2:-55056049 | Msa0258590:CDS |
| ACTGTCCTAGACTATTGCAT+TGG | 0.570444 | 2_2:-55056016 | Msa0258590:CDS |
| TACAAGATCATCATTGTGCA+TGG | 0.570692 | 2_2:-55064312 | Msa0258590:intron |
| GAAATGAACTTCTTCTGTGA+GGG | 0.571740 | 2_2:+55055429 | None:intergenic |
| ACATACCAATGCAATAGTCT+AGG | 0.572154 | 2_2:+55056011 | None:intergenic |
| TGAATTGAACTTTGTTTGTG+AGG | 0.574095 | 2_2:+55062652 | None:intergenic |
| ACAAATCTTTGGAGTTCAGA+GGG | 0.576859 | 2_2:+55062598 | None:intergenic |
| ATTATGTAGAGGTTTCTGTC+AGG | 0.578443 | 2_2:-55064603 | Msa0258590:intron |
| CCCTGGGAGTTTGATAAGAG+AGG | 0.579683 | 2_2:-55063080 | Msa0258590:CDS |
| TACACTTCGGCATGATTGGA+GGG | 0.585799 | 2_2:-55062725 | Msa0258590:CDS |
| ACTGTCCTAAACTATTGCAT+TGG | 0.587715 | 2_2:-55063012 | Msa0258590:CDS |
| GTGTAAACTACTTTCCTCAC+AGG | 0.589335 | 2_2:-55056204 | Msa0258590:intron |
| GAATTGAACTTTGTTTGTGA+GGG | 0.593434 | 2_2:+55062653 | None:intergenic |
| CAGACACGTAAATTATGTAG+AGG | 0.593922 | 2_2:-55064614 | Msa0258590:CDS |
| CATCTTGCTTATGTTGAGAG+AGG | 0.595506 | 2_2:-55064357 | Msa0258590:CDS |
| CAAAGGCAATAGTAACTGAA+GGG | 0.596462 | 2_2:+55055973 | None:intergenic |
| TCTTTGTGATGATTGGAGGG+TGG | 0.598185 | 2_2:-55055498 | Msa0258590:CDS |
| CAGCAAGTTCTTCAATGTCG+AGG | 0.598386 | 2_2:+55063621 | None:intergenic |
| TTTGTGCAATATGACCGAGC+TGG | 0.605095 | 2_2:-55056367 | Msa0258590:CDS |
| AGCCTTTCTCAATGTAAGCA+AGG | 0.608357 | 2_2:+55061101 | None:intergenic |
| CCAAGAATTAGACTTAGAGA+TGG | 0.610551 | 2_2:-55064384 | Msa0258590:CDS |
| TGTTGAGAGAGGCTTCCCTA+AGG | 0.612247 | 2_2:-55056860 | Msa0258590:CDS |
| TATTATGAAGTTCCAGATGG+TGG | 0.618326 | 2_2:-55055326 | Msa0258590:CDS |
| TTTCAGACAAAGGTTCATGT+GGG | 0.619109 | 2_2:-55060858 | Msa0258590:intron |
| CTACATACAGGACAGGCTAA+GGG | 0.619374 | 2_2:-55062764 | Msa0258590:intron |
| CAATTGGCTTATGTTGAGAG+AGG | 0.619557 | 2_2:-55056871 | Msa0258590:CDS |
| AGTATTGTAATTTACCTGTG+AGG | 0.619977 | 2_2:+55056190 | None:intergenic |
| CCTCTCTTATCAAACTCCCA+GGG | 0.621765 | 2_2:+55063080 | None:intergenic |
| CAAGATCATGAAGTTCCAGA+TGG | 0.628232 | 2_2:-55060772 | Msa0258590:intron |
| TGAAATGAACTTCTTCTGTG+AGG | 0.628830 | 2_2:+55055428 | None:intergenic |
| GTAGAACAAGTTAAGGGACC+AGG | 0.631195 | 2_2:-55055534 | Msa0258590:intron |
| TCCTAAACTATTGCATTGGT+GGG | 0.631464 | 2_2:-55063008 | Msa0258590:CDS |
| CAATATTATGAAGTTCCAGA+TGG | 0.634353 | 2_2:-55055329 | Msa0258590:CDS |
| AATTCGATCCAATGAAGACA+AGG | 0.634825 | 2_2:-55055460 | Msa0258590:CDS |
| CAATATCATGAAGTTCCAGA+TGG | 0.635922 | 2_2:-55062553 | Msa0258590:intron |
| CTTATAACTGAAAATCAACA+AGG | 0.641539 | 2_2:-55064638 | Msa0258590:CDS |
| AATGTCTTTATTTACCTGTG+TGG | 0.648135 | 2_2:+55063515 | None:intergenic |
| GAATCAGACTCAGAGATAGG+AGG | 0.649374 | 2_2:-55061126 | Msa0258590:CDS |
| TCCACAAGTTCATCAGACAC+AGG | 0.661939 | 2_2:-55057067 | Msa0258590:CDS |
| TCCACAAGTTCATCAGACAC+AGG | 0.661939 | 2_2:-55061331 | Msa0258590:CDS |
| ATTGGTGGGTGACTCAAAAG+TGG | 0.668917 | 2_2:-55062994 | Msa0258590:CDS |
| AACATAAGCCAATTGCACAA+TGG | 0.677272 | 2_2:+55056879 | None:intergenic |
| ATTCGATCCAATGAAGACAA+GGG | 0.687219 | 2_2:-55055459 | Msa0258590:CDS |
| ATTGGTATGTGACTCAAATG+TGG | 0.688499 | 2_2:-55055998 | Msa0258590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATTCATTTTTCTTTA+TGG | - | chr2_2:55055451-55055470 | Msa0258590:CDS | 10.0% |
| !! | AAAATAAATAATGAAGTTTA+TGG | + | chr2_2:55060364-55060383 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAAAAGGA+TGG | - | chr2_2:55061118-55061137 | Msa0258590:CDS | 10.0% |
| !! | ATCAAAATAATAATAATCAA+TGG | - | chr2_2:55061748-55061767 | Msa0258590:intron | 10.0% |
| !!! | TTTTTCTTTATGGTTTTATT+AGG | - | chr2_2:55055461-55055480 | Msa0258590:CDS | 15.0% |
| !!! | TTTTCTTTATGGTTTTATTA+GGG | - | chr2_2:55055462-55055481 | Msa0258590:CDS | 15.0% |
| !!! | TTTTTAGTAAACAATCATTT+TGG | + | chr2_2:55056732-55056751 | None:intergenic | 15.0% |
| !!! | TTAATTTCAATCATTTTTGA+AGG | - | chr2_2:55057115-55057134 | Msa0258590:CDS | 15.0% |
| !! | TTAATATGTTTATTGTTAAC+AGG | - | chr2_2:55057654-55057673 | Msa0258590:intron | 15.0% |
| !!! | AAAATTGCTAAACTTTTATA+TGG | + | chr2_2:55057873-55057892 | Msa0258600:CDS | 15.0% |
| !!! | AAGAAATTCATTTTAGTTTA+TGG | + | chr2_2:55057948-55057967 | Msa0258600:CDS | 15.0% |
| !! | AAACTAAAATGAATTTCTTA+AGG | - | chr2_2:55057949-55057968 | Msa0258590:intron | 15.0% |
| !! | ATCTATTAAATTTCCAAAAA+TGG | + | chr2_2:55059936-55059955 | None:intergenic | 15.0% |
| !! | TGACATTGAAATATTAAAAT+AGG | + | chr2_2:55061677-55061696 | None:intergenic | 15.0% |
| !!! | GAAGAAATTGATTTTTTTTA+GGG | - | chr2_2:55062321-55062340 | Msa0258590:intron | 15.0% |
| !!! | TAATATTAATTTTTAAGCAC+TGG | + | chr2_2:55064250-55064269 | None:intergenic | 15.0% |
| !! | AGTGCTTAAAAATTAATATT+AGG | - | chr2_2:55064249-55064268 | Msa0258590:intron | 15.0% |
| !! | AGATTAAGTTAAATTACTTG+GGG | + | chr2_2:55055672-55055691 | None:intergenic | 20.0% |
| !! | GAGATTAAGTTAAATTACTT+GGG | + | chr2_2:55055673-55055692 | None:intergenic | 20.0% |
| !! | AGAGATTAAGTTAAATTACT+TGG | + | chr2_2:55055674-55055693 | None:intergenic | 20.0% |
| !!! | GAATTGAACATTTTATGTTT+TGG | - | chr2_2:55055705-55055724 | Msa0258590:intron | 20.0% |
| !! | ATAGAAAGAAATTCTTTAGT+AGG | - | chr2_2:55055933-55055952 | Msa0258590:CDS | 20.0% |
| !! | TTAGAGTGAAAATGAAAATT+TGG | - | chr2_2:55055975-55055994 | Msa0258590:CDS | 20.0% |
| !!! | ATTTCTAATTTTTTCCACTT+TGG | - | chr2_2:55056455-55056474 | Msa0258590:intron | 20.0% |
| !! | AAATTAACGAATTTCTCAAA+AGG | + | chr2_2:55057102-55057121 | None:intergenic | 20.0% |
| !! | AACAAAGTTCAATTCATATT+TGG | - | chr2_2:55057279-55057298 | Msa0258590:intron | 20.0% |
| !! | CTTACTCATTTATTCATTAT+TGG | - | chr2_2:55057541-55057560 | Msa0258590:intron | 20.0% |
| !!! | TTATTGTTAACAGGTTTTTT+AGG | - | chr2_2:55057663-55057682 | Msa0258590:intron | 20.0% |
| !! | AGCACAAAAAAAATTACATT+TGG | - | chr2_2:55057807-55057826 | Msa0258590:intron | 20.0% |
| !! | AGTTAATTTAGTTGTTATAG+TGG | + | chr2_2:55058375-55058394 | Msa0258600:intron | 20.0% |
| !!! | ATTTGTTGAAAATCTTGTAA+AGG | + | chr2_2:55058450-55058469 | Msa0258600:intron | 20.0% |
| !!! | AAACCTTGATAACAAAAAAA+GGG | + | chr2_2:55058727-55058746 | Msa0258600:three_prime_UTR | 20.0% |
| !!! | AAAACCTTGATAACAAAAAA+AGG | + | chr2_2:55058728-55058747 | Msa0258600:three_prime_UTR | 20.0% |
| !!! | CATTTGATTTTATGCTATAA+GGG | - | chr2_2:55059179-55059198 | Msa0258590:intron | 20.0% |
| !!! | GCATAAATTCTTATTTTCAT+GGG | + | chr2_2:55059868-55059887 | None:intergenic | 20.0% |
| !!! | AGCATAAATTCTTATTTTCA+TGG | + | chr2_2:55059869-55059888 | None:intergenic | 20.0% |
| !! | TTTAATAGATGCTATGAAAA+AGG | - | chr2_2:55059946-55059965 | Msa0258590:intron | 20.0% |
| !!! | TATTTTGAAATTCTTAAAGC+TGG | + | chr2_2:55060412-55060431 | None:intergenic | 20.0% |
| !! | TTTAAGAATTTCAAAATACC+AGG | - | chr2_2:55060414-55060433 | Msa0258590:intron | 20.0% |
| !!! | ACAATCAAATTTTCCATATA+TGG | - | chr2_2:55060685-55060704 | Msa0258590:intron | 20.0% |
| !!! | CTTTTAAAGCAAGAATTATA+TGG | - | chr2_2:55060756-55060775 | Msa0258590:intron | 20.0% |
| !! | AAAAAACTTAGCAAATGTTA+GGG | - | chr2_2:55061307-55061326 | Msa0258590:intron | 20.0% |
| !! | ATTTCTATCTATCATATTAG+TGG | - | chr2_2:55061386-55061405 | Msa0258590:CDS | 20.0% |
| !! | ATTATGTTATACATAAGTAG+TGG | + | chr2_2:55061510-55061529 | None:intergenic | 20.0% |
| !! | ATAACAATATAACATGTGAA+AGG | - | chr2_2:55061633-55061652 | Msa0258590:intron | 20.0% |
| !! | TAACAATATAACATGTGAAA+GGG | - | chr2_2:55061634-55061653 | Msa0258590:intron | 20.0% |
| !!! | TCGAAATTTTTTCTTCTTTT+AGG | - | chr2_2:55062072-55062091 | Msa0258590:intron | 20.0% |
| !! | AAAATCAATCAATCAATCAA+AGG | + | chr2_2:55062269-55062288 | None:intergenic | 20.0% |
| !!! | ATTGATTGATTGATTTTTGA+GGG | - | chr2_2:55062272-55062291 | Msa0258590:intron | 20.0% |
| !!! | CGAAGAAATTGATTTTTTTT+AGG | - | chr2_2:55062320-55062339 | Msa0258590:intron | 20.0% |
| !! | AAAATAACACATATGGAATA+TGG | + | chr2_2:55062509-55062528 | None:intergenic | 20.0% |
| !! | AACATGTAAAATAACACATA+TGG | + | chr2_2:55062516-55062535 | None:intergenic | 20.0% |
| !!! | TGTTATTTTACATGTTTACT+TGG | - | chr2_2:55062520-55062539 | Msa0258590:intron | 20.0% |
| !! | TTATCAAGGAATATCTATAA+AGG | + | chr2_2:55062694-55062713 | None:intergenic | 20.0% |
| !!! | CATAGCATTTTCATTTTTTT+TGG | + | chr2_2:55063186-55063205 | None:intergenic | 20.0% |
| !! | GGAATTATAATAGAAGAATT+AGG | - | chr2_2:55063527-55063546 | Msa0258590:intron | 20.0% |
| !!! | CAAAACATCAATATCATTTT+TGG | + | chr2_2:55063998-55064017 | None:intergenic | 20.0% |
| !! | ATGACTCTTTAGTATTTATT+TGG | - | chr2_2:55064127-55064146 | Msa0258590:intron | 20.0% |
| !! | ATGTTTAATCAGATTTCATA+TGG | + | chr2_2:55064286-55064305 | None:intergenic | 20.0% |
| !!! | CATTTGATTTTATGCTATAA+GGG | - | chr2_2:55059179-55059198 | Msa0258590:intron | 20.0% |
| ! | CTTATAACTGAAAATCAACA+AGG | - | chr2_2:55055286-55055305 | Msa0258590:CDS | 25.0% |
| !! | TTCAACAGATGATTTTTCTA+TGG | - | chr2_2:55055512-55055531 | Msa0258590:CDS | 25.0% |
| !!! | CATGAATTTAGAAGTGTTTA+TGG | - | chr2_2:55055819-55055838 | Msa0258590:intron | 25.0% |
| ! | TGGTTAAAGTCAAATGTTTA+TGG | - | chr2_2:55055839-55055858 | Msa0258590:intron | 25.0% |
| !! | CTTTGAAGAAATGAAACAAT+TGG | - | chr2_2:55055998-55056017 | Msa0258590:CDS | 25.0% |
| ! | TAGGAATTGATAGATGAATT+AGG | - | chr2_2:55056202-55056221 | Msa0258590:intron | 25.0% |
| ! | GACTCCAATTACATAAAAAT+TGG | + | chr2_2:55056347-55056366 | None:intergenic | 25.0% |
| ! | ATAATATAACTAAGCCAAAG+TGG | + | chr2_2:55056472-55056491 | None:intergenic | 25.0% |
| ! | AGGAAAATGACTTACATTTA+AGG | + | chr2_2:55056523-55056542 | None:intergenic | 25.0% |
| ! | CGATATATTCAGGAATTATA+AGG | + | chr2_2:55056543-55056562 | None:intergenic | 25.0% |
| ! | TTTGCAATTTCGATATATTC+AGG | + | chr2_2:55056553-55056572 | None:intergenic | 25.0% |
| !!! | TGTTTTCTTTTAGGAATTCA+TGG | - | chr2_2:55056587-55056606 | Msa0258590:intron | 25.0% |
| !!! | TCATTTTTGTTGAAGAATGT+TGG | + | chr2_2:55056986-55057005 | None:intergenic | 25.0% |
| !!! | ATATTTTGAAGACTATTCCA+GGG | - | chr2_2:55057011-55057030 | Msa0258590:intron | 25.0% |
| !! | TTGTTACCTTTGAAAACATT+GGG | + | chr2_2:55057039-55057058 | None:intergenic | 25.0% |
| !! | TTTGTTACCTTTGAAAACAT+TGG | + | chr2_2:55057040-55057059 | None:intergenic | 25.0% |
| ! | CCATTTGATTATATACTACA+CGG | - | chr2_2:55057397-55057416 | Msa0258590:intron | 25.0% |
| ! | CATTTGATTATATACTACAC+GGG | - | chr2_2:55057398-55057417 | Msa0258590:intron | 25.0% |
| ! | TTGAATAACAAAGAAGATCT+AGG | + | chr2_2:55057482-55057501 | None:intergenic | 25.0% |
| ! | ATGTGTTATATAAAGTGTGT+TGG | - | chr2_2:55057579-55057598 | Msa0258590:intron | 25.0% |
| !!! | TTTTATATGGTTTGTCACAT+TGG | + | chr2_2:55057860-55057879 | Msa0258600:CDS | 25.0% |
| ! | GTAAAGGAATATCTATGAAA+AGG | + | chr2_2:55058434-55058453 | Msa0258600:intron | 25.0% |
| !! | AGAATTTTTCTGTGTATCAA+TGG | + | chr2_2:55058506-55058525 | Msa0258600:intron | 25.0% |
| !! | TAAAAGTGAATAGTCTTACA+TGG | + | chr2_2:55058958-55058977 | None:intergenic | 25.0% |
| ! | AGATATATGCAAGAAAAAGA+AGG | + | chr2_2:55058986-55059005 | None:intergenic | 25.0% |
| !!! | CTACACATTTTTTGTTGTTA+CGG | - | chr2_2:55059041-55059060 | Msa0258590:intron | 25.0% |
| ! | CCTTATAGCATAAAATCAAA+TGG | + | chr2_2:55059181-55059200 | None:intergenic | 25.0% |
| !!! | CCATTTGATTTTATGCTATA+AGG | - | chr2_2:55059178-55059197 | Msa0258590:intron | 25.0% |
| ! | ATTGTAGACAATACATTAGT+TGG | - | chr2_2:55059414-55059433 | Msa0258590:intron | 25.0% |
| !!! | AATTTGAAATAGTTTTCCTG+TGG | + | chr2_2:55059506-55059525 | None:intergenic | 25.0% |
| !!! | ATGAAGTAGTTTGATAATGT+TGG | - | chr2_2:55059547-55059566 | Msa0258590:intron | 25.0% |
| ! | TTTACATATATTTCCCAACT+AGG | + | chr2_2:55059585-55059604 | None:intergenic | 25.0% |
| !! | CTATATAGCTGTTATAGTTT+TGG | + | chr2_2:55059652-55059671 | None:intergenic | 25.0% |
| !! | AAAAGGATTTTCAATCATCA+TGG | - | chr2_2:55059963-55059982 | Msa0258590:intron | 25.0% |
| !!! | AATGCTCAGATTGTTTTAAT+AGG | + | chr2_2:55060020-55060039 | None:intergenic | 25.0% |
| ! | ATTAAAACAATCTGAGCATT+CGG | - | chr2_2:55060020-55060039 | Msa0258590:intron | 25.0% |
| ! | AATAAACAAATCAGAGACTA+TGG | + | chr2_2:55060091-55060110 | None:intergenic | 25.0% |
| !! | TTCTGACTTTTATAAGAGTT+GGG | + | chr2_2:55060454-55060473 | None:intergenic | 25.0% |
| !! | ATTCTGACTTTTATAAGAGT+TGG | + | chr2_2:55060455-55060474 | None:intergenic | 25.0% |
| !! | TTTTCAATGGACAATTAACT+TGG | + | chr2_2:55061012-55061031 | None:intergenic | 25.0% |
| ! | TTGTCCATTGAAAATTACAT+TGG | - | chr2_2:55061018-55061037 | Msa0258590:CDS | 25.0% |
| !! | TGTTCCAATGTAATTTTCAA+TGG | + | chr2_2:55061025-55061044 | None:intergenic | 25.0% |
| ! | AAATGATAGAGAATTCACTT+GGG | - | chr2_2:55061153-55061172 | Msa0258590:CDS | 25.0% |
| !!! | GTTTTCTTTTTTTCGATCTT+AGG | + | chr2_2:55061287-55061306 | None:intergenic | 25.0% |
| ! | CAAAAAACTTAGCAAATGTT+AGG | - | chr2_2:55061306-55061325 | Msa0258590:intron | 25.0% |
| ! | TGAATTATCAGATTAGATAG+AGG | + | chr2_2:55061554-55061573 | None:intergenic | 25.0% |
| !!! | TTGTGATTGTGATTGTTTTT+GGG | + | chr2_2:55061729-55061748 | None:intergenic | 25.0% |
| !! | ATTGTGATTGTGATTGTTTT+TGG | + | chr2_2:55061730-55061749 | None:intergenic | 25.0% |
| ! | AGAAGAAAAAATTTCGATCT+GGG | + | chr2_2:55062069-55062088 | None:intergenic | 25.0% |
| ! | AAGAAGAAAAAATTTCGATC+TGG | + | chr2_2:55062070-55062089 | None:intergenic | 25.0% |
| !! | TGTTTTATCAATTACTCGAT+TGG | + | chr2_2:55062232-55062251 | None:intergenic | 25.0% |
| !!! | GATTGATTGATTGATTTTTG+AGG | - | chr2_2:55062271-55062290 | Msa0258590:intron | 25.0% |
| !!! | TTGATTGATTGATTTTTGAG+GGG | - | chr2_2:55062273-55062292 | Msa0258590:intron | 25.0% |
| ! | ATAAGAGAAAGATGATTGAA+CGG | + | chr2_2:55062457-55062476 | None:intergenic | 25.0% |
| ! | TTCAATCATCTTTCTCTTAT+GGG | - | chr2_2:55062457-55062476 | Msa0258590:intron | 25.0% |
| ! | GTTAGTTAGTTAGTTATGTT+GGG | + | chr2_2:55058341-55058360 | Msa0258600:intron | 25.0% |
| ! | AGTTAGTTAGTTAGTTATGT+TGG | + | chr2_2:55058342-55058361 | Msa0258600:intron | 25.0% |
| !!! | AGTTATTTGAGTTGTTATAG+AGG | + | chr2_2:55062629-55062648 | None:intergenic | 25.0% |
| ! | ATCTGTTGAAAATCTTATCA+AGG | + | chr2_2:55062708-55062727 | None:intergenic | 25.0% |
| ! | CAAGATAACAAAAAAAGAGT+AGG | + | chr2_2:55062967-55062986 | None:intergenic | 25.0% |
| ! | AAAATGCTATGTTTCTTGTT+TGG | - | chr2_2:55063195-55063214 | Msa0258590:intron | 25.0% |
| ! | TAGTTATCTTGTAGAACATA+TGG | - | chr2_2:55063330-55063349 | Msa0258590:intron | 25.0% |
| ! | ATAATAATTCATGCTGAGAA+AGG | + | chr2_2:55063457-55063476 | None:intergenic | 25.0% |
| ! | TTATGTAATTGGAATCTCTA+TGG | - | chr2_2:55063676-55063695 | Msa0258590:CDS | 25.0% |
| ! | TATGTAATTGGAATCTCTAT+GGG | - | chr2_2:55063677-55063696 | Msa0258590:intron | 25.0% |
| !!! | ATATCATTTTTGGTGAAGAA+TGG | + | chr2_2:55063988-55064007 | None:intergenic | 25.0% |
| !! | AAAGTTCGAAATGTTTTCAA+AGG | - | chr2_2:55064029-55064048 | Msa0258590:intron | 25.0% |
| !! | GAATTTTCTTTCTTGCATAT+TGG | + | chr2_2:55064212-55064231 | None:intergenic | 25.0% |
| !!! | TTAATTTTTAAGCACTGGTT+GGG | + | chr2_2:55064245-55064264 | None:intergenic | 25.0% |
| !!! | ATTAATTTTTAAGCACTGGT+TGG | + | chr2_2:55064246-55064265 | None:intergenic | 25.0% |
| ! | TTTAATCAGATTTCATATGG+TGG | + | chr2_2:55064283-55064302 | None:intergenic | 25.0% |
| ! | GAAGAAGTTCATTTCATATT+TGG | - | chr2_2:55064503-55064522 | Msa0258590:intron | 25.0% |
| ! | GGTTCAATGAAAAAAATCTT+TGG | + | chr2_2:55064564-55064583 | None:intergenic | 25.0% |
| ! | ACTTCATAATATTGTATCCA+AGG | + | chr2_2:55064589-55064608 | None:intergenic | 25.0% |
| ! | CCTTATAGCATAAAATCAAA+TGG | + | chr2_2:55059181-55059200 | None:intergenic | 25.0% |
| !!! | CCATTTGATTTTATGCTATA+AGG | - | chr2_2:55059178-55059197 | Msa0258590:intron | 25.0% |
| TCTGTTGAATCATCTTGATT+TGG | + | chr2_2:55055501-55055520 | None:intergenic | 30.0% | |
| !! | TTGTATGTTGCTTTGTCTTT+AGG | + | chr2_2:55055597-55055616 | None:intergenic | 30.0% |
| !! | CTCTAAAGAGATGAATTTTC+TGG | - | chr2_2:55055644-55055663 | Msa0258590:intron | 30.0% |
| TCTAAATTCATGCATACCAA+TGG | + | chr2_2:55055811-55055830 | None:intergenic | 30.0% | |
| AGAAATGAAACAATTGGAAC+AGG | - | chr2_2:55056004-55056023 | Msa0258590:CDS | 30.0% | |
| ! | GTACACAAACAAGAGTATAT+TGG | - | chr2_2:55056071-55056090 | Msa0258590:intron | 30.0% |
| ! | GGAGCCAATTTTTATGTAAT+TGG | - | chr2_2:55056340-55056359 | Msa0258590:CDS | 30.0% |
| TTATGTAATTGGAGTCTCAA+TGG | - | chr2_2:55056351-55056370 | Msa0258590:CDS | 30.0% | |
| TATGTAATTGGAGTCTCAAT+GGG | - | chr2_2:55056352-55056371 | Msa0258590:CDS | 30.0% | |
| !! | CAAATATTTTAGACAACTCC+AGG | + | chr2_2:55056389-55056408 | None:intergenic | 30.0% |
| ! | AATGTCTTTATTTACCTGTG+TGG | + | chr2_2:55056412-55056431 | None:intergenic | 30.0% |
| ! | TTCAGAGTAAATCGTCATTT+TGG | - | chr2_2:55056496-55056515 | Msa0258590:intron | 30.0% |
| TTCCTAAAAGAAAACACACT+CGG | + | chr2_2:55056583-55056602 | None:intergenic | 30.0% | |
| TTCATGGTTGAAACTTATCA+AGG | - | chr2_2:55056603-55056622 | Msa0258590:intron | 30.0% | |
| !! | TTACTCTTTTTGGTAAGCTT+TGG | + | chr2_2:55056761-55056780 | None:intergenic | 30.0% |
| ATAGGAGGAGACTTATTAAA+TGG | - | chr2_2:55056870-55056889 | Msa0258590:CDS | 30.0% | |
| TAGGAGGAGACTTATTAAAT+GGG | - | chr2_2:55056871-55056890 | Msa0258590:CDS | 30.0% | |
| !! | GATATTTTGAAGACTATTCC+AGG | - | chr2_2:55057010-55057029 | Msa0258590:intron | 30.0% |
| ! | CATGTTATGTTTCTACATAC+AGG | - | chr2_2:55057148-55057167 | Msa0258590:intron | 30.0% |
| !! | AAGTTGTTTTCGATACACTT+CGG | - | chr2_2:55057186-55057205 | Msa0258590:intron | 30.0% |
| ! | GAATTGAACTTTGTTTGTGA+GGG | + | chr2_2:55057274-55057293 | None:intergenic | 30.0% |
| ! | TGAATTGAACTTTGTTTGTG+AGG | + | chr2_2:55057275-55057294 | None:intergenic | 30.0% |
| AGTTCAATTCATATTTGGCA+AGG | - | chr2_2:55057284-55057303 | Msa0258590:intron | 30.0% | |
| ! | AACTCCAAAGATTTGTTTCA+GGG | - | chr2_2:55057333-55057352 | Msa0258590:intron | 30.0% |
| ACTTCATGATATTGTATCCA+TGG | + | chr2_2:55057365-55057384 | None:intergenic | 30.0% | |
| CCGTGTAGTATATAATCAAA+TGG | + | chr2_2:55057400-55057419 | None:intergenic | 30.0% | |
| !!! | ATTTTGAAGGCACTTTTACT+TGG | - | chr2_2:55057434-55057453 | Msa0258590:intron | 30.0% |
| ATCACAGTAGAAACTTTCTT+TGG | + | chr2_2:55057725-55057744 | Msa0258600:intron | 30.0% | |
| AAGAAAGTTTCTACTGTGAT+TGG | - | chr2_2:55057725-55057744 | Msa0258590:intron | 30.0% | |
| GCTTGTTTAAACTTAAGACT+TGG | + | chr2_2:55057790-55057809 | Msa0258600:CDS | 30.0% | |
| AGAAAAAAATTGCACTGTGA+TGG | - | chr2_2:55057905-55057924 | Msa0258590:intron | 30.0% | |
| GTTTATGGATATCCTTTGAA+AGG | + | chr2_2:55057933-55057952 | Msa0258600:CDS | 30.0% | |
| TTAAGGTGCATTAAATGTGA+AGG | - | chr2_2:55057966-55057985 | Msa0258590:intron | 30.0% | |
| TTCATTTCCTCTGTAAATAG+AGG | - | chr2_2:55058057-55058076 | Msa0258590:intron | 30.0% | |
| !! | TTGGTTCACTATTTTTCTCT+CGG | + | chr2_2:55058179-55058198 | Msa0258600:intron | 30.0% |
| ATAGTGAACCAATATGTAAG+AGG | - | chr2_2:55058187-55058206 | Msa0258590:intron | 30.0% | |
| ! | CTTGATAACAAAAAAAGGGT+AGG | + | chr2_2:55058723-55058742 | Msa0258600:three_prime_UTR | 30.0% |
| !!! | CTACCCTTTTTTTGTTATCA+AGG | - | chr2_2:55058721-55058740 | Msa0258590:intron | 30.0% |
| ! | TCTTTTGAATCATCATGCTT+TGG | + | chr2_2:55058767-55058786 | None:intergenic | 30.0% |
| AAAGCATGATGATTCAAAAG+AGG | - | chr2_2:55058766-55058785 | Msa0258590:intron | 30.0% | |
| CGTAACAACAAAAAATGTGT+AGG | + | chr2_2:55059043-55059062 | None:intergenic | 30.0% | |
| ! | TCTTTTGAATCATCATGCTT+TGG | + | chr2_2:55058767-55058786 | None:intergenic | 30.0% |
| AAAGCATGATGATTCAAAAG+AGG | - | chr2_2:55058766-55058785 | Msa0258590:intron | 30.0% | |
| ! | CATGTATGAGGAAATTTTGA+GGG | - | chr2_2:55059202-55059221 | Msa0258590:intron | 30.0% |
| TTGAATAGCAAAGATGATCT+AGG | + | chr2_2:55059263-55059282 | None:intergenic | 30.0% | |
| TAGACAATACATTAGTTGGT+TGG | - | chr2_2:55059418-55059437 | Msa0258590:intron | 30.0% | |
| TACATTAGTTGGTTGGAAAT+AGG | - | chr2_2:55059425-55059444 | Msa0258590:intron | 30.0% | |
| GTTTCTAATTCATCCTAGTT+GGG | - | chr2_2:55059569-55059588 | Msa0258590:intron | 30.0% | |
| TACAAAATGTTGTCGAATAG+TGG | - | chr2_2:55059740-55059759 | Msa0258590:intron | 30.0% | |
| !! | CTTATTTTCATGGGACAATT+AGG | + | chr2_2:55059859-55059878 | None:intergenic | 30.0% |
| CTGCAATAATCTGACATATA+TGG | - | chr2_2:55060050-55060069 | Msa0258590:intron | 30.0% | |
| !! | TAGCTGAAACGTTCTTATTT+TGG | + | chr2_2:55060249-55060268 | None:intergenic | 30.0% |
| ! | GCTATTGATCAGTTGAATTT+TGG | - | chr2_2:55060265-55060284 | Msa0258590:intron | 30.0% |
| ! | TTGAGTTGCTCAAGAAATTT+AGG | + | chr2_2:55060294-55060313 | None:intergenic | 30.0% |
| AAATTTGATGAACCTGTTTG+TGG | + | chr2_2:55060549-55060568 | None:intergenic | 30.0% | |
| GAAAATTTGATTGTATCGCA+AGG | + | chr2_2:55060679-55060698 | None:intergenic | 30.0% | |
| AAGCAAGAATTATATGGAAC+TGG | - | chr2_2:55060762-55060781 | Msa0258590:intron | 30.0% | |
| CAAATGATAGAGAATTCACT+TGG | - | chr2_2:55061152-55061171 | Msa0258590:CDS | 30.0% | |
| AAATGTTAATGAAGTCTGAG+AGG | - | chr2_2:55061201-55061220 | Msa0258590:intron | 30.0% | |
| GTAAACTACAGTTAGTAGAA+TGG | + | chr2_2:55061462-55061481 | None:intergenic | 30.0% | |
| ! | TACATAAGTAGTGGTTAGTT+GGG | + | chr2_2:55061501-55061520 | None:intergenic | 30.0% |
| ATACATAAGTAGTGGTTAGT+TGG | + | chr2_2:55061502-55061521 | None:intergenic | 30.0% | |
| ! | AACTAAATTGGACTCTGAAA+TGG | + | chr2_2:55061806-55061825 | None:intergenic | 30.0% |
| GAGAATGCAGAAAACTAAAT+TGG | + | chr2_2:55061818-55061837 | None:intergenic | 30.0% | |
| !! | TTTTATTTAATTGTGCGTGC+AGG | + | chr2_2:55061868-55061887 | None:intergenic | 30.0% |
| TCGATGAAAATGATGAATGA+AGG | + | chr2_2:55061967-55061986 | None:intergenic | 30.0% | |
| AAAAAATTTCGATCTGGGTT+TGG | + | chr2_2:55062064-55062083 | None:intergenic | 30.0% | |
| CAATCAAACCAACAACAAAT+TGG | - | chr2_2:55062205-55062224 | Msa0258590:intron | 30.0% | |
| GTTCAATCATCTTTCTCTTA+TGG | - | chr2_2:55062456-55062475 | Msa0258590:intron | 30.0% | |
| CAAGGAATATCTATAAAGGT+AGG | + | chr2_2:55062690-55062709 | None:intergenic | 30.0% | |
| ! | GAAATTTTTCTGTGCATCAA+TGG | + | chr2_2:55062770-55062789 | None:intergenic | 30.0% |
| ! | TCTTTTGAATCAACATGCTT+TGG | + | chr2_2:55063011-55063030 | None:intergenic | 30.0% |
| !! | AAAGCATGTTGATTCAAAAG+AGG | - | chr2_2:55063010-55063029 | Msa0258590:CDS | 30.0% |
| ! | TGTATTTTGCTTTGTCCTTA+GGG | + | chr2_2:55063082-55063101 | None:intergenic | 30.0% |
| ! | TTGTATTTTGCTTTGTCCTT+AGG | + | chr2_2:55063083-55063102 | None:intergenic | 30.0% |
| AATAAGCACTTATGCTACAA+CGG | + | chr2_2:55063239-55063258 | None:intergenic | 30.0% | |
| !! | TGAATGATGTTGATTCACAT+AGG | - | chr2_2:55063506-55063525 | Msa0258590:intron | 30.0% |
| !! | TCACTTTTCATTGAACAGTT+GGG | + | chr2_2:55063605-55063624 | None:intergenic | 30.0% |
| !! | TTCACTTTTCATTGAACAGT+TGG | + | chr2_2:55063606-55063625 | None:intergenic | 30.0% |
| !! | GGAGAACAGTTTTATGTAAT+TGG | - | chr2_2:55063665-55063684 | Msa0258590:CDS | 30.0% |
| AGTATTGTAATTTACCTGTG+AGG | + | chr2_2:55063737-55063756 | None:intergenic | 30.0% | |
| ! | TTAGTATTTATTTGGAACCG+TGG | - | chr2_2:55064135-55064154 | Msa0258590:intron | 30.0% |
| ! | TGACTTGTAGAACAAGTTAA+GGG | - | chr2_2:55064384-55064403 | Msa0258590:CDS | 30.0% |
| TTTACACTCTTTGTGATGAT+TGG | - | chr2_2:55064419-55064438 | Msa0258590:CDS | 30.0% | |
| AGTTCATTTCATATTTGGCA+AGG | - | chr2_2:55064508-55064527 | Msa0258590:intron | 30.0% | |
| !! | AAAAATCTTTGGAGTTCAGA+GGG | + | chr2_2:55064553-55064572 | None:intergenic | 30.0% |
| !! | AAAAAATCTTTGGAGTTCAG+AGG | + | chr2_2:55064554-55064573 | None:intergenic | 30.0% |
| !!! | TTTTTTCATTGAACCTACCT+TGG | - | chr2_2:55064569-55064588 | Msa0258590:intron | 30.0% |
| CATAATATTGTATCCAAGGT+AGG | + | chr2_2:55064585-55064604 | None:intergenic | 30.0% | |
| CAATATTATGAAGTTCCAGA+TGG | - | chr2_2:55064595-55064614 | Msa0258590:intron | 30.0% | |
| ! | CATGTGTGATTCAATTTTGA+GGG | - | chr2_2:55064645-55064664 | Msa0258590:CDS | 30.0% |
| CAGACACGTAAATTATGTAG+AGG | - | chr2_2:55055310-55055329 | Msa0258590:CDS | 35.0% | |
| ATTATGTAGAGGTTTCTGTC+AGG | - | chr2_2:55055321-55055340 | Msa0258590:CDS | 35.0% | |
| CCATCTCTAAGTCTAATTCT+TGG | + | chr2_2:55055543-55055562 | None:intergenic | 35.0% | |
| CCAAGAATTAGACTTAGAGA+TGG | - | chr2_2:55055540-55055559 | Msa0258590:intron | 35.0% | |
| TACAAGATCATCATTGTGCA+TGG | - | chr2_2:55055612-55055631 | Msa0258590:intron | 35.0% | |
| ! | ATCATCATTGTGCATGGTTT+TGG | - | chr2_2:55055618-55055637 | Msa0258590:intron | 35.0% |
| TGTTGACAAATCACAACCAT+TGG | - | chr2_2:55055792-55055811 | Msa0258590:intron | 35.0% | |
| GGAACAGGTTCAATATGATT+AGG | - | chr2_2:55056019-55056038 | Msa0258590:CDS | 35.0% | |
| TCCTTGCTAGCAGATATAAT+TGG | - | chr2_2:55056097-55056116 | Msa0258590:intron | 35.0% | |
| ACCAATTATATCTGCTAGCA+AGG | + | chr2_2:55056101-55056120 | None:intergenic | 35.0% | |
| ! | GTGATATGACTGATTCACAT+AGG | - | chr2_2:55056183-55056202 | Msa0258590:intron | 35.0% |
| CTTCTACAATATGATAGAGC+TGG | - | chr2_2:55056232-55056251 | Msa0258590:CDS | 35.0% | |
| CAATATGATAGAGCTGGATA+TGG | - | chr2_2:55056238-55056257 | Msa0258590:CDS | 35.0% | |
| !! | TCACTTTTCAGTGAACGTTT+GGG | + | chr2_2:55056280-55056299 | None:intergenic | 35.0% |
| !! | TTCACTTTTCAGTGAACGTT+TGG | + | chr2_2:55056281-55056300 | None:intergenic | 35.0% |
| ! | GTCTAAAATATTTGCCACAC+AGG | - | chr2_2:55056395-55056414 | Msa0258590:CDS | 35.0% |
| ACTTACAACAGATGAGTTTG+AGG | - | chr2_2:55056646-55056665 | Msa0258590:intron | 35.0% | |
| CACCAGTTATCAACTATAGA+TGG | - | chr2_2:55056813-55056832 | Msa0258590:intron | 35.0% | |
| GTTTGATAAGAGAGGACTAT+AGG | - | chr2_2:55056852-55056871 | Msa0258590:CDS | 35.0% | |
| GACTTATTAAATGGGCACTA+TGG | - | chr2_2:55056879-55056898 | Msa0258590:CDS | 35.0% | |
| ACTGTCCTAAACTATTGCAT+TGG | - | chr2_2:55056912-55056931 | Msa0258590:CDS | 35.0% | |
| ! | TCCTAAACTATTGCATTGGT+GGG | - | chr2_2:55056916-55056935 | Msa0258590:CDS | 35.0% |
| ! | TTTTCTATGACAGCAGTTGA+AGG | + | chr2_2:55056959-55056978 | None:intergenic | 35.0% |
| TTCTTCATCTGTCTCATGTT+AGG | - | chr2_2:55057061-55057080 | Msa0258590:CDS | 35.0% | |
| ! | TATGTTTCTACATACAGGAC+AGG | - | chr2_2:55057153-55057172 | Msa0258590:intron | 35.0% |
| !! | AATGGATTGCTTAGCTTCAT+TGG | + | chr2_2:55057251-55057270 | None:intergenic | 35.0% |
| !! | ACAAATCTTTGGAGTTCAGA+GGG | + | chr2_2:55057329-55057348 | None:intergenic | 35.0% |
| !! | AACAAATCTTTGGAGTTCAG+AGG | + | chr2_2:55057330-55057349 | None:intergenic | 35.0% |
| ! | GAACTCCAAAGATTTGTTTC+AGG | - | chr2_2:55057332-55057351 | Msa0258590:intron | 35.0% |
| CAATATCATGAAGTTCCAGA+TGG | - | chr2_2:55057371-55057390 | Msa0258590:intron | 35.0% | |
| !! | CTTATGTGAGGCTATTTTGA+AGG | - | chr2_2:55057421-55057440 | Msa0258590:intron | 35.0% |
| AAAGAGAACTGCAAGCTATA+AGG | + | chr2_2:55058016-55058035 | Msa0258600:intron | 35.0% | |
| ! | CGTTTTCTTCTTTGTCCTTA+AGG | + | chr2_2:55058850-55058869 | None:intergenic | 35.0% |
| !! | TGTTACGGTTTTTCAGACAA+AGG | - | chr2_2:55059056-55059075 | Msa0258590:intron | 35.0% |
| ! | TTTTCAGACAAAGGTTCATG+TGG | - | chr2_2:55059065-55059084 | Msa0258590:intron | 35.0% |
| TTTCAGACAAAGGTTCATGT+GGG | - | chr2_2:55059066-55059085 | Msa0258590:intron | 35.0% | |
| ACTTCATGATCTTGTATCCA+AGG | + | chr2_2:55059146-55059165 | None:intergenic | 35.0% | |
| ! | GCATGTATGAGGAAATTTTG+AGG | - | chr2_2:55059201-55059220 | Msa0258590:intron | 35.0% |
| GGTCTATATGCATGATTTCA+TGG | + | chr2_2:55059242-55059261 | None:intergenic | 35.0% | |
| CATCACTTAGTAGATCAAAG+TGG | + | chr2_2:55059353-55059372 | None:intergenic | 35.0% | |
| ATCACTTAACAAACGACTGA+AGG | + | chr2_2:55059473-55059492 | None:intergenic | 35.0% | |
| AGTGATTCAAATAACACCAC+AGG | - | chr2_2:55059487-55059506 | Msa0258590:intron | 35.0% | |
| GGTTTCTAATTCATCCTAGT+TGG | - | chr2_2:55059568-55059587 | Msa0258590:intron | 35.0% | |
| GCTATACTGCTATAACATAG+CGG | - | chr2_2:55059676-55059695 | Msa0258590:intron | 35.0% | |
| TTGTACTAAATAGCGTATCG+TGG | + | chr2_2:55059725-55059744 | None:intergenic | 35.0% | |
| TTCAATCATCATGGCTCAAA+AGG | - | chr2_2:55059972-55059991 | Msa0258590:intron | 35.0% | |
| ACTGTAAAATGACCGAACTT+TGG | - | chr2_2:55060112-55060131 | Msa0258590:intron | 35.0% | |
| CGCAACAAAAAACCAAAGTT+CGG | + | chr2_2:55060127-55060146 | None:intergenic | 35.0% | |
| !!! | CGAACTTTGGTTTTTTGTTG+CGG | - | chr2_2:55060125-55060144 | Msa0258590:intron | 35.0% |
| AGTTGCTCAAGAAATTTAGG+TGG | + | chr2_2:55060291-55060310 | None:intergenic | 35.0% | |
| ATGAAGTTTATGGCTGTTCA+GGG | + | chr2_2:55060354-55060373 | None:intergenic | 35.0% | |
| AATGAAGTTTATGGCTGTTC+AGG | + | chr2_2:55060355-55060374 | None:intergenic | 35.0% | |
| AAATTCTTAAAGCTGGACTG+CGG | + | chr2_2:55060405-55060424 | None:intergenic | 35.0% | |
| !! | ACAGGCGAAAATTCTGAAAT+AGG | + | chr2_2:55060483-55060502 | None:intergenic | 35.0% |
| TTGAATAAAAAGCCTGCAAC+AGG | - | chr2_2:55060568-55060587 | Msa0258590:intron | 35.0% | |
| TTGAATAAAAAGCCTGCAAC+AGG | - | chr2_2:55060568-55060587 | Msa0258590:intron | 35.0% | |
| CGAGAGAAAATTTCTACTGA+CGG | + | chr2_2:55060734-55060753 | None:intergenic | 35.0% | |
| AAACCTATGTTGACAAGTGT+TGG | - | chr2_2:55060976-55060995 | Msa0258590:intron | 35.0% | |
| ! | TGGACAATTAACTTGGTACT+TGG | + | chr2_2:55061005-55061024 | None:intergenic | 35.0% |
| TAGAGAATTCACTTGGGTAT+CGG | - | chr2_2:55061159-55061178 | Msa0258590:CDS | 35.0% | |
| ! | ACATAAGTAGTGGTTAGTTG+GGG | + | chr2_2:55061500-55061519 | None:intergenic | 35.0% |
| !! | TTAGTTTTCTGCATTCTCTG+TGG | - | chr2_2:55061820-55061839 | Msa0258590:intron | 35.0% |
| GGTAAGCATGAATTAATTCG+TGG | + | chr2_2:55061946-55061965 | None:intergenic | 35.0% | |
| TCGAAAGTTCAACGAAAGAA+CGG | - | chr2_2:55061983-55062002 | Msa0258590:intron | 35.0% | |
| !! | TGGATAATGGATGAATGTGT+CGG | + | chr2_2:55062159-55062178 | None:intergenic | 35.0% |
| ! | TTTAGGGTTTGCTTATGTGA+TGG | - | chr2_2:55062337-55062356 | Msa0258590:intron | 35.0% |
| ATGGAATATGGAGCAGAATT+GGG | + | chr2_2:55062497-55062516 | None:intergenic | 35.0% | |
| TATGGAATATGGAGCAGAAT+TGG | + | chr2_2:55062498-55062517 | None:intergenic | 35.0% | |
| AGACACAGGAAATCTTCAAA+AGG | - | chr2_2:55062871-55062890 | Msa0258590:intron | 35.0% | |
| AACATAAGCCAATTGCACAA+TGG | + | chr2_2:55063048-55063067 | None:intergenic | 35.0% | |
| TACAAGATCATCATTGTGCA+TGG | - | chr2_2:55055612-55055631 | Msa0258590:intron | 35.0% | |
| ! | ATCATCATTGTGCATGGTTT+TGG | - | chr2_2:55055618-55055637 | Msa0258590:intron | 35.0% |
| GAGATTATTACTTGAGATGC+TGG | + | chr2_2:55063152-55063171 | None:intergenic | 35.0% | |
| ! | CACTTTTCATTGAACAGTTG+GGG | + | chr2_2:55063604-55063623 | None:intergenic | 35.0% |
| AGTACTTGACATTCAAGAAC+TGG | - | chr2_2:55063625-55063644 | Msa0258590:CDS | 35.0% | |
| GATCAAAGTCAAATTTGTGC+AGG | - | chr2_2:55063839-55063858 | Msa0258590:intron | 35.0% | |
| ! | CAAATTTGTGCAGGCTTTAT+AGG | - | chr2_2:55063848-55063867 | Msa0258590:intron | 35.0% |
| ACATACCAATGCAATAGTCT+AGG | + | chr2_2:55063916-55063935 | None:intergenic | 35.0% | |
| ATTGGTATGTGACTCAAATG+TGG | - | chr2_2:55063926-55063945 | Msa0258590:intron | 35.0% | |
| CAAAGGCAATAGTAACTGAA+GGG | + | chr2_2:55063954-55063973 | None:intergenic | 35.0% | |
| TCAAAGGCAATAGTAACTGA+AGG | + | chr2_2:55063955-55063974 | None:intergenic | 35.0% | |
| !!! | GAATGGTGGATTCTTTTCAA+AGG | + | chr2_2:55063971-55063990 | None:intergenic | 35.0% |
| !!! | TCATTTTTGGTGAAGAATGG+TGG | + | chr2_2:55063985-55064004 | None:intergenic | 35.0% |
| ! | TACAAATAGTAGCTTGTGGA+TGG | + | chr2_2:55064183-55064202 | None:intergenic | 35.0% |
| AAGCTACAAATAGTAGCTTG+TGG | + | chr2_2:55064187-55064206 | None:intergenic | 35.0% | |
| CTACAAGTCAGAACATATCA+TGG | + | chr2_2:55064374-55064393 | None:intergenic | 35.0% | |
| ! | CTGACTTGTAGAACAAGTTA+AGG | - | chr2_2:55064383-55064402 | Msa0258590:CDS | 35.0% |
| ! | AAAGAGTGTAAAAAACAGCC+TGG | + | chr2_2:55064411-55064430 | None:intergenic | 35.0% |
| AATTCGATCCAATGAAGACA+AGG | - | chr2_2:55064464-55064483 | Msa0258590:intron | 35.0% | |
| ATTCGATCCAATGAAGACAA+GGG | - | chr2_2:55064465-55064484 | Msa0258590:intron | 35.0% | |
| GAAATGAACTTCTTCTGTGA+GGG | + | chr2_2:55064498-55064517 | None:intergenic | 35.0% | |
| TGAAATGAACTTCTTCTGTG+AGG | + | chr2_2:55064499-55064518 | None:intergenic | 35.0% | |
| TATTATGAAGTTCCAGATGG+TGG | - | chr2_2:55064598-55064617 | Msa0258590:intron | 35.0% | |
| ! | GCATGTGTGATTCAATTTTG+AGG | - | chr2_2:55064644-55064663 | Msa0258590:CDS | 35.0% |
| !!! | ATTTTGAGGGCACTTTTACT+TGG | - | chr2_2:55064658-55064677 | Msa0258590:CDS | 35.0% |
| CATCTTGCTTATGTTGAGAG+AGG | - | chr2_2:55055567-55055586 | Msa0258590:intron | 40.0% | |
| ! | TTCAGTGAACGTTTGGGATT+TGG | + | chr2_2:55056274-55056293 | None:intergenic | 40.0% |
| AGCAAGTTCTTCAATGTCGA+GGG | + | chr2_2:55056305-55056324 | None:intergenic | 40.0% | |
| CTTGCTGATCAGTTGCAAAT+TGG | - | chr2_2:55056319-55056338 | Msa0258590:CDS | 40.0% | |
| ! | CACCGAGTGTGTTTTCTTTT+AGG | - | chr2_2:55056578-55056597 | Msa0258590:intron | 40.0% |
| TCCTAAATCATGTGAGACGA+TGG | + | chr2_2:55056709-55056728 | None:intergenic | 40.0% | |
| ! | CCTGCACAAGTTACTCTTTT+TGG | + | chr2_2:55056771-55056790 | None:intergenic | 40.0% |
| ! | CCAAAAAGAGTAACTTGTGC+AGG | - | chr2_2:55056768-55056787 | Msa0258590:intron | 40.0% |
| !! | GGCCATCTATAGTTGATAAC+TGG | + | chr2_2:55056818-55056837 | None:intergenic | 40.0% |
| TGATAAGAGAGGACTATAGG+AGG | - | chr2_2:55056855-55056874 | Msa0258590:CDS | 40.0% | |
| GTCCTAAACTATTGCATTGG+TGG | - | chr2_2:55056915-55056934 | Msa0258590:CDS | 40.0% | |
| ACCCACCAATGCAATAGTTT+AGG | + | chr2_2:55056920-55056939 | None:intergenic | 40.0% | |
| TTTGAAAACATTGGGAACCC+TGG | + | chr2_2:55057031-55057050 | None:intergenic | 40.0% | |
| ! | AGGGTTCCCAATGTTTTCAA+AGG | - | chr2_2:55057030-55057049 | Msa0258590:intron | 40.0% |
| ! | GAACTTTGTTTGTGAGGGAA+TGG | + | chr2_2:55057269-55057288 | None:intergenic | 40.0% |
| GCTTCCCTGAAACAAATCTT+TGG | + | chr2_2:55057340-55057359 | None:intergenic | 40.0% | |
| TATCATGAAGTTCCAGATGG+TGG | - | chr2_2:55057374-55057393 | Msa0258590:intron | 40.0% | |
| ATAATCAAATGGCCACCATC+TGG | + | chr2_2:55057389-55057408 | None:intergenic | 40.0% | |
| ! | ACTGTGATGGAACCTTTCAA+AGG | - | chr2_2:55057918-55057937 | Msa0258590:intron | 40.0% |
| GCTGAAACCTCTATTTACAG+AGG | + | chr2_2:55058067-55058086 | Msa0258600:intron | 40.0% | |
| ACCAATATGTAAGAGGCCTA+TGG | - | chr2_2:55058194-55058213 | Msa0258590:intron | 40.0% | |
| CCAATATGTAAGAGGCCTAT+GGG | - | chr2_2:55058195-55058214 | Msa0258590:intron | 40.0% | |
| CAATATGTAAGAGGCCTATG+GGG | - | chr2_2:55058196-55058215 | Msa0258590:intron | 40.0% | |
| TTTCCTTGCTCACATTGAGA+AGG | - | chr2_2:55058229-55058248 | Msa0258590:intron | 40.0% | |
| TAACCTTCTCAATGTGAGCA+AGG | + | chr2_2:55058235-55058254 | Msa0258600:intron | 40.0% | |
| TTGCTCACATTGAGAAGGTT+AGG | - | chr2_2:55058234-55058253 | Msa0258590:intron | 40.0% | |
| AATGGAATGAGAGAAGAGTG+TGG | + | chr2_2:55058488-55058507 | Msa0258600:intron | 40.0% | |
| CTATCTCTGAGTCTGATTCT+TGG | + | chr2_2:55058797-55058816 | None:intergenic | 40.0% | |
| CAAGAATCAGACTCAGAGAT+AGG | - | chr2_2:55058795-55058814 | Msa0258590:intron | 40.0% | |
| CACCTTGCTTACATTGAGAA+AGG | - | chr2_2:55058821-55058840 | Msa0258590:intron | 40.0% | |
| AGCCTTTCTCAATGTAAGCA+AGG | + | chr2_2:55058826-55058845 | None:intergenic | 40.0% | |
| CATTGAGAAAGGCTTCCTTA+AGG | - | chr2_2:55058832-55058851 | Msa0258590:intron | 40.0% | |
| TTCTGAGTCTGATGAACTTG+TGG | + | chr2_2:55058917-55058936 | None:intergenic | 40.0% | |
| CAAGATCATGAAGTTCCAGA+TGG | - | chr2_2:55059152-55059171 | Msa0258590:intron | 40.0% | |
| AAAATCAAATGGCCACCATC+TGG | + | chr2_2:55059170-55059189 | None:intergenic | 40.0% | |
| ! | ATGCTATAAGGGCATGTATG+AGG | - | chr2_2:55059190-55059209 | Msa0258590:intron | 40.0% |
| !!! | GGAAATTTTGAGGGCACTTT+TGG | - | chr2_2:55059211-55059230 | Msa0258590:intron | 40.0% |
| CCTACAAAAACTCAGCAACA+AGG | + | chr2_2:55059385-55059404 | None:intergenic | 40.0% | |
| ! | CCTTGTTGCTGAGTTTTTGT+AGG | - | chr2_2:55059382-55059401 | Msa0258590:intron | 40.0% |
| !! | TTGTCGAATAGTGGATAGAG+TGG | - | chr2_2:55059749-55059768 | Msa0258590:intron | 40.0% |
| ! | CAAGGGTCTCTAACCATTTT+TGG | - | chr2_2:55059920-55059939 | Msa0258590:intron | 40.0% |
| TCATGGCTCAAAAGGTTATC+TGG | - | chr2_2:55059980-55059999 | Msa0258590:intron | 40.0% | |
| !!! | CTTTGGTTTTTTGTTGCGGA+TGG | - | chr2_2:55060129-55060148 | Msa0258590:intron | 40.0% |
| TATCTCGGATAGTATTGCAG+CGG | - | chr2_2:55060156-55060175 | Msa0258590:intron | 40.0% | |
| TCAGATCAGAGTCAAACAAC+AGG | + | chr2_2:55060501-55060520 | None:intergenic | 40.0% | |
| GTTGTTTGACTCTGATCTGA+AGG | - | chr2_2:55060501-55060520 | Msa0258590:intron | 40.0% | |
| TTGTGGATGAGATAATGCCT+TGG | + | chr2_2:55060532-55060551 | None:intergenic | 40.0% | |
| GCATTATCTCATCCACAAAC+AGG | - | chr2_2:55060534-55060553 | Msa0258590:intron | 40.0% | |
| TTCAAAACAGAACCTGTTGC+AGG | + | chr2_2:55060583-55060602 | None:intergenic | 40.0% | |
| TTCAAAACAGAACCTGTTGC+AGG | + | chr2_2:55060583-55060602 | None:intergenic | 40.0% | |
| TCTACTGACGGTTCCATATA+TGG | + | chr2_2:55060722-55060741 | None:intergenic | 40.0% | |
| GATACATGATGCATGATGCA+CGG | - | chr2_2:55060820-55060839 | Msa0258590:CDS | 40.0% | |
| GCACGGTACAAAAAATCAGT+TGG | - | chr2_2:55060837-55060856 | Msa0258590:CDS | 40.0% | |
| GTTGCATGAGCATAGTGAAT+TGG | + | chr2_2:55060882-55060901 | None:intergenic | 40.0% | |
| CTTCCAACACTTGTCAACAT+AGG | + | chr2_2:55060982-55061001 | None:intergenic | 40.0% | |
| CATCTACTGTTTGAGCTTAG+TGG | + | chr2_2:55061060-55061079 | None:intergenic | 40.0% | |
| ACTTAGCAAATGTTAGGGAG+AGG | - | chr2_2:55061312-55061331 | Msa0258590:CDS | 40.0% | |
| CTTAGCAAATGTTAGGGAGA+GGG | - | chr2_2:55061313-55061332 | Msa0258590:CDS | 40.0% | |
| !! | AGGTTTGGTGGTAAACGTTT+CGG | + | chr2_2:55062036-55062055 | None:intergenic | 40.0% |
| CAGAGAGAGTTGTTGGATAA+TGG | + | chr2_2:55062172-55062191 | None:intergenic | 40.0% | |
| AACTTTGCAGAGAGAGTTGT+TGG | + | chr2_2:55062179-55062198 | None:intergenic | 40.0% | |
| !! | CGATTGGTCCAATTTGTTGT+TGG | + | chr2_2:55062216-55062235 | None:intergenic | 40.0% |
| ! | GATGATTGAACGGTGTTAGT+AGG | + | chr2_2:55062447-55062466 | None:intergenic | 40.0% |
| ATCATCTTTCTCTTATGGGC+TGG | - | chr2_2:55062461-55062480 | Msa0258590:intron | 40.0% | |
| ACCAAGAACCATTGTGCAAT+TGG | - | chr2_2:55063037-55063056 | Msa0258590:CDS | 40.0% | |
| ! | CAATTGGCTTATGTTGAGAG+AGG | - | chr2_2:55063053-55063072 | Msa0258590:CDS | 40.0% |
| TTCATTGAACAGTTGGGGTT+CGG | + | chr2_2:55063599-55063618 | None:intergenic | 40.0% | |
| GTGTAAACTACTTTCCTCAC+AGG | - | chr2_2:55063720-55063739 | Msa0258590:intron | 40.0% | |
| ATTACACTCAATCGTATGCG+TGG | - | chr2_2:55063802-55063821 | Msa0258590:intron | 40.0% | |
| ! | ATTTGTGCAGGCTTTATAGG+AGG | - | chr2_2:55063851-55063870 | Msa0258590:intron | 40.0% |
| ATAGGAGGAAACCTGTTATG+TGG | - | chr2_2:55063866-55063885 | Msa0258590:intron | 40.0% | |
| AACCTGTTATGTGGACAAGT+TGG | - | chr2_2:55063875-55063894 | Msa0258590:intron | 40.0% | |
| AACCAACTTGTCCACATAAC+AGG | + | chr2_2:55063880-55063899 | None:intergenic | 40.0% | |
| ACTGTCCTAGACTATTGCAT+TGG | - | chr2_2:55063908-55063927 | Msa0258590:intron | 40.0% | |
| ACACTCTTTGTGATGATTGG+AGG | - | chr2_2:55064422-55064441 | Msa0258590:CDS | 40.0% | |
| CACTCTTTGTGATGATTGGA+GGG | - | chr2_2:55064423-55064442 | Msa0258590:CDS | 40.0% | |
| AATGGATCCCTTGTCTTCAT+TGG | + | chr2_2:55064475-55064494 | None:intergenic | 40.0% | |
| AAAATCAAATGGCCACCATC+TGG | + | chr2_2:55059170-55059189 | None:intergenic | 40.0% | |
| CAGCAAGTTCTTCAATGTCG+AGG | + | chr2_2:55056306-55056325 | None:intergenic | 45.0% | |
| ! | CAATGGGTTCATATGCTACC+TGG | - | chr2_2:55056368-55056387 | Msa0258590:CDS | 45.0% |
| GCCATCGTCTCACATGATTT+AGG | - | chr2_2:55056705-55056724 | Msa0258590:intron | 45.0% | |
| CCTCTCTTATCAAACTCCCA+GGG | + | chr2_2:55056847-55056866 | None:intergenic | 45.0% | |
| TCCTCTCTTATCAAACTCCC+AGG | + | chr2_2:55056848-55056867 | None:intergenic | 45.0% | |
| ! | ATTGGTGGGTGACTCAAAAG+TGG | - | chr2_2:55056930-55056949 | Msa0258590:CDS | 45.0% |
| TCTACATACAGGACAGGCTA+AGG | - | chr2_2:55057159-55057178 | Msa0258590:intron | 45.0% | |
| CTACATACAGGACAGGCTAA+GGG | - | chr2_2:55057160-55057179 | Msa0258590:intron | 45.0% | |
| TCGATACACTTCGGCATGAT+TGG | - | chr2_2:55057195-55057214 | Msa0258590:intron | 45.0% | |
| ATACACTTCGGCATGATTGG+AGG | - | chr2_2:55057198-55057217 | Msa0258590:intron | 45.0% | |
| TACACTTCGGCATGATTGGA+GGG | - | chr2_2:55057199-55057218 | Msa0258590:intron | 45.0% | |
| ! | CATGATTGGAGGGTAGCTTT+TGG | - | chr2_2:55057209-55057228 | Msa0258590:intron | 45.0% |
| !! | GAGGGTAGCTTTTGGAAAGT+GGG | - | chr2_2:55057217-55057236 | Msa0258590:intron | 45.0% |
| ATACTACACGGGCTTATGTG+AGG | - | chr2_2:55057409-55057428 | Msa0258590:intron | 45.0% | |
| AAGGTGCACAAATTCTCCCA+TGG | - | chr2_2:55057985-55058004 | Msa0258590:intron | 45.0% | |
| AAGCTATAAGGCTGTGCCAT+GGG | + | chr2_2:55058004-55058023 | Msa0258600:intron | 45.0% | |
| GAGGTTTCAGCAAAGCAAGA+TGG | - | chr2_2:55058076-55058095 | Msa0258590:intron | 45.0% | |
| TCTCTCGGAACGACTATTCA+AGG | + | chr2_2:55058164-55058183 | Msa0258600:intron | 45.0% | |
| CCCATAGGCCTCTTACATAT+TGG | + | chr2_2:55058198-55058217 | Msa0258600:intron | 45.0% | |
| TCCACAAGTTCATCAGACAC+AGG | - | chr2_2:55058593-55058612 | Msa0258590:intron | 45.0% | |
| TCCTGTGTCTGATGAACTTG+TGG | + | chr2_2:55058597-55058616 | Msa0258600:intron | 45.0% | |
| GAATCAGACTCAGAGATAGG+AGG | - | chr2_2:55058798-55058817 | Msa0258590:intron | 45.0% | |
| ! | GTTTTACCAAGAAGCTGCCT+TGG | - | chr2_2:55059126-55059145 | Msa0258590:intron | 45.0% |
| TTGTATCCAAGGCAGCTTCT+TGG | + | chr2_2:55059135-55059154 | None:intergenic | 45.0% | |
| GATCATGAAGTTCCAGATGG+TGG | - | chr2_2:55059155-55059174 | Msa0258590:intron | 45.0% | |
| AGCGTATCGTGGAACAATAG+TGG | + | chr2_2:55059714-55059733 | None:intergenic | 45.0% | |
| AGTGTTTGACCTGCAAAGCA+AGG | - | chr2_2:55059902-55059921 | Msa0258590:intron | 45.0% | |
| GTGTTTGACCTGCAAAGCAA+GGG | - | chr2_2:55059903-55059922 | Msa0258590:intron | 45.0% | |
| TGGCTCAAAAGGTTATCTGG+TGG | - | chr2_2:55059983-55060002 | Msa0258590:intron | 45.0% | |
| GTTGCGGATGGATGATATCT+CGG | - | chr2_2:55060141-55060160 | Msa0258590:intron | 45.0% | |
| ATAGTATTGCAGCGGTCAGT+TGG | - | chr2_2:55060164-55060183 | Msa0258590:intron | 45.0% | |
| TGAAGTCACTTCATGCCAAG+AGG | - | chr2_2:55060315-55060334 | Msa0258590:intron | 45.0% | |
| TGGATGAGATAATGCCTTGG+AGG | + | chr2_2:55060529-55060548 | None:intergenic | 45.0% | |
| GGCTTCAGCTCTACCATATA+TGG | + | chr2_2:55060701-55060720 | None:intergenic | 45.0% | |
| GGTAGAGCTGAAGCCATATA+TGG | - | chr2_2:55060706-55060725 | Msa0258590:intron | 45.0% | |
| GCATGAGCATAGTGAATTGG+TGG | + | chr2_2:55060879-55060898 | None:intergenic | 45.0% | |
| ! | CTGTTTGAGCTTAGTGGATC+AGG | + | chr2_2:55061054-55061073 | None:intergenic | 45.0% |
| GTTGGAGCAATCAGATTCTG+AGG | - | chr2_2:55061231-55061250 | Msa0258590:intron | 45.0% | |
| ! | GATTCTGAGGAGACATCCTT+TGG | - | chr2_2:55061244-55061263 | Msa0258590:intron | 45.0% |
| ACATCCTTTGGTTGTCCAGA+AGG | - | chr2_2:55061256-55061275 | Msa0258590:intron | 45.0% | |
| AGAGGGAACAAACAGTGAAG+AGG | - | chr2_2:55061330-55061349 | Msa0258590:CDS | 45.0% | |
| !! | TTTTTGGGCTATCTGTGCTG+TGG | + | chr2_2:55061714-55061733 | None:intergenic | 45.0% |
| ! | GTTTTCTGCATTCTCTGTGG+AGG | - | chr2_2:55061823-55061842 | Msa0258590:intron | 45.0% |
| TTGACAAGAGCTCAACGGAA+GGG | + | chr2_2:55062012-55062031 | None:intergenic | 45.0% | |
| TTTGACAAGAGCTCAACGGA+AGG | + | chr2_2:55062013-55062032 | None:intergenic | 45.0% | |
| ! | TCGGTTTGACAAGAGCTCAA+CGG | + | chr2_2:55062017-55062036 | None:intergenic | 45.0% |
| ! | GGTTTGGAATCTAGGTTTGG+TGG | + | chr2_2:55062048-55062067 | None:intergenic | 45.0% |
| ! | CTGGGTTTGGAATCTAGGTT+TGG | + | chr2_2:55062051-55062070 | None:intergenic | 45.0% |
| ! | TCGATCTGGGTTTGGAATCT+AGG | + | chr2_2:55062056-55062075 | None:intergenic | 45.0% |
| !! | TCTGTGCATCAATGGACTGA+GGG | + | chr2_2:55062762-55062781 | None:intergenic | 45.0% |
| !! | TTCTGTGCATCAATGGACTG+AGG | + | chr2_2:55062763-55062782 | None:intergenic | 45.0% |
| TCCACAAGTTCATCAGACAC+AGG | - | chr2_2:55058593-55058612 | Msa0258590:intron | 45.0% | |
| TCCTGTGTCTGATGAACTTG+TGG | + | chr2_2:55058597-55058616 | Msa0258600:intron | 45.0% | |
| GCCAATTGCACAATGGTTCT+TGG | + | chr2_2:55063041-55063060 | None:intergenic | 45.0% | |
| TCTGCGCAGTTCTTGATCTT+TGG | + | chr2_2:55063390-55063409 | None:intergenic | 45.0% | |
| TTTGTGCAATATGACCGAGC+TGG | - | chr2_2:55063557-55063576 | Msa0258590:CDS | 45.0% | |
| CAATATGACCGAGCTGGATA+TGG | - | chr2_2:55063563-55063582 | Msa0258590:CDS | 45.0% | |
| CACTTTCTCCATATCCAGCT+CGG | + | chr2_2:55063574-55063593 | None:intergenic | 45.0% | |
| CTGGCTGATCAGCTTCAAAT+TGG | - | chr2_2:55063644-55063663 | Msa0258590:CDS | 45.0% | |
| ! | CTATGGGTTCATGTGCTACT+TGG | - | chr2_2:55063693-55063712 | Msa0258590:intron | 45.0% |
| CATCAGAATTGATCGGACCA+CGG | + | chr2_2:55064155-55064174 | None:intergenic | 45.0% | |
| GTCCGATCAATTCTGATGTG+CGG | - | chr2_2:55064157-55064176 | Msa0258590:intron | 45.0% | |
| GTAGAACAAGTTAAGGGACC+AGG | - | chr2_2:55064390-55064409 | Msa0258590:CDS | 45.0% | |
| TCTTTGTGATGATTGGAGGG+TGG | - | chr2_2:55064426-55064445 | Msa0258590:CDS | 45.0% | |
| !! | GAGGGTGGCTTTTGGAAAAT+GGG | - | chr2_2:55064441-55064460 | Msa0258590:CDS | 45.0% |
| GAACTTCTTCTGTGAGGGAA+TGG | + | chr2_2:55064493-55064512 | None:intergenic | 45.0% | |
| !! | AAGTAAAAAAAAAAAAAAAA+AGG | - | chr2_2:55061114-55061133 | Msa0258590:CDS | 5.0% |
| ! | AGTAACTTGTGCAGGCTTGC+AGG | - | chr2_2:55056776-55056795 | Msa0258590:intron | 50.0% |
| ! | GTAACTTGTGCAGGCTTGCA+GGG | - | chr2_2:55056777-55056796 | Msa0258590:intron | 50.0% |
| TATAGATGGCCATCTCTCCC+TGG | - | chr2_2:55056827-55056846 | Msa0258590:CDS | 50.0% | |
| ATAGATGGCCATCTCTCCCT+GGG | - | chr2_2:55056828-55056847 | Msa0258590:CDS | 50.0% | |
| ATCAAACTCCCAGGGAGAGA+TGG | + | chr2_2:55056839-55056858 | None:intergenic | 50.0% | |
| CCCTGGGAGTTTGATAAGAG+AGG | - | chr2_2:55056844-55056863 | Msa0258590:CDS | 50.0% | |
| !! | GGAGGGTAGCTTTTGGAAAG+TGG | - | chr2_2:55057216-55057235 | Msa0258590:intron | 50.0% |
| TTGTTTCAGGGAAGCTGCCA+TGG | - | chr2_2:55057345-55057364 | Msa0258590:intron | 50.0% | |
| CAAGCTATAAGGCTGTGCCA+TGG | + | chr2_2:55058005-55058024 | Msa0258600:intron | 50.0% | |
| GAAAAACCACGAGACCCCAT+AGG | + | chr2_2:55058213-55058232 | Msa0258600:intron | 50.0% | |
| GTTAGAGACCCTTGCTTTGC+AGG | + | chr2_2:55059914-55059933 | None:intergenic | 50.0% | |
| TGGGCTGTAGAATCTCTTCC+TGG | + | chr2_2:55060435-55060454 | None:intergenic | 50.0% | |
| CTGATCTGAAGGTTCCTCCA+AGG | - | chr2_2:55060512-55060531 | Msa0258590:intron | 50.0% | |
| ! | AGTCTGAGAGGAGCTCTAGT+TGG | - | chr2_2:55061213-55061232 | Msa0258590:intron | 50.0% |
| TCCTTTGGTTGTCCAGAAGG+AGG | - | chr2_2:55061259-55061278 | Msa0258590:intron | 50.0% | |
| TCCTCCTTCTGGACAACCAA+AGG | + | chr2_2:55061263-55061282 | None:intergenic | 50.0% | |
| CGATCTTAGGTTCCTCCTTC+TGG | + | chr2_2:55061274-55061293 | None:intergenic | 50.0% | |
| !! | TTTCTCTTATGGGCTGGTGC+CGG | - | chr2_2:55062467-55062486 | Msa0258590:intron | 50.0% |
| TGTTGAGAGAGGCTTCCCTA+AGG | - | chr2_2:55063064-55063083 | Msa0258590:CDS | 50.0% | |
| GGCCGCACATCAGAATTGAT+CGG | + | chr2_2:55064162-55064181 | None:intergenic | 50.0% | |
| ! | GATGATTGGAGGGTGGCTTT+TGG | - | chr2_2:55064433-55064452 | Msa0258590:CDS | 50.0% |
| !! | GGAGGGTGGCTTTTGGAAAA+TGG | - | chr2_2:55064440-55064459 | Msa0258590:CDS | 50.0% |
| GGTCTGTTCACTGCACCTCT+TGG | + | chr2_2:55060333-55060352 | None:intergenic | 55.0% | |
| !! | TTCTCTTATGGGCTGGTGCC+GGG | - | chr2_2:55062468-55062487 | Msa0258590:intron | 55.0% |
| CTTGTGCAGGCTTGCAGGGT+TGG | - | chr2_2:55056781-55056800 | Msa0258590:intron | 60.0% | |
| AAGAGGCCTATGGGGTCTCG+TGG | - | chr2_2:55058204-55058223 | Msa0258590:intron | 60.0% | |
| TGGAGCAGAATTGGGCTGCC+CGG | + | chr2_2:55062489-55062508 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 55055259 | 55064687 | 55055259 | ID=Msa0258590;Name=Msa0258590 |
| chr2_2 | mRNA | 55055259 | 55064687 | 55055259 | ID=Msa0258590-mRNA-1;Parent=Msa0258590;Name=Msa0258590-mRNA-1;_AED=0.31;_eAED=0.32;_QI=0|0|0|1|0.66|0.61|13|0|729 |
| chr2_2 | exon | 55064604 | 55064687 | 55064604 | ID=Msa0258590-mRNA-1:exon:16646;Parent=Msa0258590-mRNA-1 |
| chr2_2 | exon | 55064313 | 55064463 | 55064313 | ID=Msa0258590-mRNA-1:exon:16645;Parent=Msa0258590-mRNA-1 |
| chr2_2 | exon | 55063530 | 55063695 | 55063530 | ID=Msa0258590-mRNA-1:exon:16644;Parent=Msa0258590-mRNA-1 |
| chr2_2 | exon | 55062895 | 55063114 | 55062895 | ID=Msa0258590-mRNA-1:exon:16643;Parent=Msa0258590-mRNA-1 |
| chr2_2 | exon | 55062554 | 55062776 | 55062554 | ID=Msa0258590-mRNA-1:exon:16642;Parent=Msa0258590-mRNA-1 |
| chr2_2 | exon | 55061308 | 55061429 | 55061308 | ID=Msa0258590-mRNA-1:exon:16641;Parent=Msa0258590-mRNA-1 |
| chr2_2 | exon | 55060988 | 55061194 | 55060988 | ID=Msa0258590-mRNA-1:exon:16640;Parent=Msa0258590-mRNA-1 |
| chr2_2 | exon | 55060773 | 55060874 | 55060773 | ID=Msa0258590-mRNA-1:exon:16639;Parent=Msa0258590-mRNA-1 |
| chr2_2 | exon | 55057044 | 55057136 | 55057044 | ID=Msa0258590-mRNA-1:exon:16638;Parent=Msa0258590-mRNA-1 |
| chr2_2 | exon | 55056827 | 55056950 | 55056827 | ID=Msa0258590-mRNA-1:exon:16637;Parent=Msa0258590-mRNA-1 |
| chr2_2 | exon | 55056205 | 55056418 | 55056205 | ID=Msa0258590-mRNA-1:exon:16636;Parent=Msa0258590-mRNA-1 |
| chr2_2 | exon | 55055896 | 55056085 | 55055896 | ID=Msa0258590-mRNA-1:exon:16635;Parent=Msa0258590-mRNA-1 |
| chr2_2 | exon | 55055259 | 55055552 | 55055259 | ID=Msa0258590-mRNA-1:exon:16634;Parent=Msa0258590-mRNA-1 |
| chr2_2 | CDS | 55064604 | 55064687 | 55064604 | ID=Msa0258590-mRNA-1:cds;Parent=Msa0258590-mRNA-1 |
| chr2_2 | CDS | 55064313 | 55064463 | 55064313 | ID=Msa0258590-mRNA-1:cds;Parent=Msa0258590-mRNA-1 |
| chr2_2 | CDS | 55063530 | 55063695 | 55063530 | ID=Msa0258590-mRNA-1:cds;Parent=Msa0258590-mRNA-1 |
| chr2_2 | CDS | 55062895 | 55063114 | 55062895 | ID=Msa0258590-mRNA-1:cds;Parent=Msa0258590-mRNA-1 |
| chr2_2 | CDS | 55062554 | 55062776 | 55062554 | ID=Msa0258590-mRNA-1:cds;Parent=Msa0258590-mRNA-1 |
| chr2_2 | CDS | 55061308 | 55061429 | 55061308 | ID=Msa0258590-mRNA-1:cds;Parent=Msa0258590-mRNA-1 |
| chr2_2 | CDS | 55060988 | 55061194 | 55060988 | ID=Msa0258590-mRNA-1:cds;Parent=Msa0258590-mRNA-1 |
| chr2_2 | CDS | 55060773 | 55060874 | 55060773 | ID=Msa0258590-mRNA-1:cds;Parent=Msa0258590-mRNA-1 |
| chr2_2 | CDS | 55057044 | 55057136 | 55057044 | ID=Msa0258590-mRNA-1:cds;Parent=Msa0258590-mRNA-1 |
| chr2_2 | CDS | 55056827 | 55056950 | 55056827 | ID=Msa0258590-mRNA-1:cds;Parent=Msa0258590-mRNA-1 |
| chr2_2 | CDS | 55056205 | 55056418 | 55056205 | ID=Msa0258590-mRNA-1:cds;Parent=Msa0258590-mRNA-1 |
| chr2_2 | CDS | 55055896 | 55056085 | 55055896 | ID=Msa0258590-mRNA-1:cds;Parent=Msa0258590-mRNA-1 |
| chr2_2 | CDS | 55055259 | 55055552 | 55055259 | ID=Msa0258590-mRNA-1:cds;Parent=Msa0258590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
