AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1205510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1205510 MtrunA17_Chr4g0054791 96.226 318 12 0 6 323 1 318 0.0 640
Msa1205510 MtrunA17_Chr5g0400461 61.739 345 95 9 6 323 1 335 4.95e-136 389
Msa1205510 MtrunA17_Chr6g0481091 64.516 155 52 1 11 165 6 157 6.75e-68 212
Msa1205510 MtrunA17_Chr5g0433781 61.688 154 56 1 11 164 6 156 2.11e-62 209
Msa1205510 MtrunA17_Chr2g0309891 59.006 161 62 2 6 165 1 158 3.59e-62 201
Msa1205510 MtrunA17_Chr3g0109821 53.191 188 73 4 11 196 6 180 6.76e-62 208
Msa1205510 MtrunA17_Chr5g0405211 44.554 202 100 5 9 209 6 196 1.15e-51 174
Msa1205510 MtrunA17_Chr1g0201021 55.921 152 64 1 13 164 21 169 2.12e-51 178
Msa1205510 MtrunA17_Chr1g0200561 50.307 163 75 3 9 170 17 174 2.01e-50 171
Msa1205510 MtrunA17_Chr8g0372121 49.068 161 76 3 6 165 1 156 2.40e-49 167
Msa1205510 MtrunA17_Chr5g0428991 55.346 159 66 3 11 168 25 179 3.50e-49 173
Msa1205510 MtrunA17_Chr4g0056541 51.613 155 69 3 11 164 7 156 8.83e-49 167
Msa1205510 MtrunA17_Chr4g0018391 49.123 171 76 4 11 180 7 167 8.86e-49 166
Msa1205510 MtrunA17_Chr3g0128151 53.374 163 71 3 11 172 22 180 1.04e-48 171
Msa1205510 MtrunA17_Chr3g0128111 51.250 160 73 3 14 172 45 200 1.09e-48 163
Msa1205510 MtrunA17_Chr3g0130101 48.171 164 82 1 7 170 3 163 3.75e-48 165
Msa1205510 MtrunA17_Chr5g0398971 43.367 196 94 5 11 201 7 190 4.68e-48 164
Msa1205510 MtrunA17_Chr7g0252971 45.304 181 83 4 11 181 8 182 8.89e-48 163
Msa1205510 MtrunA17_Chr8g0384721 39.916 238 122 7 6 233 1 227 1.90e-47 161
Msa1205510 MtrunA17_Chr4g0060931 47.619 168 81 3 11 176 17 179 2.07e-47 163
Msa1205510 MtrunA17_Chr4g0076731 51.266 158 71 3 7 164 50 201 2.64e-47 164
Msa1205510 MtrunA17_Chr2g0318081 45.763 177 91 2 11 187 16 187 3.82e-47 162
Msa1205510 MtrunA17_Chr3g0091921 47.929 169 81 3 10 176 15 178 4.19e-47 160
Msa1205510 MtrunA17_Chr2g0309331 48.235 170 76 5 6 169 2 165 4.51e-47 162
Msa1205510 MtrunA17_Chr8g0364791 48.125 160 80 1 11 170 6 162 6.48e-47 164
Msa1205510 MtrunA17_Chr4g0017921 51.592 157 65 4 11 164 8 156 8.37e-47 161
Msa1205510 MtrunA17_Chr2g0318101 47.879 165 72 4 11 164 15 176 8.37e-47 161
Msa1205510 MtrunA17_Chr2g0326361 46.067 178 87 4 11 183 14 187 1.12e-46 160
Msa1205510 MtrunA17_Chr3g0130731 48.276 174 80 4 6 175 1 168 2.14e-46 158
Msa1205510 MtrunA17_Chr4g0047841 53.191 141 63 2 11 151 15 152 8.56e-46 158
Msa1205510 MtrunA17_Chr1g0197361 52.941 153 67 4 13 164 10 158 1.10e-45 163
Msa1205510 MtrunA17_Chr7g0214071 50.000 154 69 3 11 164 15 160 2.94e-45 154
Msa1205510 MtrunA17_Chr4g0042561 48.795 166 74 4 11 171 9 168 4.14e-45 154
Msa1205510 MtrunA17_Chr8g0346001 42.857 189 91 4 11 187 15 198 4.36e-45 159
Msa1205510 MtrunA17_Chr6g0484441 43.678 174 85 4 11 181 5 168 6.02e-45 155
Msa1205510 MtrunA17_Chr2g0316971 55.639 133 56 2 9 141 21 150 7.69e-45 157
Msa1205510 MtrunA17_Chr8g0359921 50.920 163 71 4 11 170 14 170 8.91e-45 155
Msa1205510 MtrunA17_Chr5g0417791 48.521 169 76 4 11 174 3 165 1.12e-44 153
Msa1205510 MtrunA17_Chr3g0124761 45.977 174 85 3 11 181 7 174 1.20e-44 154
Msa1205510 MtrunA17_Chr5g0417001 42.157 204 106 5 10 204 13 213 1.26e-44 156
Msa1205510 MtrunA17_Chr3g0092671 51.613 155 68 5 13 165 7 156 1.71e-44 159
Msa1205510 MtrunA17_Chr7g0263931 39.111 225 126 5 11 228 11 231 2.85e-44 154
Msa1205510 MtrunA17_Chr8g0361731 45.506 178 84 5 6 174 10 183 3.05e-44 155
Msa1205510 MtrunA17_Chr1g0147421 40.865 208 113 6 11 216 27 226 3.07e-44 155
Msa1205510 MtrunA17_Chr6g0453451 47.853 163 78 3 11 171 20 177 3.20e-44 154
Msa1205510 MtrunA17_Chr3g0139331 40.845 213 119 4 11 221 11 218 4.72e-44 154
Msa1205510 MtrunA17_Chr8g0384201 45.625 160 84 1 11 170 6 162 7.06e-44 157
Msa1205510 MtrunA17_Chr1g0197351 51.553 161 69 2 11 165 42 199 1.50e-43 155
Msa1205510 MtrunA17_Chr6g0453131 47.853 163 72 3 11 164 15 173 1.87e-43 153
Msa1205510 MtrunA17_Chr6g0461661 50.735 136 64 2 11 146 18 150 5.24e-43 152
Msa1205510 MtrunA17_Chr7g0253011 44.643 168 88 3 11 175 17 182 3.96e-42 150
Msa1205510 MtrunA17_Chr4g0038751 48.684 152 71 3 13 164 17 161 7.59e-41 144
Msa1205510 MtrunA17_Chr1g0183741 39.437 213 102 5 8 202 7 210 1.48e-40 143
Msa1205510 MtrunA17_Chr3g0144271 55.303 132 55 3 11 141 23 151 1.73e-40 146
Msa1205510 MtrunA17_Chr7g0217711 49.630 135 63 2 7 141 15 144 2.90e-40 139
Msa1205510 MtrunA17_Chr2g0311661 36.864 236 120 8 13 226 23 251 3.61e-40 142
Msa1205510 MtrunA17_Chr5g0442771 37.559 213 110 4 7 205 14 217 7.81e-40 142
Msa1205510 MtrunA17_Chr2g0311651 39.234 209 104 6 13 199 24 231 1.82e-39 141
Msa1205510 MtrunA17_Chr7g0217721 49.630 135 63 2 7 141 15 144 3.51e-39 141
Msa1205510 MtrunA17_Chr7g0261411 48.077 156 70 4 8 161 7 153 4.45e-39 139
Msa1205510 MtrunA17_Chr2g0312321 47.093 172 76 6 5 173 5 164 4.83e-39 140
Msa1205510 MtrunA17_Chr8g0345671 52.672 131 59 3 11 140 11 139 2.66e-37 137
Msa1205510 MtrunA17_Chr2g0321741 43.017 179 83 6 31 204 12 176 5.14e-37 135
Msa1205510 MtrunA17_Chr8g0385991 43.750 176 82 5 11 177 14 181 1.30e-35 128
Msa1205510 MtrunA17_Chr8g0345711 44.737 152 78 4 1 148 2 151 2.75e-35 126
Msa1205510 MtrunA17_Chr8g0345691 45.752 153 75 5 11 162 12 157 6.96e-34 128
Msa1205510 MtrunA17_Chr3g0131911 44.720 161 78 4 11 164 14 170 6.30e-33 122
Msa1205510 MtrunA17_Chr4g0026141 41.772 158 84 5 10 161 4 159 1.11e-32 122
Msa1205510 MtrunA17_Chr2g0321631 42.767 159 78 6 12 161 5 159 1.16e-32 121
Msa1205510 MtrunA17_Chr8g0345731 42.405 158 80 4 10 164 23 172 2.15e-32 118
Msa1205510 MtrunA17_Chr7g0266701 34.746 236 115 10 11 210 4 236 1.04e-31 119
Msa1205510 MtrunA17_Chr4g0050701 46.565 131 59 3 11 141 11 130 4.90e-31 115
Msa1205510 MtrunA17_Chr3g0113001 49.074 108 49 3 66 170 18 122 1.33e-27 109
Msa1205510 MtrunA17_Chr8g0345721 39.412 170 70 5 14 152 38 205 1.91e-25 101
Msa1205510 MtrunA17_Chr8g0345701 40.690 145 67 5 11 140 7 147 1.17e-23 95.5
Msa1205510 MtrunA17_Chr8g0345741 42.500 120 66 3 22 140 2 119 1.33e-23 94.7
Msa1205510 MtrunA17_Chr3g0113031 48.454 97 43 3 78 170 5 98 9.15e-21 90.1
Msa1205510 MtrunA17_Chr7g0243371 46.914 81 42 1 61 141 12 91 4.13e-19 81.6
Msa1205510 MtrunA17_Chr8g0384351 33.889 180 94 7 11 190 10 164 6.39e-17 77.4
Msa1205510 MtrunA17_Chr7g0251651 26.943 193 119 5 7 194 14 189 4.93e-13 67.0
Msa1205510 MtrunA17_Chr3g0130321 31.818 132 79 3 11 141 7 128 7.57e-13 66.6
Msa1205510 MtrunA17_Chr1g0194791 61.702 47 17 1 13 58 48 94 2.42e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1205510 AT4G17980.2 54.667 300 121 7 6 301 1 289 1.25e-100 298
Msa1205510 AT4G17980.1 61.382 246 83 4 6 247 1 238 7.93e-99 292
Msa1205510 AT5G46590.1 52.013 298 132 5 6 301 1 289 3.56e-96 286
Msa1205510 AT5G46590.2 49.832 297 129 5 6 301 1 278 1.59e-90 272
Msa1205510 AT1G32510.1 60.086 233 73 5 6 232 1 219 3.16e-84 256
Msa1205510 AT3G17730.1 56.983 179 68 2 11 183 6 181 2.86e-66 209
Msa1205510 AT1G54330.1 65.806 155 47 2 11 165 6 154 4.22e-65 207
Msa1205510 AT1G65910.1 60.870 161 60 1 11 171 6 163 1.98e-64 214
Msa1205510 AT3G03200.1 60.625 160 59 2 6 164 1 157 3.48e-62 205
Msa1205510 AT5G17260.1 59.375 160 61 2 6 164 1 157 5.19e-62 204
Msa1205510 AT3G10500.1 37.500 304 145 5 11 313 9 268 1.11e-52 182
Msa1205510 AT5G04410.1 54.839 155 67 1 11 165 9 160 1.43e-51 179
Msa1205510 AT5G22290.1 51.235 162 69 4 5 166 15 166 4.05e-51 172
Msa1205510 AT1G12260.2 46.500 200 92 6 11 205 7 196 3.62e-50 170
Msa1205510 AT2G18060.3 47.458 177 81 4 6 181 4 169 3.85e-50 171
Msa1205510 AT2G18060.1 47.458 177 81 4 6 181 4 169 3.85e-50 171
Msa1205510 AT1G71930.2 43.147 197 101 4 5 195 3 194 4.40e-50 169
Msa1205510 AT1G71930.1 43.147 197 101 4 5 195 3 194 4.40e-50 169
Msa1205510 AT1G33060.2 52.439 164 75 1 1 164 14 174 5.02e-50 176
Msa1205510 AT1G33060.1 52.439 164 75 1 1 164 14 174 5.58e-50 176
Msa1205510 AT3G10490.1 53.846 156 68 2 11 165 27 179 6.06e-50 166
Msa1205510 AT4G35580.1 56.774 155 62 3 11 164 9 159 6.26e-50 174
Msa1205510 AT4G35580.3 56.774 155 62 3 11 164 9 159 7.74e-50 174
Msa1205510 AT4G35580.2 56.774 155 62 3 11 164 9 159 8.12e-50 174
Msa1205510 AT4G36160.1 52.258 155 68 3 11 164 10 159 8.87e-50 170
Msa1205510 AT4G36160.3 52.258 155 68 3 11 164 10 159 8.87e-50 170
Msa1205510 AT1G12260.1 46.500 200 92 6 11 205 7 196 9.35e-50 171
Msa1205510 AT4G36160.2 52.258 155 68 3 11 164 14 163 9.74e-50 170
Msa1205510 AT5G07680.2 49.405 168 78 3 11 176 3 165 1.05e-49 168
Msa1205510 AT5G07680.1 49.405 168 78 3 11 176 17 179 1.22e-49 168
Msa1205510 AT3G44290.2 51.299 154 64 4 13 166 16 158 1.34e-49 165
Msa1205510 AT3G49530.2 52.229 157 71 3 11 166 13 166 2.30e-49 170
Msa1205510 AT3G49530.1 52.229 157 71 3 11 166 13 166 6.08e-49 170
Msa1205510 AT3G10480.2 53.548 155 69 1 11 165 27 178 9.77e-49 169
Msa1205510 AT3G10480.1 53.205 156 69 2 11 165 27 179 1.49e-48 169
Msa1205510 AT5G09330.5 47.273 165 84 1 6 170 1 162 1.60e-48 169
Msa1205510 AT5G09330.2 47.273 165 84 1 6 170 1 162 1.60e-48 169
Msa1205510 AT5G09330.4 47.273 165 84 1 6 170 1 162 1.60e-48 169
Msa1205510 AT5G09330.3 47.273 165 84 1 6 170 1 162 1.60e-48 169
Msa1205510 AT5G09330.1 47.273 165 84 1 6 170 1 162 1.60e-48 169
Msa1205510 AT5G66300.1 51.282 156 71 3 11 165 12 163 1.63e-48 164
Msa1205510 AT3G10490.2 53.846 156 68 2 11 165 27 179 2.07e-48 168
Msa1205510 AT3G44290.1 51.299 154 64 4 13 166 16 158 2.59e-48 165
Msa1205510 AT2G02450.2 50.968 155 70 3 10 164 50 198 2.99e-48 167
Msa1205510 AT2G02450.1 50.968 155 70 3 10 164 50 198 3.12e-48 166
Msa1205510 AT1G62700.1 51.613 155 69 3 11 164 7 156 3.25e-48 166
Msa1205510 AT1G62700.2 51.613 155 69 3 11 164 7 156 3.25e-48 166
Msa1205510 AT5G61430.1 46.893 177 87 3 2 176 7 178 3.93e-48 164
Msa1205510 AT2G24430.2 35.275 309 167 8 3 287 8 307 4.28e-48 164
Msa1205510 AT2G24430.1 35.275 309 167 8 3 287 8 307 4.28e-48 164
Msa1205510 AT1G32770.1 38.462 260 131 9 11 257 16 259 5.82e-48 165
Msa1205510 AT4G27410.2 49.102 167 80 2 11 177 14 175 6.07e-48 163
Msa1205510 AT5G64060.1 46.875 160 82 1 11 170 6 162 6.51e-48 164
Msa1205510 AT5G24590.2 51.266 158 75 1 9 166 11 166 6.20e-47 164
Msa1205510 AT5G62380.2 46.111 180 86 4 9 187 5 174 6.56e-47 162
Msa1205510 AT5G62380.1 46.111 180 86 4 9 187 5 174 6.56e-47 162
Msa1205510 AT4G10350.1 50.289 173 74 6 11 177 9 175 1.82e-46 160
Msa1205510 AT5G39610.1 47.674 172 77 4 11 177 20 183 2.68e-46 158
Msa1205510 AT3G61910.1 42.929 198 92 5 11 192 11 203 2.90e-46 160
Msa1205510 AT1G52890.1 45.506 178 90 3 11 188 14 184 3.85e-46 159
Msa1205510 AT3G18400.1 47.826 161 78 3 11 171 5 159 4.47e-46 159
Msa1205510 AT3G15500.1 46.988 166 83 2 11 176 14 174 4.92e-46 159
Msa1205510 AT3G15170.1 43.519 216 105 5 9 219 18 221 5.62e-46 158
Msa1205510 AT1G79580.3 52.866 157 64 4 11 164 17 166 6.25e-46 160
Msa1205510 AT1G79580.5 52.866 157 64 4 11 164 17 166 6.25e-46 160
Msa1205510 AT1G79580.4 52.866 157 64 4 11 164 17 166 6.25e-46 160
Msa1205510 AT1G79580.2 52.866 157 64 4 11 164 17 166 6.25e-46 160
Msa1205510 AT1G79580.1 52.866 157 64 4 11 164 17 166 6.25e-46 160
Msa1205510 AT1G61110.1 48.538 171 72 5 11 169 16 182 6.34e-46 159
Msa1205510 AT2G27300.1 50.327 153 65 4 11 163 14 155 1.27e-45 158
Msa1205510 AT3G04070.2 48.503 167 75 4 11 168 10 174 6.01e-45 156
Msa1205510 AT1G69490.1 49.390 164 72 4 11 169 9 166 6.88e-45 154
Msa1205510 AT4G27410.3 46.154 182 80 3 11 177 14 192 8.01e-45 155
Msa1205510 AT1G33280.1 49.682 157 68 5 11 164 8 156 8.53e-45 155
Msa1205510 AT3G29035.1 54.348 138 58 2 11 148 24 156 8.94e-45 155
Msa1205510 AT2G46770.1 43.523 193 77 6 11 182 16 197 1.20e-44 156
Msa1205510 AT5G08790.1 39.916 238 124 6 11 242 7 231 1.70e-44 154
Msa1205510 AT2G33480.2 51.299 154 65 3 11 164 15 158 3.99e-44 152
Msa1205510 AT2G33480.1 52.258 155 64 4 11 164 15 160 5.38e-44 152
Msa1205510 AT1G34190.1 54.745 137 59 1 8 144 13 146 7.10e-44 158
Msa1205510 AT3G04070.1 52.899 138 61 2 11 146 10 145 7.54e-44 154
Msa1205510 AT3G10480.3 44.974 189 67 3 11 165 27 212 1.12e-43 157
Msa1205510 AT1G01720.1 48.485 165 73 4 11 170 7 164 1.15e-43 152
Msa1205510 AT3G04060.1 46.386 166 83 3 11 174 20 181 1.59e-43 152
Msa1205510 AT1G76420.1 48.765 162 79 3 11 172 22 179 1.75e-43 152
Msa1205510 AT2G43000.1 48.366 153 73 3 13 164 20 167 2.72e-43 150
Msa1205510 AT5G63790.1 43.979 191 94 4 11 196 50 232 7.82e-43 150
Msa1205510 AT5G63790.2 43.979 191 94 4 11 196 60 242 1.10e-42 150
Msa1205510 AT1G34180.3 49.682 157 76 1 8 164 13 166 1.42e-42 152
Msa1205510 AT3G15510.1 45.238 168 78 4 15 171 21 185 1.60e-42 150
Msa1205510 AT5G53950.1 52.941 136 61 2 11 146 17 149 2.77e-42 150
Msa1205510 AT1G26870.1 47.191 178 81 5 6 174 12 185 3.31e-42 151
Msa1205510 AT1G34180.1 49.682 157 76 1 8 164 13 166 8.09e-42 152
Msa1205510 AT5G39820.1 52.273 132 60 2 10 141 19 147 1.02e-41 148
Msa1205510 AT5G18270.2 46.951 164 73 4 11 168 21 176 1.04e-41 148
Msa1205510 AT5G18270.1 46.341 164 74 4 11 168 21 176 1.62e-41 147
Msa1205510 AT2G17040.1 44.737 152 77 2 13 164 8 152 5.11e-41 144
Msa1205510 AT1G52880.1 47.239 163 75 4 15 168 21 181 1.76e-40 144
Msa1205510 AT1G77450.1 40.796 201 103 5 11 205 10 200 2.94e-40 142
Msa1205510 AT5G13180.1 54.198 131 54 2 11 141 14 138 3.36e-40 141
Msa1205510 AT1G32870.1 55.714 140 57 2 2 141 1 135 3.50e-40 147
Msa1205510 AT1G32870.2 55.714 140 57 2 2 141 1 135 3.55e-40 147
Msa1205510 AT1G32870.3 55.319 141 58 2 1 141 36 171 7.36e-40 147
Msa1205510 AT3G12977.1 45.963 161 81 3 6 165 13 168 8.55e-40 141
Msa1205510 AT1G34180.4 46.154 169 76 2 8 164 13 178 1.97e-39 144
Msa1205510 AT1G34180.2 46.154 169 76 2 8 164 13 178 1.06e-38 144
Msa1205510 AT3G12910.1 38.182 220 104 6 7 198 17 232 9.37e-38 136
Msa1205510 AT1G56010.2 45.509 167 78 5 5 165 13 172 1.06e-37 137
Msa1205510 AT5G04395.1 46.154 143 66 1 11 142 28 170 8.89e-37 130
Msa1205510 AT4G28530.1 43.333 180 73 6 8 168 7 176 1.98e-35 132
Msa1205510 AT5G22380.1 36.000 200 107 6 14 194 8 205 4.11e-30 114
Msa1205510 AT5G61430.2 49.550 111 51 2 68 176 8 115 1.43e-29 114
Msa1205510 AT3G44350.2 33.645 214 124 8 8 206 2 212 3.95e-27 107
Msa1205510 AT4G01550.1 38.636 176 101 4 14 188 7 176 1.07e-26 109
Msa1205510 AT5G64530.2 43.609 133 60 4 11 143 3 120 1.46e-26 103
Msa1205510 AT5G64530.1 43.609 133 60 4 11 143 3 120 3.03e-26 103
Msa1205510 AT1G02230.1 34.503 171 101 5 12 180 4 165 5.67e-26 106
Msa1205510 AT4G10350.2 52.212 113 47 4 68 177 20 128 7.52e-26 104
Msa1205510 AT4G01520.1 35.000 160 97 3 12 169 5 159 3.57e-25 103
Msa1205510 AT3G12977.2 50.505 99 45 2 68 165 20 115 6.82e-25 100
Msa1205510 AT4G28530.2 45.614 114 42 3 8 104 7 117 2.53e-24 101
Msa1205510 AT1G02250.1 37.126 167 95 5 12 175 4 163 4.08e-24 101
Msa1205510 AT4G01540.4 34.337 166 99 4 6 169 2 159 9.63e-24 100
Msa1205510 AT4G01540.3 34.337 166 99 4 6 169 2 159 2.20e-23 100
Msa1205510 AT4G01540.2 30.542 203 128 5 6 203 2 196 2.91e-23 99.8
Msa1205510 AT4G01540.1 34.337 166 99 4 6 169 2 159 3.59e-23 99.8
Msa1205510 AT1G56010.1 50.485 103 41 3 68 165 8 105 4.44e-23 96.7
Msa1205510 AT3G44350.1 37.324 142 84 4 8 146 2 141 7.02e-23 93.6
Msa1205510 AT2G33480.3 50.000 98 44 3 68 164 10 103 2.23e-22 93.6
Msa1205510 AT3G04420.2 38.462 130 75 3 12 139 4 130 7.90e-22 94.0
Msa1205510 AT3G04420.1 38.462 130 75 3 12 139 4 130 1.40e-21 94.0
Msa1205510 AT1G01010.1 30.348 201 120 8 14 202 6 198 9.12e-19 87.0
Msa1205510 AT1G02220.1 33.835 133 74 4 12 139 4 127 2.96e-17 82.0
Msa1205510 AT3G10490.4 49.383 81 37 2 86 165 2 79 4.56e-16 78.2
Msa1205510 AT3G10490.3 49.383 81 37 2 86 165 2 79 4.56e-16 78.2
Msa1205510 AT3G56530.1 32.026 153 96 4 11 161 52 198 6.68e-16 77.4
Msa1205510 AT3G55210.1 33.793 145 79 4 10 141 10 150 7.51e-16 77.0
Msa1205510 AT5G50820.1 31.847 157 93 5 11 163 17 163 5.64e-15 72.8
Msa1205510 AT5G14000.2 32.117 137 84 3 8 142 12 141 7.33e-15 71.6
Msa1205510 AT5G14000.1 27.895 190 125 4 8 195 12 191 1.46e-14 72.0
Msa1205510 AT2G43000.2 40.659 91 50 2 75 164 2 89 1.73e-13 68.6
Msa1205510 AT2G18060.2 44.595 74 36 2 91 164 2 70 2.11e-13 69.7
Msa1205510 AT5G22290.2 46.667 75 31 3 92 166 2 67 6.99e-13 67.8

Find 67 sgRNAs with CRISPR-Local

Find 204 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATGGACTATAATGGAAAT+TGG 0.146738 8_1:+61869202 Msa1205510:CDS
CTATTTGTTCTTGATCCATT+TGG 0.249925 8_1:-61868195 None:intergenic
TCAGATAATGTAAGTCAAAA+TGG 0.276555 8_1:+61869144 Msa1205510:CDS
AAACCAATCCTTCAAACTTC+TGG 0.290622 8_1:+61868848 Msa1205510:CDS
GTTTGAAGGATTGGTTTCTA+TGG 0.297007 8_1:-61868842 None:intergenic
TATTTGTTCTTGATCCATTT+GGG 0.300747 8_1:-61868194 None:intergenic
GAAGAATCAAGAATCATATC+AGG 0.310654 8_1:-61868877 None:intergenic
GGGAATTTCATGGACTATAA+TGG 0.316926 8_1:+61869195 Msa1205510:CDS
TGAGGTCTCACTTCCATTGA+TGG 0.347267 8_1:-61868728 None:intergenic
ATTATATGTACCTTAAAATA+TGG 0.351863 8_1:-61868405 None:intergenic
CAAGCAAGTCACCTGAATAA+TGG 0.364530 8_1:+61868778 Msa1205510:CDS
ATTTGATTATAAACCTCATA+AGG 0.374916 8_1:-61869231 None:intergenic
GGCTTTCCAGTAGCCAGCTT+TGG 0.387525 8_1:-61868223 None:intergenic
GATCCAGAAGTTTGAAGGAT+TGG 0.396961 8_1:-61868851 None:intergenic
AAGTTCTCAAGGGAATTTCA+TGG 0.401113 8_1:+61869185 Msa1205510:CDS
AACCATTCTAAATCTCGTTT+CGG 0.406610 8_1:-61868144 None:intergenic
CTTTAGGCGATAGAACTAAC+TGG 0.414854 8_1:+61868337 Msa1205510:CDS
CATGGACTATAATGGAAATT+GGG 0.418240 8_1:+61869203 Msa1205510:CDS
TATCTTGGAAGGGCTCCTTT+AGG 0.429258 8_1:+61868321 Msa1205510:CDS
AAATTGGGATGTTCCTTATG+AGG 0.431601 8_1:+61869218 Msa1205510:CDS
GAGCTACCAAAGCTGGCTAC+TGG 0.434106 8_1:+61868217 Msa1205510:CDS
ACATGGTTAAACTCGGCAAT+TGG 0.434194 8_1:-61868817 None:intergenic
TTTGCAGTTGCCTGTGATAG+TGG 0.456084 8_1:-61868286 None:intergenic
TTCCCTTGAGAACTTGAGTA+AGG 0.464374 8_1:-61869177 None:intergenic
GGGGAGATCCAGAAGTTTGA+AGG 0.472729 8_1:-61868856 None:intergenic
TACCGAAACGAGATTTAGAA+TGG 0.473383 8_1:+61868142 Msa1205510:CDS
ACAAATAGAGCTACCAAAGC+TGG 0.483596 8_1:+61868210 Msa1205510:CDS
TATGATTCTTGATTCTTCAA+AGG 0.498256 8_1:+61868882 Msa1205510:CDS
CTAGTTCTTCATCAGTTGGA+TGG 0.505033 8_1:-61867799 None:intergenic
CCAACTGATGAAGAACTAGT+TGG 0.507449 8_1:+61867803 Msa1205510:CDS
CAGTTAGTTCTATCGCCTAA+AGG 0.507948 8_1:-61868336 None:intergenic
CCAACTAGTTCTTCATCAGT+TGG 0.511441 8_1:-61867803 None:intergenic
CGAGATCTAAAGTACCCAAA+TGG 0.514202 8_1:+61868180 Msa1205510:CDS
AAATTTGAGTAGGATAAAGT+AGG 0.517258 8_1:-61869102 None:intergenic
ATACTATCTTAAAAGAAAAG+TGG 0.531146 8_1:+61867826 Msa1205510:CDS
TCACCTTACTCAAGTTCTCA+AGG 0.532937 8_1:+61869174 Msa1205510:CDS
TTTGATCCATGGGAGTTGCC+TGG 0.534126 8_1:+61867899 Msa1205510:CDS
TGCCTTGGTGATTCACAGCT+AGG 0.544811 8_1:-61869054 None:intergenic
GTTGCAACAAGTTCCATCAA+TGG 0.552945 8_1:+61868715 Msa1205510:CDS
GCTGGCTACTGGAAAGCCAC+TGG 0.557528 8_1:+61868228 Msa1205510:CDS
TTCAGCATTAAAATTTGAGT+AGG 0.564818 8_1:-61869112 None:intergenic
AAGAATCAAGAATCATATCA+GGG 0.565558 8_1:-61868876 None:intergenic
ATATGTTCCGATGATTGCCT+TGG 0.568295 8_1:-61869069 None:intergenic
GATTGGTTTCTATGGAAACA+TGG 0.569920 8_1:-61868834 None:intergenic
CCTTAAAATATGGAGAGTCT+TGG 0.569933 8_1:-61868395 None:intergenic
AAAAGAATGAGAAGAGCAAG+AGG 0.571312 8_1:+61868692 Msa1205510:CDS
TGAATCACCAAGGCAATCAT+CGG 0.573034 8_1:+61869062 Msa1205510:CDS
TGTAGTTCATCCACTATCAC+AGG 0.581968 8_1:+61868276 Msa1205510:CDS
GTTGGATGGAAACGAAAACC+TGG 0.593509 8_1:-61867785 None:intergenic
ACTGGATCATGCAAGAGTAT+CGG 0.596245 8_1:+61868355 Msa1205510:CDS
TATGGAAACATGGTTAAACT+CGG 0.597037 8_1:-61868824 None:intergenic
CACCTTACTCAAGTTCTCAA+GGG 0.598211 8_1:+61869175 Msa1205510:CDS
AGATTACCAGGCAACTCCCA+TGG 0.598328 8_1:-61867905 None:intergenic
GAATAATGGATCACAAAATG+TGG 0.600990 8_1:+61868792 Msa1205510:CDS
GTCACTTGAGAATCTCATTG+AGG 0.608676 8_1:-61868746 None:intergenic
TATCTTAAAAGAAAAGTGGA+AGG 0.610976 8_1:+61867830 Msa1205510:CDS
AGAGTCTTGGCTAAGATCAT+CGG 0.612585 8_1:-61868382 None:intergenic
AGAAACATTGCAATATAACA+TGG 0.616189 8_1:+61867745 None:intergenic
GAAGGAGCATTACTGCCACC+AGG 0.622199 8_1:+61867767 Msa1205510:CDS
CTTGGTGATTCACAGCTAGG+AGG 0.629774 8_1:-61869051 None:intergenic
ACATTGCAATATAACATGGA+AGG 0.636691 8_1:+61867749 Msa1205510:CDS
AAGAGAGAAAGATTGTGTGC+CGG 0.639026 8_1:+61868253 Msa1205510:CDS
AAAGAATGAGAAGAGCAAGA+GGG 0.661577 8_1:+61868693 Msa1205510:CDS
CTCCTAGCTGTGAATCACCA+AGG 0.670903 8_1:+61869052 Msa1205510:CDS
TGATAGTGGATGAACTACAC+CGG 0.698203 8_1:-61868272 None:intergenic
AGAATCAAGAATCATATCAG+GGG 0.707288 8_1:-61868875 None:intergenic
GGATGGAAACGAAAACCTGG+TGG 0.763193 8_1:-61867782 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATAATATGAACAAATT+CGG + chr8_1:61868926-61868945 Msa1205510:intron 10.0%
!! AATTATAATATGAACAAATT+CGG + chr8_1:61868926-61868945 Msa1205510:intron 10.0%
!! AATAGTATATTTCAAATGTA+AGG + chr8_1:61867981-61868000 Msa1205510:intron 15.0%
!! ATTATATGTACCTTAAAATA+TGG - chr8_1:61868408-61868427 None:intergenic 15.0%
!! AATAGTATATTTCAAATGTA+AGG + chr8_1:61867981-61868000 Msa1205510:intron 15.0%
!! ATTATATGTACCTTAAAATA+TGG - chr8_1:61868408-61868427 None:intergenic 15.0%
!! ATACTATCTTAAAAGAAAAG+TGG + chr8_1:61867826-61867845 Msa1205510:CDS 20.0%
!! AATTTGTAAAAATCAATCAC+TGG - chr8_1:61867881-61867900 None:intergenic 20.0%
!!! ATTTTTACAAATTTGATCCA+TGG + chr8_1:61867888-61867907 Msa1205510:CDS 20.0%
!!! TTTTTACAAATTTGATCCAT+GGG + chr8_1:61867889-61867908 Msa1205510:CDS 20.0%
!! ATTTGATTATAAACCTCATA+AGG - chr8_1:61869234-61869253 None:intergenic 20.0%
!! ATACTATCTTAAAAGAAAAG+TGG + chr8_1:61867826-61867845 Msa1205510:CDS 20.0%
!! AATTTGTAAAAATCAATCAC+TGG - chr8_1:61867881-61867900 None:intergenic 20.0%
!!! ATTTTTACAAATTTGATCCA+TGG + chr8_1:61867888-61867907 Msa1205510:CDS 20.0%
!!! TTTTTACAAATTTGATCCAT+GGG + chr8_1:61867889-61867908 Msa1205510:CDS 20.0%
!! ATTTGATTATAAACCTCATA+AGG - chr8_1:61869234-61869253 None:intergenic 20.0%
! TATCTTAAAAGAAAAGTGGA+AGG + chr8_1:61867830-61867849 Msa1205510:CDS 25.0%
! TTCAAATGTAAGGTTTGATA+TGG + chr8_1:61867991-61868010 Msa1205510:intron 25.0%
! TAAAAGATTCTATTTCACAC+AGG - chr8_1:61868041-61868060 None:intergenic 25.0%
! TTTCTGCATTGTTTATGATA+AGG + chr8_1:61868069-61868088 Msa1205510:intron 25.0%
! TATTTGTTCTTGATCCATTT+GGG - chr8_1:61868197-61868216 None:intergenic 25.0%
!!! AAAACACTTGTTTTCTATCT+TGG + chr8_1:61868306-61868325 Msa1205510:CDS 25.0%
! GAATGTTGAAAGACTAAATT+AGG + chr8_1:61868601-61868620 Msa1205510:intron 25.0%
!!! TCTCATTCTTTTTGATAACT+CGG - chr8_1:61868684-61868703 None:intergenic 25.0%
! AAGAATCAAGAATCATATCA+GGG - chr8_1:61868879-61868898 None:intergenic 25.0%
! TATGATTCTTGATTCTTCAA+AGG + chr8_1:61868882-61868901 Msa1205510:CDS 25.0%
! AGATTGAATGGCTATAATAT+GGG + chr8_1:61868956-61868975 Msa1205510:intron 25.0%
! AAATTTGAGTAGGATAAAGT+AGG - chr8_1:61869105-61869124 None:intergenic 25.0%
! TTCAGCATTAAAATTTGAGT+AGG - chr8_1:61869115-61869134 None:intergenic 25.0%
! TCAGATAATGTAAGTCAAAA+TGG + chr8_1:61869144-61869163 Msa1205510:CDS 25.0%
! TATCTTAAAAGAAAAGTGGA+AGG + chr8_1:61867830-61867849 Msa1205510:CDS 25.0%
! TTCAAATGTAAGGTTTGATA+TGG + chr8_1:61867991-61868010 Msa1205510:intron 25.0%
! TAAAAGATTCTATTTCACAC+AGG - chr8_1:61868041-61868060 None:intergenic 25.0%
! TTTCTGCATTGTTTATGATA+AGG + chr8_1:61868069-61868088 Msa1205510:intron 25.0%
! TATTTGTTCTTGATCCATTT+GGG - chr8_1:61868197-61868216 None:intergenic 25.0%
!!! AAAACACTTGTTTTCTATCT+TGG + chr8_1:61868306-61868325 Msa1205510:CDS 25.0%
! GAATGTTGAAAGACTAAATT+AGG + chr8_1:61868601-61868620 Msa1205510:intron 25.0%
!!! TCTCATTCTTTTTGATAACT+CGG - chr8_1:61868684-61868703 None:intergenic 25.0%
! AAGAATCAAGAATCATATCA+GGG - chr8_1:61868879-61868898 None:intergenic 25.0%
! TATGATTCTTGATTCTTCAA+AGG + chr8_1:61868882-61868901 Msa1205510:CDS 25.0%
! AGATTGAATGGCTATAATAT+GGG + chr8_1:61868956-61868975 Msa1205510:intron 25.0%
! AAATTTGAGTAGGATAAAGT+AGG - chr8_1:61869105-61869124 None:intergenic 25.0%
! TTCAGCATTAAAATTTGAGT+AGG - chr8_1:61869115-61869134 None:intergenic 25.0%
! TCAGATAATGTAAGTCAAAA+TGG + chr8_1:61869144-61869163 Msa1205510:CDS 25.0%
ACATTGCAATATAACATGGA+AGG + chr8_1:61867749-61867768 Msa1205510:CDS 30.0%
ATGTGAAATTGAAGATTACC+AGG - chr8_1:61867920-61867939 None:intergenic 30.0%
AACCATTCTAAATCTCGTTT+CGG - chr8_1:61868147-61868166 None:intergenic 30.0%
CTATTTGTTCTTGATCCATT+TGG - chr8_1:61868198-61868217 None:intergenic 30.0%
!! ACTTGTTTTCTATCTTGGAA+GGG + chr8_1:61868311-61868330 Msa1205510:CDS 30.0%
!! AAGGAGTTTGTTTTCTATGT+AGG - chr8_1:61868543-61868562 None:intergenic 30.0%
ACAAAGCTAACACATTACTA+AGG - chr8_1:61868562-61868581 None:intergenic 30.0%
! CATTTTGTGATCCATTATTC+AGG - chr8_1:61868792-61868811 None:intergenic 30.0%
!! GAATAATGGATCACAAAATG+TGG + chr8_1:61868792-61868811 Msa1205510:CDS 30.0%
TATGGAAACATGGTTAAACT+CGG - chr8_1:61868827-61868846 None:intergenic 30.0%
AGAATCAAGAATCATATCAG+GGG - chr8_1:61868878-61868897 None:intergenic 30.0%
GAAGAATCAAGAATCATATC+AGG - chr8_1:61868880-61868899 None:intergenic 30.0%
GAGATTGAATGGCTATAATA+TGG + chr8_1:61868955-61868974 Msa1205510:intron 30.0%
! TCATGGACTATAATGGAAAT+TGG + chr8_1:61869202-61869221 Msa1205510:CDS 30.0%
! CATGGACTATAATGGAAATT+GGG + chr8_1:61869203-61869222 Msa1205510:CDS 30.0%
ACATTGCAATATAACATGGA+AGG + chr8_1:61867749-61867768 Msa1205510:CDS 30.0%
ATGTGAAATTGAAGATTACC+AGG - chr8_1:61867920-61867939 None:intergenic 30.0%
AACCATTCTAAATCTCGTTT+CGG - chr8_1:61868147-61868166 None:intergenic 30.0%
CTATTTGTTCTTGATCCATT+TGG - chr8_1:61868198-61868217 None:intergenic 30.0%
!! ACTTGTTTTCTATCTTGGAA+GGG + chr8_1:61868311-61868330 Msa1205510:CDS 30.0%
!! AAGGAGTTTGTTTTCTATGT+AGG - chr8_1:61868543-61868562 None:intergenic 30.0%
ACAAAGCTAACACATTACTA+AGG - chr8_1:61868562-61868581 None:intergenic 30.0%
! CATTTTGTGATCCATTATTC+AGG - chr8_1:61868792-61868811 None:intergenic 30.0%
!! GAATAATGGATCACAAAATG+TGG + chr8_1:61868792-61868811 Msa1205510:CDS 30.0%
TATGGAAACATGGTTAAACT+CGG - chr8_1:61868827-61868846 None:intergenic 30.0%
AGAATCAAGAATCATATCAG+GGG - chr8_1:61868878-61868897 None:intergenic 30.0%
GAAGAATCAAGAATCATATC+AGG - chr8_1:61868880-61868899 None:intergenic 30.0%
GAGATTGAATGGCTATAATA+TGG + chr8_1:61868955-61868974 Msa1205510:intron 30.0%
! TCATGGACTATAATGGAAAT+TGG + chr8_1:61869202-61869221 Msa1205510:CDS 30.0%
! CATGGACTATAATGGAAATT+GGG + chr8_1:61869203-61869222 Msa1205510:CDS 30.0%
TACCGAAACGAGATTTAGAA+TGG + chr8_1:61868142-61868161 Msa1205510:CDS 35.0%
! AATCTTTCTCTCTTTTCCAG+TGG - chr8_1:61868247-61868266 None:intergenic 35.0%
!! CACTTGTTTTCTATCTTGGA+AGG + chr8_1:61868310-61868329 Msa1205510:CDS 35.0%
CCTTAAAATATGGAGAGTCT+TGG - chr8_1:61868398-61868417 None:intergenic 35.0%
! CCAAGACTCTCCATATTTTA+AGG + chr8_1:61868395-61868414 Msa1205510:CDS 35.0%
! GTAGCGTCTTTGTATTTTCA+CGG + chr8_1:61868442-61868461 Msa1205510:intron 35.0%
AAAAGAATGAGAAGAGCAAG+AGG + chr8_1:61868692-61868711 Msa1205510:CDS 35.0%
AAAGAATGAGAAGAGCAAGA+GGG + chr8_1:61868693-61868712 Msa1205510:CDS 35.0%
!! GATTGGTTTCTATGGAAACA+TGG - chr8_1:61868837-61868856 None:intergenic 35.0%
!! GTTTGAAGGATTGGTTTCTA+TGG - chr8_1:61868845-61868864 None:intergenic 35.0%
AAACCAATCCTTCAAACTTC+TGG + chr8_1:61868848-61868867 Msa1205510:CDS 35.0%
TTCGGAAAGTTGAGATTGAA+TGG + chr8_1:61868944-61868963 Msa1205510:intron 35.0%
AAGTTCTCAAGGGAATTTCA+TGG + chr8_1:61869185-61869204 Msa1205510:CDS 35.0%
! GGGAATTTCATGGACTATAA+TGG + chr8_1:61869195-61869214 Msa1205510:CDS 35.0%
AAATTGGGATGTTCCTTATG+AGG + chr8_1:61869218-61869237 Msa1205510:CDS 35.0%
TACCGAAACGAGATTTAGAA+TGG + chr8_1:61868142-61868161 Msa1205510:CDS 35.0%
! AATCTTTCTCTCTTTTCCAG+TGG - chr8_1:61868247-61868266 None:intergenic 35.0%
!! CACTTGTTTTCTATCTTGGA+AGG + chr8_1:61868310-61868329 Msa1205510:CDS 35.0%
CCTTAAAATATGGAGAGTCT+TGG - chr8_1:61868398-61868417 None:intergenic 35.0%
! CCAAGACTCTCCATATTTTA+AGG + chr8_1:61868395-61868414 Msa1205510:CDS 35.0%
! GTAGCGTCTTTGTATTTTCA+CGG + chr8_1:61868442-61868461 Msa1205510:intron 35.0%
AAAAGAATGAGAAGAGCAAG+AGG + chr8_1:61868692-61868711 Msa1205510:CDS 35.0%
AAAGAATGAGAAGAGCAAGA+GGG + chr8_1:61868693-61868712 Msa1205510:CDS 35.0%
!! GATTGGTTTCTATGGAAACA+TGG - chr8_1:61868837-61868856 None:intergenic 35.0%
!! GTTTGAAGGATTGGTTTCTA+TGG - chr8_1:61868845-61868864 None:intergenic 35.0%
AAACCAATCCTTCAAACTTC+TGG + chr8_1:61868848-61868867 Msa1205510:CDS 35.0%
TTCGGAAAGTTGAGATTGAA+TGG + chr8_1:61868944-61868963 Msa1205510:intron 35.0%
AAGTTCTCAAGGGAATTTCA+TGG + chr8_1:61869185-61869204 Msa1205510:CDS 35.0%
! GGGAATTTCATGGACTATAA+TGG + chr8_1:61869195-61869214 Msa1205510:CDS 35.0%
AAATTGGGATGTTCCTTATG+AGG + chr8_1:61869218-61869237 Msa1205510:CDS 35.0%
! CTAGTTCTTCATCAGTTGGA+TGG - chr8_1:61867802-61867821 None:intergenic 40.0%
! CCAACTAGTTCTTCATCAGT+TGG - chr8_1:61867806-61867825 None:intergenic 40.0%
CCAACTGATGAAGAACTAGT+TGG + chr8_1:61867803-61867822 Msa1205510:CDS 40.0%
TTTGAGAAGCCTAATGCATG+AGG + chr8_1:61868095-61868114 Msa1205510:intron 40.0%
CATTTCACACCTCATGCATT+AGG - chr8_1:61868107-61868126 None:intergenic 40.0%
! CGAGATCTAAAGTACCCAAA+TGG + chr8_1:61868180-61868199 Msa1205510:CDS 40.0%
ACAAATAGAGCTACCAAAGC+TGG + chr8_1:61868210-61868229 Msa1205510:CDS 40.0%
AAGAGAGAAAGATTGTGTGC+CGG + chr8_1:61868253-61868272 Msa1205510:CDS 40.0%
!! TGATAGTGGATGAACTACAC+CGG - chr8_1:61868275-61868294 None:intergenic 40.0%
TGTAGTTCATCCACTATCAC+AGG + chr8_1:61868276-61868295 Msa1205510:CDS 40.0%
!! CAGTTAGTTCTATCGCCTAA+AGG - chr8_1:61868339-61868358 None:intergenic 40.0%
CTTTAGGCGATAGAACTAAC+TGG + chr8_1:61868337-61868356 Msa1205510:CDS 40.0%
! ACTGGATCATGCAAGAGTAT+CGG + chr8_1:61868355-61868374 Msa1205510:CDS 40.0%
AGAGTCTTGGCTAAGATCAT+CGG - chr8_1:61868385-61868404 None:intergenic 40.0%
TCAATTGCAAGGCTATGATC+TGG + chr8_1:61868486-61868505 Msa1205510:intron 40.0%
! GGAGCTTTTACTTTAACGTG+CGG + chr8_1:61868507-61868526 Msa1205510:intron 40.0%
! CTTTTACTTTAACGTGCGGT+GGG + chr8_1:61868511-61868530 Msa1205510:intron 40.0%
TGCATATATGTGGTTGCTGT+AGG + chr8_1:61868642-61868661 Msa1205510:intron 40.0%
GCATATATGTGGTTGCTGTA+GGG + chr8_1:61868643-61868662 Msa1205510:intron 40.0%
GTTGCAACAAGTTCCATCAA+TGG + chr8_1:61868715-61868734 Msa1205510:CDS 40.0%
GTCACTTGAGAATCTCATTG+AGG - chr8_1:61868749-61868768 None:intergenic 40.0%
CAAGCAAGTCACCTGAATAA+TGG + chr8_1:61868778-61868797 Msa1205510:CDS 40.0%
ACATGGTTAAACTCGGCAAT+TGG - chr8_1:61868820-61868839 None:intergenic 40.0%
GATCCAGAAGTTTGAAGGAT+TGG - chr8_1:61868854-61868873 None:intergenic 40.0%
CTTTAGTATACTCCTGCAGT+TGG - chr8_1:61869005-61869024 None:intergenic 40.0%
TGAATCACCAAGGCAATCAT+CGG + chr8_1:61869062-61869081 Msa1205510:CDS 40.0%
ATATGTTCCGATGATTGCCT+TGG - chr8_1:61869072-61869091 None:intergenic 40.0%
TCACCTTACTCAAGTTCTCA+AGG + chr8_1:61869174-61869193 Msa1205510:CDS 40.0%
CACCTTACTCAAGTTCTCAA+GGG + chr8_1:61869175-61869194 Msa1205510:CDS 40.0%
TTCCCTTGAGAACTTGAGTA+AGG - chr8_1:61869180-61869199 None:intergenic 40.0%
! CTAGTTCTTCATCAGTTGGA+TGG - chr8_1:61867802-61867821 None:intergenic 40.0%
! CCAACTAGTTCTTCATCAGT+TGG - chr8_1:61867806-61867825 None:intergenic 40.0%
CCAACTGATGAAGAACTAGT+TGG + chr8_1:61867803-61867822 Msa1205510:CDS 40.0%
TTTGAGAAGCCTAATGCATG+AGG + chr8_1:61868095-61868114 Msa1205510:intron 40.0%
CATTTCACACCTCATGCATT+AGG - chr8_1:61868107-61868126 None:intergenic 40.0%
! CGAGATCTAAAGTACCCAAA+TGG + chr8_1:61868180-61868199 Msa1205510:CDS 40.0%
ACAAATAGAGCTACCAAAGC+TGG + chr8_1:61868210-61868229 Msa1205510:CDS 40.0%
AAGAGAGAAAGATTGTGTGC+CGG + chr8_1:61868253-61868272 Msa1205510:CDS 40.0%
!! TGATAGTGGATGAACTACAC+CGG - chr8_1:61868275-61868294 None:intergenic 40.0%
TGTAGTTCATCCACTATCAC+AGG + chr8_1:61868276-61868295 Msa1205510:CDS 40.0%
!! CAGTTAGTTCTATCGCCTAA+AGG - chr8_1:61868339-61868358 None:intergenic 40.0%
CTTTAGGCGATAGAACTAAC+TGG + chr8_1:61868337-61868356 Msa1205510:CDS 40.0%
! ACTGGATCATGCAAGAGTAT+CGG + chr8_1:61868355-61868374 Msa1205510:CDS 40.0%
AGAGTCTTGGCTAAGATCAT+CGG - chr8_1:61868385-61868404 None:intergenic 40.0%
TCAATTGCAAGGCTATGATC+TGG + chr8_1:61868486-61868505 Msa1205510:intron 40.0%
! GGAGCTTTTACTTTAACGTG+CGG + chr8_1:61868507-61868526 Msa1205510:intron 40.0%
! CTTTTACTTTAACGTGCGGT+GGG + chr8_1:61868511-61868530 Msa1205510:intron 40.0%
TGCATATATGTGGTTGCTGT+AGG + chr8_1:61868642-61868661 Msa1205510:intron 40.0%
GCATATATGTGGTTGCTGTA+GGG + chr8_1:61868643-61868662 Msa1205510:intron 40.0%
GTTGCAACAAGTTCCATCAA+TGG + chr8_1:61868715-61868734 Msa1205510:CDS 40.0%
GTCACTTGAGAATCTCATTG+AGG - chr8_1:61868749-61868768 None:intergenic 40.0%
CAAGCAAGTCACCTGAATAA+TGG + chr8_1:61868778-61868797 Msa1205510:CDS 40.0%
ACATGGTTAAACTCGGCAAT+TGG - chr8_1:61868820-61868839 None:intergenic 40.0%
GATCCAGAAGTTTGAAGGAT+TGG - chr8_1:61868854-61868873 None:intergenic 40.0%
CTTTAGTATACTCCTGCAGT+TGG - chr8_1:61869005-61869024 None:intergenic 40.0%
TGAATCACCAAGGCAATCAT+CGG + chr8_1:61869062-61869081 Msa1205510:CDS 40.0%
ATATGTTCCGATGATTGCCT+TGG - chr8_1:61869072-61869091 None:intergenic 40.0%
TCACCTTACTCAAGTTCTCA+AGG + chr8_1:61869174-61869193 Msa1205510:CDS 40.0%
CACCTTACTCAAGTTCTCAA+GGG + chr8_1:61869175-61869194 Msa1205510:CDS 40.0%
TTCCCTTGAGAACTTGAGTA+AGG - chr8_1:61869180-61869199 None:intergenic 40.0%
GTTGGATGGAAACGAAAACC+TGG - chr8_1:61867788-61867807 None:intergenic 45.0%
TTTGCAGTTGCCTGTGATAG+TGG - chr8_1:61868289-61868308 None:intergenic 45.0%
TATCTTGGAAGGGCTCCTTT+AGG + chr8_1:61868321-61868340 Msa1205510:CDS 45.0%
TTGAACGCACGTCAATTGCA+AGG + chr8_1:61868475-61868494 Msa1205510:intron 45.0%
! GCTTTTACTTTAACGTGCGG+TGG + chr8_1:61868510-61868529 Msa1205510:intron 45.0%
TATATGTGGTTGCTGTAGGG+TGG + chr8_1:61868646-61868665 Msa1205510:intron 45.0%
TGAGGTCTCACTTCCATTGA+TGG - chr8_1:61868731-61868750 None:intergenic 45.0%
! ATTTTTGCTGCACCAACTGC+AGG + chr8_1:61868990-61869009 Msa1205510:intron 45.0%
GTTGGATGGAAACGAAAACC+TGG - chr8_1:61867788-61867807 None:intergenic 45.0%
TTTGCAGTTGCCTGTGATAG+TGG - chr8_1:61868289-61868308 None:intergenic 45.0%
TATCTTGGAAGGGCTCCTTT+AGG + chr8_1:61868321-61868340 Msa1205510:CDS 45.0%
TTGAACGCACGTCAATTGCA+AGG + chr8_1:61868475-61868494 Msa1205510:intron 45.0%
! GCTTTTACTTTAACGTGCGG+TGG + chr8_1:61868510-61868529 Msa1205510:intron 45.0%
TATATGTGGTTGCTGTAGGG+TGG + chr8_1:61868646-61868665 Msa1205510:intron 45.0%
TGAGGTCTCACTTCCATTGA+TGG - chr8_1:61868731-61868750 None:intergenic 45.0%
! ATTTTTGCTGCACCAACTGC+AGG + chr8_1:61868990-61869009 Msa1205510:intron 45.0%
GGATGGAAACGAAAACCTGG+TGG - chr8_1:61867785-61867804 None:intergenic 50.0%
TTTGATCCATGGGAGTTGCC+TGG + chr8_1:61867899-61867918 Msa1205510:CDS 50.0%
AGATTACCAGGCAACTCCCA+TGG - chr8_1:61867908-61867927 None:intergenic 50.0%
GGGGAGATCCAGAAGTTTGA+AGG - chr8_1:61868859-61868878 None:intergenic 50.0%
! CTTGGTGATTCACAGCTAGG+AGG - chr8_1:61869054-61869073 None:intergenic 50.0%
CTCCTAGCTGTGAATCACCA+AGG + chr8_1:61869052-61869071 Msa1205510:CDS 50.0%
! TGCCTTGGTGATTCACAGCT+AGG - chr8_1:61869057-61869076 None:intergenic 50.0%
GGATGGAAACGAAAACCTGG+TGG - chr8_1:61867785-61867804 None:intergenic 50.0%
TTTGATCCATGGGAGTTGCC+TGG + chr8_1:61867899-61867918 Msa1205510:CDS 50.0%
AGATTACCAGGCAACTCCCA+TGG - chr8_1:61867908-61867927 None:intergenic 50.0%
GGGGAGATCCAGAAGTTTGA+AGG - chr8_1:61868859-61868878 None:intergenic 50.0%
! CTTGGTGATTCACAGCTAGG+AGG - chr8_1:61869054-61869073 None:intergenic 50.0%
CTCCTAGCTGTGAATCACCA+AGG + chr8_1:61869052-61869071 Msa1205510:CDS 50.0%
! TGCCTTGGTGATTCACAGCT+AGG - chr8_1:61869057-61869076 None:intergenic 50.0%
!! GAAGGAGCATTACTGCCACC+AGG + chr8_1:61867767-61867786 Msa1205510:CDS 55.0%
GAGCTACCAAAGCTGGCTAC+TGG + chr8_1:61868217-61868236 Msa1205510:CDS 55.0%
GGCTTTCCAGTAGCCAGCTT+TGG - chr8_1:61868226-61868245 None:intergenic 55.0%
TGCACGCGCGTGCATATATG+TGG + chr8_1:61868632-61868651 Msa1205510:intron 55.0%
!! GAAGGAGCATTACTGCCACC+AGG + chr8_1:61867767-61867786 Msa1205510:CDS 55.0%
GAGCTACCAAAGCTGGCTAC+TGG + chr8_1:61868217-61868236 Msa1205510:CDS 55.0%
GGCTTTCCAGTAGCCAGCTT+TGG - chr8_1:61868226-61868245 None:intergenic 55.0%
TGCACGCGCGTGCATATATG+TGG + chr8_1:61868632-61868651 Msa1205510:intron 55.0%
GCTGGCTACTGGAAAGCCAC+TGG + chr8_1:61868228-61868247 Msa1205510:CDS 60.0%
GCTGGCTACTGGAAAGCCAC+TGG + chr8_1:61868228-61868247 Msa1205510:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 61867749 61869284 61867749 ID=Msa1205510;Name=Msa1205510
chr8_1 mRNA 61867749 61869284 61867749 ID=Msa1205510-mRNA-1;Parent=Msa1205510;Name=Msa1205510-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|1|0.5|1|1|1|4|0|323
chr8_1 exon 61867749 61867920 61867749 ID=Msa1205510-mRNA-1:exon:20037;Parent=Msa1205510-mRNA-1
chr8_1 exon 61868130 61868416 61868130 ID=Msa1205510-mRNA-1:exon:20038;Parent=Msa1205510-mRNA-1
chr8_1 exon 61868664 61868903 61868664 ID=Msa1205510-mRNA-1:exon:20039;Parent=Msa1205510-mRNA-1
chr8_1 exon 61869012 61869284 61869012 ID=Msa1205510-mRNA-1:exon:20040;Parent=Msa1205510-mRNA-1
chr8_1 CDS 61867749 61867920 61867749 ID=Msa1205510-mRNA-1:cds;Parent=Msa1205510-mRNA-1
chr8_1 CDS 61868130 61868416 61868130 ID=Msa1205510-mRNA-1:cds;Parent=Msa1205510-mRNA-1
chr8_1 CDS 61868664 61868903 61868664 ID=Msa1205510-mRNA-1:cds;Parent=Msa1205510-mRNA-1
chr8_1 CDS 61869012 61869284 61869012 ID=Msa1205510-mRNA-1:cds;Parent=Msa1205510-mRNA-1
Gene Sequence

>Msa1205510

ACATTGCAATATAACATGGAAGGAGCATTACTGCCACCAGGTTTTCGTTTCCATCCAACTGATGAAGAACTAGTTGGATACTATCTTAAAAGAAAAGTGGAAGGACTTGAAATTGAGCTTGATGTTATTCCAGTGATTGATTTTTACAAATTTGATCCATGGGAGTTGCCTGAGAAATCATTTCTACCGAAACGAGATTTAGAATGGTTTTTCTATTGTACGCGAGATCTAAAGTACCCAAATGGATCAAGAACAAATAGAGCTACCAAAGCTGGCTACTGGAAAGCCACTGGAAAAGAGAGAAAGATTGTGTGCCGGTGTAGTTCATCCACTATCACAGGCAACTGCAAAACACTTGTTTTCTATCTTGGAAGGGCTCCTTTAGGCGATAGAACTAACTGGATCATGCAAGAGTATCGGCTCACCGATGATCTTAGCCAAGACTCTCCATATTTTAAGGGTGGTTTAGCTTTGTGCCGAGTTATCAAAAAGAATGAGAAGAGCAAGAGGGTTGCAACAAGTTCCATCAATGGAAGTGAGACCTCAATGAGATTCTCAAGTGACGTTTCTTCTCAAGCAAGTCACCTGAATAATGGATCACAAAATGTGGCTCCAATTGCCGAGTTTAACCATGTTTCCATAGAAACCAATCCTTCAAACTTCTGGATCTCCCCTGATATGATTCTTGATTCTTCAAAGGAGTATACTAAAGTACAAGATGCAGTGTTTGAATATTTTCCTCCTAGCTGTGAATCACCAAGGCAATCATCGGAACATATAACAACTTCACCTACTTTATCCTACTCAAATTTTAATGCTGAAAATGAATTTTCAGATAATGTAAGTCAAAATGGATGCATGTCACCTTACTCAAGTTCTCAAGGGAATTTCATGGACTATAATGGAAATTGGGATGTTCCTTATGAGGTTTATAATCAAATTAATTCAGTCTCATATCCTGAGCCTTTCTAA
Protein sequence

>Msa1205510

TLQYNMEGALLPPGFRFHPTDEELVGYYLKRKVEGLEIELDVIPVIDFYKFDPWELPEKSFLPKRDLEWFFYCTRDLKYPNGSRTNRATKAGYWKATGKERKIVCRCSSSTITGNCKTLVFYLGRAPLGDRTNWIMQEYRLTDDLSQDSPYFKGGLALCRVIKKNEKSKRVATSSINGSETSMRFSSDVSSQASHLNNGSQNVAPIAEFNHVSIETNPSNFWISPDMILDSSKEYTKVQDAVFEYFPPSCESPRQSSEHITTSPTLSYSNFNAENEFSDNVSQNGCMSPYSSSQGNFMDYNGNWDVPYEVYNQINSVSYPEPF*