Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330660 | sp|Q9FGS4|NADA_ARATH | 72.998 | 637 | 165 | 4 | 54 | 687 | 80 | 712 | 0.0 | 983 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330660 | A0A072UQY1 | 96.193 | 683 | 26 | 0 | 7 | 689 | 4 | 686 | 0.0 | 1365 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021980 | Msa1330660 | 0.814608 | 1.413152e-51 | -8.615850e-47 |
| Msa0100250 | Msa1330660 | 0.806732 | 7.130065e-50 | -8.615850e-47 |
| Msa0605230 | Msa1330660 | 0.800400 | 1.467120e-48 | -8.615850e-47 |
| Msa0615850 | Msa1330660 | 0.806632 | 7.486688e-50 | -8.615850e-47 |
| Msa0639030 | Msa1330660 | 0.802079 | 6.651088e-49 | -8.615850e-47 |
| Msa0646390 | Msa1330660 | 0.808409 | 3.141676e-50 | -8.615850e-47 |
| Msa0664130 | Msa1330660 | 0.807925 | 3.982774e-50 | -8.615850e-47 |
| Msa0685880 | Msa1330660 | 0.808105 | 3.646314e-50 | -8.615850e-47 |
| Msa0697600 | Msa1330660 | 0.806199 | 9.236413e-50 | -8.615850e-47 |
| Msa0698900 | Msa1330660 | 0.810657 | 1.033667e-50 | -8.615850e-47 |
| Msa0701780 | Msa1330660 | 0.823248 | 1.534322e-53 | -8.615850e-47 |
| Msa0714380 | Msa1330660 | 0.801581 | 8.414863e-49 | -8.615850e-47 |
| Msa0796460 | Msa1330660 | 0.808875 | 2.498099e-50 | -8.615850e-47 |
| Msa0188500 | Msa1330660 | 0.805405 | 1.356257e-49 | -8.615850e-47 |
| Msa0200870 | Msa1330660 | 0.805501 | 1.294681e-49 | -8.615850e-47 |
| Msa1229710 | Msa1330660 | 0.804881 | 1.745812e-49 | -8.615850e-47 |
| Msa1238370 | Msa1330660 | 0.825173 | 5.416352e-54 | -8.615850e-47 |
| Msa1255520 | Msa1330660 | 0.816774 | 4.649329e-52 | -8.615850e-47 |
| Msa1259010 | Msa1330660 | 0.938766 | 3.904265e-99 | -8.615850e-47 |
| Msa1306700 | Msa1330660 | 0.802142 | 6.455710e-49 | -8.615850e-47 |
| Msa1314330 | Msa1330660 | 0.815287 | 9.988795e-52 | -8.615850e-47 |
| Msa1330660 | Msa1335720 | 0.800360 | 1.494715e-48 | -8.615850e-47 |
| Msa1330660 | Msa1353280 | 0.832235 | 1.061037e-55 | -8.615850e-47 |
| Msa1330660 | Msa1395640 | 0.822393 | 2.426972e-53 | -8.615850e-47 |
| Msa1330660 | Msa1419230 | 0.916468 | 1.718463e-85 | -8.615850e-47 |
| Msa1330660 | Msa1452940 | 0.804903 | 1.727918e-49 | -8.615850e-47 |
| Msa0368370 | Msa1330660 | 0.816617 | 5.042962e-52 | -8.615850e-47 |
| Msa0378670 | Msa1330660 | 0.810303 | 1.232561e-50 | -8.615850e-47 |
| Msa0378700 | Msa1330660 | 0.825341 | 4.941879e-54 | -8.615850e-47 |
| Msa0427050 | Msa1330660 | 0.806955 | 6.395751e-50 | -8.615850e-47 |
| Msa0448400 | Msa1330660 | 0.802406 | 5.695047e-49 | -8.615850e-47 |
| Msa0473450 | Msa1330660 | 0.802289 | 6.020321e-49 | -8.615850e-47 |
| Msa0480210 | Msa1330660 | 0.810477 | 1.130563e-50 | -8.615850e-47 |
| Msa1043870 | Msa1330660 | 0.823130 | 1.634523e-53 | -8.615850e-47 |
| Msa1044450 | Msa1330660 | 0.809277 | 2.049137e-50 | -8.615850e-47 |
| Msa1067710 | Msa1330660 | 0.821685 | 3.540707e-53 | -8.615850e-47 |
| Msa1070830 | Msa1330660 | 0.803137 | 4.024304e-49 | -8.615850e-47 |
| Msa1102180 | Msa1330660 | 0.836483 | 9.113660e-57 | -8.615850e-47 |
| Msa0243470 | Msa1330660 | 0.812671 | 3.770309e-51 | -8.615850e-47 |
| Msa0251150 | Msa1330660 | 0.800339 | 1.509347e-48 | -8.615850e-47 |
| Msa0282500 | Msa1330660 | 0.840670 | 7.561183e-58 | -8.615850e-47 |
| Msa0341190 | Msa1330660 | 0.813060 | 3.098461e-51 | -8.615850e-47 |
| Msa1125100 | Msa1330660 | 0.800910 | 1.154590e-48 | -8.615850e-47 |
| Msa1205510 | Msa1330660 | 0.806616 | 7.545722e-50 | -8.615850e-47 |
| Msa1208810 | Msa1330660 | 0.929686 | 4.867234e-93 | -8.615850e-47 |
| Msa1211020 | Msa1330660 | 0.806780 | 6.964680e-50 | -8.615850e-47 |
| Msa0502910 | Msa1330660 | 0.801795 | 7.606697e-49 | -8.615850e-47 |
| Msa0508140 | Msa1330660 | 0.804717 | 1.888847e-49 | -8.615850e-47 |
| Msa0516310 | Msa1330660 | 0.801303 | 9.595635e-49 | -8.615850e-47 |
| Msa0523360 | Msa1330660 | 0.804057 | 2.592492e-49 | -8.615850e-47 |
| Msa0534380 | Msa1330660 | 0.803987 | 2.681517e-49 | -8.615850e-47 |
| Msa0861560 | Msa1330660 | 0.811245 | 7.709171e-51 | -8.615850e-47 |
| Msa0871310 | Msa1330660 | 0.805315 | 1.416640e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330660 | MtrunA17_Chr4g0058291 | 96.193 | 683 | 26 | 0 | 7 | 689 | 58 | 740 | 0.0 | 1363 |
| Msa1330660 | MtrunA17_Chr3g0123541 | 58.209 | 134 | 55 | 1 | 61 | 193 | 61 | 194 | 1.89e-48 | 169 |
| Msa1330660 | MtrunA17_Chr1g0170001 | 37.857 | 140 | 84 | 3 | 59 | 197 | 76 | 213 | 2.49e-17 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330660 | AT5G50210.1 | 72.998 | 637 | 165 | 4 | 54 | 687 | 80 | 712 | 0.0 | 983 |
| Msa1330660 | AT1G67810.1 | 49.730 | 185 | 73 | 2 | 29 | 194 | 27 | 210 | 6.01e-53 | 183 |
| Msa1330660 | AT4G26500.1 | 36.029 | 136 | 82 | 2 | 59 | 192 | 84 | 216 | 1.31e-14 | 76.6 |
Find 188 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTACACTTATTATTATTT+TGG | 0.168939 | 8_4:+49897427 | Msa1330660:five_prime_UTR |
| ATGATCATCACTTCCCCTTT+TGG | 0.185849 | 8_4:+49897335 | Msa1330660:five_prime_UTR |
| TGAATGAAATAGCTGCATTT+TGG | 0.186738 | 8_4:+49902664 | Msa1330660:three_prime_UTR |
| AGGCTCCACCTCGAATATTT+TGG | 0.208556 | 8_4:+49901386 | Msa1330660:CDS |
| TTTGCACATGAGGAACTTTC+AGG | 0.232940 | 8_4:+49902262 | Msa1330660:CDS |
| GTTAAAATGCCTTGGACTTC+AGG | 0.242578 | 8_4:-49900069 | None:intergenic |
| CACCATTCTTCCACTGTCTT+AGG | 0.267925 | 8_4:-49902411 | None:intergenic |
| AGACAGGGTTCAAGAATCTT+TGG | 0.276598 | 8_4:+49901419 | Msa1330660:CDS |
| AAGTTCCTCATGTGCAAAAT+TGG | 0.290006 | 8_4:-49902257 | None:intergenic |
| ATTCTGTTCCTAAAACAAAT+TGG | 0.292543 | 8_4:-49901464 | None:intergenic |
| GGAGCAGGAAATGAAGGTTT+TGG | 0.306958 | 8_4:-49897662 | None:intergenic |
| TGGGCTGTACAGCGAGAGTA+TGG | 0.309210 | 8_4:+49897857 | Msa1330660:CDS |
| GGGGAGGGTTGTTCCATTCA+TGG | 0.314609 | 8_4:+49901681 | Msa1330660:CDS |
| CCTTGAGAAGAGGACTTTGC+AGG | 0.317076 | 8_4:-49901534 | None:intergenic |
| TACCAGGAACTGGTCGTTCT+AGG | 0.329579 | 8_4:+49898046 | Msa1330660:CDS |
| TGACTAGTGAATCAGATATA+TGG | 0.338796 | 8_4:-49900119 | None:intergenic |
| CTCACTTTCACAACCTCTTC+CGG | 0.342370 | 8_4:-49897991 | None:intergenic |
| TTAATCTCACCTTCCCTTCA+CGG | 0.345527 | 8_4:-49897897 | None:intergenic |
| GAAATTGACTCTGACGAAAC+TGG | 0.354905 | 8_4:-49901585 | None:intergenic |
| GGTTTGGGTGCTTGATGGGT+TGG | 0.356345 | 8_4:+49897966 | Msa1330660:CDS |
| AGCCGCTTCATTCGGTCTGC+TGG | 0.362125 | 8_4:-49897769 | None:intergenic |
| GTGCTGAAGGAGAAGAAAAT+TGG | 0.363638 | 8_4:+49900021 | Msa1330660:CDS |
| CATATATAACATTATTTCTC+TGG | 0.367421 | 8_4:-49902495 | None:intergenic |
| ATCTAAACAACCATCTTCTC+TGG | 0.369201 | 8_4:-49902468 | None:intergenic |
| GATTTGAATAGAGGCTGGTT+TGG | 0.370823 | 8_4:-49897631 | None:intergenic |
| GGCAGATTCAGCAGTCAAAA+TGG | 0.377543 | 8_4:+49900143 | Msa1330660:CDS |
| ATCTGATCAACCAGCTTCTC+AGG | 0.383048 | 8_4:-49902380 | None:intergenic |
| TGCAGCTACCTCTACTTATA+TGG | 0.385223 | 8_4:+49900518 | Msa1330660:CDS |
| GGTTGAAGAATGAAACGTTT+TGG | 0.385253 | 8_4:-49897610 | None:intergenic |
| TGTTTGGTTTGGGTGCTTGA+TGG | 0.386625 | 8_4:+49897961 | Msa1330660:CDS |
| TTTGGTTTAAGAACATGGTT+TGG | 0.397764 | 8_4:-49897592 | None:intergenic |
| TCCGCCACGGATTGACCATT+TGG | 0.409638 | 8_4:-49902221 | None:intergenic |
| TCTTTGATTGTTACTGATGA+TGG | 0.410818 | 8_4:+49898165 | Msa1330660:CDS |
| ACAAAACCTACCTTCATGTA+TGG | 0.422091 | 8_4:-49901720 | None:intergenic |
| AATAATAATAAGTGTAAGAG+TGG | 0.424429 | 8_4:-49897423 | None:intergenic |
| ACCCTAGAACGACCAGTTCC+TGG | 0.425445 | 8_4:-49898048 | None:intergenic |
| AATGTTGGTTTACCAGGAAC+TGG | 0.427576 | 8_4:+49898036 | Msa1330660:CDS |
| GATTTGAGAGATTTGAATAG+AGG | 0.428384 | 8_4:-49897640 | None:intergenic |
| GAAAGTGAGTACTGAGGATT+TGG | 0.429586 | 8_4:+49898005 | Msa1330660:CDS |
| ACCTATCGTTTGTTGCAACT+TGG | 0.430354 | 8_4:-49902554 | None:intergenic |
| TTGGTTTAAGAACATGGTTT+GGG | 0.435668 | 8_4:-49897591 | None:intergenic |
| GTAGGTGACGGCAAACTGTT+AGG | 0.438073 | 8_4:-49902142 | None:intergenic |
| GAATCAATGTTAGGCCCAAA+AGG | 0.445457 | 8_4:-49897350 | None:intergenic |
| GGTCTTAATGTTGGTTTACC+AGG | 0.445477 | 8_4:+49898030 | Msa1330660:CDS |
| GATGAAGTACAGGTTATTGT+TGG | 0.446010 | 8_4:-49900633 | None:intergenic |
| CCATACCATATGCTCAAATC+AGG | 0.448452 | 8_4:-49900831 | None:intergenic |
| AATGGTGTGATAAACTATTC+TGG | 0.454198 | 8_4:+49902427 | Msa1330660:three_prime_UTR |
| ATTCTTCATCCCAGAGAAGA+TGG | 0.459365 | 8_4:+49902458 | Msa1330660:three_prime_UTR |
| TGGAAAAGCTACGGTGGAGC+AGG | 0.460720 | 8_4:-49897677 | None:intergenic |
| GAGCAGCTGTTAAAATGCCT+TGG | 0.460865 | 8_4:-49900077 | None:intergenic |
| GTTTGGTTTGGGTGCTTGAT+GGG | 0.461263 | 8_4:+49897962 | Msa1330660:CDS |
| TGAGAGATTTGAATAGAGGC+TGG | 0.462920 | 8_4:-49897636 | None:intergenic |
| AGGAGTTTCAAAGGAGCGAC+AGG | 0.462977 | 8_4:-49897712 | None:intergenic |
| AGAAGCACAGCCACCATGAA+TGG | 0.464643 | 8_4:-49901694 | None:intergenic |
| AAGTGCCTGATTTGAGCATA+TGG | 0.464968 | 8_4:+49900826 | Msa1330660:CDS |
| AAAGGCATGGAATCAATGTT+AGG | 0.467124 | 8_4:-49897359 | None:intergenic |
| GGTGCTTGATGGGTTGGAAC+CGG | 0.473099 | 8_4:+49897972 | Msa1330660:CDS |
| CAAAGGAGCGACAGGGTTGG+TGG | 0.480530 | 8_4:-49897704 | None:intergenic |
| AACCAACCTGTAGAATAGTC+TGG | 0.480953 | 8_4:-49900665 | None:intergenic |
| GTAGCTACTCCTGGTACAAC+AGG | 0.481220 | 8_4:-49901657 | None:intergenic |
| TGATGATGGTGTTGTTCCTA+AGG | 0.482163 | 8_4:+49898179 | Msa1330660:CDS |
| AGTGTAGCAGCCGCTTCATT+CGG | 0.484630 | 8_4:-49897777 | None:intergenic |
| CACCTAAGACAGTGGAAGAA+TGG | 0.486747 | 8_4:+49902409 | Msa1330660:exon |
| TGGTTTGGGTTGATAGAGAG+TGG | 0.488000 | 8_4:-49897577 | None:intergenic |
| CGTTAAAACCAGCTTGATCA+AGG | 0.488925 | 8_4:-49900233 | None:intergenic |
| TCTCTCCAGGTACCTCAAGA+TGG | 0.493069 | 8_4:-49901317 | None:intergenic |
| TGAGCATATTGGATGTTCTC+TGG | 0.494907 | 8_4:+49900488 | Msa1330660:CDS |
| TTCAAGTTGCAGACTCCAAA+TGG | 0.497154 | 8_4:+49902206 | Msa1330660:CDS |
| GATAACATTTGATGAAGTAC+AGG | 0.497912 | 8_4:-49900643 | None:intergenic |
| TATCACAAAACATACTAGTT+CGG | 0.498050 | 8_4:+49902624 | Msa1330660:three_prime_UTR |
| TTCCCCAATGAGCTAAAAGT+TGG | 0.498614 | 8_4:+49899985 | Msa1330660:CDS |
| TTTCTTCGTCGGGTAGGTGA+CGG | 0.499826 | 8_4:-49902154 | None:intergenic |
| ACCAGGAACTGGTCGTTCTA+GGG | 0.500442 | 8_4:+49898047 | Msa1330660:CDS |
| TATAAAGTCCAAAATATTCG+AGG | 0.501825 | 8_4:-49901394 | None:intergenic |
| AGAATGTCGGATGAGCATAT+TGG | 0.504121 | 8_4:+49900477 | Msa1330660:CDS |
| GATTTGGTAGGTCTTAATGT+TGG | 0.504922 | 8_4:+49898021 | Msa1330660:CDS |
| GTAACAATCAAAGACGGAAA+AGG | 0.507347 | 8_4:-49898156 | None:intergenic |
| TGTTATCCAGACTATTCTAC+AGG | 0.508641 | 8_4:+49900659 | Msa1330660:CDS |
| GCAGTCAAAATGGCAAAAGC+TGG | 0.511039 | 8_4:+49900153 | Msa1330660:CDS |
| TGATGGGTTGGAACCGGAAG+AGG | 0.512717 | 8_4:+49897978 | Msa1330660:CDS |
| AATCAATGTTAGGCCCAAAA+GGG | 0.515369 | 8_4:-49897349 | None:intergenic |
| TGAAGGGAAGGTGAGATTAA+CGG | 0.517092 | 8_4:+49897900 | Msa1330660:CDS |
| GCCAATGAAAACATCTCTCC+AGG | 0.517924 | 8_4:-49901330 | None:intergenic |
| ATCATGCTTCCTGTTGTACC+AGG | 0.518289 | 8_4:+49901648 | Msa1330660:CDS |
| GAATCAGATATATGGATATG+AGG | 0.520531 | 8_4:-49900111 | None:intergenic |
| CGGTCATTACTGTCATCTGT+TGG | 0.522020 | 8_4:-49900893 | None:intergenic |
| CGCAGGGCTAACACCACCTA+TGG | 0.523956 | 8_4:+49897801 | Msa1330660:CDS |
| TTGTACCAGGAGTAGCTACC+GGG | 0.525696 | 8_4:+49901661 | Msa1330660:CDS |
| CTCTCCAGGTACCTCAAGAT+GGG | 0.525738 | 8_4:-49901316 | None:intergenic |
| ATGCAAATTCATAACAGTGC+TGG | 0.527687 | 8_4:+49900176 | Msa1330660:CDS |
| CCCTCCCCGGTAGCTACTCC+TGG | 0.528250 | 8_4:-49901666 | None:intergenic |
| TACGGTGGAGCAGGAAATGA+AGG | 0.530277 | 8_4:-49897668 | None:intergenic |
| GTATGGGCCTGATTCTTACA+TGG | 0.530520 | 8_4:+49900848 | Msa1330660:CDS |
| ATAAATTGTGTTATCATCAC+AGG | 0.536611 | 8_4:-49897468 | None:intergenic |
| GAGAAAACTTACCTCACAAA+GGG | 0.537725 | 8_4:-49897312 | None:intergenic |
| TGTTGACACGAACCGAGTCA+TGG | 0.538158 | 8_4:+49897837 | Msa1330660:CDS |
| ATTAACGGCGGATAGTGATT+CGG | 0.540324 | 8_4:+49897915 | Msa1330660:CDS |
| GCTTCAGCATAACTACCCTT+AGG | 0.540381 | 8_4:-49898195 | None:intergenic |
| CTGATTTGAGCATATGGTAT+GGG | 0.543849 | 8_4:+49900832 | Msa1330660:CDS |
| GTACCTCAAGATGGGCAGTA+AGG | 0.545529 | 8_4:-49901308 | None:intergenic |
| GGTTGCTGAGAGAGAAGGGA+AGG | 0.547309 | 8_4:+49898122 | Msa1330660:CDS |
| TATGGGCCTGATTCTTACAT+GGG | 0.548581 | 8_4:+49900849 | Msa1330660:CDS |
| CCTGCAAAGTCCTCTTCTCA+AGG | 0.549676 | 8_4:+49901534 | Msa1330660:CDS |
| TATATCTGATTCACTAGTCA+TGG | 0.550454 | 8_4:+49900122 | Msa1330660:CDS |
| GACAGTAATGACCGATGAAG+AGG | 0.550512 | 8_4:+49900902 | Msa1330660:CDS |
| ATTCATAACAGTGCTGGGTG+TGG | 0.552603 | 8_4:+49900182 | Msa1330660:CDS |
| GGTCAATCCGTGGCGGACGT+AGG | 0.555795 | 8_4:+49902227 | Msa1330660:CDS |
| ACTGCCCATCTTGAGGTACC+TGG | 0.558961 | 8_4:+49901312 | Msa1330660:CDS |
| GGTTATAGTAGTTGCAGCCA+TGG | 0.559904 | 8_4:-49897545 | None:intergenic |
| ACAGAGTCTACATTGTGCGC+AGG | 0.562187 | 8_4:-49900939 | None:intergenic |
| GTTGACACGAACCGAGTCAT+GGG | 0.562213 | 8_4:+49897838 | Msa1330660:CDS |
| ATTGAAATTCCTCCGCGAGA+CGG | 0.565190 | 8_4:-49897735 | None:intergenic |
| AATTGGTTGCTGAGAGAGAA+GGG | 0.566535 | 8_4:+49898118 | Msa1330660:CDS |
| TGCAAATTCATAACAGTGCT+GGG | 0.566616 | 8_4:+49900177 | Msa1330660:CDS |
| ACACGCGATGTCTCCTCCAT+AGG | 0.569627 | 8_4:-49897817 | None:intergenic |
| GGCAATGGAAGCAAAGAGAA+GGG | 0.571709 | 8_4:+49901350 | Msa1330660:CDS |
| ATGAATGGAACAACCCTCCC+CGG | 0.571761 | 8_4:-49901679 | None:intergenic |
| GATAGAGAGTGGAAACAGAG+AGG | 0.572449 | 8_4:-49897566 | None:intergenic |
| TATCGCAGCAACCTCTTCAT+CGG | 0.572717 | 8_4:-49900913 | None:intergenic |
| TCTAAACAACCATCTTCTCT+GGG | 0.574102 | 8_4:-49902467 | None:intergenic |
| CGCGATGTCTCCTCCATAGG+TGG | 0.574176 | 8_4:-49897814 | None:intergenic |
| ACTTCAACTGAATTTAGACT+CGG | 0.574550 | 8_4:-49901618 | None:intergenic |
| GGGTAGTTATGCTGAAGCCC+AGG | 0.575484 | 8_4:+49898200 | Msa1330660:CDS |
| GGAGCGAAAATAGAGAAAGA+AGG | 0.576606 | 8_4:-49897503 | None:intergenic |
| CTGCAAAGTCCTCTTCTCAA+GGG | 0.577901 | 8_4:+49901535 | Msa1330660:CDS |
| ATTCCTTACTGCCCATCTTG+AGG | 0.578346 | 8_4:+49901305 | Msa1330660:CDS |
| GTTGTACCAGGAGTAGCTAC+CGG | 0.579533 | 8_4:+49901660 | Msa1330660:CDS |
| GAAGATCGACCGTGAAGGGA+AGG | 0.579807 | 8_4:+49897888 | Msa1330660:CDS |
| TAACACTAAATTAGAGACAA+AGG | 0.583383 | 8_4:+49900590 | Msa1330660:CDS |
| AGGTGAAGATCGACCGTGAA+GGG | 0.584569 | 8_4:+49897884 | Msa1330660:CDS |
| TAACAGCTGCTCAGAAGCAG+TGG | 0.584641 | 8_4:+49900088 | Msa1330660:CDS |
| TTTGAAACTCCTCCGTCTCG+CGG | 0.584780 | 8_4:+49897723 | Msa1330660:CDS |
| AGCCAGCAGACCGAATGAAG+CGG | 0.585883 | 8_4:+49897767 | Msa1330660:CDS |
| CAATTGGTTGCTGAGAGAGA+AGG | 0.587629 | 8_4:+49898117 | Msa1330660:CDS |
| TGCTTCTTGTCCATACATGA+AGG | 0.588521 | 8_4:+49901710 | Msa1330660:CDS |
| AAAACCAGCTTGATCAAGGA+TGG | 0.589043 | 8_4:-49900229 | None:intergenic |
| ATAATAATAAGTGTAAGAGT+GGG | 0.589690 | 8_4:-49897422 | None:intergenic |
| CTTCAACTGAATTTAGACTC+GGG | 0.590743 | 8_4:-49901617 | None:intergenic |
| ATGGGCCTGATTCTTACATG+GGG | 0.593015 | 8_4:+49900850 | Msa1330660:CDS |
| TTCACATCCTACGTCCGCCA+CGG | 0.594227 | 8_4:-49902234 | None:intergenic |
| ATAATAAGTGTAAGAGTGGG+AGG | 0.594684 | 8_4:-49897419 | None:intergenic |
| ATTCTTCACACCTAAGACAG+TGG | 0.597564 | 8_4:+49902401 | Msa1330660:exon |
| AAGATACTCCATATAAGTAG+AGG | 0.599338 | 8_4:-49900526 | None:intergenic |
| AAAGAAGTAGACTTAGAAGC+TGG | 0.599596 | 8_4:-49900552 | None:intergenic |
| TGGCAATGGAAGCAAAGAGA+AGG | 0.600814 | 8_4:+49901349 | Msa1330660:CDS |
| CCTGATTTGAGCATATGGTA+TGG | 0.601263 | 8_4:+49900831 | Msa1330660:CDS |
| TGCAAAGTCCTCTTCTCAAG+GGG | 0.605394 | 8_4:+49901536 | Msa1330660:CDS |
| ACCTTAAAATAGTGAAGTCG+TGG | 0.606778 | 8_4:-49900975 | None:intergenic |
| GATGATGGTGTTGTTCCTAA+GGG | 0.610414 | 8_4:+49898180 | Msa1330660:CDS |
| GTGAGTACTGAGGATTTGGT+AGG | 0.611581 | 8_4:+49898009 | Msa1330660:CDS |
| AGTGATTCGGAGATAACGAA+AGG | 0.615615 | 8_4:+49897928 | Msa1330660:CDS |
| GCGAGACGGAGGAGTTTCAA+AGG | 0.617512 | 8_4:-49897721 | None:intergenic |
| TCCAAGTTGCAACAAACGAT+AGG | 0.617870 | 8_4:+49902553 | Msa1330660:three_prime_UTR |
| TCGCTGTACAGCCCATGACT+CGG | 0.618275 | 8_4:-49897849 | None:intergenic |
| AGTCTAAATTCAGTTGAAGT+CGG | 0.620202 | 8_4:+49901621 | Msa1330660:CDS |
| TGAACTAGTCAATGTGCTGA+AGG | 0.626645 | 8_4:+49900008 | Msa1330660:CDS |
| GACTCCAAATGGTCAATCCG+TGG | 0.626715 | 8_4:+49902217 | Msa1330660:CDS |
| TTTCAAAGGAGCGACAGGGT+TGG | 0.627010 | 8_4:-49897707 | None:intergenic |
| TGAGAAAACTTACCTCACAA+AGG | 0.627130 | 8_4:-49897313 | None:intergenic |
| TTCAACTGAATTTAGACTCG+GGG | 0.629858 | 8_4:-49901616 | None:intergenic |
| AAAGTCCAAAATATTCGAGG+TGG | 0.631656 | 8_4:-49901391 | None:intergenic |
| CTGTACAGCGAGAGTATGGG+TGG | 0.635356 | 8_4:+49897861 | Msa1330660:CDS |
| GAAACTCCTCCGTCTCGCGG+AGG | 0.635633 | 8_4:+49897726 | Msa1330660:CDS |
| GGGCTGTACAGCGAGAGTAT+GGG | 0.637385 | 8_4:+49897858 | Msa1330660:CDS |
| TACAGCGAGAGTATGGGTGG+AGG | 0.640194 | 8_4:+49897864 | Msa1330660:CDS |
| AGGGCTAACACCACCTATGG+AGG | 0.642582 | 8_4:+49897804 | Msa1330660:CDS |
| AGCGGCTGCTACACTACGCA+GGG | 0.644427 | 8_4:+49897785 | Msa1330660:CDS |
| ATCAATGTTAGGCCCAAAAG+GGG | 0.644932 | 8_4:-49897348 | None:intergenic |
| GGAGTTTCAAAGGAGCGACA+GGG | 0.646874 | 8_4:-49897711 | None:intergenic |
| CAATGGAAGCAAAGAGAAGG+GGG | 0.651997 | 8_4:+49901352 | Msa1330660:CDS |
| TCATCAGTAACAATCAAAGA+CGG | 0.655468 | 8_4:-49898162 | None:intergenic |
| GAGGTGAAGATCGACCGTGA+AGG | 0.655638 | 8_4:+49897883 | Msa1330660:CDS |
| GGTTGACGTGTATAGAATGT+CGG | 0.656142 | 8_4:+49900464 | Msa1330660:intron |
| GGTTGTGAAAGTGAGTACTG+AGG | 0.656975 | 8_4:+49897999 | Msa1330660:CDS |
| GCAATGGAAGCAAAGAGAAG+GGG | 0.657387 | 8_4:+49901351 | Msa1330660:CDS |
| ACGATAGGTAATAGTTACCA+TGG | 0.657589 | 8_4:+49902568 | Msa1330660:three_prime_UTR |
| TACATGGATCCTGAAGTCCA+AGG | 0.660452 | 8_4:+49900060 | Msa1330660:CDS |
| CATACAACAAAATCTGACCA+TGG | 0.661140 | 8_4:-49902585 | None:intergenic |
| TTTGGACTTTATAAAAGACA+GGG | 0.664157 | 8_4:+49901404 | Msa1330660:CDS |
| GTCGTTCTAGGGTGAATACG+TGG | 0.666480 | 8_4:+49898058 | Msa1330660:CDS |
| GATTACTGCAATTGTCGCAG+CGG | 0.667769 | 8_4:+49901494 | Msa1330660:CDS |
| GCTGGGTGTGGATTTCATGT+CGG | 0.668987 | 8_4:+49900194 | Msa1330660:CDS |
| TCCAAATGGTCAATCCGTGG+CGG | 0.714010 | 8_4:+49902220 | Msa1330660:CDS |
| GAGGGTTGTTCCATTCATGG+TGG | 0.715274 | 8_4:+49901684 | Msa1330660:CDS |
| ACCAGGAGTAGCTACCGGGG+AGG | 0.721609 | 8_4:+49901665 | Msa1330660:CDS |
| AGGGAAGGTGAGATTAACGG+CGG | 0.747863 | 8_4:+49897903 | Msa1330660:CDS |
| TGGGCCTGATTCTTACATGG+GGG | 0.757861 | 8_4:+49900851 | Msa1330660:CDS |
| TGTACCAGGAGTAGCTACCG+GGG | 0.783130 | 8_4:+49901662 | Msa1330660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAACATGATATTAAATAAT+TGG | + | chr8_4:49898518-49898537 | Msa1330660:intron | 10.0% |
| !! | ATATTAAATAATTGGATATT+GGG | + | chr8_4:49898526-49898545 | Msa1330660:intron | 10.0% |
| !! | AAAATATAAATACAGAAAAA+TGG | - | chr8_4:49899750-49899769 | None:intergenic | 10.0% |
| !!! | ATTTTTCTGTATTTATATTT+TGG | + | chr8_4:49899749-49899768 | Msa1330660:intron | 10.0% |
| !!! | TCTTACACTTATTATTATTT+TGG | + | chr8_4:49897427-49897446 | Msa1330660:five_prime_UTR | 15.0% |
| !! | TTTAAATTTATTATCGACAT+CGG | - | chr8_4:49898300-49898319 | None:intergenic | 15.0% |
| !! | GATATTAAATAATTGGATAT+TGG | + | chr8_4:49898525-49898544 | Msa1330660:intron | 15.0% |
| !! | AACTTGAAAAATGTATTTAT+AGG | + | chr8_4:49899477-49899496 | Msa1330660:intron | 15.0% |
| !! | GGAAAAAAAATATGAAAAAA+TGG | - | chr8_4:49901123-49901142 | None:intergenic | 15.0% |
| !! | AAAAACTTTATTGAATAGAA+TGG | - | chr8_4:49901156-49901175 | None:intergenic | 15.0% |
| !! | ATAATAATAAGTGTAAGAGT+GGG | - | chr8_4:49897425-49897444 | None:intergenic | 20.0% |
| !! | AATAATAATAAGTGTAAGAG+TGG | - | chr8_4:49897426-49897445 | None:intergenic | 20.0% |
| !! | CATTTATTTACAAGTTAAAC+CGG | + | chr8_4:49898441-49898460 | Msa1330660:intron | 20.0% |
| !! | TTCTATTACTGTTATCATTA+GGG | + | chr8_4:49898591-49898610 | Msa1330660:intron | 20.0% |
| !! | ATGTTTGTTTATATTGTTGT+TGG | + | chr8_4:49898662-49898681 | Msa1330660:intron | 20.0% |
| !!! | GTATTTTTAACAATACTTTC+CGG | + | chr8_4:49899057-49899076 | Msa1330660:intron | 20.0% |
| !! | TTGAAAAATGTATTTATAGG+TGG | + | chr8_4:49899480-49899499 | Msa1330660:intron | 20.0% |
| !!! | TCATACAAAATTGACTTATA+AGG | - | chr8_4:49899526-49899545 | None:intergenic | 20.0% |
| !!! | TCAAATTCTAAGATAGTTTA+AGG | + | chr8_4:49899562-49899581 | Msa1330660:intron | 20.0% |
| !! | TTATCATCCTTGATTAATAT+GGG | - | chr8_4:49899626-49899645 | None:intergenic | 20.0% |
| !! | TTTATCATCCTTGATTAATA+TGG | - | chr8_4:49899627-49899646 | None:intergenic | 20.0% |
| !! | ATTAGAAGTTTAATACTTTC+AGG | - | chr8_4:49899932-49899951 | None:intergenic | 20.0% |
| !! | GCTAAATTTATAATCAACTT+AGG | + | chr8_4:49901764-49901783 | Msa1330660:intron | 20.0% |
| !! | CATATAAGTGTTTAAACATA+AGG | - | chr8_4:49901979-49901998 | None:intergenic | 20.0% |
| !! | CTTATGTTTAAACACTTATA+TGG | + | chr8_4:49901977-49901996 | Msa1330660:intron | 20.0% |
| !! | TATAATTGTTTATCCAAACA+GGG | + | chr8_4:49902013-49902032 | Msa1330660:intron | 20.0% |
| !! | AAGGTTAATTAAAACTACAT+GGG | - | chr8_4:49902330-49902349 | None:intergenic | 20.0% |
| !! | AAAGGTTAATTAAAACTACA+TGG | - | chr8_4:49902331-49902350 | None:intergenic | 20.0% |
| !!! | TGTAGTTTTAATTAACCTTT+TGG | + | chr8_4:49902331-49902350 | Msa1330660:intron | 20.0% |
| !!! | CATATATAACATTATTTCTC+TGG | - | chr8_4:49902498-49902517 | None:intergenic | 20.0% |
| !!! | ATTTCAATTTTTTCAAAGTG+TGG | - | chr8_4:49902697-49902716 | None:intergenic | 20.0% |
| !!! | AAAAAGCACTTTTGCTAAAA+AGG | - | chr8_4:49897380-49897399 | None:intergenic | 25.0% |
| ! | ATAAATTGTGTTATCATCAC+AGG | - | chr8_4:49897471-49897490 | None:intergenic | 25.0% |
| ! | GCACATATATTTATCAGATT+AGG | - | chr8_4:49898394-49898413 | None:intergenic | 25.0% |
| ! | GATAAATATATGTGCTTCAT+TGG | + | chr8_4:49898399-49898418 | Msa1330660:intron | 25.0% |
| ! | GTTCTATTACTGTTATCATT+AGG | + | chr8_4:49898590-49898609 | Msa1330660:intron | 25.0% |
| !!! | TGAATTTTGAGTTTGATCTT+GGG | - | chr8_4:49898726-49898745 | None:intergenic | 25.0% |
| !!! | TTGAATTTTGAGTTTGATCT+TGG | - | chr8_4:49898727-49898746 | None:intergenic | 25.0% |
| ! | TTGTTATCTTAGGATATTAG+TGG | + | chr8_4:49898890-49898909 | Msa1330660:intron | 25.0% |
| ! | ATATAGAATCTCTCCAAAAA+AGG | + | chr8_4:49898945-49898964 | Msa1330660:intron | 25.0% |
| ! | TATAGAATCTCTCCAAAAAA+GGG | + | chr8_4:49898946-49898965 | Msa1330660:intron | 25.0% |
| !!! | GTCTTAATTTGTTAAAACAC+CGG | - | chr8_4:49899079-49899098 | None:intergenic | 25.0% |
| !!! | TTCTGTTTTTATCTTGATTG+TGG | + | chr8_4:49899130-49899149 | Msa1330660:intron | 25.0% |
| !! | ACTTTCCTATTCAATTTTGT+AGG | + | chr8_4:49899320-49899339 | Msa1330660:intron | 25.0% |
| !! | CTTTCCTATTCAATTTTGTA+GGG | + | chr8_4:49899321-49899340 | Msa1330660:intron | 25.0% |
| !! | TGTTATTTGAGTCTATCTAT+TGG | + | chr8_4:49899375-49899394 | Msa1330660:intron | 25.0% |
| ! | GTTATTTGAGTCTATCTATT+GGG | + | chr8_4:49899376-49899395 | Msa1330660:intron | 25.0% |
| ! | AAAAATGTATTTATAGGTGG+TGG | + | chr8_4:49899483-49899502 | Msa1330660:intron | 25.0% |
| ! | AATCAAGGATGATAAAGAAA+TGG | + | chr8_4:49899631-49899650 | Msa1330660:intron | 25.0% |
| ! | ATCAAGGATGATAAAGAAAT+GGG | + | chr8_4:49899632-49899651 | Msa1330660:intron | 25.0% |
| !!! | GAGGTTTTAAGTATTTCTTT+TGG | + | chr8_4:49899720-49899739 | Msa1330660:intron | 25.0% |
| ! | TTACTTCACATTATGATGAA+TGG | + | chr8_4:49899848-49899867 | Msa1330660:intron | 25.0% |
| !! | TGATACTTGTTAATCTTTAG+CGG | + | chr8_4:49900416-49900435 | Msa1330660:intron | 25.0% |
| ! | TAACACTAAATTAGAGACAA+AGG | + | chr8_4:49900590-49900609 | Msa1330660:CDS | 25.0% |
| !! | ATATTTATCTCCTTTTATGC+AGG | + | chr8_4:49900794-49900813 | Msa1330660:intron | 25.0% |
| !! | TTTCTTGTATTCACCATTTT+AGG | + | chr8_4:49901078-49901097 | Msa1330660:intron | 25.0% |
| ! | TATAAAGTCCAAAATATTCG+AGG | - | chr8_4:49901397-49901416 | None:intergenic | 25.0% |
| !! | TTTTGGACTTTATAAAAGAC+AGG | + | chr8_4:49901403-49901422 | Msa1330660:CDS | 25.0% |
| ! | TTTGGACTTTATAAAAGACA+GGG | + | chr8_4:49901404-49901423 | Msa1330660:CDS | 25.0% |
| ! | ATTCTGTTCCTAAAACAAAT+TGG | - | chr8_4:49901467-49901486 | None:intergenic | 25.0% |
| ! | AATATGCTGAAAACATTGTA+TGG | - | chr8_4:49901867-49901886 | None:intergenic | 25.0% |
| ! | CTATAATTGTTTATCCAAAC+AGG | + | chr8_4:49902012-49902031 | Msa1330660:intron | 25.0% |
| ! | AGGTTAATTAAAACTACATG+GGG | - | chr8_4:49902329-49902348 | None:intergenic | 25.0% |
| ! | TATCACAAAACATACTAGTT+CGG | + | chr8_4:49902624-49902643 | Msa1330660:three_prime_UTR | 25.0% |
| TTGGTTTAAGAACATGGTTT+GGG | - | chr8_4:49897594-49897613 | None:intergenic | 30.0% | |
| ! | TTTGGTTTAAGAACATGGTT+TGG | - | chr8_4:49897595-49897614 | None:intergenic | 30.0% |
| !!! | AACGTTTTGGTTTAAGAACA+TGG | - | chr8_4:49897600-49897619 | None:intergenic | 30.0% |
| GATTTGAGAGATTTGAATAG+AGG | - | chr8_4:49897643-49897662 | None:intergenic | 30.0% | |
| GCAAAAAAAGACGAAACAAT+TGG | + | chr8_4:49898101-49898120 | Msa1330660:CDS | 30.0% | |
| TCATCAGTAACAATCAAAGA+CGG | - | chr8_4:49898165-49898184 | None:intergenic | 30.0% | |
| TCTTTGATTGTTACTGATGA+TGG | + | chr8_4:49898165-49898184 | Msa1330660:CDS | 30.0% | |
| AATAAAGACAGTACTAACCT+GGG | - | chr8_4:49898220-49898239 | None:intergenic | 30.0% | |
| AAATAAAGACAGTACTAACC+TGG | - | chr8_4:49898221-49898240 | None:intergenic | 30.0% | |
| TTCAGCATACTTATATGTGT+CGG | + | chr8_4:49898333-49898352 | Msa1330660:intron | 30.0% | |
| CCATAATATGTATCCGATAT+CGG | + | chr8_4:49898362-49898381 | Msa1330660:intron | 30.0% | |
| TATTACTGTTATCATTAGGG+AGG | + | chr8_4:49898594-49898613 | Msa1330660:intron | 30.0% | |
| ATTACTGTTATCATTAGGGA+GGG | + | chr8_4:49898595-49898614 | Msa1330660:intron | 30.0% | |
| TAGTGATTAACACATACATC+AGG | + | chr8_4:49898687-49898706 | Msa1330660:intron | 30.0% | |
| AGTGATTAACACATACATCA+GGG | + | chr8_4:49898688-49898707 | Msa1330660:intron | 30.0% | |
| TTCAACTTAAAATGCACTCA+AGG | + | chr8_4:49898742-49898761 | Msa1330660:intron | 30.0% | |
| TCAACTTAAAATGCACTCAA+GGG | + | chr8_4:49898743-49898762 | Msa1330660:intron | 30.0% | |
| !! | ATGAGGACATTTGTTATCTT+AGG | + | chr8_4:49898880-49898899 | Msa1330660:intron | 30.0% |
| TTATCTTAGGATATTAGTGG+TGG | + | chr8_4:49898893-49898912 | Msa1330660:intron | 30.0% | |
| TATCTTAGGATATTAGTGGT+GGG | + | chr8_4:49898894-49898913 | Msa1330660:intron | 30.0% | |
| ATAAGCATCAAATTCTTGCA+AGG | - | chr8_4:49899001-49899020 | None:intergenic | 30.0% | |
| TCACTTATCTCTACTATAAC+AGG | - | chr8_4:49899107-49899126 | None:intergenic | 30.0% | |
| ATTGAAGTAAAAGGACCATT+AGG | - | chr8_4:49899191-49899210 | None:intergenic | 30.0% | |
| GCGCAAAATATTGAAGTAAA+AGG | - | chr8_4:49899200-49899219 | None:intergenic | 30.0% | |
| CAAAATTGAATAGGAAAGTG+AGG | - | chr8_4:49899319-49899338 | None:intergenic | 30.0% | |
| TCAACCCTACAAAATTGAAT+AGG | - | chr8_4:49899328-49899347 | None:intergenic | 30.0% | |
| ! | TTGTCTTTTGTGTGTAAGTA+TGG | - | chr8_4:49899599-49899618 | None:intergenic | 30.0% |
| CAATGATCCCATATTAATCA+AGG | + | chr8_4:49899616-49899635 | Msa1330660:intron | 30.0% | |
| AAAACCTCAATTCCTGTATA+GGG | - | chr8_4:49899708-49899727 | None:intergenic | 30.0% | |
| TAAAACCTCAATTCCTGTAT+AGG | - | chr8_4:49899709-49899728 | None:intergenic | 30.0% | |
| !!! | TTTTTGTCTAGCTTTCTTGT+AGG | + | chr8_4:49899951-49899970 | Msa1330660:intron | 30.0% |
| GAATCAGATATATGGATATG+AGG | - | chr8_4:49900114-49900133 | None:intergenic | 30.0% | |
| TGACTAGTGAATCAGATATA+TGG | - | chr8_4:49900122-49900141 | None:intergenic | 30.0% | |
| TATATCTGATTCACTAGTCA+TGG | + | chr8_4:49900122-49900141 | Msa1330660:CDS | 30.0% | |
| !! | TAATACTTTTTGCATAGCGA+TGG | - | chr8_4:49900303-49900322 | None:intergenic | 30.0% |
| !! | TCGCTATGCAAAAAGTATTA+TGG | + | chr8_4:49900303-49900322 | Msa1330660:intron | 30.0% |
| TACACTAGATTAGCAGAATT+TGG | + | chr8_4:49900387-49900406 | Msa1330660:intron | 30.0% | |
| TTTCTCTGATGATTATTTGC+AGG | + | chr8_4:49900443-49900462 | Msa1330660:intron | 30.0% | |
| AAGATACTCCATATAAGTAG+AGG | - | chr8_4:49900529-49900548 | None:intergenic | 30.0% | |
| GATAACATTTGATGAAGTAC+AGG | - | chr8_4:49900646-49900665 | None:intergenic | 30.0% | |
| !! | CAGTAAAACTAGCTTTATTG+TGG | - | chr8_4:49900756-49900775 | None:intergenic | 30.0% |
| !!! | GACTTCACTATTTTAAGGTA+AGG | + | chr8_4:49900979-49900998 | Msa1330660:intron | 30.0% |
| ! | TGCATTGTTCATCATCTTTT+TGG | + | chr8_4:49901240-49901259 | Msa1330660:CDS | 30.0% |
| !! | GATCATCTCCAATTTGTTTT+AGG | + | chr8_4:49901456-49901475 | Msa1330660:CDS | 30.0% |
| !!! | TTTGTTTTAGGAACAGAATC+TGG | + | chr8_4:49901468-49901487 | Msa1330660:CDS | 30.0% |
| !!! | TTGTTTTAGGAACAGAATCT+GGG | + | chr8_4:49901469-49901488 | Msa1330660:CDS | 30.0% |
| ACTTCAACTGAATTTAGACT+CGG | - | chr8_4:49901621-49901640 | None:intergenic | 30.0% | |
| AGTCTAAATTCAGTTGAAGT+CGG | + | chr8_4:49901621-49901640 | Msa1330660:CDS | 30.0% | |
| ATAATCAACTTAGGTCTGTT+TGG | + | chr8_4:49901773-49901792 | Msa1330660:intron | 30.0% | |
| CTCTATTACTGAGCAAATTA+AGG | - | chr8_4:49902039-49902058 | None:intergenic | 30.0% | |
| !! | TAATTTGCTCAGTAATAGAG+CGG | + | chr8_4:49902039-49902058 | Msa1330660:intron | 30.0% |
| GCTAAAAGAATTCATCTGAA+AGG | - | chr8_4:49902117-49902136 | None:intergenic | 30.0% | |
| AATGGTGTGATAAACTATTC+TGG | + | chr8_4:49902427-49902446 | Msa1330660:three_prime_UTR | 30.0% | |
| ! | TGAATGAAATAGCTGCATTT+TGG | + | chr8_4:49902664-49902683 | Msa1330660:three_prime_UTR | 30.0% |
| ! | GAATGAAATAGCTGCATTTT+GGG | + | chr8_4:49902665-49902684 | Msa1330660:three_prime_UTR | 30.0% |
| !! | AAAAAAAGGTACCCTTTGTG+AGG | + | chr8_4:49897301-49897320 | Msa1330660:five_prime_UTR | 35.0% |
| GAGAAAACTTACCTCACAAA+GGG | - | chr8_4:49897315-49897334 | None:intergenic | 35.0% | |
| TGAGAAAACTTACCTCACAA+AGG | - | chr8_4:49897316-49897335 | None:intergenic | 35.0% | |
| AATCAATGTTAGGCCCAAAA+GGG | - | chr8_4:49897352-49897371 | None:intergenic | 35.0% | |
| ! | AAAGGCATGGAATCAATGTT+AGG | - | chr8_4:49897362-49897381 | None:intergenic | 35.0% |
| ATAATAAGTGTAAGAGTGGG+AGG | - | chr8_4:49897422-49897441 | None:intergenic | 35.0% | |
| ! | GGTGCAAAAATGAGTTGAAA+TGG | - | chr8_4:49897527-49897546 | None:intergenic | 35.0% |
| !! | TTCAACTCATTTTTGCACCA+TGG | + | chr8_4:49897528-49897547 | Msa1330660:exon | 35.0% |
| ! | GGTTGAAGAATGAAACGTTT+TGG | - | chr8_4:49897613-49897632 | None:intergenic | 35.0% |
| !! | TTTTTGTGCGTGTTTGGTTT+GGG | + | chr8_4:49897951-49897970 | Msa1330660:CDS | 35.0% |
| ! | GATTTGGTAGGTCTTAATGT+TGG | + | chr8_4:49898021-49898040 | Msa1330660:CDS | 35.0% |
| GTAACAATCAAAGACGGAAA+AGG | - | chr8_4:49898159-49898178 | None:intergenic | 35.0% | |
| CCGATATCGGATACATATTA+TGG | - | chr8_4:49898365-49898384 | None:intergenic | 35.0% | |
| ! | TTTTGCCAATAGAGACTCTA+AGG | - | chr8_4:49898497-49898516 | None:intergenic | 35.0% |
| TCAACAAAACTGCAAACTCT+AGG | + | chr8_4:49898549-49898568 | Msa1330660:intron | 35.0% | |
| !! | AAACTGCAAACTCTAGGATT+CGG | + | chr8_4:49898555-49898574 | Msa1330660:intron | 35.0% |
| ATTCTTTAGCCTATGCTATG+AGG | + | chr8_4:49898863-49898882 | Msa1330660:intron | 35.0% | |
| AACAAATGTCCTCATAGCAT+AGG | - | chr8_4:49898875-49898894 | None:intergenic | 35.0% | |
| !!! | CCACTACTATTTCCCTTTTT+TGG | - | chr8_4:49898961-49898980 | None:intergenic | 35.0% |
| CCAAAAAAGGGAAATAGTAG+TGG | + | chr8_4:49898958-49898977 | Msa1330660:intron | 35.0% | |
| TATACTTGGCACATTCCTAA+TGG | + | chr8_4:49899173-49899192 | Msa1330660:intron | 35.0% | |
| ! | TTCCACTATATCTAAAGCGA+AGG | + | chr8_4:49899241-49899260 | Msa1330660:intron | 35.0% |
| ! | ATCTAAAGCGAAGGCATATT+TGG | + | chr8_4:49899250-49899269 | Msa1330660:intron | 35.0% |
| GATGAATGGATCATGATGAA+TGG | + | chr8_4:49899862-49899881 | Msa1330660:intron | 35.0% | |
| !!! | TCACCAACTTTTAGCTCATT+GGG | - | chr8_4:49899991-49900010 | None:intergenic | 35.0% |
| !!! | TTCACCAACTTTTAGCTCAT+TGG | - | chr8_4:49899992-49900011 | None:intergenic | 35.0% |
| ATGCAAATTCATAACAGTGC+TGG | + | chr8_4:49900176-49900195 | Msa1330660:CDS | 35.0% | |
| TGCAAATTCATAACAGTGCT+GGG | + | chr8_4:49900177-49900196 | Msa1330660:CDS | 35.0% | |
| AAAGAAGTAGACTTAGAAGC+TGG | - | chr8_4:49900555-49900574 | None:intergenic | 35.0% | |
| GATGAAGTACAGGTTATTGT+TGG | - | chr8_4:49900636-49900655 | None:intergenic | 35.0% | |
| TGTTATCCAGACTATTCTAC+AGG | + | chr8_4:49900659-49900678 | Msa1330660:CDS | 35.0% | |
| ! | CTTTTCTGTATTCCTCTTTG+TGG | + | chr8_4:49900697-49900716 | Msa1330660:intron | 35.0% |
| ! | CTGATTTGAGCATATGGTAT+GGG | + | chr8_4:49900832-49900851 | Msa1330660:CDS | 35.0% |
| ! | ACCACGACTTCACTATTTTA+AGG | + | chr8_4:49900974-49900993 | Msa1330660:CDS | 35.0% |
| ACCTTAAAATAGTGAAGTCG+TGG | - | chr8_4:49900978-49900997 | None:intergenic | 35.0% | |
| CAATCTGTGCTACATTTATG+TGG | + | chr8_4:49901054-49901073 | Msa1330660:intron | 35.0% | |
| !!! | ACCATTTTAGGATGCTAGTT+TGG | + | chr8_4:49901090-49901109 | Msa1330660:intron | 35.0% |
| ACCAAACTAGCATCCTAAAA+TGG | - | chr8_4:49901094-49901113 | None:intergenic | 35.0% | |
| GAATAGAATGGTCTTCATGT+AGG | - | chr8_4:49901144-49901163 | None:intergenic | 35.0% | |
| !! | TCTTTTTGGCAATGAAGTTG+TGG | + | chr8_4:49901254-49901273 | Msa1330660:CDS | 35.0% |
| ! | AGAGATGTTTTCATTGGCAA+TGG | + | chr8_4:49901335-49901354 | Msa1330660:CDS | 35.0% |
| AAAGTCCAAAATATTCGAGG+TGG | - | chr8_4:49901394-49901413 | None:intergenic | 35.0% | |
| TTCAACTGAATTTAGACTCG+GGG | - | chr8_4:49901619-49901638 | None:intergenic | 35.0% | |
| CTTCAACTGAATTTAGACTC+GGG | - | chr8_4:49901620-49901639 | None:intergenic | 35.0% | |
| ACAAAACCTACCTTCATGTA+TGG | - | chr8_4:49901723-49901742 | None:intergenic | 35.0% | |
| !! | TGAAGGTAGGTTTTGTCATT+CGG | + | chr8_4:49901727-49901746 | Msa1330660:intron | 35.0% |
| CTACTAGTAATTCACTTGTG+AGG | + | chr8_4:49901816-49901835 | Msa1330660:intron | 35.0% | |
| ! | ACTGATTTCATAAGCTATCC+AGG | - | chr8_4:49901902-49901921 | None:intergenic | 35.0% |
| ! | AGACAGCATATTTTCTTCGT+CGG | - | chr8_4:49902168-49902187 | None:intergenic | 35.0% |
| AAGTTCCTCATGTGCAAAAT+TGG | - | chr8_4:49902260-49902279 | None:intergenic | 35.0% | |
| !! | GAACTTTCAGGTTACTTTCT+TGG | + | chr8_4:49902274-49902293 | Msa1330660:intron | 35.0% |
| TCTAAACAACCATCTTCTCT+GGG | - | chr8_4:49902470-49902489 | None:intergenic | 35.0% | |
| ATCTAAACAACCATCTTCTC+TGG | - | chr8_4:49902471-49902490 | None:intergenic | 35.0% | |
| ACGATAGGTAATAGTTACCA+TGG | + | chr8_4:49902568-49902587 | Msa1330660:three_prime_UTR | 35.0% | |
| CATACAACAAAATCTGACCA+TGG | - | chr8_4:49902588-49902607 | None:intergenic | 35.0% | |
| !! | CATGGTCAGATTTTGTTGTA+TGG | + | chr8_4:49902586-49902605 | Msa1330660:three_prime_UTR | 35.0% |
| ! | ATGATCATCACTTCCCCTTT+TGG | + | chr8_4:49897335-49897354 | Msa1330660:five_prime_UTR | 40.0% |
| ! | TGATCATCACTTCCCCTTTT+GGG | + | chr8_4:49897336-49897355 | Msa1330660:five_prime_UTR | 40.0% |
| ATCAATGTTAGGCCCAAAAG+GGG | - | chr8_4:49897351-49897370 | None:intergenic | 40.0% | |
| GAATCAATGTTAGGCCCAAA+AGG | - | chr8_4:49897353-49897372 | None:intergenic | 40.0% | |
| ! | GCACTTTTGCTAAAAAGGCA+TGG | - | chr8_4:49897375-49897394 | None:intergenic | 40.0% |
| GGAGCGAAAATAGAGAAAGA+AGG | - | chr8_4:49897506-49897525 | None:intergenic | 40.0% | |
| ! | GATTTGAATAGAGGCTGGTT+TGG | - | chr8_4:49897634-49897653 | None:intergenic | 40.0% |
| TGAGAGATTTGAATAGAGGC+TGG | - | chr8_4:49897639-49897658 | None:intergenic | 40.0% | |
| !! | GGTGGTTTTTGGAAAAGCTA+CGG | - | chr8_4:49897689-49897708 | None:intergenic | 40.0% |
| TTAATCTCACCTTCCCTTCA+CGG | - | chr8_4:49897900-49897919 | None:intergenic | 40.0% | |
| TGAAGGGAAGGTGAGATTAA+CGG | + | chr8_4:49897900-49897919 | Msa1330660:CDS | 40.0% | |
| ATTAACGGCGGATAGTGATT+CGG | + | chr8_4:49897915-49897934 | Msa1330660:CDS | 40.0% | |
| ! | AGTGATTCGGAGATAACGAA+AGG | + | chr8_4:49897928-49897947 | Msa1330660:CDS | 40.0% |
| ! | GAAAGGTTTTTGTGCGTGTT+TGG | + | chr8_4:49897945-49897964 | Msa1330660:CDS | 40.0% |
| ! | GTTTTTGTGCGTGTTTGGTT+TGG | + | chr8_4:49897950-49897969 | Msa1330660:CDS | 40.0% |
| !! | GAAAGTGAGTACTGAGGATT+TGG | + | chr8_4:49898005-49898024 | Msa1330660:CDS | 40.0% |
| !! | GGTCTTAATGTTGGTTTACC+AGG | + | chr8_4:49898030-49898049 | Msa1330660:CDS | 40.0% |
| !! | AATGTTGGTTTACCAGGAAC+TGG | + | chr8_4:49898036-49898055 | Msa1330660:CDS | 40.0% |
| AATTGGTTGCTGAGAGAGAA+GGG | + | chr8_4:49898118-49898137 | Msa1330660:CDS | 40.0% | |
| !! | TGATGATGGTGTTGTTCCTA+AGG | + | chr8_4:49898179-49898198 | Msa1330660:CDS | 40.0% |
| !! | GATGATGGTGTTGTTCCTAA+GGG | + | chr8_4:49898180-49898199 | Msa1330660:CDS | 40.0% |
| TGTTGTGTGTCGTGTTTCAT+AGG | - | chr8_4:49898269-49898288 | None:intergenic | 40.0% | |
| GATTAGGCATGTTCCGATAT+CGG | - | chr8_4:49898378-49898397 | None:intergenic | 40.0% | |
| AAGGATTCTCCTAGTCGATT+AGG | - | chr8_4:49898468-49898487 | None:intergenic | 40.0% | |
| ! | ATCGACTAGGAGAATCCTTT+TGG | + | chr8_4:49898469-49898488 | Msa1330660:intron | 40.0% |
| !! | AGAGACTCTAAGGTACCAAA+AGG | - | chr8_4:49898487-49898506 | None:intergenic | 40.0% |
| TGGTACCTTAGAGTCTCTAT+TGG | + | chr8_4:49898489-49898508 | Msa1330660:intron | 40.0% | |
| !! | AACTCTAGGATTCGGAAGTT+TGG | + | chr8_4:49898563-49898582 | Msa1330660:intron | 40.0% |
| GTAGTCTTCAGTCTTCACAA+TGG | - | chr8_4:49898828-49898847 | None:intergenic | 40.0% | |
| !!! | GGATATTAGTGGTGGGTTTT+TGG | + | chr8_4:49898901-49898920 | Msa1330660:intron | 40.0% |
| CTTGCAAGGTGTAACAGAAA+GGG | - | chr8_4:49898987-49899006 | None:intergenic | 40.0% | |
| TCTTGCAAGGTGTAACAGAA+AGG | - | chr8_4:49898988-49899007 | None:intergenic | 40.0% | |
| TGTGGATGCTTACTTTGTAG+AGG | + | chr8_4:49899148-49899167 | Msa1330660:intron | 40.0% | |
| ! | ACTTTGTAGAGGCGTATACT+TGG | + | chr8_4:49899159-49899178 | Msa1330660:intron | 40.0% |
| ! | TGCCTTCGCTTTAGATATAG+TGG | - | chr8_4:49899246-49899265 | None:intergenic | 40.0% |
| ! | TAAAGCGAAGGCATATTTGG+CGG | + | chr8_4:49899253-49899272 | Msa1330660:intron | 40.0% |
| GACCAAACTCAAACTTCGTA+AGG | + | chr8_4:49899352-49899371 | Msa1330660:intron | 40.0% | |
| ! | CACCTTACGAAGTTTGAGTT+TGG | - | chr8_4:49899357-49899376 | None:intergenic | 40.0% |
| TCTATTGGGTCAACTGCTAT+CGG | + | chr8_4:49899390-49899409 | Msa1330660:intron | 40.0% | |
| GTAACACTAACACCCTATAC+AGG | + | chr8_4:49899693-49899712 | Msa1330660:intron | 40.0% | |
| AACACCCTATACAGGAATTG+AGG | + | chr8_4:49899701-49899720 | Msa1330660:intron | 40.0% | |
| GGATCATGATGAATGGATCA+TGG | + | chr8_4:49899869-49899888 | Msa1330660:intron | 40.0% | |
| !!! | TGCCTCAGTTTTGTTGAATC+TGG | + | chr8_4:49899905-49899924 | Msa1330660:intron | 40.0% |
| GTCCAGATTCAACAAAACTG+AGG | - | chr8_4:49899910-49899929 | None:intergenic | 40.0% | |
| TTCCCCAATGAGCTAAAAGT+TGG | + | chr8_4:49899985-49900004 | Msa1330660:CDS | 40.0% | |
| !!! | CACCAACTTTTAGCTCATTG+GGG | - | chr8_4:49899990-49900009 | None:intergenic | 40.0% |
| TGAACTAGTCAATGTGCTGA+AGG | + | chr8_4:49900008-49900027 | Msa1330660:CDS | 40.0% | |
| GTGCTGAAGGAGAAGAAAAT+TGG | + | chr8_4:49900021-49900040 | Msa1330660:CDS | 40.0% | |
| ! | CGTTGTTGCACACTTTTACA+TGG | + | chr8_4:49900044-49900063 | Msa1330660:CDS | 40.0% |
| GTTAAAATGCCTTGGACTTC+AGG | - | chr8_4:49900072-49900091 | None:intergenic | 40.0% | |
| AAAACCAGCTTGATCAAGGA+TGG | - | chr8_4:49900232-49900251 | None:intergenic | 40.0% | |
| CGTTAAAACCAGCTTGATCA+AGG | - | chr8_4:49900236-49900255 | None:intergenic | 40.0% | |
| !!! | TGATCAAGCTGGTTTTAACG+AGG | + | chr8_4:49900236-49900255 | Msa1330660:CDS | 40.0% |
| TTAGCATGTGTCTTCAAGAC+AGG | - | chr8_4:49900338-49900357 | None:intergenic | 40.0% | |
| GGTTGACGTGTATAGAATGT+CGG | + | chr8_4:49900464-49900483 | Msa1330660:intron | 40.0% | |
| AGAATGTCGGATGAGCATAT+TGG | + | chr8_4:49900477-49900496 | Msa1330660:CDS | 40.0% | |
| TGAGCATATTGGATGTTCTC+TGG | + | chr8_4:49900488-49900507 | Msa1330660:CDS | 40.0% | |
| TGCAGCTACCTCTACTTATA+TGG | + | chr8_4:49900518-49900537 | Msa1330660:CDS | 40.0% | |
| ATCCAGACTATTCTACAGGT+TGG | + | chr8_4:49900663-49900682 | Msa1330660:intron | 40.0% | |
| AACCAACCTGTAGAATAGTC+TGG | - | chr8_4:49900668-49900687 | None:intergenic | 40.0% | |
| TGAGCAAATGCCTGCATAAA+AGG | - | chr8_4:49900807-49900826 | None:intergenic | 40.0% | |
| ! | AAGTGCCTGATTTGAGCATA+TGG | + | chr8_4:49900826-49900845 | Msa1330660:CDS | 40.0% |
| CCATACCATATGCTCAAATC+AGG | - | chr8_4:49900834-49900853 | None:intergenic | 40.0% | |
| ! | CCTGATTTGAGCATATGGTA+TGG | + | chr8_4:49900831-49900850 | Msa1330660:CDS | 40.0% |
| TATGGGCCTGATTCTTACAT+GGG | + | chr8_4:49900849-49900868 | Msa1330660:CDS | 40.0% | |
| TGATCCATCCTGGCAAAAAA+AGG | - | chr8_4:49901220-49901239 | None:intergenic | 40.0% | |
| ! | ACCTGGAGAGATGTTTTCAT+TGG | + | chr8_4:49901329-49901348 | Msa1330660:CDS | 40.0% |
| AGACAGGGTTCAAGAATCTT+TGG | + | chr8_4:49901419-49901438 | Msa1330660:CDS | 40.0% | |
| ! | GAAATTGACTCTGACGAAAC+TGG | - | chr8_4:49901588-49901607 | None:intergenic | 40.0% |
| TGCTTCTTGTCCATACATGA+AGG | + | chr8_4:49901710-49901729 | Msa1330660:CDS | 40.0% | |
| TCTTGTCCATACATGAAGGT+AGG | + | chr8_4:49901714-49901733 | Msa1330660:intron | 40.0% | |
| !! | GTAGGTTTTGTCATTCGGTT+CGG | + | chr8_4:49901732-49901751 | Msa1330660:intron | 40.0% |
| GCAAGATCTTGATCTACTGT+TGG | + | chr8_4:49902061-49902080 | Msa1330660:intron | 40.0% | |
| ! | GACAGCATATTTTCTTCGTC+GGG | - | chr8_4:49902167-49902186 | None:intergenic | 40.0% |
| !! | TTCAAGTTGCAGACTCCAAA+TGG | + | chr8_4:49902206-49902225 | Msa1330660:CDS | 40.0% |
| ! | GTGAACCAATTTTGCACATG+AGG | + | chr8_4:49902252-49902271 | Msa1330660:CDS | 40.0% |
| TTTGCACATGAGGAACTTTC+AGG | + | chr8_4:49902262-49902281 | Msa1330660:CDS | 40.0% | |
| ! | TAACCTTTTGGTACTTGCAC+AGG | + | chr8_4:49902343-49902362 | Msa1330660:intron | 40.0% |
| TAAAAAGCTTCCTGAGAAGC+TGG | + | chr8_4:49902370-49902389 | Msa1330660:CDS | 40.0% | |
| ATTCTTCACACCTAAGACAG+TGG | + | chr8_4:49902401-49902420 | Msa1330660:exon | 40.0% | |
| ATTCTTCATCCCAGAGAAGA+TGG | + | chr8_4:49902458-49902477 | Msa1330660:three_prime_UTR | 40.0% | |
| TCCAAGTTGCAACAAACGAT+AGG | + | chr8_4:49902553-49902572 | Msa1330660:three_prime_UTR | 40.0% | |
| ! | ACCTATCGTTTGTTGCAACT+TGG | - | chr8_4:49902557-49902576 | None:intergenic | 40.0% |
| GGTTATAGTAGTTGCAGCCA+TGG | - | chr8_4:49897548-49897567 | None:intergenic | 45.0% | |
| GATAGAGAGTGGAAACAGAG+AGG | - | chr8_4:49897569-49897588 | None:intergenic | 45.0% | |
| !! | TGGTTTGGGTTGATAGAGAG+TGG | - | chr8_4:49897580-49897599 | None:intergenic | 45.0% |
| ! | GGAGCAGGAAATGAAGGTTT+TGG | - | chr8_4:49897665-49897684 | None:intergenic | 45.0% |
| !! | GGTTTTTGGAAAAGCTACGG+TGG | - | chr8_4:49897686-49897705 | None:intergenic | 45.0% |
| ATTGAAATTCCTCCGCGAGA+CGG | - | chr8_4:49897738-49897757 | None:intergenic | 45.0% | |
| !! | TGTTTGGTTTGGGTGCTTGA+TGG | + | chr8_4:49897961-49897980 | Msa1330660:CDS | 45.0% |
| !! | GTTTGGTTTGGGTGCTTGAT+GGG | + | chr8_4:49897962-49897981 | Msa1330660:CDS | 45.0% |
| CTCACTTTCACAACCTCTTC+CGG | - | chr8_4:49897994-49898013 | None:intergenic | 45.0% | |
| ! | GGTTGTGAAAGTGAGTACTG+AGG | + | chr8_4:49897999-49898018 | Msa1330660:CDS | 45.0% |
| !! | GTGAGTACTGAGGATTTGGT+AGG | + | chr8_4:49898009-49898028 | Msa1330660:CDS | 45.0% |
| CAATTGGTTGCTGAGAGAGA+AGG | + | chr8_4:49898117-49898136 | Msa1330660:CDS | 45.0% | |
| GCTTCAGCATAACTACCCTT+AGG | - | chr8_4:49898198-49898217 | None:intergenic | 45.0% | |
| TAAACCGGACCTAATCGACT+AGG | + | chr8_4:49898456-49898475 | Msa1330660:intron | 45.0% | |
| TTCTCCTAGTCGATTAGGTC+CGG | - | chr8_4:49898463-49898482 | None:intergenic | 45.0% | |
| TGCACTCAAGGGACAAATAC+AGG | + | chr8_4:49898754-49898773 | Msa1330660:intron | 45.0% | |
| ! | AAAGCGAAGGCATATTTGGC+GGG | + | chr8_4:49899254-49899273 | Msa1330660:intron | 45.0% |
| GAAGTCGCATATTGCATGAG+TGG | + | chr8_4:49899292-49899311 | Msa1330660:intron | 45.0% | |
| TACATGGATCCTGAAGTCCA+AGG | + | chr8_4:49900060-49900079 | Msa1330660:CDS | 45.0% | |
| GAGCAGCTGTTAAAATGCCT+TGG | - | chr8_4:49900080-49900099 | None:intergenic | 45.0% | |
| GGCAGATTCAGCAGTCAAAA+TGG | + | chr8_4:49900143-49900162 | Msa1330660:CDS | 45.0% | |
| GCAGTCAAAATGGCAAAAGC+TGG | + | chr8_4:49900153-49900172 | Msa1330660:CDS | 45.0% | |
| ! | ATTCATAACAGTGCTGGGTG+TGG | + | chr8_4:49900182-49900201 | Msa1330660:CDS | 45.0% |
| CAACGAACACAACCACAAAG+AGG | - | chr8_4:49900712-49900731 | None:intergenic | 45.0% | |
| GTATGGGCCTGATTCTTACA+TGG | + | chr8_4:49900848-49900867 | Msa1330660:CDS | 45.0% | |
| ATGGGCCTGATTCTTACATG+GGG | + | chr8_4:49900850-49900869 | Msa1330660:CDS | 45.0% | |
| TTTGCCCCCATGTAAGAATC+AGG | - | chr8_4:49900858-49900877 | None:intergenic | 45.0% | |
| CGGTCATTACTGTCATCTGT+TGG | - | chr8_4:49900896-49900915 | None:intergenic | 45.0% | |
| GACAGTAATGACCGATGAAG+AGG | + | chr8_4:49900902-49900921 | Msa1330660:CDS | 45.0% | |
| TATCGCAGCAACCTCTTCAT+CGG | - | chr8_4:49900916-49900935 | None:intergenic | 45.0% | |
| !!! | TGCTCTTGCCTTTTTTTGCC+AGG | + | chr8_4:49901209-49901228 | Msa1330660:intron | 45.0% |
| !!! | CTTGCCTTTTTTTGCCAGGA+TGG | + | chr8_4:49901213-49901232 | Msa1330660:intron | 45.0% |
| GAACAATGCATGATCCATCC+TGG | - | chr8_4:49901230-49901249 | None:intergenic | 45.0% | |
| ATTCCTTACTGCCCATCTTG+AGG | + | chr8_4:49901305-49901324 | Msa1330660:CDS | 45.0% | |
| GCCAATGAAAACATCTCTCC+AGG | - | chr8_4:49901333-49901352 | None:intergenic | 45.0% | |
| TGGCAATGGAAGCAAAGAGA+AGG | + | chr8_4:49901349-49901368 | Msa1330660:CDS | 45.0% | |
| GGCAATGGAAGCAAAGAGAA+GGG | + | chr8_4:49901350-49901369 | Msa1330660:CDS | 45.0% | |
| GCAATGGAAGCAAAGAGAAG+GGG | + | chr8_4:49901351-49901370 | Msa1330660:CDS | 45.0% | |
| CAATGGAAGCAAAGAGAAGG+GGG | + | chr8_4:49901352-49901371 | Msa1330660:CDS | 45.0% | |
| ! | AGGCTCCACCTCGAATATTT+TGG | + | chr8_4:49901386-49901405 | Msa1330660:CDS | 45.0% |
| GATTACTGCAATTGTCGCAG+CGG | + | chr8_4:49901494-49901513 | Msa1330660:CDS | 45.0% | |
| CTGCAAAGTCCTCTTCTCAA+GGG | + | chr8_4:49901535-49901554 | Msa1330660:CDS | 45.0% | |
| TGCAAAGTCCTCTTCTCAAG+GGG | + | chr8_4:49901536-49901555 | Msa1330660:CDS | 45.0% | |
| ! | AACTTTTGCCCCTTGAGAAG+AGG | - | chr8_4:49901547-49901566 | None:intergenic | 45.0% |
| ATCATGCTTCCTGTTGTACC+AGG | + | chr8_4:49901648-49901667 | Msa1330660:CDS | 45.0% | |
| CATATTTCCACAAGCTCTCC+TGG | + | chr8_4:49901881-49901900 | Msa1330660:intron | 45.0% | |
| GAGCAAATTAAGGCCCTGTT+TGG | - | chr8_4:49902029-49902048 | None:intergenic | 45.0% | |
| ! | GCATATTTTCTTCGTCGGGT+AGG | - | chr8_4:49902163-49902182 | None:intergenic | 45.0% |
| TAGCCTGTGCAAGTACCAAA+AGG | - | chr8_4:49902349-49902368 | None:intergenic | 45.0% | |
| ATCTGATCAACCAGCTTCTC+AGG | - | chr8_4:49902383-49902402 | None:intergenic | 45.0% | |
| CACCTAAGACAGTGGAAGAA+TGG | + | chr8_4:49902409-49902428 | Msa1330660:exon | 45.0% | |
| CACCATTCTTCCACTGTCTT+AGG | - | chr8_4:49902414-49902433 | None:intergenic | 45.0% | |
| !!! | ATTTATAAAAATATTTTTCA+TGG | + | chr8_4:49899782-49899801 | Msa1330660:intron | 5.0% |
| TACGGTGGAGCAGGAAATGA+AGG | - | chr8_4:49897671-49897690 | None:intergenic | 50.0% | |
| TTTCAAAGGAGCGACAGGGT+TGG | - | chr8_4:49897710-49897729 | None:intergenic | 50.0% | |
| GGAGTTTCAAAGGAGCGACA+GGG | - | chr8_4:49897714-49897733 | None:intergenic | 50.0% | |
| AGGAGTTTCAAAGGAGCGAC+AGG | - | chr8_4:49897715-49897734 | None:intergenic | 50.0% | |
| ! | TTTGAAACTCCTCCGTCTCG+CGG | + | chr8_4:49897723-49897742 | Msa1330660:CDS | 50.0% |
| AGTGTAGCAGCCGCTTCATT+CGG | - | chr8_4:49897780-49897799 | None:intergenic | 50.0% | |
| TGTTGACACGAACCGAGTCA+TGG | + | chr8_4:49897837-49897856 | Msa1330660:CDS | 50.0% | |
| GTTGACACGAACCGAGTCAT+GGG | + | chr8_4:49897838-49897857 | Msa1330660:CDS | 50.0% | |
| AGGTGAAGATCGACCGTGAA+GGG | + | chr8_4:49897884-49897903 | Msa1330660:CDS | 50.0% | |
| AGGGAAGGTGAGATTAACGG+CGG | + | chr8_4:49897903-49897922 | Msa1330660:CDS | 50.0% | |
| TACCAGGAACTGGTCGTTCT+AGG | + | chr8_4:49898046-49898065 | Msa1330660:CDS | 50.0% | |
| ACCAGGAACTGGTCGTTCTA+GGG | + | chr8_4:49898047-49898066 | Msa1330660:CDS | 50.0% | |
| !! | GTCGTTCTAGGGTGAATACG+TGG | + | chr8_4:49898058-49898077 | Msa1330660:CDS | 50.0% |
| CACATACATCAGGGAGAGTG+TGG | + | chr8_4:49898697-49898716 | Msa1330660:intron | 50.0% | |
| ! | ATACATCAGGGAGAGTGTGG+AGG | + | chr8_4:49898700-49898719 | Msa1330660:intron | 50.0% |
| !!! | AGTGGTGGGTTTTTGGTCAG+TGG | + | chr8_4:49898908-49898927 | Msa1330660:intron | 50.0% |
| CACACTCCTCACAAATTGCG+CGG | - | chr8_4:49899431-49899450 | None:intergenic | 50.0% | |
| TAACAGCTGCTCAGAAGCAG+TGG | + | chr8_4:49900088-49900107 | Msa1330660:CDS | 50.0% | |
| GCTGGGTGTGGATTTCATGT+CGG | + | chr8_4:49900194-49900213 | Msa1330660:CDS | 50.0% | |
| GGCTCTGCTTGGAAACTGAA+AGG | - | chr8_4:49900282-49900301 | None:intergenic | 50.0% | |
| TGGGCCTGATTCTTACATGG+GGG | + | chr8_4:49900851-49900870 | Msa1330660:CDS | 50.0% | |
| ACAGAGTCTACATTGTGCGC+AGG | - | chr8_4:49900942-49900961 | None:intergenic | 50.0% | |
| GTACCTCAAGATGGGCAGTA+AGG | - | chr8_4:49901311-49901330 | None:intergenic | 50.0% | |
| CTCTCCAGGTACCTCAAGAT+GGG | - | chr8_4:49901319-49901338 | None:intergenic | 50.0% | |
| TCTCTCCAGGTACCTCAAGA+TGG | - | chr8_4:49901320-49901339 | None:intergenic | 50.0% | |
| GAAGCAAAGAGAAGGGGGAT+GGG | + | chr8_4:49901357-49901376 | Msa1330660:CDS | 50.0% | |
| CCTTGAGAAGAGGACTTTGC+AGG | - | chr8_4:49901537-49901556 | None:intergenic | 50.0% | |
| CCTGCAAAGTCCTCTTCTCA+AGG | + | chr8_4:49901534-49901553 | Msa1330660:CDS | 50.0% | |
| GTAGCTACTCCTGGTACAAC+AGG | - | chr8_4:49901660-49901679 | None:intergenic | 50.0% | |
| GTTGTACCAGGAGTAGCTAC+CGG | + | chr8_4:49901660-49901679 | Msa1330660:CDS | 50.0% | |
| TTGTACCAGGAGTAGCTACC+GGG | + | chr8_4:49901661-49901680 | Msa1330660:CDS | 50.0% | |
| ATGAATGGAACAACCCTCCC+CGG | - | chr8_4:49901682-49901701 | None:intergenic | 50.0% | |
| GAGGGTTGTTCCATTCATGG+TGG | + | chr8_4:49901684-49901703 | Msa1330660:CDS | 50.0% | |
| ! | AGAAGCACAGCCACCATGAA+TGG | - | chr8_4:49901697-49901716 | None:intergenic | 50.0% |
| AAGCTATCCAGGAGAGCTTG+TGG | - | chr8_4:49901891-49901910 | None:intergenic | 50.0% | |
| ! | GTAGGTGACGGCAAACTGTT+AGG | - | chr8_4:49902145-49902164 | None:intergenic | 50.0% |
| TTTCTTCGTCGGGTAGGTGA+CGG | - | chr8_4:49902157-49902176 | None:intergenic | 50.0% | |
| GACTCCAAATGGTCAATCCG+TGG | + | chr8_4:49902217-49902236 | Msa1330660:CDS | 50.0% | |
| TCCAAATGGTCAATCCGTGG+CGG | + | chr8_4:49902220-49902239 | Msa1330660:CDS | 50.0% | |
| TGGAAAAGCTACGGTGGAGC+AGG | - | chr8_4:49897680-49897699 | None:intergenic | 55.0% | |
| !!! | GCGACAGGGTTGGTGGTTTT+TGG | - | chr8_4:49897700-49897719 | None:intergenic | 55.0% |
| GCGAGACGGAGGAGTTTCAA+AGG | - | chr8_4:49897724-49897743 | None:intergenic | 55.0% | |
| AGCCAGCAGACCGAATGAAG+CGG | + | chr8_4:49897767-49897786 | Msa1330660:CDS | 55.0% | |
| AGGGCTAACACCACCTATGG+AGG | + | chr8_4:49897804-49897823 | Msa1330660:CDS | 55.0% | |
| ACACGCGATGTCTCCTCCAT+AGG | - | chr8_4:49897820-49897839 | None:intergenic | 55.0% | |
| TCGCTGTACAGCCCATGACT+CGG | - | chr8_4:49897852-49897871 | None:intergenic | 55.0% | |
| TGGGCTGTACAGCGAGAGTA+TGG | + | chr8_4:49897857-49897876 | Msa1330660:CDS | 55.0% | |
| ! | GGGCTGTACAGCGAGAGTAT+GGG | + | chr8_4:49897858-49897877 | Msa1330660:CDS | 55.0% |
| ! | CTGTACAGCGAGAGTATGGG+TGG | + | chr8_4:49897861-49897880 | Msa1330660:CDS | 55.0% |
| ! | TACAGCGAGAGTATGGGTGG+AGG | + | chr8_4:49897864-49897883 | Msa1330660:CDS | 55.0% |
| GAGGTGAAGATCGACCGTGA+AGG | + | chr8_4:49897883-49897902 | Msa1330660:CDS | 55.0% | |
| GAAGATCGACCGTGAAGGGA+AGG | + | chr8_4:49897888-49897907 | Msa1330660:CDS | 55.0% | |
| ! | GGTTTGGGTGCTTGATGGGT+TGG | + | chr8_4:49897966-49897985 | Msa1330660:CDS | 55.0% |
| !! | GGTGCTTGATGGGTTGGAAC+CGG | + | chr8_4:49897972-49897991 | Msa1330660:CDS | 55.0% |
| !! | TGATGGGTTGGAACCGGAAG+AGG | + | chr8_4:49897978-49897997 | Msa1330660:CDS | 55.0% |
| ACCCTAGAACGACCAGTTCC+TGG | - | chr8_4:49898051-49898070 | None:intergenic | 55.0% | |
| GGTTGCTGAGAGAGAAGGGA+AGG | + | chr8_4:49898122-49898141 | Msa1330660:CDS | 55.0% | |
| GGGTAGTTATGCTGAAGCCC+AGG | + | chr8_4:49898200-49898219 | Msa1330660:CDS | 55.0% | |
| ! | ACTGCTATCGGTTACGCTCG+AGG | + | chr8_4:49899402-49899421 | Msa1330660:intron | 55.0% |
| AGGTGTCCGCGCAATTTGTG+AGG | + | chr8_4:49899422-49899441 | Msa1330660:intron | 55.0% | |
| ! | TGCATAGCGATGGCTCTGCT+TGG | - | chr8_4:49900293-49900312 | None:intergenic | 55.0% |
| ! | ACTGCCCATCTTGAGGTACC+TGG | + | chr8_4:49901312-49901331 | Msa1330660:CDS | 55.0% |
| GGAAGCAAAGAGAAGGGGGA+TGG | + | chr8_4:49901356-49901375 | Msa1330660:CDS | 55.0% | |
| AGAAGGGGGATGGGAGTAGT+AGG | + | chr8_4:49901366-49901385 | Msa1330660:CDS | 55.0% | |
| TGTACCAGGAGTAGCTACCG+GGG | + | chr8_4:49901662-49901681 | Msa1330660:CDS | 55.0% | |
| GGGGAGGGTTGTTCCATTCA+TGG | + | chr8_4:49901681-49901700 | Msa1330660:CDS | 55.0% | |
| ! | TCCGCCACGGATTGACCATT+TGG | - | chr8_4:49902224-49902243 | None:intergenic | 55.0% |
| TTCACATCCTACGTCCGCCA+CGG | - | chr8_4:49902237-49902256 | None:intergenic | 55.0% | |
| CAAAGGAGCGACAGGGTTGG+TGG | - | chr8_4:49897707-49897726 | None:intergenic | 60.0% | |
| GAAATTCCTCCGCGAGACGG+AGG | - | chr8_4:49897735-49897754 | None:intergenic | 60.0% | |
| AGCCGCTTCATTCGGTCTGC+TGG | - | chr8_4:49897772-49897791 | None:intergenic | 60.0% | |
| AAGCGGCTGCTACACTACGC+AGG | + | chr8_4:49897784-49897803 | Msa1330660:CDS | 60.0% | |
| AGCGGCTGCTACACTACGCA+GGG | + | chr8_4:49897785-49897804 | Msa1330660:CDS | 60.0% | |
| CGCAGGGCTAACACCACCTA+TGG | + | chr8_4:49897801-49897820 | Msa1330660:CDS | 60.0% | |
| CGCGATGTCTCCTCCATAGG+TGG | - | chr8_4:49897817-49897836 | None:intergenic | 60.0% | |
| CGCGCCATCCTTGATCAAGC+TGG | + | chr8_4:49900225-49900244 | Msa1330660:CDS | 60.0% | |
| GAAACTCCTCCGTCTCGCGG+AGG | + | chr8_4:49897726-49897745 | Msa1330660:CDS | 65.0% | |
| ACCAGGAGTAGCTACCGGGG+AGG | + | chr8_4:49901665-49901684 | Msa1330660:CDS | 65.0% | |
| CCAGGAGTAGCTACCGGGGA+GGG | + | chr8_4:49901666-49901685 | Msa1330660:CDS | 65.0% | |
| !! | GGTCAATCCGTGGCGGACGT+AGG | + | chr8_4:49902227-49902246 | Msa1330660:CDS | 65.0% |
| CCCTCCCCGGTAGCTACTCC+TGG | - | chr8_4:49901669-49901688 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 49897288 | 49902728 | 49897288 | ID=Msa1330660;Name=Msa1330660 |
| chr8_4 | mRNA | 49897288 | 49902728 | 49897288 | ID=Msa1330660-mRNA-1;Parent=Msa1330660;Name=Msa1330660-mRNA-1;_AED=0.06;_eAED=0.06;_QI=259|1|1|1|1|1|7|313|689 |
| chr8_4 | exon | 49897288 | 49898221 | 49897288 | ID=Msa1330660-mRNA-1:exon:14490;Parent=Msa1330660-mRNA-1 |
| chr8_4 | exon | 49899973 | 49900257 | 49899973 | ID=Msa1330660-mRNA-1:exon:14491;Parent=Msa1330660-mRNA-1 |
| chr8_4 | exon | 49900465 | 49900680 | 49900465 | ID=Msa1330660-mRNA-1:exon:14492;Parent=Msa1330660-mRNA-1 |
| chr8_4 | exon | 49900816 | 49900995 | 49900816 | ID=Msa1330660-mRNA-1:exon:14493;Parent=Msa1330660-mRNA-1 |
| chr8_4 | exon | 49901231 | 49901731 | 49901231 | ID=Msa1330660-mRNA-1:exon:14494;Parent=Msa1330660-mRNA-1 |
| chr8_4 | exon | 49902122 | 49902283 | 49902122 | ID=Msa1330660-mRNA-1:exon:14495;Parent=Msa1330660-mRNA-1 |
| chr8_4 | exon | 49902365 | 49902728 | 49902365 | ID=Msa1330660-mRNA-1:exon:14496;Parent=Msa1330660-mRNA-1 |
| chr8_4 | five_prime_UTR | 49897288 | 49897546 | 49897288 | ID=Msa1330660-mRNA-1:five_prime_utr;Parent=Msa1330660-mRNA-1 |
| chr8_4 | CDS | 49897547 | 49898221 | 49897547 | ID=Msa1330660-mRNA-1:cds;Parent=Msa1330660-mRNA-1 |
| chr8_4 | CDS | 49899973 | 49900257 | 49899973 | ID=Msa1330660-mRNA-1:cds;Parent=Msa1330660-mRNA-1 |
| chr8_4 | CDS | 49900465 | 49900680 | 49900465 | ID=Msa1330660-mRNA-1:cds;Parent=Msa1330660-mRNA-1 |
| chr8_4 | CDS | 49900816 | 49900995 | 49900816 | ID=Msa1330660-mRNA-1:cds;Parent=Msa1330660-mRNA-1 |
| chr8_4 | CDS | 49901231 | 49901731 | 49901231 | ID=Msa1330660-mRNA-1:cds;Parent=Msa1330660-mRNA-1 |
| chr8_4 | CDS | 49902122 | 49902283 | 49902122 | ID=Msa1330660-mRNA-1:cds;Parent=Msa1330660-mRNA-1 |
| chr8_4 | CDS | 49902365 | 49902415 | 49902365 | ID=Msa1330660-mRNA-1:cds;Parent=Msa1330660-mRNA-1 |
| chr8_4 | three_prime_UTR | 49902416 | 49902728 | 49902416 | ID=Msa1330660-mRNA-1:three_prime_utr;Parent=Msa1330660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
