Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0523360 | XP_013462273.1 | 95.226 | 817 | 27 | 4 | 1 | 807 | 1 | 815 | 0.0 | 1588 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0523360 | sp|Q41059|GLGB2_PEA | 87.654 | 810 | 82 | 6 | 15 | 807 | 8 | 816 | 0.0 | 1444 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0523360 | A0A072V4N9 | 95.226 | 817 | 27 | 4 | 1 | 807 | 1 | 815 | 0.0 | 1588 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0126290 | Msa0523360 | 0.801494 | 8.767212e-49 | -8.615850e-47 |
Msa0140760 | Msa0523360 | 0.907679 | 3.903177e-81 | -8.615850e-47 |
Msa0385920 | Msa0523360 | 0.909007 | 9.163510e-82 | -8.615850e-47 |
Msa0479740 | Msa0523360 | 0.977010 | 6.209964e-143 | -8.615850e-47 |
Msa0523360 | Msa0550330 | 0.850409 | 1.730673e-60 | -8.615850e-47 |
Msa0523360 | Msa0605750 | 0.850733 | 1.403089e-60 | -8.615850e-47 |
Msa0523360 | Msa0646780 | 0.851781 | 7.095668e-61 | -8.615850e-47 |
Msa0523360 | Msa0686360 | 0.864723 | 9.902166e-65 | -8.615850e-47 |
Msa0523360 | Msa0701780 | 0.828695 | 7.792669e-55 | -8.615850e-47 |
Msa0523360 | Msa1166170 | 0.813641 | 2.309886e-51 | -8.615850e-47 |
Msa0523360 | Msa1166270 | 0.810074 | 1.381097e-50 | -8.615850e-47 |
Msa0523360 | Msa1205510 | 0.814382 | 1.585005e-51 | -8.615850e-47 |
Msa0523360 | Msa1208810 | 0.832875 | 7.363879e-56 | -8.615850e-47 |
Msa0523360 | Msa1255520 | 0.803187 | 3.928863e-49 | -8.615850e-47 |
Msa0523360 | Msa1259010 | 0.829265 | 5.668761e-55 | -8.615850e-47 |
Msa0523360 | Msa1297710 | 0.818060 | 2.386522e-52 | -8.615850e-47 |
Msa0523360 | Msa1330660 | 0.804057 | 2.592492e-49 | -8.615850e-47 |
Msa0523360 | Msa1410180 | 0.808859 | 2.518360e-50 | -8.615850e-47 |
Msa0523360 | Msa1419230 | 0.806604 | 7.588201e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0523360 | MtrunA17_Chr3g0143901 | 95.226 | 817 | 27 | 4 | 1 | 807 | 1 | 815 | 0.0 | 1588 |
Msa0523360 | MtrunA17_Chr7g0265941 | 56.921 | 708 | 278 | 7 | 82 | 777 | 173 | 865 | 0.0 | 832 |
Msa0523360 | MtrunA17_Chr3g0099611 | 40.484 | 578 | 324 | 8 | 183 | 759 | 339 | 897 | 1.70e-149 | 461 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0523360 | AT2G36390.1 | 57.434 | 686 | 265 | 8 | 82 | 755 | 160 | 830 | 0.0 | 818 |
Msa0523360 | AT5G03650.1 | 54.424 | 746 | 296 | 12 | 37 | 759 | 75 | 799 | 0.0 | 818 |
Msa0523360 | AT3G20440.2 | 40.206 | 582 | 319 | 10 | 183 | 759 | 334 | 891 | 8.66e-148 | 457 |
Msa0523360 | AT3G20440.3 | 41.273 | 550 | 298 | 9 | 183 | 722 | 334 | 868 | 4.78e-145 | 449 |
Msa0523360 | AT3G20440.1 | 38.144 | 582 | 301 | 11 | 183 | 759 | 334 | 861 | 2.42e-131 | 413 |
Find 263 sgRNAs with CRISPR-Local
Find 483 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCTTAGGTTATTTGAAATT+TGG | 0.117300 | 3_4:+76702970 | Msa0523360:intron |
AGTGATCTTTGAATGGTTTA+AGG | 0.157463 | 3_4:-76702483 | None:intergenic |
TCAAACATAGTGATGGATTT+TGG | 0.176936 | 3_4:+76703289 | Msa0523360:CDS |
GGAACTCCTGGTATGCCTTC+TGG | 0.197267 | 3_4:-76707531 | None:intergenic |
TGAACATACAGGTATAAAAT+TGG | 0.211155 | 3_4:+76707087 | Msa0523360:intron |
AGAAAGCAACAGTGCCAATT+TGG | 0.212689 | 3_4:+76707993 | Msa0523360:CDS |
TGGCACTGTTGCTTTCTTCT+TGG | 0.223618 | 3_4:-76707987 | None:intergenic |
ATCATTGCTGAAGATGTTTC+TGG | 0.228300 | 3_4:+76704815 | Msa0523360:CDS |
CGATTATTGAAATTTGTTTC+AGG | 0.232263 | 3_4:-76707552 | None:intergenic |
GATAGTGATGCTCAGGAATT+TGG | 0.241372 | 3_4:+76707144 | Msa0523360:CDS |
CTCTTGGGCAGTCCATTGTT+GGG | 0.244035 | 3_4:+76705215 | Msa0523360:intron |
CTTGAATTGTGAGGTATAAC+TGG | 0.247832 | 3_4:-76703252 | None:intergenic |
TTTCGTCGAATTTGACAAAT+AGG | 0.248374 | 3_4:+76704969 | Msa0523360:CDS |
CGATTTGATTGACCAAAGTT+TGG | 0.248390 | 3_4:-76708404 | None:intergenic |
ACGTAGTCAATCCACTTATC+AGG | 0.249889 | 3_4:-76704908 | None:intergenic |
TGAAGAGAAGCACAAATTAT+TGG | 0.259302 | 3_4:+76703138 | Msa0523360:intron |
TTTATCTTCGGAAAATAAAA+AGG | 0.266924 | 3_4:-76708581 | None:intergenic |
AACCTCGCATAAACTCTTAT+AGG | 0.267724 | 3_4:+76704210 | Msa0523360:CDS |
ATAGAGGCTACCACAAATTA+TGG | 0.268797 | 3_4:+76704534 | Msa0523360:CDS |
AAGTAATCTAGAGTAAATTT+TGG | 0.270865 | 3_4:+76708245 | Msa0523360:three_prime_UTR |
TTGCATCTGGCAAAATATTA+TGG | 0.272115 | 3_4:-76704790 | None:intergenic |
ATCAGATATTTAAGATCTTC+GGG | 0.284356 | 3_4:-76704377 | None:intergenic |
ACCACCTTAAATTAGATAAA+AGG | 0.285126 | 3_4:-76704601 | None:intergenic |
CATTCCTATTATGCATCATT+TGG | 0.289018 | 3_4:+76704308 | Msa0523360:CDS |
TATGGAACTCAAATTATCTT+TGG | 0.289438 | 3_4:-76708606 | None:intergenic |
ATATCCAAATGATGCATAAT+AGG | 0.289848 | 3_4:-76704312 | None:intergenic |
ACAATTCAAGAGTGAAGTTT+AGG | 0.293498 | 3_4:+76703265 | Msa0523360:CDS |
GAAGAGAAGCACAAATTATT+GGG | 0.298035 | 3_4:+76703139 | Msa0523360:intron |
CTGGATGAGTTCAAATTTGA+TGG | 0.298691 | 3_4:+76704626 | Msa0523360:CDS |
TTTGATGGATTTCGATTTGA+TGG | 0.299141 | 3_4:+76704641 | Msa0523360:CDS |
TCCCACAATTAGGTCAGTTC+TGG | 0.299935 | 3_4:+76702364 | Msa0523360:intron |
CACCCTACGACGGTGTCTAC+TGG | 0.305560 | 3_4:+76703370 | Msa0523360:CDS |
GAACTCCTGGTATGCCTTCT+GGG | 0.307643 | 3_4:-76707530 | None:intergenic |
TTCATAAATCCGTGGAGCTT+TGG | 0.308293 | 3_4:-76704162 | None:intergenic |
CCTCATTGCCCATAAAATTA+AGG | 0.309448 | 3_4:-76705512 | None:intergenic |
GAGTCAAATCTCTATCTAAA+TGG | 0.309472 | 3_4:+76708351 | Msa0523360:three_prime_UTR |
CCGTTGCTTGCTTCTTCACA+TGG | 0.315294 | 3_4:+76701578 | Msa0523360:five_prime_UTR |
TCCCATGATCCCCACTAGTA+TGG | 0.315589 | 3_4:-76708533 | None:intergenic |
CCAGTTTCTGAGGCGGGAAT+TGG | 0.319787 | 3_4:+76704857 | Msa0523360:CDS |
TATCAGATATTTAAGATCTT+CGG | 0.324291 | 3_4:-76704378 | None:intergenic |
TCATAAATCCGTGGAGCTTT+GGG | 0.326833 | 3_4:-76704161 | None:intergenic |
GGAATCAACATGGCATTTAC+AGG | 0.328591 | 3_4:+76704692 | Msa0523360:CDS |
ATGAAGGAAGGTTCAGGTTC+AGG | 0.330556 | 3_4:-76701746 | None:intergenic |
GGACTCTTCTACACCCAAAT+TGG | 0.331698 | 3_4:-76708007 | None:intergenic |
GGAGAGGACCTTGAAGGAAT+TGG | 0.335296 | 3_4:-76707577 | None:intergenic |
CTTTGAAAACATAGGAATCT+TGG | 0.335923 | 3_4:+76702447 | Msa0523360:CDS |
AGCTTTGGGCTTCGGTGGAC+GGG | 0.338525 | 3_4:-76704147 | None:intergenic |
AATTTGCTTTCAAAGAATTT+CGG | 0.338876 | 3_4:-76708103 | None:intergenic |
ATCCGTGGAGCTTTGGGCTT+CGG | 0.338999 | 3_4:-76704155 | None:intergenic |
TCTCTTGGGCAGTCCATTGT+TGG | 0.345283 | 3_4:+76705214 | Msa0523360:intron |
TTTGGATAAACTGTTGGAAA+TGG | 0.347177 | 3_4:+76708263 | Msa0523360:three_prime_UTR |
CCAATTCCCGCCTCAGAAAC+TGG | 0.356448 | 3_4:-76704857 | None:intergenic |
GAGCTTTGGGCTTCGGTGGA+CGG | 0.362407 | 3_4:-76704148 | None:intergenic |
TCAAACACCTTGCATCCATT+TGG | 0.366934 | 3_4:-76702091 | None:intergenic |
GAGAGGTCTATTGGAGAGAT+TGG | 0.367543 | 3_4:+76708304 | Msa0523360:three_prime_UTR |
CTCCATCCATTGCCTTCTCT+TGG | 0.367812 | 3_4:-76706144 | None:intergenic |
CGACAAATAGAGAGGTCTAT+TGG | 0.369971 | 3_4:+76708295 | Msa0523360:three_prime_UTR |
GAAGATGTTTCTGGCATGCC+TGG | 0.374304 | 3_4:+76704824 | Msa0523360:CDS |
GTCGTAGGGTGCGGCAAATC+TGG | 0.384660 | 3_4:-76703358 | None:intergenic |
GATTTGATTGACCAAAGTTT+GGG | 0.391419 | 3_4:-76708403 | None:intergenic |
AGTAAGATTCTTGTGAACTT+TGG | 0.394257 | 3_4:-76704499 | None:intergenic |
GAAAGCAACAGTGCCAATTT+GGG | 0.396306 | 3_4:+76707994 | Msa0523360:CDS |
ACCTCGCATAAACTCTTATA+GGG | 0.407698 | 3_4:+76704211 | Msa0523360:CDS |
TTTGATGCTGGCCAACTGTC+TGG | 0.414017 | 3_4:+76704766 | Msa0523360:CDS |
TTGTTCTCTGTAGAAACATC+AGG | 0.415944 | 3_4:-76708063 | None:intergenic |
CACTTCTTAACCATGGCATT+AGG | 0.416044 | 3_4:+76705477 | Msa0523360:CDS |
TACTTTCACACTGGGGATAG+AGG | 0.416762 | 3_4:+76704518 | Msa0523360:CDS |
CTAGAGTACAAAGAAGGAAC+AGG | 0.417162 | 3_4:-76701639 | None:intergenic |
GTGATCTTTGAATGGTTTAA+GGG | 0.420952 | 3_4:-76702482 | None:intergenic |
ATCTAATTTAAGGTGGTGGC+TGG | 0.421670 | 3_4:+76704607 | Msa0523360:CDS |
TACCCTTCGTATGTATTCTC+TGG | 0.431849 | 3_4:-76706932 | None:intergenic |
TAATGCTCCATACGCCAAAC+TGG | 0.432457 | 3_4:-76703206 | None:intergenic |
TTAGGTCAGTTCTGGTTTCA+AGG | 0.433435 | 3_4:+76702372 | Msa0523360:intron |
TGCTGTTGTCTATTTGATGC+TGG | 0.436623 | 3_4:+76704754 | Msa0523360:CDS |
GCTTGGATGAAGGAAGGTTC+AGG | 0.437043 | 3_4:-76701752 | None:intergenic |
ACTGGGTTTCCATCAGCATC+AGG | 0.438554 | 3_4:-76703234 | None:intergenic |
GAGAGGACCTTGAAGGAATT+GGG | 0.440855 | 3_4:-76707576 | None:intergenic |
AACCTGCTTATCTCATTAGT+AGG | 0.446899 | 3_4:-76708205 | None:intergenic |
CGCACGCTACCTTGTATCTC+AGG | 0.447917 | 3_4:-76706212 | None:intergenic |
TCCATCCATTGCCTTCTCTT+GGG | 0.450169 | 3_4:-76706143 | None:intergenic |
AATTTGAAGTGATCTTTGAA+TGG | 0.451463 | 3_4:-76702490 | None:intergenic |
CTTGGCTATCATAATCCAAA+TGG | 0.453549 | 3_4:+76702076 | Msa0523360:CDS |
GTCTACTATCCCATAATTTG+TGG | 0.454392 | 3_4:-76704544 | None:intergenic |
GAACATACAGGTATAAAATT+GGG | 0.458728 | 3_4:+76707088 | Msa0523360:intron |
TTTGCTGTGAGTAGTAGATC+TGG | 0.463075 | 3_4:+76704350 | Msa0523360:CDS |
ATCCATACTAGTGGGGATCA+TGG | 0.467315 | 3_4:+76708531 | Msa0523360:three_prime_UTR |
CGTTGCTTGCTTCTTCACAT+GGG | 0.471151 | 3_4:+76701579 | Msa0523360:five_prime_UTR |
TGCACTGGATAGTGATGCTC+AGG | 0.471330 | 3_4:+76707137 | Msa0523360:CDS |
GTAAAGTGAAGTACTAGTAA+AGG | 0.471332 | 3_4:-76701611 | None:intergenic |
CAATAGACCTCTCTATTTGT+CGG | 0.472061 | 3_4:-76708294 | None:intergenic |
GCTCCATCACAGCCATCAGC+TGG | 0.472067 | 3_4:-76704286 | None:intergenic |
AATATTACTGATGGACTCAA+TGG | 0.472465 | 3_4:+76704464 | Msa0523360:CDS |
ACATCCCCAGAAGGCATACC+AGG | 0.475638 | 3_4:+76707525 | Msa0523360:CDS |
AAACATGCAAACCTAGGCTA+TGG | 0.476284 | 3_4:-76704409 | None:intergenic |
AGTCTTTGAACGTGGTGATC+TGG | 0.478627 | 3_4:+76706889 | Msa0523360:CDS |
AAATTTGTTTCAGGAACTCC+TGG | 0.479252 | 3_4:-76707543 | None:intergenic |
TAATCGACCCAATTCCTTCA+AGG | 0.480045 | 3_4:+76707569 | Msa0523360:CDS |
GAGGATTCAAACCCAAACTT+TGG | 0.480666 | 3_4:+76708392 | Msa0523360:three_prime_UTR |
GGCCGACCAGTTTCTGAGGC+GGG | 0.481889 | 3_4:+76704851 | Msa0523360:CDS |
TAGCCAAGTGCCACATGTAC+AGG | 0.483731 | 3_4:-76702061 | None:intergenic |
GAGATAACTTACTGAGCAGC+AGG | 0.488318 | 3_4:-76703036 | None:intergenic |
GCTTTGGGCTTCGGTGGACG+GGG | 0.488805 | 3_4:-76704146 | None:intergenic |
GCAATCCCTCGGTCAATAGT+AGG | 0.491136 | 3_4:-76705310 | None:intergenic |
GTTTCTGGCATGCCTGGACT+CGG | 0.497797 | 3_4:+76704830 | Msa0523360:CDS |
TATTACGTGGTGAGTGGTGG+AGG | 0.499253 | 3_4:-76701807 | None:intergenic |
TAATGGGACCTTTCTGAAAG+TGG | 0.504924 | 3_4:-76703399 | None:intergenic |
GAAACTGGTCGGCCGAGTCC+AGG | 0.505330 | 3_4:-76704842 | None:intergenic |
GACCTCTCTATTTGTCGGAA+AGG | 0.505934 | 3_4:-76708289 | None:intergenic |
CAAGAATCTTACTTTCACAC+TGG | 0.506433 | 3_4:+76704509 | Msa0523360:CDS |
TAGAGGCTACCACAAATTAT+GGG | 0.507122 | 3_4:+76704535 | Msa0523360:CDS |
TTTAGGTTCAAACATAGTGA+TGG | 0.510186 | 3_4:+76703282 | Msa0523360:CDS |
AAAATTGGGTGTGACTTGCC+TGG | 0.513053 | 3_4:+76707102 | Msa0523360:CDS |
CGTGGAGCTTTGGGCTTCGG+TGG | 0.513248 | 3_4:-76704152 | None:intergenic |
AGAACAAGAAAGACTATGAA+TGG | 0.517137 | 3_4:+76704933 | Msa0523360:CDS |
TCAGCAATGATAGTTGCATC+TGG | 0.517883 | 3_4:-76704803 | None:intergenic |
ATCAGTATCTGCTGCAGCAA+AGG | 0.518682 | 3_4:-76708028 | None:intergenic |
TCTTGGGCAGTCCATTGTTG+GGG | 0.519269 | 3_4:+76705216 | Msa0523360:intron |
GCTCAGGAATTTGGAGGACA+TGG | 0.519694 | 3_4:+76707153 | Msa0523360:CDS |
TAGGTCAGTTCTGGTTTCAA+GGG | 0.521375 | 3_4:+76702373 | Msa0523360:intron |
TCCATACTAGTGGGGATCAT+GGG | 0.521656 | 3_4:+76708532 | Msa0523360:three_prime_UTR |
AACCTACTAATGAGATAAGC+AGG | 0.521686 | 3_4:+76708203 | Msa0523360:three_prime_UTR |
TGGACTCAATGGCTTTGATG+TGG | 0.526196 | 3_4:+76704475 | Msa0523360:CDS |
ACCCTACGACGGTGTCTACT+GGG | 0.526553 | 3_4:+76703371 | Msa0523360:CDS |
GGGTTGATCGCATCCCCGCT+TGG | 0.528655 | 3_4:+76703310 | Msa0523360:CDS |
TCAATGTTGTATCATCATCA+TGG | 0.529165 | 3_4:+76704671 | Msa0523360:CDS |
CACAGGTACGAGGTGGGGAG+AGG | 0.532821 | 3_4:-76707593 | None:intergenic |
CCGAGGGATTGCTCTTCACA+AGG | 0.534323 | 3_4:+76705321 | Msa0523360:CDS |
GGTCTTGAGGAATTTGCAAA+AGG | 0.534854 | 3_4:+76702565 | Msa0523360:CDS |
TGAAGAACGGAATGGAATGG+AGG | 0.540638 | 3_4:-76701722 | None:intergenic |
AAATATTACGTGGTGAGTGG+TGG | 0.541193 | 3_4:-76701810 | None:intergenic |
TGACTTATCATCTGTCATAA+CGG | 0.541780 | 3_4:-76702401 | None:intergenic |
GTGGCATATTTAATCCAAGC+GGG | 0.543987 | 3_4:-76703324 | None:intergenic |
TGCCTTCTGGGGATGTGAAG+TGG | 0.544097 | 3_4:-76707518 | None:intergenic |
AAGAGGAAATCATCTGAGCT+TGG | 0.544151 | 3_4:-76701769 | None:intergenic |
GGCAATGTTGAAAGCGAAAG+AGG | 0.545850 | 3_4:-76701786 | None:intergenic |
CCATGGCTATCCCTGATAAG+TGG | 0.546456 | 3_4:+76704897 | Msa0523360:CDS |
GTAGACACCGTCGTAGGGTG+CGG | 0.547097 | 3_4:-76703367 | None:intergenic |
GATGGAGTTACGAGAAATGC+AGG | 0.547660 | 3_4:+76706160 | Msa0523360:CDS |
AGACTATGAATGGTCAATGA+AGG | 0.549129 | 3_4:+76704943 | Msa0523360:CDS |
TGGGAAATACAGAGTTGCAC+TGG | 0.549708 | 3_4:+76707122 | Msa0523360:CDS |
AATCATCTGAGCTTGGATGA+AGG | 0.550022 | 3_4:-76701762 | None:intergenic |
TGGATTGATTTCCCAAGAGA+AGG | 0.553145 | 3_4:+76706132 | Msa0523360:CDS |
GGGTGTACAATTGGAACAGA+TGG | 0.553934 | 3_4:+76701451 | Msa0523360:five_prime_UTR |
GGGTGTACAATTGGAACAGA+TGG | 0.553934 | 3_4:+76701544 | Msa0523360:five_prime_UTR |
TCTTAAATATCTGATAGATA+AGG | 0.556006 | 3_4:+76704385 | Msa0523360:CDS |
AAGCTCATTGAAGATTATGA+AGG | 0.556119 | 3_4:+76702541 | Msa0523360:CDS |
AAGCCTGTACATGTGGCACT+TGG | 0.556620 | 3_4:+76702058 | Msa0523360:CDS |
TCCCAGTAGACACCGTCGTA+GGG | 0.556929 | 3_4:-76703372 | None:intergenic |
CTGCGAGGAGAAGTAGAAGT+GGG | 0.557424 | 3_4:+76701522 | Msa0523360:five_prime_UTR |
TATTCAGAATCCATACTAGT+GGG | 0.558580 | 3_4:+76708523 | Msa0523360:three_prime_UTR |
GCTAGTAATAATATTACTGA+TGG | 0.558861 | 3_4:+76704455 | Msa0523360:CDS |
CTGTGAGAAGAAGTAGAAGT+GGG | 0.563916 | 3_4:+76701429 | None:intergenic |
CGTAGTCAATCCACTTATCA+GGG | 0.564048 | 3_4:-76704907 | None:intergenic |
ACGGCGTTGTGTACCGTGAG+TGG | 0.564952 | 3_4:+76703010 | Msa0523360:CDS |
AAGAATCTTACTTTCACACT+GGG | 0.566091 | 3_4:+76704510 | Msa0523360:CDS |
GAGCAGCAGGTGCCCACTCA+CGG | 0.566483 | 3_4:-76703023 | None:intergenic |
TTCTTAACCATGGCATTAGG+TGG | 0.568818 | 3_4:+76705480 | Msa0523360:CDS |
ATAGATAAGGCCCATAGCCT+AGG | 0.569541 | 3_4:+76704398 | Msa0523360:CDS |
AGATTATGAAGGAGGTCTTG+AGG | 0.570199 | 3_4:+76702552 | Msa0523360:CDS |
ACGAGAAATGCAGGCGTCAG+TGG | 0.570835 | 3_4:+76706169 | Msa0523360:CDS |
TCCCAAGAGAAGGCAATGGA+TGG | 0.571347 | 3_4:+76706142 | Msa0523360:CDS |
ACGGATTTATGAAGCTCATG+TGG | 0.572120 | 3_4:+76704172 | Msa0523360:CDS |
AAGATGCTGCTTATTTGTTG+AGG | 0.572790 | 3_4:-76702026 | None:intergenic |
GAAGAAGACTTTGAAAACAT+AGG | 0.574933 | 3_4:+76702439 | Msa0523360:CDS |
AACATGCAAACCTAGGCTAT+GGG | 0.576008 | 3_4:-76704408 | None:intergenic |
ATTAAGATCCCTGATGCTGA+TGG | 0.577589 | 3_4:+76703225 | Msa0523360:CDS |
GAAGAACGGAATGGAATGGA+GGG | 0.578645 | 3_4:-76701721 | None:intergenic |
TTGAATTGTGAGGTATAACT+GGG | 0.578742 | 3_4:-76703251 | None:intergenic |
CTCATTGAAGATTATGAAGG+AGG | 0.579941 | 3_4:+76702544 | Msa0523360:CDS |
AACCATGGCATTAGGTGGAG+AGG | 0.580599 | 3_4:+76705485 | Msa0523360:CDS |
AGTCCAGCTGATGGCTGTGA+TGG | 0.580857 | 3_4:+76704283 | Msa0523360:CDS |
GGTTGAAGAACGGAATGGAA+TGG | 0.581537 | 3_4:-76701725 | None:intergenic |
AGGTGGGGAGAGGACCTTGA+AGG | 0.582361 | 3_4:-76707583 | None:intergenic |
TTCAGGTTCAGGTTGAAGAA+CGG | 0.583621 | 3_4:-76701735 | None:intergenic |
TCAATGCTAGAGTACAAAGA+AGG | 0.583735 | 3_4:-76701645 | None:intergenic |
GAATCAACATGGCATTTACA+GGG | 0.583971 | 3_4:+76704693 | Msa0523360:CDS |
CCATCAAAACATGCAAACCT+AGG | 0.585432 | 3_4:-76704415 | None:intergenic |
CAGGCGTCAGTGGAATCTTG+TGG | 0.586763 | 3_4:+76706179 | Msa0523360:CDS |
TTTAGTTTGGCCATCCGGAG+TGG | 0.586788 | 3_4:+76706112 | Msa0523360:intron |
ACCATGGCATTAGGTGGAGA+GGG | 0.586812 | 3_4:+76705486 | Msa0523360:CDS |
AGTGCAACTCTGTATTTCCC+AGG | 0.587563 | 3_4:-76707120 | None:intergenic |
AGTGATGCTCAGGAATTTGG+AGG | 0.588177 | 3_4:+76707147 | Msa0523360:CDS |
TCATAATCCAAATGGATGCA+AGG | 0.588291 | 3_4:+76702084 | Msa0523360:CDS |
GCCCTCTCCACCTAATGCCA+TGG | 0.589435 | 3_4:-76705487 | None:intergenic |
TACCACACAGGTACGAGGTG+GGG | 0.589961 | 3_4:-76707598 | None:intergenic |
AATATTATGGACCAGACAGT+TGG | 0.590093 | 3_4:-76704777 | None:intergenic |
GACCTCTCTATCTACTCAAG+AGG | 0.590294 | 3_4:+76708373 | Msa0523360:three_prime_UTR |
GGGATCCACCACTTTCAGAA+AGG | 0.590680 | 3_4:+76703391 | Msa0523360:CDS |
GGATGGTTCCAACCATCACA+TGG | 0.590844 | 3_4:+76703176 | Msa0523360:CDS |
AACTCCTGGTATGCCTTCTG+GGG | 0.593273 | 3_4:-76707529 | None:intergenic |
GTGAGAAGAAGTAGAAGTGG+GGG | 0.593278 | 3_4:+76701431 | None:intergenic |
GATGATACACTTCTTAACCA+TGG | 0.594144 | 3_4:+76705470 | Msa0523360:intron |
GTTGCTTGCTTCTTCACATG+GGG | 0.594419 | 3_4:+76701580 | Msa0523360:five_prime_UTR |
CTATAATACAGTCCAGCTGA+TGG | 0.596190 | 3_4:+76704274 | Msa0523360:CDS |
TGATAAGTCAACAATGGCAT+CGG | 0.597287 | 3_4:+76702414 | Msa0523360:CDS |
AAGAGAAGCACAAATTATTG+GGG | 0.599266 | 3_4:+76703140 | Msa0523360:intron |
ACAAAGATCATACTTGGTCG+TGG | 0.600122 | 3_4:-76705027 | None:intergenic |
CAAGCAAAAGCCTGTACATG+TGG | 0.600160 | 3_4:+76702051 | Msa0523360:CDS |
ATCTGAGCTTGGATGAAGGA+AGG | 0.600410 | 3_4:-76701758 | None:intergenic |
GGGAAATATTACGTGGTGAG+TGG | 0.600455 | 3_4:-76701813 | None:intergenic |
AAATTGGGTGTGACTTGCCT+GGG | 0.601704 | 3_4:+76707103 | Msa0523360:CDS |
CACCGAAGCCCAAAGCTCCA+CGG | 0.603576 | 3_4:+76704153 | Msa0523360:CDS |
TCCAAAGGTATATTATAGAG+TGG | 0.603981 | 3_4:+76707957 | Msa0523360:intron |
ACTCGGCCGACCAGTTTCTG+AGG | 0.608346 | 3_4:+76704847 | Msa0523360:CDS |
CTGGGTTTCCATCAGCATCA+GGG | 0.610509 | 3_4:-76703233 | None:intergenic |
AACTTCACTCTTGAATTGTG+AGG | 0.611310 | 3_4:-76703261 | None:intergenic |
GATTTCCCAAGAGAAGGCAA+TGG | 0.616777 | 3_4:+76706138 | Msa0523360:CDS |
CAGATATTTAAGATCTTCGG+GGG | 0.617013 | 3_4:-76704375 | None:intergenic |
GGAAATCAATCCACTCCGGA+TGG | 0.617273 | 3_4:-76706122 | None:intergenic |
CGGCGTTGTGTACCGTGAGT+GGG | 0.617917 | 3_4:+76703011 | Msa0523360:CDS |
CAGCACTAACAATGAAGACA+AGG | 0.618234 | 3_4:+76706616 | Msa0523360:CDS |
CCTTGTGAAGAGCAATCCCT+CGG | 0.620184 | 3_4:-76705321 | None:intergenic |
CTTGGGAAATCAATCCACTC+CGG | 0.620373 | 3_4:-76706126 | None:intergenic |
TGGGACCTTTCTGAAAGTGG+TGG | 0.620766 | 3_4:-76703396 | None:intergenic |
TACAGATCACCTGAGATACA+AGG | 0.621689 | 3_4:+76706203 | Msa0523360:CDS |
AATAGTCTTGTCCCCAACAA+TGG | 0.621734 | 3_4:-76705227 | None:intergenic |
GTTCAGGTTGAAGAACGGAA+TGG | 0.621790 | 3_4:-76701730 | None:intergenic |
ATCAAAGAAGATGCAGACAA+CGG | 0.622136 | 3_4:+76708138 | Msa0523360:three_prime_UTR |
GGACTCAATGGCTTTGATGT+GGG | 0.622405 | 3_4:+76704476 | Msa0523360:CDS |
ATCCAGAGAATACATACGAA+GGG | 0.623560 | 3_4:+76706930 | Msa0523360:CDS |
TAGGGTGCGGCAAATCTGGT+AGG | 0.623566 | 3_4:-76703354 | None:intergenic |
CGGATTTATGAAGCTCATGT+GGG | 0.623839 | 3_4:+76704173 | Msa0523360:CDS |
TTTATTCATACATAACTTAG+GGG | 0.624327 | 3_4:-76708476 | None:intergenic |
GCTGTGAGAAGAAGTAGAAG+TGG | 0.625050 | 3_4:+76701428 | None:intergenic |
CGGCCGACCAGTTTCTGAGG+CGG | 0.625199 | 3_4:+76704850 | Msa0523360:CDS |
TTCCCGCCTCAGAAACTGGT+CGG | 0.626027 | 3_4:-76704853 | None:intergenic |
GAAACGAAGAACTTCCCAGT+TGG | 0.627819 | 3_4:-76704579 | None:intergenic |
GGATTTAACAGAGAAGAAGA+CGG | 0.627936 | 3_4:+76702991 | Msa0523360:CDS |
CTCCCCACCTCGTACCTGTG+TGG | 0.633791 | 3_4:+76707596 | Msa0523360:CDS |
ATACCACACAGGTACGAGGT+GGG | 0.634560 | 3_4:-76707599 | None:intergenic |
CTTCTCCTACTATTGACCGA+GGG | 0.640298 | 3_4:+76705305 | Msa0523360:CDS |
GACAGATGATAAGTCAACAA+TGG | 0.642453 | 3_4:+76702408 | Msa0523360:CDS |
ATATTCAGAATCCATACTAG+TGG | 0.643804 | 3_4:+76708522 | Msa0523360:three_prime_UTR |
TCCCTATAAGAGTTTATGCG+AGG | 0.645804 | 3_4:-76704212 | None:intergenic |
CTCCTTTCCGACAAATAGAG+AGG | 0.646341 | 3_4:+76708287 | Msa0523360:three_prime_UTR |
GACCACTTCACATCCCCAGA+AGG | 0.647751 | 3_4:+76707516 | Msa0523360:CDS |
CATCCAGAGAATACATACGA+AGG | 0.647997 | 3_4:+76706929 | Msa0523360:CDS |
CCATGTGAAGAAGCAAGCAA+CGG | 0.652771 | 3_4:-76701578 | None:intergenic |
TATTATTACTAGCATGACTG+TGG | 0.653570 | 3_4:-76704445 | None:intergenic |
TCAGATATTTAAGATCTTCG+GGG | 0.655792 | 3_4:-76704376 | None:intergenic |
CCACTTATCAGGGATAGCCA+TGG | 0.656646 | 3_4:-76704897 | None:intergenic |
TGCGAGGAGAAGTAGAAGTG+GGG | 0.657096 | 3_4:+76701523 | Msa0523360:five_prime_UTR |
GCTGCGAGGAGAAGTAGAAG+TGG | 0.661589 | 3_4:+76701521 | Msa0523360:five_prime_UTR |
ATCCTCTTGAGTAGATAGAG+AGG | 0.667069 | 3_4:-76708375 | None:intergenic |
ACATGAGCTTCATAAATCCG+TGG | 0.671060 | 3_4:-76704170 | None:intergenic |
GCGAGGAGAAGTAGAAGTGG+GGG | 0.674078 | 3_4:+76701524 | Msa0523360:five_prime_UTR |
GGATTCTGAATATACATGAG+TGG | 0.674661 | 3_4:-76708512 | None:intergenic |
AGATTTGCCGCACCCTACGA+CGG | 0.679295 | 3_4:+76703360 | Msa0523360:CDS |
ATCCCAGTAGACACCGTCGT+AGG | 0.679563 | 3_4:-76703373 | None:intergenic |
CATACCACACAGGTACGAGG+TGG | 0.680818 | 3_4:-76707600 | None:intergenic |
TAGAGTACAAAGAAGGAACA+GGG | 0.681673 | 3_4:-76701638 | None:intergenic |
ATTCAGAATCCATACTAGTG+GGG | 0.683075 | 3_4:+76708524 | Msa0523360:three_prime_UTR |
TGTGAGAAGAAGTAGAAGTG+GGG | 0.685950 | 3_4:+76701430 | None:intergenic |
TCATCATCATGGAATCAACA+TGG | 0.689050 | 3_4:+76704682 | Msa0523360:CDS |
GCTTCTCCTACTATTGACCG+AGG | 0.695039 | 3_4:+76705304 | Msa0523360:CDS |
AATCAACATGGCATTTACAG+GGG | 0.699309 | 3_4:+76704694 | Msa0523360:CDS |
TAGGTTATAGTCTTTGAACG+TGG | 0.699432 | 3_4:+76706881 | Msa0523360:intron |
TCACATACCACACAGGTACG+AGG | 0.699894 | 3_4:-76707603 | None:intergenic |
TGGCATATTTAATCCAAGCG+GGG | 0.705246 | 3_4:-76703323 | None:intergenic |
GATCAGATCACATACCACAC+AGG | 0.729306 | 3_4:-76707610 | None:intergenic |
AAATCTGGTAGGATCGACAG+TGG | 0.729665 | 3_4:-76703343 | None:intergenic |
AGAATCTTACTTTCACACTG+GGG | 0.746987 | 3_4:+76704511 | Msa0523360:CDS |
AGTGGCATATTTAATCCAAG+CGG | 0.761398 | 3_4:-76703325 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAAAATAAAAAATGGAA+CGG | + | chr3_4:76701499-76701518 | Msa0523360:five_prime_UTR | 10.0% |
!!! | AATTTCTTTTAGATTAAAAA+AGG | + | chr3_4:76701862-76701881 | Msa0523360:intron | 10.0% |
!!! | TTGAAAATTTATTTGTTTTT+AGG | + | chr3_4:76703567-76703586 | Msa0523360:intron | 10.0% |
!! | TTTAAATAACTATATTTGAT+TGG | - | chr3_4:76703793-76703812 | None:intergenic | 10.0% |
!! | AAAAATTGTTTATTCAAATT+AGG | + | chr3_4:76703811-76703830 | Msa0523360:intron | 10.0% |
!!! | AATAATATAGAATTTAGTTT+TGG | + | chr3_4:76705088-76705107 | Msa0523360:intron | 10.0% |
!! | TACAAAAATTTAAATGAAAA+GGG | - | chr3_4:76707635-76707654 | None:intergenic | 10.0% |
!! | ATACAAAAATTTAAATGAAA+AGG | - | chr3_4:76707636-76707655 | None:intergenic | 10.0% |
!!! | ATTTTATTTTAAACTTGCAA+CGG | - | chr3_4:76701488-76701507 | None:intergenic | 15.0% |
!! | ATTCTACATATGTAAATAAT+GGG | - | chr3_4:76703418-76703437 | None:intergenic | 15.0% |
!! | TATTCTACATATGTAAATAA+TGG | - | chr3_4:76703419-76703438 | None:intergenic | 15.0% |
!! | AATTACTTAGTTATAAAGTT+TGG | + | chr3_4:76703628-76703647 | Msa0523360:intron | 15.0% |
!!! | AATGTCATTTTTATTTAGTT+TGG | + | chr3_4:76706099-76706118 | Msa0523360:intron | 15.0% |
!! | ATCATAAATAATTAAACTTG+CGG | - | chr3_4:76706308-76706327 | None:intergenic | 15.0% |
!! | TAGTAAAAAAATGTTACATT+AGG | - | chr3_4:76706677-76706696 | None:intergenic | 15.0% |
!!! | AGATTTTTGAAGAATTAATT+TGG | + | chr3_4:76707274-76707293 | Msa0523360:intron | 15.0% |
!!! | TTTTATTCATACATAACTTA+GGG | - | chr3_4:76708480-76708499 | None:intergenic | 15.0% |
!!! | ATTTTATTCATACATAACTT+AGG | - | chr3_4:76708481-76708500 | None:intergenic | 15.0% |
!! | TACAACAAAGTAACAAAAAA+GGG | - | chr3_4:76701836-76701855 | None:intergenic | 20.0% |
!! | TTACAACAAAGTAACAAAAA+AGG | - | chr3_4:76701837-76701856 | None:intergenic | 20.0% |
!!! | AAGGTATATTTGTTAAGAAA+TGG | + | chr3_4:76702133-76702152 | Msa0523360:intron | 20.0% |
!!! | AGGTATATTTGTTAAGAAAT+GGG | + | chr3_4:76702134-76702153 | Msa0523360:intron | 20.0% |
!!! | ATCTTAGGTTATTTGAAATT+TGG | + | chr3_4:76702970-76702989 | Msa0523360:intron | 20.0% |
!!! | TATCAGATATTTAAGATCTT+CGG | - | chr3_4:76704381-76704400 | None:intergenic | 20.0% |
!! | TCTTAAATATCTGATAGATA+AGG | + | chr3_4:76704385-76704404 | Msa0523360:CDS | 20.0% |
!!! | GTTTCCTTTTATCTAATTTA+AGG | + | chr3_4:76704597-76704616 | Msa0523360:CDS | 20.0% |
!! | TCATTAAGAAGATAAATATC+AGG | - | chr3_4:76705599-76705618 | None:intergenic | 20.0% |
!! | ATAAGGAACTAAACAAAATA+AGG | - | chr3_4:76706417-76706436 | None:intergenic | 20.0% |
!!! | GCTTATGTTTTTTCTTTTAT+AGG | + | chr3_4:76706862-76706881 | Msa0523360:intron | 20.0% |
!! | GTAATCAAATATAACTTTGA+AGG | - | chr3_4:76707239-76707258 | None:intergenic | 20.0% |
!!! | ATATGATTTAATTTGCATGT+TGG | - | chr3_4:76707354-76707373 | None:intergenic | 20.0% |
!!! | AACATAGAATTTTAGAACAT+TGG | + | chr3_4:76707716-76707735 | Msa0523360:intron | 20.0% |
!!! | AAAATTTCATTTTCACTTCA+TGG | + | chr3_4:76707901-76707920 | Msa0523360:intron | 20.0% |
!! | TTGAATTTGAAAATTTCCAA+AGG | + | chr3_4:76707942-76707961 | Msa0523360:intron | 20.0% |
!!! | AATTTGCTTTCAAAGAATTT+CGG | - | chr3_4:76708106-76708125 | None:intergenic | 20.0% |
!!! | ATTCTTTGAAAGCAAATTTT+TGG | + | chr3_4:76708108-76708127 | Msa0523360:exon | 20.0% |
!!! | AAGTAATCTAGAGTAAATTT+TGG | + | chr3_4:76708245-76708264 | Msa0523360:three_prime_UTR | 20.0% |
!! | TTTATTCATACATAACTTAG+GGG | - | chr3_4:76708479-76708498 | None:intergenic | 20.0% |
!! | TTTATCTTCGGAAAATAAAA+AGG | - | chr3_4:76708584-76708603 | None:intergenic | 20.0% |
!!! | TTATCTTTGGTTTTTATCTT+CGG | - | chr3_4:76708596-76708615 | None:intergenic | 20.0% |
! | AAACATTTGTGCTTGTAATT+TGG | + | chr3_4:76701964-76701983 | Msa0523360:intron | 25.0% |
!! | ACTTACTTTGATTCCTTTTA+TGG | + | chr3_4:76701999-76702018 | Msa0523360:intron | 25.0% |
!! | AATTTGAAGTGATCTTTGAA+TGG | - | chr3_4:76702493-76702512 | None:intergenic | 25.0% |
! | GAGGAATATTTCATCATTAT+CGG | - | chr3_4:76702706-76702725 | None:intergenic | 25.0% |
! | GATAATCATATTACATCATC+TGG | + | chr3_4:76702753-76702772 | Msa0523360:intron | 25.0% |
!!! | CAAATGACTTTATTTTCAAG+AGG | - | chr3_4:76702848-76702867 | None:intergenic | 25.0% |
! | ATTAATCCAACAAACTAGTA+AGG | - | chr3_4:76702902-76702921 | None:intergenic | 25.0% |
! | ATGTTGGAAAGAAAATGATA+AGG | - | chr3_4:76702952-76702971 | None:intergenic | 25.0% |
! | TTTCAAATAACCTAAGATGT+TGG | - | chr3_4:76702968-76702987 | None:intergenic | 25.0% |
! | GAAAAGATTCAAAATCAGAA+AGG | - | chr3_4:76703116-76703135 | None:intergenic | 25.0% |
!! | CAAATTATTGGGGATTTTAA+TGG | + | chr3_4:76703150-76703169 | Msa0523360:CDS | 25.0% |
!! | TTTGAGATATCAATGCTAAA+AGG | + | chr3_4:76703477-76703496 | Msa0523360:intron | 25.0% |
! | TTGAGATATCAATGCTAAAA+GGG | + | chr3_4:76703478-76703497 | Msa0523360:intron | 25.0% |
! | AAATAAAATATGACTGCATG+TGG | - | chr3_4:76703888-76703907 | None:intergenic | 25.0% |
! | ATATCCAAATGATGCATAAT+AGG | - | chr3_4:76704315-76704334 | None:intergenic | 25.0% |
!! | ATCAGATATTTAAGATCTTC+GGG | - | chr3_4:76704380-76704399 | None:intergenic | 25.0% |
! | GCTAGTAATAATATTACTGA+TGG | + | chr3_4:76704455-76704474 | Msa0523360:CDS | 25.0% |
!! | TCCTTTTATCTAATTTAAGG+TGG | + | chr3_4:76704600-76704619 | Msa0523360:CDS | 25.0% |
! | ACCACCTTAAATTAGATAAA+AGG | - | chr3_4:76704604-76704623 | None:intergenic | 25.0% |
!!! | TTTTATCTAATTTAAGGTGG+TGG | + | chr3_4:76704603-76704622 | Msa0523360:CDS | 25.0% |
! | ATAATGACAAAGATCATACT+TGG | - | chr3_4:76705036-76705055 | None:intergenic | 25.0% |
! | CTATATTATTTCCAACACAA+AGG | - | chr3_4:76705078-76705097 | None:intergenic | 25.0% |
! | ATTTGTGAACAGAAAAATGA+TGG | + | chr3_4:76705115-76705134 | Msa0523360:intron | 25.0% |
!!! | ACGTCTTATATTTTTTCTCT+TGG | + | chr3_4:76705199-76705218 | Msa0523360:intron | 25.0% |
!!! | CGTCTTATATTTTTTCTCTT+GGG | + | chr3_4:76705200-76705219 | Msa0523360:intron | 25.0% |
!! | GACTATTGCATTTTTACTAA+TGG | + | chr3_4:76705243-76705262 | Msa0523360:CDS | 25.0% |
! | TATCTCACCATTAAATATTC+TGG | + | chr3_4:76705348-76705367 | Msa0523360:intron | 25.0% |
! | ATGTAGTCCAGAATATTTAA+TGG | - | chr3_4:76705358-76705377 | None:intergenic | 25.0% |
! | GTATTCTATTATGAGGATAA+TGG | - | chr3_4:76706333-76706352 | None:intergenic | 25.0% |
! | TAATAGAATACTGTGTGAAA+TGG | + | chr3_4:76706342-76706361 | Msa0523360:intron | 25.0% |
!!! | AAATGTTGTATTTCTGCTTT+TGG | + | chr3_4:76706502-76706521 | Msa0523360:intron | 25.0% |
! | TGAGAATAGTACAATCATTT+GGG | - | chr3_4:76706652-76706671 | None:intergenic | 25.0% |
! | ATGAGAATAGTACAATCATT+TGG | - | chr3_4:76706653-76706672 | None:intergenic | 25.0% |
!!! | TAGTCTATTTTAATCTGTCT+TGG | - | chr3_4:76706734-76706753 | None:intergenic | 25.0% |
! | TGAACATACAGGTATAAAAT+TGG | + | chr3_4:76707087-76707106 | Msa0523360:intron | 25.0% |
! | GAACATACAGGTATAAAATT+GGG | + | chr3_4:76707088-76707107 | Msa0523360:intron | 25.0% |
! | ATCTAATACCAGAAAGATTA+GGG | - | chr3_4:76707191-76707210 | None:intergenic | 25.0% |
! | AATCTAATACCAGAAAGATT+AGG | - | chr3_4:76707192-76707211 | None:intergenic | 25.0% |
!! | CTTTCTGGTATTAGATTATA+AGG | + | chr3_4:76707195-76707214 | Msa0523360:intron | 25.0% |
!! | TCAAATATAACTTTGAAGGA+CGG | - | chr3_4:76707235-76707254 | None:intergenic | 25.0% |
!! | AAAATCTAAAGTCTAAACTG+TGG | - | chr3_4:76707261-76707280 | None:intergenic | 25.0% |
!!! | TATTTTGAGATCGAATAATG+AGG | + | chr3_4:76707306-76707325 | Msa0523360:intron | 25.0% |
! | ACTCAGTTACTATTATTCTA+TGG | + | chr3_4:76707412-76707431 | Msa0523360:intron | 25.0% |
!! | CGATTATTGAAATTTGTTTC+AGG | - | chr3_4:76707555-76707574 | None:intergenic | 25.0% |
!!! | GAAAAGTTTATTTTTGAGCA+CGG | + | chr3_4:76707765-76707784 | Msa0523360:intron | 25.0% |
! | CACATTGTTAGAAAAAGAAA+TGG | - | chr3_4:76707806-76707825 | None:intergenic | 25.0% |
!!! | AATTAGTTTTGCTGAAAAGT+TGG | + | chr3_4:76707826-76707845 | Msa0523360:intron | 25.0% |
!! | GTAAATTTTGGATAAACTGT+TGG | + | chr3_4:76708257-76708276 | Msa0523360:three_prime_UTR | 25.0% |
! | GTAAAGTGAAGTACTAGTAA+AGG | - | chr3_4:76701614-76701633 | None:intergenic | 30.0% |
CAAAAAAGGGAAATATTACG+TGG | - | chr3_4:76701823-76701842 | None:intergenic | 30.0% | |
! | TTTTCGATCAACATACAAGA+AGG | + | chr3_4:76702114-76702133 | Msa0523360:CDS | 30.0% |
AGTATTAAGAAGGATGTTCA+GGG | + | chr3_4:76702188-76702207 | Msa0523360:intron | 30.0% | |
TGACTTATCATCTGTCATAA+CGG | - | chr3_4:76702404-76702423 | None:intergenic | 30.0% | |
! | GAAGAAGACTTTGAAAACAT+AGG | + | chr3_4:76702439-76702458 | Msa0523360:CDS | 30.0% |
! | CTTTGAAAACATAGGAATCT+TGG | + | chr3_4:76702447-76702466 | Msa0523360:CDS | 30.0% |
GTGATCTTTGAATGGTTTAA+GGG | - | chr3_4:76702485-76702504 | None:intergenic | 30.0% | |
AGTGATCTTTGAATGGTTTA+AGG | - | chr3_4:76702486-76702505 | None:intergenic | 30.0% | |
AAGCTCATTGAAGATTATGA+AGG | + | chr3_4:76702541-76702560 | Msa0523360:CDS | 30.0% | |
!! | TCATCATTATCGGTTTATCA+TGG | - | chr3_4:76702696-76702715 | None:intergenic | 30.0% |
AATATTCCTCAACTAGTACT+TGG | + | chr3_4:76702716-76702735 | Msa0523360:intron | 30.0% | |
CACAATTGATCGATTATGTT+TGG | + | chr3_4:76702813-76702832 | Msa0523360:intron | 30.0% | |
AAAGTCATTTGTCTGTCAAT+TGG | + | chr3_4:76702857-76702876 | Msa0523360:intron | 30.0% | |
! | CATTTTCTTTCCAACATCTT+AGG | + | chr3_4:76702955-76702974 | Msa0523360:intron | 30.0% |
! | TGAAGAGAAGCACAAATTAT+TGG | + | chr3_4:76703138-76703157 | Msa0523360:intron | 30.0% |
! | GAAGAGAAGCACAAATTATT+GGG | + | chr3_4:76703139-76703158 | Msa0523360:intron | 30.0% |
! | AAGAGAAGCACAAATTATTG+GGG | + | chr3_4:76703140-76703159 | Msa0523360:intron | 30.0% |
!! | TTATTGGGGATTTTAATGGA+TGG | + | chr3_4:76703154-76703173 | Msa0523360:CDS | 30.0% |
!! | TATTGGGGATTTTAATGGAT+GGG | + | chr3_4:76703155-76703174 | Msa0523360:CDS | 30.0% |
TTGAATTGTGAGGTATAACT+GGG | - | chr3_4:76703254-76703273 | None:intergenic | 30.0% | |
ACAATTCAAGAGTGAAGTTT+AGG | + | chr3_4:76703265-76703284 | Msa0523360:CDS | 30.0% | |
! | TTTAGGTTCAAACATAGTGA+TGG | + | chr3_4:76703282-76703301 | Msa0523360:CDS | 30.0% |
!!! | TCAAACATAGTGATGGATTT+TGG | + | chr3_4:76703289-76703308 | Msa0523360:CDS | 30.0% |
!!! | CAAACATAGTGATGGATTTT+GGG | + | chr3_4:76703290-76703309 | Msa0523360:CDS | 30.0% |
AGTCAGCTAATACTAATATG+TGG | - | chr3_4:76703517-76703536 | None:intergenic | 30.0% | |
!! | AAACAAGAAACTTGTTGTTC+TGG | + | chr3_4:76703926-76703945 | Msa0523360:intron | 30.0% |
!! | AACAAGAAACTTGTTGTTCT+GGG | + | chr3_4:76703927-76703946 | Msa0523360:intron | 30.0% |
!! | TGTTCTGGGTTTAATTTTCT+AGG | + | chr3_4:76703941-76703960 | Msa0523360:intron | 30.0% |
! | ATGATATTTTGCCACGTATT+CGG | + | chr3_4:76704243-76704262 | Msa0523360:CDS | 30.0% |
CATTCCTATTATGCATCATT+TGG | + | chr3_4:76704308-76704327 | Msa0523360:CDS | 30.0% | |
! | TCAGATATTTAAGATCTTCG+GGG | - | chr3_4:76704379-76704398 | None:intergenic | 30.0% |
TATTATTACTAGCATGACTG+TGG | - | chr3_4:76704448-76704467 | None:intergenic | 30.0% | |
!! | AATATTACTGATGGACTCAA+TGG | + | chr3_4:76704464-76704483 | Msa0523360:CDS | 30.0% |
AGTAAGATTCTTGTGAACTT+TGG | - | chr3_4:76704502-76704521 | None:intergenic | 30.0% | |
AAGAATCTTACTTTCACACT+GGG | + | chr3_4:76704510-76704529 | Msa0523360:CDS | 30.0% | |
!! | ACTTTTTAACTATGCCAACT+GGG | + | chr3_4:76704565-76704584 | Msa0523360:CDS | 30.0% |
!! | TTTGATGGATTTCGATTTGA+TGG | + | chr3_4:76704641-76704660 | Msa0523360:CDS | 30.0% |
TCAATGTTGTATCATCATCA+TGG | + | chr3_4:76704671-76704690 | Msa0523360:CDS | 30.0% | |
TTGCATCTGGCAAAATATTA+TGG | - | chr3_4:76704793-76704812 | None:intergenic | 30.0% | |
AGAACAAGAAAGACTATGAA+TGG | + | chr3_4:76704933-76704952 | Msa0523360:CDS | 30.0% | |
TTTCGTCGAATTTGACAAAT+AGG | + | chr3_4:76704969-76704988 | Msa0523360:CDS | 30.0% | |
TATTTGTGATACCTTTGTGT+TGG | + | chr3_4:76705064-76705083 | Msa0523360:intron | 30.0% | |
! | AGAAAAATGATGGAAACTAG+AGG | + | chr3_4:76705125-76705144 | Msa0523360:intron | 30.0% |
AAAATATAAGACGTTAGTGC+AGG | - | chr3_4:76705193-76705212 | None:intergenic | 30.0% | |
TTAAGATAGCAATGACTACA+AGG | - | chr3_4:76705441-76705460 | None:intergenic | 30.0% | |
!! | ATGAAAAATGGATTTGCTAG+AGG | + | chr3_4:76705637-76705656 | Msa0523360:intron | 30.0% |
! | AGAGTATCTTATGATTTCAC+AGG | + | chr3_4:76705810-76705829 | Msa0523360:intron | 30.0% |
TAAAATGAACCTTGACTACA+AGG | - | chr3_4:76705890-76705909 | None:intergenic | 30.0% | |
TGATTCAACAAATGACAACA+TGG | - | chr3_4:76706072-76706091 | None:intergenic | 30.0% | |
!!! | TTTTATTTAGTTTGGCCATC+CGG | + | chr3_4:76706107-76706126 | Msa0523360:intron | 30.0% |
! | GAATATTGACATCTCTTTTG+TGG | + | chr3_4:76706258-76706277 | Msa0523360:intron | 30.0% |
TCACACAGTATTCTATTATG+AGG | - | chr3_4:76706340-76706359 | None:intergenic | 30.0% | |
!!! | TCATTTTGCTTATTTCTGAG+TGG | + | chr3_4:76706371-76706390 | Msa0523360:intron | 30.0% |
AACTAAACAAAATAAGGCCA+CGG | - | chr3_4:76706411-76706430 | None:intergenic | 30.0% | |
AATACAAAGAAATCTGCAGA+CGG | - | chr3_4:76706444-76706463 | None:intergenic | 30.0% | |
AGAATAGTACAATCATTTGG+GGG | - | chr3_4:76706650-76706669 | None:intergenic | 30.0% | |
GAGAATAGTACAATCATTTG+GGG | - | chr3_4:76706651-76706670 | None:intergenic | 30.0% | |
ACATCCTAGAATATATACAC+TGG | + | chr3_4:76706753-76706772 | Msa0523360:intron | 30.0% | |
TACACCAGTGTATATATTCT+AGG | - | chr3_4:76706760-76706779 | None:intergenic | 30.0% | |
AATATATACACTGGTGTATG+AGG | + | chr3_4:76706762-76706781 | Msa0523360:intron | 30.0% | |
AGTTATGCTTGAAATCAACT+AGG | - | chr3_4:76706829-76706848 | None:intergenic | 30.0% | |
GTTAAACTATCATTTGTGTG+CGG | + | chr3_4:76706963-76706982 | Msa0523360:intron | 30.0% | |
TTAAACTATCATTTGTGTGC+GGG | + | chr3_4:76706964-76706983 | Msa0523360:intron | 30.0% | |
TGATGAAACATTGAACATAC+AGG | + | chr3_4:76707076-76707095 | Msa0523360:intron | 30.0% | |
ATATACACGCAAAAATGACA+AGG | - | chr3_4:76707456-76707475 | None:intergenic | 30.0% | |
! | ATGATTTGTCATGTCAAAGT+TGG | + | chr3_4:76707859-76707878 | Msa0523360:intron | 30.0% |
! | TGATTTGTCATGTCAAAGTT+GGG | + | chr3_4:76707860-76707879 | Msa0523360:intron | 30.0% |
! | TCCAAAGGTATATTATAGAG+TGG | + | chr3_4:76707957-76707976 | Msa0523360:intron | 30.0% |
TCCACTCTATAATATACCTT+TGG | - | chr3_4:76707961-76707980 | None:intergenic | 30.0% | |
! | TAATGAGATAAGCAGGTTTT+TGG | + | chr3_4:76708210-76708229 | Msa0523360:three_prime_UTR | 30.0% |
TTTGGATAAACTGTTGGAAA+TGG | + | chr3_4:76708263-76708282 | Msa0523360:three_prime_UTR | 30.0% | |
GAGTCAAATCTCTATCTAAA+TGG | + | chr3_4:76708351-76708370 | Msa0523360:three_prime_UTR | 30.0% | |
GATTTGATTGACCAAAGTTT+GGG | - | chr3_4:76708406-76708425 | None:intergenic | 30.0% | |
ATATTCAGAATCCATACTAG+TGG | + | chr3_4:76708522-76708541 | Msa0523360:three_prime_UTR | 30.0% | |
TATTCAGAATCCATACTAGT+GGG | + | chr3_4:76708523-76708542 | Msa0523360:three_prime_UTR | 30.0% | |
ATCTTCGGAAAATAAAAAGG+AGG | - | chr3_4:76708581-76708600 | None:intergenic | 30.0% | |
TAGAGTACAAAGAAGGAACA+GGG | - | chr3_4:76701641-76701660 | None:intergenic | 35.0% | |
TCAATGCTAGAGTACAAAGA+AGG | - | chr3_4:76701648-76701667 | None:intergenic | 35.0% | |
GATTCTTTATAAGCATGCGA+TGG | - | chr3_4:76701918-76701937 | None:intergenic | 35.0% | |
! | AAGATGCTGCTTATTTGTTG+AGG | - | chr3_4:76702029-76702048 | None:intergenic | 35.0% |
CTTGGCTATCATAATCCAAA+TGG | + | chr3_4:76702076-76702095 | Msa0523360:CDS | 35.0% | |
TCATAATCCAAATGGATGCA+AGG | + | chr3_4:76702084-76702103 | Msa0523360:CDS | 35.0% | |
!! | ACGCTGAAAGAGTATTAAGA+AGG | + | chr3_4:76702178-76702197 | Msa0523360:intron | 35.0% |
GAGTATTAAGAAGGATGTTC+AGG | + | chr3_4:76702187-76702206 | Msa0523360:intron | 35.0% | |
ACATGCTGTCTATGAATAAG+CGG | + | chr3_4:76702328-76702347 | Msa0523360:intron | 35.0% | |
! | CAATGTGTTTTCCCACAATT+AGG | + | chr3_4:76702354-76702373 | Msa0523360:intron | 35.0% |
GACAGATGATAAGTCAACAA+TGG | + | chr3_4:76702408-76702427 | Msa0523360:CDS | 35.0% | |
TGATAAGTCAACAATGGCAT+CGG | + | chr3_4:76702414-76702433 | Msa0523360:CDS | 35.0% | |
CTCATTGAAGATTATGAAGG+AGG | + | chr3_4:76702544-76702563 | Msa0523360:CDS | 35.0% | |
ACTAAATTATACAGCTGCCA+AGG | + | chr3_4:76702643-76702662 | Msa0523360:intron | 35.0% | |
! | AAAACGCCTTACTAGTTTGT+TGG | + | chr3_4:76702893-76702912 | Msa0523360:intron | 35.0% |
GGATTTAACAGAGAAGAAGA+CGG | + | chr3_4:76702991-76703010 | Msa0523360:CDS | 35.0% | |
!!! | GTTTTTTTCCATGTGATGGT+TGG | - | chr3_4:76703187-76703206 | None:intergenic | 35.0% |
!!! | ACTGGTTTTTTTCCATGTGA+TGG | - | chr3_4:76703191-76703210 | None:intergenic | 35.0% |
CACATGGAAAAAAACCAGTT+TGG | + | chr3_4:76703192-76703211 | Msa0523360:CDS | 35.0% | |
AAAAAAACCAGTTTGGCGTA+TGG | + | chr3_4:76703199-76703218 | Msa0523360:CDS | 35.0% | |
CTTGAATTGTGAGGTATAAC+TGG | - | chr3_4:76703255-76703274 | None:intergenic | 35.0% | |
AACTTCACTCTTGAATTGTG+AGG | - | chr3_4:76703264-76703283 | None:intergenic | 35.0% | |
AGTGGCATATTTAATCCAAG+CGG | - | chr3_4:76703328-76703347 | None:intergenic | 35.0% | |
TAAAATATGACTGCATGTGG+TGG | - | chr3_4:76703885-76703904 | None:intergenic | 35.0% | |
AACGCACAATAATTTCGACA+CGG | - | chr3_4:76704010-76704029 | None:intergenic | 35.0% | |
! | TGTGCGTTTTGTAATCTACT+TGG | + | chr3_4:76704022-76704041 | Msa0523360:intron | 35.0% |
ATATCTGCAGAACAAACAAG+AGG | - | chr3_4:76704114-76704133 | None:intergenic | 35.0% | |
AACCTCGCATAAACTCTTAT+AGG | + | chr3_4:76704210-76704229 | Msa0523360:CDS | 35.0% | |
ACCTCGCATAAACTCTTATA+GGG | + | chr3_4:76704211-76704230 | Msa0523360:CDS | 35.0% | |
! | TGATATTTTGCCACGTATTC+GGG | + | chr3_4:76704244-76704263 | Msa0523360:CDS | 35.0% |
!! | TAGTTATTTTCCCGAATACG+TGG | - | chr3_4:76704257-76704276 | None:intergenic | 35.0% |
! | CAGATATTTAAGATCTTCGG+GGG | - | chr3_4:76704378-76704397 | None:intergenic | 35.0% |
CAAGAATCTTACTTTCACAC+TGG | + | chr3_4:76704509-76704528 | Msa0523360:CDS | 35.0% | |
AGAATCTTACTTTCACACTG+GGG | + | chr3_4:76704511-76704530 | Msa0523360:CDS | 35.0% | |
ATAGAGGCTACCACAAATTA+TGG | + | chr3_4:76704534-76704553 | Msa0523360:CDS | 35.0% | |
TAGAGGCTACCACAAATTAT+GGG | + | chr3_4:76704535-76704554 | Msa0523360:CDS | 35.0% | |
GTCTACTATCCCATAATTTG+TGG | - | chr3_4:76704547-76704566 | None:intergenic | 35.0% | |
!! | GACTTTTTAACTATGCCAAC+TGG | + | chr3_4:76704564-76704583 | Msa0523360:CDS | 35.0% |
CTGGATGAGTTCAAATTTGA+TGG | + | chr3_4:76704626-76704645 | Msa0523360:CDS | 35.0% | |
TCATCATCATGGAATCAACA+TGG | + | chr3_4:76704682-76704701 | Msa0523360:CDS | 35.0% | |
GAATCAACATGGCATTTACA+GGG | + | chr3_4:76704693-76704712 | Msa0523360:CDS | 35.0% | |
AATCAACATGGCATTTACAG+GGG | + | chr3_4:76704694-76704713 | Msa0523360:CDS | 35.0% | |
! | TTTTAGTGAAGCAACTGATG+TGG | + | chr3_4:76704730-76704749 | Msa0523360:CDS | 35.0% |
AATATTATGGACCAGACAGT+TGG | - | chr3_4:76704780-76704799 | None:intergenic | 35.0% | |
ATCATTGCTGAAGATGTTTC+TGG | + | chr3_4:76704815-76704834 | Msa0523360:CDS | 35.0% | |
AGACTATGAATGGTCAATGA+AGG | + | chr3_4:76704943-76704962 | Msa0523360:CDS | 35.0% | |
GATGATACACTTCTTAACCA+TGG | + | chr3_4:76705470-76705489 | Msa0523360:intron | 35.0% | |
! | AGAGGGCTACCTTAATTTTA+TGG | + | chr3_4:76705503-76705522 | Msa0523360:CDS | 35.0% |
! | GAGGGCTACCTTAATTTTAT+GGG | + | chr3_4:76705504-76705523 | Msa0523360:CDS | 35.0% |
CCTCATTGCCCATAAAATTA+AGG | - | chr3_4:76705515-76705534 | None:intergenic | 35.0% | |
! | CCTTAATTTTATGGGCAATG+AGG | + | chr3_4:76705512-76705531 | Msa0523360:CDS | 35.0% |
AGGTGAATCATACAGTAACA+GGG | - | chr3_4:76705579-76705598 | None:intergenic | 35.0% | |
!! | TGCAACTTGCTGATGAAAAA+TGG | + | chr3_4:76705625-76705644 | Msa0523360:intron | 35.0% |
!! | AAAAATGGATTTGCTAGAGG+TGG | + | chr3_4:76705640-76705659 | Msa0523360:intron | 35.0% |
! | GTGTTGTGTGTTTGTTAGTT+TGG | + | chr3_4:76705678-76705697 | Msa0523360:intron | 35.0% |
CCTATTTATCAGCAATATGC+TGG | - | chr3_4:76705775-76705794 | None:intergenic | 35.0% | |
CCAGCATATTGCTGATAAAT+AGG | + | chr3_4:76705772-76705791 | Msa0523360:intron | 35.0% | |
GCATATTGCTGATAAATAGG+AGG | + | chr3_4:76705775-76705794 | Msa0523360:intron | 35.0% | |
TGTAAGTCTTCACACTTCAA+GGG | - | chr3_4:76705860-76705879 | None:intergenic | 35.0% | |
TTGTAAGTCTTCACACTTCA+AGG | - | chr3_4:76705861-76705880 | None:intergenic | 35.0% | |
ACAACTGAATGTTTCCTCTT+TGG | + | chr3_4:76705937-76705956 | Msa0523360:intron | 35.0% | |
CAACTGAATGTTTCCTCTTT+GGG | + | chr3_4:76705938-76705957 | Msa0523360:intron | 35.0% | |
! | ATGTTTCCTCTTTGGGTTTA+TGG | + | chr3_4:76705945-76705964 | Msa0523360:intron | 35.0% |
! | TGTTTCCTCTTTGGGTTTAT+GGG | + | chr3_4:76705946-76705965 | Msa0523360:intron | 35.0% |
ATACAAAGAAATCTGCAGAC+GGG | - | chr3_4:76706443-76706462 | None:intergenic | 35.0% | |
!! | CAATCTGTTTTGTTGATGCA+AGG | - | chr3_4:76706592-76706611 | None:intergenic | 35.0% |
TAGGTTATAGTCTTTGAACG+TGG | + | chr3_4:76706881-76706900 | Msa0523360:intron | 35.0% | |
ATCCAGAGAATACATACGAA+GGG | + | chr3_4:76706930-76706949 | Msa0523360:CDS | 35.0% | |
ATAAAACCAAACACACAACC+CGG | - | chr3_4:76707003-76707022 | None:intergenic | 35.0% | |
! | TCCTGATTTTACCCTATAAG+TGG | + | chr3_4:76707380-76707399 | Msa0523360:intron | 35.0% |
ACCACTTATAGGGTAAAATC+AGG | - | chr3_4:76707384-76707403 | None:intergenic | 35.0% | |
! | AAATTTGTTTCAGGAACTCC+TGG | - | chr3_4:76707546-76707565 | None:intergenic | 35.0% |
! | TCAAAGTTGGGTTTGAGTTA+TGG | + | chr3_4:76707872-76707891 | Msa0523360:intron | 35.0% |
TTGTTCTCTGTAGAAACATC+AGG | - | chr3_4:76708066-76708085 | None:intergenic | 35.0% | |
ATCAAAGAAGATGCAGACAA+CGG | + | chr3_4:76708138-76708157 | Msa0523360:three_prime_UTR | 35.0% | |
!!! | AACGGAGAATCTTTTTTCGT+TGG | + | chr3_4:76708156-76708175 | Msa0523360:three_prime_UTR | 35.0% |
!!! | ACGGAGAATCTTTTTTCGTT+GGG | + | chr3_4:76708157-76708176 | Msa0523360:three_prime_UTR | 35.0% |
!!! | TCTTTTTTCGTTGGGAATCT+TGG | + | chr3_4:76708165-76708184 | Msa0523360:three_prime_UTR | 35.0% |
AACCTACTAATGAGATAAGC+AGG | + | chr3_4:76708203-76708222 | Msa0523360:three_prime_UTR | 35.0% | |
AACCTGCTTATCTCATTAGT+AGG | - | chr3_4:76708208-76708227 | None:intergenic | 35.0% | |
CAATAGACCTCTCTATTTGT+CGG | - | chr3_4:76708297-76708316 | None:intergenic | 35.0% | |
CGATTTGATTGACCAAAGTT+TGG | - | chr3_4:76708407-76708426 | None:intergenic | 35.0% | |
GGATTCTGAATATACATGAG+TGG | - | chr3_4:76708515-76708534 | None:intergenic | 35.0% | |
ATTCAGAATCCATACTAGTG+GGG | + | chr3_4:76708524-76708543 | Msa0523360:three_prime_UTR | 35.0% | |
CTAGAGTACAAAGAAGGAAC+AGG | - | chr3_4:76701642-76701661 | None:intergenic | 40.0% | |
!! | TTCAGGTTCAGGTTGAAGAA+CGG | - | chr3_4:76701738-76701757 | None:intergenic | 40.0% |
AATCATCTGAGCTTGGATGA+AGG | - | chr3_4:76701765-76701784 | None:intergenic | 40.0% | |
AAGAGGAAATCATCTGAGCT+TGG | - | chr3_4:76701772-76701791 | None:intergenic | 40.0% | |
AAATATTACGTGGTGAGTGG+TGG | - | chr3_4:76701813-76701832 | None:intergenic | 40.0% | |
TTGTTGAGGTCTGCCATAAA+AGG | - | chr3_4:76702015-76702034 | None:intergenic | 40.0% | |
TCAAACACCTTGCATCCATT+TGG | - | chr3_4:76702094-76702113 | None:intergenic | 40.0% | |
GTTCAGGGTTAATGATCGAA+AGG | + | chr3_4:76702203-76702222 | Msa0523360:intron | 40.0% | |
ACCAGAACTGACCTAATTGT+GGG | - | chr3_4:76702368-76702387 | None:intergenic | 40.0% | |
AACCAGAACTGACCTAATTG+TGG | - | chr3_4:76702369-76702388 | None:intergenic | 40.0% | |
!! | TTAGGTCAGTTCTGGTTTCA+AGG | + | chr3_4:76702372-76702391 | Msa0523360:intron | 40.0% |
!! | TAGGTCAGTTCTGGTTTCAA+GGG | + | chr3_4:76702373-76702392 | Msa0523360:intron | 40.0% |
AGATTATGAAGGAGGTCTTG+AGG | + | chr3_4:76702552-76702571 | Msa0523360:CDS | 40.0% | |
GGTCTTGAGGAATTTGCAAA+AGG | + | chr3_4:76702565-76702584 | Msa0523360:CDS | 40.0% | |
! | TTATACAGCTGCCAAGGTTT+TGG | + | chr3_4:76702649-76702668 | Msa0523360:intron | 40.0% |
TGCAGTTATGACCAAAACCT+TGG | - | chr3_4:76702663-76702682 | None:intergenic | 40.0% | |
ATCTGGCATGCAGTTAACTT+AGG | + | chr3_4:76702770-76702789 | Msa0523360:intron | 40.0% | |
TCTGGCATGCAGTTAACTTA+GGG | + | chr3_4:76702771-76702790 | Msa0523360:intron | 40.0% | |
ATTAAGATCCCTGATGCTGA+TGG | + | chr3_4:76703225-76703244 | Msa0523360:CDS | 40.0% | |
TGGCATATTTAATCCAAGCG+GGG | - | chr3_4:76703326-76703345 | None:intergenic | 40.0% | |
GTGGCATATTTAATCCAAGC+GGG | - | chr3_4:76703327-76703346 | None:intergenic | 40.0% | |
! | TAATGGGACCTTTCTGAAAG+TGG | - | chr3_4:76703402-76703421 | None:intergenic | 40.0% |
CATGTGTGACTCAAAGATGA+AGG | - | chr3_4:76703695-76703714 | None:intergenic | 40.0% | |
ACTCCAGTCTTGATCAAGTT+TGG | + | chr3_4:76704061-76704080 | Msa0523360:intron | 40.0% | |
CATCCAAACTTGATCAAGAC+TGG | - | chr3_4:76704067-76704086 | None:intergenic | 40.0% | |
TCATAAATCCGTGGAGCTTT+GGG | - | chr3_4:76704164-76704183 | None:intergenic | 40.0% | |
TTCATAAATCCGTGGAGCTT+TGG | - | chr3_4:76704165-76704184 | None:intergenic | 40.0% | |
ACATGAGCTTCATAAATCCG+TGG | - | chr3_4:76704173-76704192 | None:intergenic | 40.0% | |
ACGGATTTATGAAGCTCATG+TGG | + | chr3_4:76704172-76704191 | Msa0523360:CDS | 40.0% | |
CGGATTTATGAAGCTCATGT+GGG | + | chr3_4:76704173-76704192 | Msa0523360:CDS | 40.0% | |
TCCCTATAAGAGTTTATGCG+AGG | - | chr3_4:76704215-76704234 | None:intergenic | 40.0% | |
CTATAATACAGTCCAGCTGA+TGG | + | chr3_4:76704274-76704293 | Msa0523360:CDS | 40.0% | |
! | TTTGCTGTGAGTAGTAGATC+TGG | + | chr3_4:76704350-76704369 | Msa0523360:CDS | 40.0% |
AACATGCAAACCTAGGCTAT+GGG | - | chr3_4:76704411-76704430 | None:intergenic | 40.0% | |
AAACATGCAAACCTAGGCTA+TGG | - | chr3_4:76704412-76704431 | None:intergenic | 40.0% | |
CCATCAAAACATGCAAACCT+AGG | - | chr3_4:76704418-76704437 | None:intergenic | 40.0% | |
!! | CCTAGGTTTGCATGTTTTGA+TGG | + | chr3_4:76704415-76704434 | Msa0523360:CDS | 40.0% |
! | ATCTAATTTAAGGTGGTGGC+TGG | + | chr3_4:76704607-76704626 | Msa0523360:CDS | 40.0% |
GGAATCAACATGGCATTTAC+AGG | + | chr3_4:76704692-76704711 | Msa0523360:CDS | 40.0% | |
TGCTGTTGTCTATTTGATGC+TGG | + | chr3_4:76704754-76704773 | Msa0523360:CDS | 40.0% | |
TCAGCAATGATAGTTGCATC+TGG | - | chr3_4:76704806-76704825 | None:intergenic | 40.0% | |
!! | TTTTGACTATCGACTAGCCA+TGG | + | chr3_4:76704880-76704899 | Msa0523360:CDS | 40.0% |
CGTAGTCAATCCACTTATCA+GGG | - | chr3_4:76704910-76704929 | None:intergenic | 40.0% | |
ACGTAGTCAATCCACTTATC+AGG | - | chr3_4:76704911-76704930 | None:intergenic | 40.0% | |
ACAAAGATCATACTTGGTCG+TGG | - | chr3_4:76705030-76705049 | None:intergenic | 40.0% | |
!! | AATAGTCTTGTCCCCAACAA+TGG | - | chr3_4:76705230-76705249 | None:intergenic | 40.0% |
CACTTCTTAACCATGGCATT+AGG | + | chr3_4:76705477-76705496 | Msa0523360:CDS | 40.0% | |
TTCTTAACCATGGCATTAGG+TGG | + | chr3_4:76705480-76705499 | Msa0523360:CDS | 40.0% | |
CAGGTGAATCATACAGTAAC+AGG | - | chr3_4:76705580-76705599 | None:intergenic | 40.0% | |
AGTGACTGTTACTCTACTAG+TGG | + | chr3_4:76705709-76705728 | Msa0523360:intron | 40.0% | |
TTGCTGATAAATAGGAGGAG+AGG | + | chr3_4:76705780-76705799 | Msa0523360:intron | 40.0% | |
TCTTATGATTTCACAGGCGT+TGG | + | chr3_4:76705816-76705835 | Msa0523360:intron | 40.0% | |
AATGAACCTTGACTACAAGG+TGG | - | chr3_4:76705887-76705906 | None:intergenic | 40.0% | |
TGCTTTCAAAGCACATACTC+TGG | + | chr3_4:76706006-76706025 | Msa0523360:intron | 40.0% | |
! | TGGATTGATTTCCCAAGAGA+AGG | + | chr3_4:76706132-76706151 | Msa0523360:CDS | 40.0% |
TACAGATCACCTGAGATACA+AGG | + | chr3_4:76706203-76706222 | Msa0523360:CDS | 40.0% | |
! | TCTTTTGTGGCTTCGTTTCT+TGG | + | chr3_4:76706271-76706290 | Msa0523360:intron | 40.0% |
CAGCACTAACAATGAAGACA+AGG | + | chr3_4:76706616-76706635 | Msa0523360:CDS | 40.0% | |
AATCAACTAGGAGTGGACAA+TGG | - | chr3_4:76706817-76706836 | None:intergenic | 40.0% | |
TGCTTGAAATCAACTAGGAG+TGG | - | chr3_4:76706824-76706843 | None:intergenic | 40.0% | |
CATCCAGAGAATACATACGA+AGG | + | chr3_4:76706929-76706948 | Msa0523360:CDS | 40.0% | |
TACCCTTCGTATGTATTCTC+TGG | - | chr3_4:76706935-76706954 | None:intergenic | 40.0% | |
TGCGGGTAATTTATTTGTGC+CGG | + | chr3_4:76706981-76707000 | Msa0523360:intron | 40.0% | |
GATAGTGATGCTCAGGAATT+TGG | + | chr3_4:76707144-76707163 | Msa0523360:CDS | 40.0% | |
TGAGGCAACATGTGTAACTT+TGG | + | chr3_4:76707324-76707343 | Msa0523360:intron | 40.0% | |
GTTGACGTCTACCACTTATA+GGG | - | chr3_4:76707394-76707413 | None:intergenic | 40.0% | |
AGTTGACGTCTACCACTTAT+AGG | - | chr3_4:76707395-76707414 | None:intergenic | 40.0% | |
TAATCGACCCAATTCCTTCA+AGG | + | chr3_4:76707569-76707588 | Msa0523360:CDS | 40.0% | |
AGAAAGCAACAGTGCCAATT+TGG | + | chr3_4:76707993-76708012 | Msa0523360:CDS | 40.0% | |
GAAAGCAACAGTGCCAATTT+GGG | + | chr3_4:76707994-76708013 | Msa0523360:CDS | 40.0% | |
CGACAAATAGAGAGGTCTAT+TGG | + | chr3_4:76708295-76708314 | Msa0523360:three_prime_UTR | 40.0% | |
ATCCTCTTGAGTAGATAGAG+AGG | - | chr3_4:76708378-76708397 | None:intergenic | 40.0% | |
GAGGATTCAAACCCAAACTT+TGG | + | chr3_4:76708392-76708411 | Msa0523360:three_prime_UTR | 40.0% | |
! | TAGAAGTGGGGGTGTACAAT+TGG | + | chr3_4:76701442-76701461 | Msa0523360:five_prime_UTR | 45.0% |
GGGTGTACAATTGGAACAGA+TGG | + | chr3_4:76701451-76701470 | Msa0523360:five_prime_UTR | 45.0% | |
TAAAAAATGGAACGGCTGCG+AGG | + | chr3_4:76701507-76701526 | Msa0523360:five_prime_UTR | 45.0% | |
! | TAGAAGTGGGGGTGTACAAT+TGG | + | chr3_4:76701442-76701461 | Msa0523360:five_prime_UTR | 45.0% |
GGGTGTACAATTGGAACAGA+TGG | + | chr3_4:76701451-76701470 | Msa0523360:five_prime_UTR | 45.0% | |
CCATGTGAAGAAGCAAGCAA+CGG | - | chr3_4:76701581-76701600 | None:intergenic | 45.0% | |
CGTTGCTTGCTTCTTCACAT+GGG | + | chr3_4:76701579-76701598 | Msa0523360:five_prime_UTR | 45.0% | |
GTTGCTTGCTTCTTCACATG+GGG | + | chr3_4:76701580-76701599 | Msa0523360:five_prime_UTR | 45.0% | |
GAAGAACGGAATGGAATGGA+GGG | - | chr3_4:76701724-76701743 | None:intergenic | 45.0% | |
TGAAGAACGGAATGGAATGG+AGG | - | chr3_4:76701725-76701744 | None:intergenic | 45.0% | |
GGTTGAAGAACGGAATGGAA+TGG | - | chr3_4:76701728-76701747 | None:intergenic | 45.0% | |
!! | GTTCAGGTTGAAGAACGGAA+TGG | - | chr3_4:76701733-76701752 | None:intergenic | 45.0% |
! | ATGAAGGAAGGTTCAGGTTC+AGG | - | chr3_4:76701749-76701768 | None:intergenic | 45.0% |
ATCTGAGCTTGGATGAAGGA+AGG | - | chr3_4:76701761-76701780 | None:intergenic | 45.0% | |
GGCAATGTTGAAAGCGAAAG+AGG | - | chr3_4:76701789-76701808 | None:intergenic | 45.0% | |
GGGAAATATTACGTGGTGAG+TGG | - | chr3_4:76701816-76701835 | None:intergenic | 45.0% | |
TAAGCATGCGATGGTGTTTG+TGG | - | chr3_4:76701909-76701928 | None:intergenic | 45.0% | |
CAAGCAAAAGCCTGTACATG+TGG | + | chr3_4:76702051-76702070 | Msa0523360:CDS | 45.0% | |
TCCCACAATTAGGTCAGTTC+TGG | + | chr3_4:76702364-76702383 | Msa0523360:intron | 45.0% | |
ACACAGCCAAGTACTAGTTG+AGG | - | chr3_4:76702725-76702744 | None:intergenic | 45.0% | |
GAGATAACTTACTGAGCAGC+AGG | - | chr3_4:76703039-76703058 | None:intergenic | 45.0% | |
!! | GGGGATTTTAATGGATGGGA+TGG | + | chr3_4:76703159-76703178 | Msa0523360:CDS | 45.0% |
TAATGCTCCATACGCCAAAC+TGG | - | chr3_4:76703209-76703228 | None:intergenic | 45.0% | |
AAATCTGGTAGGATCGACAG+TGG | - | chr3_4:76703346-76703365 | None:intergenic | 45.0% | |
ATAGATAAGGCCCATAGCCT+AGG | + | chr3_4:76704398-76704417 | Msa0523360:CDS | 45.0% | |
!! | TGGACTCAATGGCTTTGATG+TGG | + | chr3_4:76704475-76704494 | Msa0523360:CDS | 45.0% |
!! | GGACTCAATGGCTTTGATGT+GGG | + | chr3_4:76704476-76704495 | Msa0523360:CDS | 45.0% |
TACTTTCACACTGGGGATAG+AGG | + | chr3_4:76704518-76704537 | Msa0523360:CDS | 45.0% | |
GAAACGAAGAACTTCCCAGT+TGG | - | chr3_4:76704582-76704601 | None:intergenic | 45.0% | |
CTTCTCCTACTATTGACCGA+GGG | + | chr3_4:76705305-76705324 | Msa0523360:CDS | 45.0% | |
! | AACAGGGAGCAACGGTTTTT+CGG | - | chr3_4:76705563-76705582 | None:intergenic | 45.0% |
CATACAGTAACAGGGAGCAA+CGG | - | chr3_4:76705571-76705590 | None:intergenic | 45.0% | |
GACTGTTACTCTACTAGTGG+CGG | + | chr3_4:76705712-76705731 | Msa0523360:intron | 45.0% | |
!! | ATTTCACAGGCGTTGGAACT+AGG | + | chr3_4:76705823-76705842 | Msa0523360:intron | 45.0% |
CAACTACCACCTTGTAGTCA+AGG | + | chr3_4:76705878-76705897 | Msa0523360:intron | 45.0% | |
AGCAACCCATAAACCCAAAG+AGG | - | chr3_4:76705954-76705973 | None:intergenic | 45.0% | |
CTTGGGAAATCAATCCACTC+CGG | - | chr3_4:76706129-76706148 | None:intergenic | 45.0% | |
GATTTCCCAAGAGAAGGCAA+TGG | + | chr3_4:76706138-76706157 | Msa0523360:CDS | 45.0% | |
TCCATCCATTGCCTTCTCTT+GGG | - | chr3_4:76706146-76706165 | None:intergenic | 45.0% | |
GATGGAGTTACGAGAAATGC+AGG | + | chr3_4:76706160-76706179 | Msa0523360:CDS | 45.0% | |
TTGTGGCTTCGTTTCTTGGT+TGG | + | chr3_4:76706275-76706294 | Msa0523360:intron | 45.0% | |
TGTGGCTTCGTTTCTTGGTT+GGG | + | chr3_4:76706276-76706295 | Msa0523360:intron | 45.0% | |
TGGTGCATAATTCTACTCCG+TGG | + | chr3_4:76706391-76706410 | Msa0523360:intron | 45.0% | |
AGTCTTTGAACGTGGTGATC+TGG | + | chr3_4:76706889-76706908 | Msa0523360:CDS | 45.0% | |
GCGGGTAATTTATTTGTGCC+GGG | + | chr3_4:76706982-76707001 | Msa0523360:intron | 45.0% | |
! | AAAATTGGGTGTGACTTGCC+TGG | + | chr3_4:76707102-76707121 | Msa0523360:CDS | 45.0% |
! | AAATTGGGTGTGACTTGCCT+GGG | + | chr3_4:76707103-76707122 | Msa0523360:CDS | 45.0% |
AGTGCAACTCTGTATTTCCC+AGG | - | chr3_4:76707123-76707142 | None:intergenic | 45.0% | |
TGGGAAATACAGAGTTGCAC+TGG | + | chr3_4:76707122-76707141 | Msa0523360:CDS | 45.0% | |
AGTGATGCTCAGGAATTTGG+AGG | + | chr3_4:76707147-76707166 | Msa0523360:CDS | 45.0% | |
TTGGAGGACATGGAAGAGTA+AGG | + | chr3_4:76707163-76707182 | Msa0523360:intron | 45.0% | |
GTAAGGAGCCCTAATCTTTC+TGG | + | chr3_4:76707180-76707199 | Msa0523360:intron | 45.0% | |
! | ACTTTGAAGGACGGACTTGA+GGG | - | chr3_4:76707226-76707245 | None:intergenic | 45.0% |
! | AACTTTGAAGGACGGACTTG+AGG | - | chr3_4:76707227-76707246 | None:intergenic | 45.0% |
GGCAACATGTGTAACTTTGG+AGG | + | chr3_4:76707327-76707346 | Msa0523360:intron | 45.0% | |
! | GTTGACCATTTTCCACTCCT+AGG | + | chr3_4:76707479-76707498 | Msa0523360:intron | 45.0% |
! | ACCATTTTCCACTCCTAGGT+GGG | + | chr3_4:76707483-76707502 | Msa0523360:intron | 45.0% |
GAGAGGACCTTGAAGGAATT+GGG | - | chr3_4:76707579-76707598 | None:intergenic | 45.0% | |
GATCAGATCACATACCACAC+AGG | - | chr3_4:76707613-76707632 | None:intergenic | 45.0% | |
!! | TGGCACTGTTGCTTTCTTCT+TGG | - | chr3_4:76707990-76708009 | None:intergenic | 45.0% |
GGACTCTTCTACACCCAAAT+TGG | - | chr3_4:76708010-76708029 | None:intergenic | 45.0% | |
ATCAGTATCTGCTGCAGCAA+AGG | - | chr3_4:76708031-76708050 | None:intergenic | 45.0% | |
CTCCTTTCCGACAAATAGAG+AGG | + | chr3_4:76708287-76708306 | Msa0523360:three_prime_UTR | 45.0% | |
GACCTCTCTATTTGTCGGAA+AGG | - | chr3_4:76708292-76708311 | None:intergenic | 45.0% | |
GAGAGGTCTATTGGAGAGAT+TGG | + | chr3_4:76708304-76708323 | Msa0523360:three_prime_UTR | 45.0% | |
GACCTCTCTATCTACTCAAG+AGG | + | chr3_4:76708373-76708392 | Msa0523360:three_prime_UTR | 45.0% | |
ATCCATACTAGTGGGGATCA+TGG | + | chr3_4:76708531-76708550 | Msa0523360:three_prime_UTR | 45.0% | |
TCCATACTAGTGGGGATCAT+GGG | + | chr3_4:76708532-76708551 | Msa0523360:three_prime_UTR | 45.0% | |
!!! | GTTTAAAATAAAATAAAAAA+TGG | + | chr3_4:76701494-76701513 | Msa0523360:five_prime_UTR | 5.0% |
CTGCGAGGAGAAGTAGAAGT+GGG | + | chr3_4:76701522-76701541 | Msa0523360:five_prime_UTR | 50.0% | |
TGCGAGGAGAAGTAGAAGTG+GGG | + | chr3_4:76701523-76701542 | Msa0523360:five_prime_UTR | 50.0% | |
CCGTTGCTTGCTTCTTCACA+TGG | + | chr3_4:76701578-76701597 | Msa0523360:five_prime_UTR | 50.0% | |
GCTTGGATGAAGGAAGGTTC+AGG | - | chr3_4:76701755-76701774 | None:intergenic | 50.0% | |
TATTACGTGGTGAGTGGTGG+AGG | - | chr3_4:76701810-76701829 | None:intergenic | 50.0% | |
AAGCCTGTACATGTGGCACT+TGG | + | chr3_4:76702058-76702077 | Msa0523360:CDS | 50.0% | |
TAGCCAAGTGCCACATGTAC+AGG | - | chr3_4:76702064-76702083 | None:intergenic | 50.0% | |
GAAATGGGTAGCCTAGTGTG+TGG | + | chr3_4:76702149-76702168 | Msa0523360:intron | 50.0% | |
GGTAGCCTAGTGTGTGGATT+GGG | + | chr3_4:76702155-76702174 | Msa0523360:intron | 50.0% | |
GGATGGTTCCAACCATCACA+TGG | + | chr3_4:76703176-76703195 | Msa0523360:CDS | 50.0% | |
CTGGGTTTCCATCAGCATCA+GGG | - | chr3_4:76703236-76703255 | None:intergenic | 50.0% | |
ACTGGGTTTCCATCAGCATC+AGG | - | chr3_4:76703237-76703256 | None:intergenic | 50.0% | |
GGGATCCACCACTTTCAGAA+AGG | + | chr3_4:76703391-76703410 | Msa0523360:CDS | 50.0% | |
! | TGGGACCTTTCTGAAAGTGG+TGG | - | chr3_4:76703399-76703418 | None:intergenic | 50.0% |
TTTGATGCTGGCCAACTGTC+TGG | + | chr3_4:76704766-76704785 | Msa0523360:CDS | 50.0% | |
!! | GAAGATGTTTCTGGCATGCC+TGG | + | chr3_4:76704824-76704843 | Msa0523360:CDS | 50.0% |
CCACTTATCAGGGATAGCCA+TGG | - | chr3_4:76704900-76704919 | None:intergenic | 50.0% | |
CCATGGCTATCCCTGATAAG+TGG | + | chr3_4:76704897-76704916 | Msa0523360:CDS | 50.0% | |
TCTCTTGGGCAGTCCATTGT+TGG | + | chr3_4:76705214-76705233 | Msa0523360:intron | 50.0% | |
CTCTTGGGCAGTCCATTGTT+GGG | + | chr3_4:76705215-76705234 | Msa0523360:intron | 50.0% | |
TCTTGGGCAGTCCATTGTTG+GGG | + | chr3_4:76705216-76705235 | Msa0523360:intron | 50.0% | |
GCTTCTCCTACTATTGACCG+AGG | + | chr3_4:76705304-76705323 | Msa0523360:CDS | 50.0% | |
GCAATCCCTCGGTCAATAGT+AGG | - | chr3_4:76705313-76705332 | None:intergenic | 50.0% | |
CCTTGTGAAGAGCAATCCCT+CGG | - | chr3_4:76705324-76705343 | None:intergenic | 50.0% | |
AACCATGGCATTAGGTGGAG+AGG | + | chr3_4:76705485-76705504 | Msa0523360:CDS | 50.0% | |
ACCATGGCATTAGGTGGAGA+GGG | + | chr3_4:76705486-76705505 | Msa0523360:CDS | 50.0% | |
! | ACAGGGAGCAACGGTTTTTC+GGG | - | chr3_4:76705562-76705581 | None:intergenic | 50.0% |
TGTTACTCTACTAGTGGCGG+AGG | + | chr3_4:76705715-76705734 | Msa0523360:intron | 50.0% | |
!! | TTTAGTTTGGCCATCCGGAG+TGG | + | chr3_4:76706112-76706131 | Msa0523360:intron | 50.0% |
GGAAATCAATCCACTCCGGA+TGG | - | chr3_4:76706125-76706144 | None:intergenic | 50.0% | |
TCCCAAGAGAAGGCAATGGA+TGG | + | chr3_4:76706142-76706161 | Msa0523360:CDS | 50.0% | |
CTCCATCCATTGCCTTCTCT+TGG | - | chr3_4:76706147-76706166 | None:intergenic | 50.0% | |
TTTGTGCCGGGTTGTGTGTT+TGG | + | chr3_4:76706994-76707013 | Msa0523360:intron | 50.0% | |
TGCACTGGATAGTGATGCTC+AGG | + | chr3_4:76707137-76707156 | Msa0523360:CDS | 50.0% | |
GCTCAGGAATTTGGAGGACA+TGG | + | chr3_4:76707153-76707172 | Msa0523360:CDS | 50.0% | |
! | GACCATTTTCCACTCCTAGG+TGG | + | chr3_4:76707482-76707501 | Msa0523360:intron | 50.0% |
TCCCACCTAGGAGTGGAAAA+TGG | - | chr3_4:76707487-76707506 | None:intergenic | 50.0% | |
AACTCCTGGTATGCCTTCTG+GGG | - | chr3_4:76707532-76707551 | None:intergenic | 50.0% | |
GAACTCCTGGTATGCCTTCT+GGG | - | chr3_4:76707533-76707552 | None:intergenic | 50.0% | |
GGAGAGGACCTTGAAGGAAT+TGG | - | chr3_4:76707580-76707599 | None:intergenic | 50.0% | |
ATACCACACAGGTACGAGGT+GGG | - | chr3_4:76707602-76707621 | None:intergenic | 50.0% | |
TCACATACCACACAGGTACG+AGG | - | chr3_4:76707606-76707625 | None:intergenic | 50.0% | |
TCCCATGATCCCCACTAGTA+TGG | - | chr3_4:76708536-76708555 | None:intergenic | 50.0% | |
GCTGCGAGGAGAAGTAGAAG+TGG | + | chr3_4:76701521-76701540 | Msa0523360:five_prime_UTR | 55.0% | |
GCGAGGAGAAGTAGAAGTGG+GGG | + | chr3_4:76701524-76701543 | Msa0523360:five_prime_UTR | 55.0% | |
GGGTAGCCTAGTGTGTGGAT+TGG | + | chr3_4:76702154-76702173 | Msa0523360:intron | 55.0% | |
AGCGTCCCAATCCACACACT+AGG | - | chr3_4:76702163-76702182 | None:intergenic | 55.0% | |
TAGGGTGCGGCAAATCTGGT+AGG | - | chr3_4:76703357-76703376 | None:intergenic | 55.0% | |
AGATTTGCCGCACCCTACGA+CGG | + | chr3_4:76703360-76703379 | Msa0523360:CDS | 55.0% | |
ACCCTACGACGGTGTCTACT+GGG | + | chr3_4:76703371-76703390 | Msa0523360:CDS | 55.0% | |
TCCCAGTAGACACCGTCGTA+GGG | - | chr3_4:76703375-76703394 | None:intergenic | 55.0% | |
ATCCCAGTAGACACCGTCGT+AGG | - | chr3_4:76703376-76703395 | None:intergenic | 55.0% | |
!! | ATCCGTGGAGCTTTGGGCTT+CGG | - | chr3_4:76704158-76704177 | None:intergenic | 55.0% |
AGTCCAGCTGATGGCTGTGA+TGG | + | chr3_4:76704283-76704302 | Msa0523360:CDS | 55.0% | |
!! | GTTTCTGGCATGCCTGGACT+CGG | + | chr3_4:76704830-76704849 | Msa0523360:CDS | 55.0% |
TTCCCGCCTCAGAAACTGGT+CGG | - | chr3_4:76704856-76704875 | None:intergenic | 55.0% | |
CCAATTCCCGCCTCAGAAAC+TGG | - | chr3_4:76704860-76704879 | None:intergenic | 55.0% | |
!! | CCAGTTTCTGAGGCGGGAAT+TGG | + | chr3_4:76704857-76704876 | Msa0523360:CDS | 55.0% |
CCGAGGGATTGCTCTTCACA+AGG | + | chr3_4:76705321-76705340 | Msa0523360:CDS | 55.0% | |
!! | CACAGGCGTTGGAACTAGGT+AGG | + | chr3_4:76705827-76705846 | Msa0523360:intron | 55.0% |
ACGAGAAATGCAGGCGTCAG+TGG | + | chr3_4:76706169-76706188 | Msa0523360:CDS | 55.0% | |
CAGGCGTCAGTGGAATCTTG+TGG | + | chr3_4:76706179-76706198 | Msa0523360:CDS | 55.0% | |
CGCACGCTACCTTGTATCTC+AGG | - | chr3_4:76706215-76706234 | None:intergenic | 55.0% | |
CATCATGTCCCACCTAGGAG+TGG | - | chr3_4:76707494-76707513 | None:intergenic | 55.0% | |
GTCTGCATCATGTCCCACCT+AGG | - | chr3_4:76707499-76707518 | None:intergenic | 55.0% | |
GACCACTTCACATCCCCAGA+AGG | + | chr3_4:76707516-76707535 | Msa0523360:CDS | 55.0% | |
! | TGCCTTCTGGGGATGTGAAG+TGG | - | chr3_4:76707521-76707540 | None:intergenic | 55.0% |
! | ACATCCCCAGAAGGCATACC+AGG | + | chr3_4:76707525-76707544 | Msa0523360:CDS | 55.0% |
GGAACTCCTGGTATGCCTTC+TGG | - | chr3_4:76707534-76707553 | None:intergenic | 55.0% | |
TACCACACAGGTACGAGGTG+GGG | - | chr3_4:76707601-76707620 | None:intergenic | 55.0% | |
CATACCACACAGGTACGAGG+TGG | - | chr3_4:76707603-76707622 | None:intergenic | 55.0% | |
ACGGCGTTGTGTACCGTGAG+TGG | + | chr3_4:76703010-76703029 | Msa0523360:CDS | 60.0% | |
CGGCGTTGTGTACCGTGAGT+GGG | + | chr3_4:76703011-76703030 | Msa0523360:CDS | 60.0% | |
GTCGTAGGGTGCGGCAAATC+TGG | - | chr3_4:76703361-76703380 | None:intergenic | 60.0% | |
GTAGACACCGTCGTAGGGTG+CGG | - | chr3_4:76703370-76703389 | None:intergenic | 60.0% | |
CACCCTACGACGGTGTCTAC+TGG | + | chr3_4:76703370-76703389 | Msa0523360:CDS | 60.0% | |
!! | AGCTTTGGGCTTCGGTGGAC+GGG | - | chr3_4:76704150-76704169 | None:intergenic | 60.0% |
!! | GAGCTTTGGGCTTCGGTGGA+CGG | - | chr3_4:76704151-76704170 | None:intergenic | 60.0% |
CACCGAAGCCCAAAGCTCCA+CGG | + | chr3_4:76704153-76704172 | Msa0523360:CDS | 60.0% | |
GCTCCATCACAGCCATCAGC+TGG | - | chr3_4:76704289-76704308 | None:intergenic | 60.0% | |
ACTCGGCCGACCAGTTTCTG+AGG | + | chr3_4:76704847-76704866 | Msa0523360:CDS | 60.0% | |
GCCCTCTCCACCTAATGCCA+TGG | - | chr3_4:76705490-76705509 | None:intergenic | 60.0% | |
AGGTGGGGAGAGGACCTTGA+AGG | - | chr3_4:76707586-76707605 | None:intergenic | 60.0% | |
GAGCAGCAGGTGCCCACTCA+CGG | - | chr3_4:76703026-76703045 | None:intergenic | 65.0% | |
! | GGGTTGATCGCATCCCCGCT+TGG | + | chr3_4:76703310-76703329 | Msa0523360:CDS | 65.0% |
! | GCTTTGGGCTTCGGTGGACG+GGG | - | chr3_4:76704149-76704168 | None:intergenic | 65.0% |
!! | CGTGGAGCTTTGGGCTTCGG+TGG | - | chr3_4:76704155-76704174 | None:intergenic | 65.0% |
GAAACTGGTCGGCCGAGTCC+AGG | - | chr3_4:76704845-76704864 | None:intergenic | 65.0% | |
! | CGGCCGACCAGTTTCTGAGG+CGG | + | chr3_4:76704850-76704869 | Msa0523360:CDS | 65.0% |
!! | GGCCGACCAGTTTCTGAGGC+GGG | + | chr3_4:76704851-76704870 | Msa0523360:CDS | 65.0% |
CACAGGTACGAGGTGGGGAG+AGG | - | chr3_4:76707596-76707615 | None:intergenic | 65.0% | |
CTCCCCACCTCGTACCTGTG+TGG | + | chr3_4:76707596-76707615 | Msa0523360:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 76701440 | 76708615 | 76701440 | ID=Msa0523360;Name=Msa0523360 |
chr3_4 | mRNA | 76701440 | 76708615 | 76701440 | ID=Msa0523360-mRNA-1;Parent=Msa0523360;Name=Msa0523360-mRNA-1;_AED=0.06;_eAED=0.06;_QI=339|1|1|1|0.92|0.92|14|499|807 |
chr3_4 | exon | 76701440 | 76701823 | 76701440 | ID=Msa0523360-mRNA-1:exon:22328;Parent=Msa0523360-mRNA-1 |
chr3_4 | exon | 76702025 | 76702135 | 76702025 | ID=Msa0523360-mRNA-1:exon:22329;Parent=Msa0523360-mRNA-1 |
chr3_4 | exon | 76702376 | 76702586 | 76702376 | ID=Msa0523360-mRNA-1:exon:22330;Parent=Msa0523360-mRNA-1 |
chr3_4 | exon | 76702977 | 76703046 | 76702977 | ID=Msa0523360-mRNA-1:exon:22331;Parent=Msa0523360-mRNA-1 |
chr3_4 | exon | 76703143 | 76703412 | 76703143 | ID=Msa0523360-mRNA-1:exon:22332;Parent=Msa0523360-mRNA-1 |
chr3_4 | exon | 76704130 | 76705036 | 76704130 | ID=Msa0523360-mRNA-1:exon:22333;Parent=Msa0523360-mRNA-1 |
chr3_4 | exon | 76705226 | 76705342 | 76705226 | ID=Msa0523360-mRNA-1:exon:22334;Parent=Msa0523360-mRNA-1 |
chr3_4 | exon | 76705471 | 76705533 | 76705471 | ID=Msa0523360-mRNA-1:exon:22335;Parent=Msa0523360-mRNA-1 |
chr3_4 | exon | 76706117 | 76706224 | 76706117 | ID=Msa0523360-mRNA-1:exon:22336;Parent=Msa0523360-mRNA-1 |
chr3_4 | exon | 76706536 | 76706637 | 76706536 | ID=Msa0523360-mRNA-1:exon:22337;Parent=Msa0523360-mRNA-1 |
chr3_4 | exon | 76706884 | 76706951 | 76706884 | ID=Msa0523360-mRNA-1:exon:22338;Parent=Msa0523360-mRNA-1 |
chr3_4 | exon | 76707098 | 76707179 | 76707098 | ID=Msa0523360-mRNA-1:exon:22339;Parent=Msa0523360-mRNA-1 |
chr3_4 | exon | 76707501 | 76707617 | 76707501 | ID=Msa0523360-mRNA-1:exon:22340;Parent=Msa0523360-mRNA-1 |
chr3_4 | exon | 76707964 | 76708615 | 76707964 | ID=Msa0523360-mRNA-1:exon:22341;Parent=Msa0523360-mRNA-1 |
chr3_4 | five_prime_UTR | 76701440 | 76701778 | 76701440 | ID=Msa0523360-mRNA-1:five_prime_utr;Parent=Msa0523360-mRNA-1 |
chr3_4 | CDS | 76701779 | 76701823 | 76701779 | ID=Msa0523360-mRNA-1:cds;Parent=Msa0523360-mRNA-1 |
chr3_4 | CDS | 76702025 | 76702135 | 76702025 | ID=Msa0523360-mRNA-1:cds;Parent=Msa0523360-mRNA-1 |
chr3_4 | CDS | 76702376 | 76702586 | 76702376 | ID=Msa0523360-mRNA-1:cds;Parent=Msa0523360-mRNA-1 |
chr3_4 | CDS | 76702977 | 76703046 | 76702977 | ID=Msa0523360-mRNA-1:cds;Parent=Msa0523360-mRNA-1 |
chr3_4 | CDS | 76703143 | 76703412 | 76703143 | ID=Msa0523360-mRNA-1:cds;Parent=Msa0523360-mRNA-1 |
chr3_4 | CDS | 76704130 | 76705036 | 76704130 | ID=Msa0523360-mRNA-1:cds;Parent=Msa0523360-mRNA-1 |
chr3_4 | CDS | 76705226 | 76705342 | 76705226 | ID=Msa0523360-mRNA-1:cds;Parent=Msa0523360-mRNA-1 |
chr3_4 | CDS | 76705471 | 76705533 | 76705471 | ID=Msa0523360-mRNA-1:cds;Parent=Msa0523360-mRNA-1 |
chr3_4 | CDS | 76706117 | 76706224 | 76706117 | ID=Msa0523360-mRNA-1:cds;Parent=Msa0523360-mRNA-1 |
chr3_4 | CDS | 76706536 | 76706637 | 76706536 | ID=Msa0523360-mRNA-1:cds;Parent=Msa0523360-mRNA-1 |
chr3_4 | CDS | 76706884 | 76706951 | 76706884 | ID=Msa0523360-mRNA-1:cds;Parent=Msa0523360-mRNA-1 |
chr3_4 | CDS | 76707098 | 76707179 | 76707098 | ID=Msa0523360-mRNA-1:cds;Parent=Msa0523360-mRNA-1 |
chr3_4 | CDS | 76707501 | 76707617 | 76707501 | ID=Msa0523360-mRNA-1:cds;Parent=Msa0523360-mRNA-1 |
chr3_4 | CDS | 76707964 | 76708116 | 76707964 | ID=Msa0523360-mRNA-1:cds;Parent=Msa0523360-mRNA-1 |
chr3_4 | three_prime_UTR | 76708117 | 76708615 | 76708117 | ID=Msa0523360-mRNA-1:three_prime_utr;Parent=Msa0523360-mRNA-1 |
Gene Sequence |
Protein sequence |