Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1255520 | XP_003629519.1 | 96.262 | 535 | 16 | 1 | 1 | 535 | 1 | 531 | 0.0 | 1069 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1255520 | sp|Q8W4F0|DAR1_ARATH | 68.327 | 562 | 142 | 5 | 1 | 535 | 1 | 553 | 0.0 | 735 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1255520 | G7LFK8 | 96.262 | 535 | 16 | 1 | 1 | 535 | 1 | 531 | 0.0 | 1069 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1255520 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa1255520 | 0.810565 | 1.081941e-50 | -8.615850e-47 |
| Msa0008330 | Msa1255520 | 0.802131 | 6.488835e-49 | -8.615850e-47 |
| Msa0008850 | Msa1255520 | 0.811125 | 8.185869e-51 | -8.615850e-47 |
| Msa0021980 | Msa1255520 | 0.808877 | 2.495784e-50 | -8.615850e-47 |
| Msa0026670 | Msa1255520 | 0.805052 | 1.608063e-49 | -8.615850e-47 |
| Msa0049330 | Msa1255520 | 0.816045 | 6.769185e-52 | -8.615850e-47 |
| Msa0053960 | Msa1255520 | 0.804372 | 2.229312e-49 | -8.615850e-47 |
| Msa0055280 | Msa1255520 | 0.816294 | 5.954599e-52 | -8.615850e-47 |
| Msa0101060 | Msa1255520 | 0.816574 | 5.155005e-52 | -8.615850e-47 |
| Msa0605230 | Msa1255520 | 0.808316 | 3.288803e-50 | -8.615850e-47 |
| Msa0610710 | Msa1255520 | 0.813455 | 2.537710e-51 | -8.615850e-47 |
| Msa0617830 | Msa1255520 | 0.818793 | 1.628238e-52 | -8.615850e-47 |
| Msa0620640 | Msa1255520 | 0.812019 | 5.231918e-51 | -8.615850e-47 |
| Msa0622390 | Msa1255520 | 0.802692 | 4.972071e-49 | -8.615850e-47 |
| Msa0626230 | Msa1255520 | 0.852312 | 5.012946e-61 | -8.615850e-47 |
| Msa0626890 | Msa1255520 | 0.802940 | 4.418906e-49 | -8.615850e-47 |
| Msa0639030 | Msa1255520 | 0.820165 | 7.923044e-53 | -8.615850e-47 |
| Msa0646390 | Msa1255520 | 0.816483 | 5.402437e-52 | -8.615850e-47 |
| Msa0656680 | Msa1255520 | 0.818211 | 2.206938e-52 | -8.615850e-47 |
| Msa0664110 | Msa1255520 | 0.805104 | 1.568130e-49 | -8.615850e-47 |
| Msa0664130 | Msa1255520 | 0.819604 | 1.064303e-52 | -8.615850e-47 |
| Msa0672810 | Msa1255520 | 0.807181 | 5.729409e-50 | -8.615850e-47 |
| Msa0672850 | Msa1255520 | 0.827663 | 1.381308e-54 | -8.615850e-47 |
| Msa0685880 | Msa1255520 | 0.819388 | 1.192548e-52 | -8.615850e-47 |
| Msa0697600 | Msa1255520 | 0.818252 | 2.159524e-52 | -8.615850e-47 |
| Msa0719970 | Msa1255520 | 0.810309 | 1.228858e-50 | -8.615850e-47 |
| Msa0722930 | Msa1255520 | 0.820812 | 5.627962e-53 | -8.615850e-47 |
| Msa0723140 | Msa1255520 | 0.831652 | 1.478322e-55 | -8.615850e-47 |
| Msa0739610 | Msa1255520 | 0.802266 | 6.086013e-49 | -8.615850e-47 |
| Msa0742500 | Msa1255520 | 0.805669 | 1.193656e-49 | -8.615850e-47 |
| Msa0748980 | Msa1255520 | 0.806137 | 9.519922e-50 | -8.615850e-47 |
| Msa0756940 | Msa1255520 | 0.804372 | 2.229581e-49 | -8.615850e-47 |
| Msa0779540 | Msa1255520 | 0.817566 | 3.085816e-52 | -8.615850e-47 |
| Msa0789270 | Msa1255520 | 0.811409 | 7.101867e-51 | -8.615850e-47 |
| Msa0789280 | Msa1255520 | 0.810063 | 1.388588e-50 | -8.615850e-47 |
| Msa0789290 | Msa1255520 | 0.815772 | 7.788520e-52 | -8.615850e-47 |
| Msa0789300 | Msa1255520 | 0.816923 | 4.304440e-52 | -8.615850e-47 |
| Msa0792510 | Msa1255520 | 0.832049 | 1.179869e-55 | -8.615850e-47 |
| Msa0836190 | Msa1255520 | 0.818639 | 1.764438e-52 | -8.615850e-47 |
| Msa0145180 | Msa1255520 | 0.815092 | 1.103754e-51 | -8.615850e-47 |
| Msa0148430 | Msa1255520 | 0.800507 | 1.394994e-48 | -8.615850e-47 |
| Msa0151690 | Msa1255520 | 0.804340 | 2.263767e-49 | -8.615850e-47 |
| Msa0169960 | Msa1255520 | 0.810604 | 1.061309e-50 | -8.615850e-47 |
| Msa0181410 | Msa1255520 | 0.807525 | 4.844860e-50 | -8.615850e-47 |
| Msa0190980 | Msa1255520 | 0.801500 | 8.742870e-49 | -8.615850e-47 |
| Msa0198440 | Msa1255520 | 0.815600 | 8.506265e-52 | -8.615850e-47 |
| Msa0203180 | Msa1255520 | 0.803698 | 3.078689e-49 | -8.615850e-47 |
| Msa0213090 | Msa1255520 | 0.840461 | 8.578095e-58 | -8.615850e-47 |
| Msa0213650 | Msa1255520 | 0.809776 | 1.601174e-50 | -8.615850e-47 |
| Msa1238370 | Msa1255520 | 0.836603 | 8.497049e-57 | -8.615850e-47 |
| Msa1255520 | Msa1259010 | 0.827705 | 1.349787e-54 | -8.615850e-47 |
| Msa1255520 | Msa1297710 | 0.834236 | 3.368943e-56 | -8.615850e-47 |
| Msa1255520 | Msa1304850 | 0.818382 | 2.018323e-52 | -8.615850e-47 |
| Msa1255520 | Msa1310340 | 0.808960 | 2.395203e-50 | -8.615850e-47 |
| Msa1255520 | Msa1314330 | 0.812217 | 4.736571e-51 | -8.615850e-47 |
| Msa1255520 | Msa1330660 | 0.816774 | 4.649329e-52 | -8.615850e-47 |
| Msa1255520 | Msa1343340 | 0.810227 | 1.280302e-50 | -8.615850e-47 |
| Msa1255520 | Msa1358870 | -0.806682 | 7.305544e-50 | -8.615850e-47 |
| Msa1255520 | Msa1373950 | 0.839622 | 1.419577e-57 | -8.615850e-47 |
| Msa1255520 | Msa1384620 | 0.804836 | 1.784314e-49 | -8.615850e-47 |
| Msa1255520 | Msa1392680 | 0.803678 | 3.107966e-49 | -8.615850e-47 |
| Msa1255520 | Msa1395640 | 0.814536 | 1.465495e-51 | -8.615850e-47 |
| Msa1255520 | Msa1397540 | 0.832665 | 8.302198e-56 | -8.615850e-47 |
| Msa1255520 | Msa1405470 | 0.820763 | 5.775537e-53 | -8.615850e-47 |
| Msa1255520 | Msa1410180 | 0.806054 | 9.911223e-50 | -8.615850e-47 |
| Msa1255520 | Msa1424510 | 0.814837 | 1.256789e-51 | -8.615850e-47 |
| Msa1255520 | Msa1435470 | 0.806392 | 8.409562e-50 | -8.615850e-47 |
| Msa1255520 | Msa1457180 | 0.809495 | 1.839868e-50 | -8.615850e-47 |
| Msa1255520 | Msa1458920 | 0.800447 | 1.435402e-48 | -8.615850e-47 |
| Msa1255520 | Msa1460310 | -0.820359 | 7.152712e-53 | -8.615850e-47 |
| Msa0411000 | Msa1255520 | 0.804143 | 2.488784e-49 | -8.615850e-47 |
| Msa0427050 | Msa1255520 | 0.806967 | 6.360539e-50 | -8.615850e-47 |
| Msa0431250 | Msa1255520 | 0.817192 | 3.745246e-52 | -8.615850e-47 |
| Msa0440110 | Msa1255520 | 0.819345 | 1.219611e-52 | -8.615850e-47 |
| Msa0454940 | Msa1255520 | 0.806399 | 8.383894e-50 | -8.615850e-47 |
| Msa0458790 | Msa1255520 | 0.807321 | 5.352940e-50 | -8.615850e-47 |
| Msa0984850 | Msa1255520 | 0.817006 | 4.123561e-52 | -8.615850e-47 |
| Msa0984860 | Msa1255520 | 0.807372 | 5.220422e-50 | -8.615850e-47 |
| Msa1016670 | Msa1255520 | 0.807067 | 6.057682e-50 | -8.615850e-47 |
| Msa1036390 | Msa1255520 | 0.814127 | 1.804832e-51 | -8.615850e-47 |
| Msa1044450 | Msa1255520 | 0.826394 | 2.779149e-54 | -8.615850e-47 |
| Msa1067710 | Msa1255520 | 0.815491 | 8.997730e-52 | -8.615850e-47 |
| Msa1070830 | Msa1255520 | 0.815026 | 1.141345e-51 | -8.615850e-47 |
| Msa1076680 | Msa1255520 | 0.824319 | 8.608981e-54 | -8.615850e-47 |
| Msa1102540 | Msa1255520 | 0.810040 | 1.404224e-50 | -8.615850e-47 |
| Msa0244740 | Msa1255520 | 0.811143 | 8.114273e-51 | -8.615850e-47 |
| Msa0253370 | Msa1255520 | 0.838560 | 2.674923e-57 | -8.615850e-47 |
| Msa0260910 | Msa1255520 | 0.803766 | 2.981155e-49 | -8.615850e-47 |
| Msa0264940 | Msa1255520 | -0.816375 | 5.712595e-52 | -8.615850e-47 |
| Msa0278670 | Msa1255520 | 0.815340 | 9.721948e-52 | -8.615850e-47 |
| Msa0284870 | Msa1255520 | 0.802924 | 4.452384e-49 | -8.615850e-47 |
| Msa0302990 | Msa1255520 | -0.819158 | 1.344891e-52 | -8.615850e-47 |
| Msa0318070 | Msa1255520 | 0.800119 | 1.673486e-48 | -8.615850e-47 |
| Msa0330400 | Msa1255520 | 0.845268 | 4.515180e-59 | -8.615850e-47 |
| Msa0343200 | Msa1255520 | 0.801301 | 9.604174e-49 | -8.615850e-47 |
| Msa0362430 | Msa1255520 | 0.825355 | 4.904715e-54 | -8.615850e-47 |
| Msa1108780 | Msa1255520 | 0.803335 | 3.661561e-49 | -8.615850e-47 |
| Msa1113210 | Msa1255520 | 0.800050 | 1.728641e-48 | -8.615850e-47 |
| Msa1166170 | Msa1255520 | 0.802210 | 6.251026e-49 | -8.615850e-47 |
| Msa1178920 | Msa1255520 | 0.818112 | 2.323502e-52 | -8.615850e-47 |
| Msa1182830 | Msa1255520 | 0.801139 | 1.036582e-48 | -8.615850e-47 |
| Msa1191390 | Msa1255520 | 0.827739 | 1.324440e-54 | -8.615850e-47 |
| Msa1205510 | Msa1255520 | 0.803651 | 3.149153e-49 | -8.615850e-47 |
| Msa1205550 | Msa1255520 | 0.808894 | 2.474563e-50 | -8.615850e-47 |
| Msa1208810 | Msa1255520 | 0.838699 | 2.462636e-57 | -8.615850e-47 |
| Msa1211070 | Msa1255520 | 0.802791 | 4.743119e-49 | -8.615850e-47 |
| Msa1221200 | Msa1255520 | -0.820078 | 8.295067e-53 | -8.615850e-47 |
| Msa0502910 | Msa1255520 | 0.836396 | 9.593305e-57 | -8.615850e-47 |
| Msa0505390 | Msa1255520 | 0.800488 | 1.407736e-48 | -8.615850e-47 |
| Msa0511890 | Msa1255520 | 0.801048 | 1.081793e-48 | -8.615850e-47 |
| Msa0523360 | Msa1255520 | 0.803187 | 3.928863e-49 | -8.615850e-47 |
| Msa0549740 | Msa1255520 | 0.848622 | 5.450343e-60 | -8.615850e-47 |
| Msa0556040 | Msa1255520 | 0.817332 | 3.483262e-52 | -8.615850e-47 |
| Msa0579180 | Msa1255520 | 0.804825 | 1.793308e-49 | -8.615850e-47 |
| Msa0579240 | Msa1255520 | 0.809143 | 2.189344e-50 | -8.615850e-47 |
| Msa0582110 | Msa1255520 | 0.814749 | 1.314793e-51 | -8.615850e-47 |
| Msa0585930 | Msa1255520 | 0.802731 | 4.880817e-49 | -8.615850e-47 |
| Msa0594440 | Msa1255520 | 0.804544 | 2.052673e-49 | -8.615850e-47 |
| Msa0843280 | Msa1255520 | 0.840482 | 8.467707e-58 | -8.615850e-47 |
| Msa0847200 | Msa1255520 | 0.813135 | 2.982781e-51 | -8.615850e-47 |
| Msa0883350 | Msa1255520 | 0.816251 | 6.087954e-52 | -8.615850e-47 |
| Msa0883390 | Msa1255520 | 0.806066 | 9.854099e-50 | -8.615850e-47 |
| Msa0883410 | Msa1255520 | 0.813607 | 2.349955e-51 | -8.615850e-47 |
| Msa0883660 | Msa1255520 | 0.812843 | 3.457770e-51 | -8.615850e-47 |
| Msa0883670 | Msa1255520 | 0.820498 | 6.645531e-53 | -8.615850e-47 |
| Msa0887000 | Msa1255520 | 0.810363 | 1.196252e-50 | -8.615850e-47 |
| Msa0964680 | Msa1255520 | 0.813789 | 2.143047e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1255520 | MtrunA17_Chr8g0373781 | 96.262 | 535 | 16 | 1 | 1 | 535 | 1 | 531 | 0.0 | 1069 |
| Msa1255520 | MtrunA17_Chr1g0154501 | 57.757 | 535 | 159 | 8 | 1 | 535 | 1 | 468 | 0.0 | 582 |
| Msa1255520 | MtrunA17_Chr5g0436051 | 65.416 | 373 | 119 | 3 | 163 | 535 | 253 | 615 | 3.59e-174 | 505 |
| Msa1255520 | MtrunA17_Chr5g0403261 | 66.845 | 374 | 84 | 4 | 1 | 342 | 1 | 366 | 7.01e-173 | 492 |
| Msa1255520 | MtrunA17_Chr3g0112601 | 57.271 | 447 | 171 | 6 | 105 | 535 | 70 | 512 | 1.67e-166 | 482 |
| Msa1255520 | MtrunA17_Chr5g0403301 | 73.355 | 304 | 57 | 2 | 232 | 535 | 27 | 306 | 1.01e-151 | 436 |
| Msa1255520 | MtrunA17_Chr5g0403271 | 80.769 | 156 | 27 | 1 | 380 | 535 | 1 | 153 | 2.15e-77 | 240 |
| Msa1255520 | MtrunA17_Chr5g0403291 | 63.441 | 93 | 33 | 1 | 156 | 247 | 374 | 466 | 1.05e-34 | 136 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1255520 | AT4G36860.1 | 68.327 | 562 | 142 | 5 | 1 | 535 | 1 | 553 | 0.0 | 735 |
| Msa1255520 | AT4G36860.3 | 65.641 | 585 | 143 | 5 | 1 | 535 | 1 | 577 | 0.0 | 726 |
| Msa1255520 | AT4G36860.2 | 66.962 | 451 | 119 | 4 | 1 | 424 | 1 | 448 | 0.0 | 587 |
| Msa1255520 | AT1G19270.1 | 53.097 | 565 | 201 | 8 | 1 | 535 | 1 | 531 | 0.0 | 573 |
| Msa1255520 | AT1G19270.2 | 53.097 | 565 | 201 | 8 | 1 | 535 | 1 | 531 | 0.0 | 573 |
| Msa1255520 | AT2G39830.3 | 58.797 | 449 | 156 | 7 | 111 | 535 | 75 | 518 | 0.0 | 520 |
| Msa1255520 | AT2G39830.1 | 66.220 | 373 | 121 | 3 | 163 | 535 | 160 | 527 | 1.24e-179 | 516 |
| Msa1255520 | AT2G39830.2 | 65.691 | 376 | 121 | 4 | 163 | 535 | 160 | 530 | 2.69e-177 | 510 |
| Msa1255520 | AT5G66610.1 | 44.250 | 513 | 249 | 11 | 28 | 529 | 65 | 551 | 2.17e-133 | 399 |
| Msa1255520 | AT2G39830.4 | 65.233 | 279 | 94 | 3 | 163 | 440 | 160 | 436 | 5.69e-133 | 394 |
| Msa1255520 | AT5G66610.3 | 48.592 | 426 | 197 | 8 | 111 | 529 | 14 | 424 | 4.86e-130 | 386 |
| Msa1255520 | AT5G66620.1 | 45.010 | 491 | 244 | 10 | 44 | 528 | 170 | 640 | 7.57e-129 | 390 |
| Msa1255520 | AT5G66620.3 | 45.010 | 491 | 244 | 10 | 44 | 528 | 161 | 631 | 1.05e-128 | 390 |
| Msa1255520 | AT5G66620.4 | 45.010 | 491 | 244 | 10 | 44 | 528 | 161 | 631 | 1.05e-128 | 390 |
| Msa1255520 | AT5G66610.2 | 42.037 | 540 | 249 | 12 | 28 | 529 | 65 | 578 | 2.63e-127 | 384 |
| Msa1255520 | AT5G17890.1 | 51.309 | 382 | 174 | 6 | 159 | 535 | 1234 | 1608 | 1.84e-112 | 366 |
| Msa1255520 | AT5G66630.1 | 47.989 | 373 | 176 | 7 | 159 | 528 | 341 | 698 | 4.96e-109 | 341 |
| Msa1255520 | AT5G66640.5 | 40.272 | 514 | 236 | 18 | 33 | 528 | 10 | 470 | 1.49e-100 | 312 |
| Msa1255520 | AT5G66640.1 | 48.023 | 354 | 173 | 8 | 182 | 528 | 89 | 438 | 1.89e-100 | 311 |
| Msa1255520 | AT5G66640.7 | 48.023 | 354 | 173 | 8 | 182 | 528 | 89 | 438 | 1.89e-100 | 311 |
| Msa1255520 | AT5G66640.4 | 48.023 | 354 | 173 | 8 | 182 | 528 | 120 | 469 | 5.47e-100 | 310 |
| Msa1255520 | AT5G66640.3 | 49.691 | 324 | 154 | 7 | 212 | 528 | 10 | 331 | 5.13e-96 | 295 |
| Msa1255520 | AT5G66640.6 | 36.965 | 514 | 249 | 19 | 33 | 528 | 10 | 466 | 2.34e-83 | 267 |
| Msa1255520 | AT5G66640.2 | 43.220 | 354 | 186 | 9 | 182 | 528 | 120 | 465 | 4.69e-83 | 266 |
| Msa1255520 | AT5G66620.2 | 38.810 | 353 | 191 | 9 | 44 | 390 | 161 | 494 | 1.34e-72 | 240 |
Find 142 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCCTTATAGCATAATTTA+TGG | 0.189171 | 8_2:-54308664 | None:intergenic |
| ATCCTCGTCCTGAATGTTTA+TGG | 0.190323 | 8_2:-54307272 | None:intergenic |
| AGTATAGAGCACATCCTTTC+TGG | 0.193526 | 8_2:+54309197 | Msa1255520:CDS |
| CATGCTTGGCTTAGACTTAA+AGG | 0.236159 | 8_2:+54310343 | Msa1255520:CDS |
| GTGTCTCGATTCGGCTATTA+TGG | 0.241072 | 8_2:+54309467 | Msa1255520:CDS |
| TAAAGTTGCTGCAATTGTTT+AGG | 0.249877 | 8_2:+54310946 | Msa1255520:three_prime_UTR |
| TTTATATCACCATTTCATTA+TGG | 0.267495 | 8_2:-54310787 | None:intergenic |
| CTGGTGTAATTATACAATTT+TGG | 0.274807 | 8_2:-54310883 | None:intergenic |
| TGTAATCTATATTTGAATAT+TGG | 0.282668 | 8_2:+54310988 | Msa1255520:three_prime_UTR |
| AACCAGGCAGTGCTCAAGTA+TGG | 0.287660 | 8_2:+54310721 | Msa1255520:CDS |
| CATATTCCTTCTTCAACTTC+AGG | 0.292654 | 8_2:-54310472 | None:intergenic |
| ATGACAAAGCTCAAATATAT+TGG | 0.297534 | 8_2:-54310835 | None:intergenic |
| CATCGACGTATCAGCCTAAA+AGG | 0.297552 | 8_2:-54309972 | None:intergenic |
| CGAGGATACACCGGGAAATA+TGG | 0.299410 | 8_2:+54307288 | Msa1255520:CDS |
| GTCCTCTGGTTTCAGGTAAA+TGG | 0.302701 | 8_2:-54309764 | None:intergenic |
| AAGCAAAGTCCTCTGGTTTC+AGG | 0.302816 | 8_2:-54309771 | None:intergenic |
| ACCAGACTCTACACAAAATA+AGG | 0.306377 | 8_2:+54310901 | Msa1255520:three_prime_UTR |
| GCAGCAAATTCCTATGCTTT+TGG | 0.308444 | 8_2:+54309560 | Msa1255520:CDS |
| TTTCAGTTTATGTGAATTGT+AGG | 0.314508 | 8_2:+54307169 | Msa1255520:intron |
| AACTTCCGGTCATTCGGATA+TGG | 0.336770 | 8_2:-54310762 | None:intergenic |
| TCATTACAGTATTCCATGTC+TGG | 0.337779 | 8_2:+54308629 | Msa1255520:intron |
| ATATTTGAATATTGGCAGTT+TGG | 0.338306 | 8_2:+54310996 | Msa1255520:three_prime_UTR |
| GTATATCTGTAACTGCTATA+AGG | 0.341854 | 8_2:-54311059 | None:intergenic |
| GGCGAAAAGAGGTTTGTAAA+AGG | 0.349058 | 8_2:-54308058 | None:intergenic |
| ACCAAGTTCCTTCTCAAAAT+CGG | 0.357058 | 8_2:-54310632 | None:intergenic |
| TGATGATGCTTCTTCACTTC+CGG | 0.357113 | 8_2:-54310542 | None:intergenic |
| AAAGTTGCTGCAATTGTTTA+GGG | 0.374475 | 8_2:+54310947 | Msa1255520:three_prime_UTR |
| TTACCATAAATTATGCTATA+AGG | 0.387755 | 8_2:+54308661 | Msa1255520:CDS |
| CTACAGAAAATAAGATTGTA+TGG | 0.408396 | 8_2:+54307218 | Msa1255520:exon |
| GTTCGAACCCTTTAGAAACT+TGG | 0.408812 | 8_2:-54307250 | None:intergenic |
| TGCTTCTTCACTTCCGGAGC+CGG | 0.411249 | 8_2:-54310536 | None:intergenic |
| TTAGATTCAGAGATCTATTC+CGG | 0.411303 | 8_2:+54310517 | Msa1255520:CDS |
| GGTTCGAACCATAAACATTC+AGG | 0.417018 | 8_2:+54307264 | Msa1255520:CDS |
| ATAGTCAACCACATAGTATA+TGG | 0.417085 | 8_2:-54306587 | None:intergenic |
| CTGGCTTACCAAGTTTCTAA+AGG | 0.419265 | 8_2:+54307242 | Msa1255520:CDS |
| GTTACAGAGGAAGATCATAA+AGG | 0.421978 | 8_2:+54307519 | Msa1255520:CDS |
| AAATATATTGGTTGATGTAA+AGG | 0.430499 | 8_2:-54310823 | None:intergenic |
| GTGAGCTATCTGTCTCAATC+TGG | 0.433359 | 8_2:-54310669 | None:intergenic |
| ATGGAAAACTTCCGGTCATT+CGG | 0.433899 | 8_2:-54310768 | None:intergenic |
| TCGCATAGTTACCTGTATAC+AGG | 0.438440 | 8_2:-54308079 | None:intergenic |
| AACATTACCAGGAAAAGATT+AGG | 0.441424 | 8_2:-54306670 | None:intergenic |
| GCTGGCTGCAATGCCGAGAT+TGG | 0.442433 | 8_2:+54308359 | Msa1255520:CDS |
| TTCTGACAAGCAAAGTCCTC+TGG | 0.446916 | 8_2:-54309778 | None:intergenic |
| TGGCTTACCAAGTTTCTAAA+GGG | 0.451933 | 8_2:+54307243 | Msa1255520:CDS |
| TGTAAAGAGTGAAAAGTTGA+AGG | 0.455349 | 8_2:-54306487 | None:intergenic |
| TTACAGAGGAAGATCATAAA+GGG | 0.469977 | 8_2:+54307520 | Msa1255520:CDS |
| GAAAATAAGATTGTATGGGC+TGG | 0.473993 | 8_2:+54307223 | Msa1255520:exon |
| ATTTCATTATGGAAAACTTC+CGG | 0.475409 | 8_2:-54310776 | None:intergenic |
| TTCCTCTACATCTTCAAAGA+AGG | 0.477132 | 8_2:+54310600 | Msa1255520:CDS |
| CGAACCTCGTAATCAGTGAT+TGG | 0.478079 | 8_2:-54308455 | None:intergenic |
| CATCTTCAAAGAAGGGTAAA+CGG | 0.478692 | 8_2:+54310608 | Msa1255520:CDS |
| AAGGCCATACAAAACAAGTA+TGG | 0.479856 | 8_2:-54310006 | None:intergenic |
| AGGAAGATGAACAACTTGCC+AGG | 0.481242 | 8_2:+54307972 | Msa1255520:CDS |
| CTCATGAAATGATGCATGCT+TGG | 0.482818 | 8_2:+54310329 | Msa1255520:CDS |
| TGATTGGAAGTTTGCAAGCA+TGG | 0.482821 | 8_2:-54308439 | None:intergenic |
| CAAACTTTCTTGAATTGCCC+TGG | 0.485539 | 8_2:-54307990 | None:intergenic |
| CCATGTTGCTAAAATTCAAC+AGG | 0.488050 | 8_2:+54307916 | Msa1255520:CDS |
| CGGTAGCCTGCTCCTATACT+TGG | 0.493239 | 8_2:-54309927 | None:intergenic |
| GTATTTCAAGATAGAGAGGT+TGG | 0.497395 | 8_2:-54309503 | None:intergenic |
| TCAGAGATCTATTCCGGCTC+CGG | 0.497689 | 8_2:+54310523 | Msa1255520:CDS |
| TGAGTTGCATGGGAGCTGTA+TGG | 0.499390 | 8_2:+54308396 | Msa1255520:CDS |
| TTATAGCATAATTTATGGTA+AGG | 0.500224 | 8_2:-54308659 | None:intergenic |
| TCTGTCGTGTCCATATTTCC+CGG | 0.502358 | 8_2:-54307298 | None:intergenic |
| GTGCCATCGCGCTCGTGTGA+TGG | 0.502362 | 8_2:-54309235 | None:intergenic |
| GTGTCTTGAGTGTCTCGATT+CGG | 0.506058 | 8_2:+54309458 | Msa1255520:CDS |
| ACAGATAGCTCACCAGCCTA+TGG | 0.509351 | 8_2:+54310679 | Msa1255520:CDS |
| GCCCATACTTGAGCACTGCC+TGG | 0.512523 | 8_2:-54310723 | None:intergenic |
| ATATGGACACGACAGAGATT+CGG | 0.513953 | 8_2:+54307305 | Msa1255520:CDS |
| TCTATTTATAGGTTACTGAC+AGG | 0.514106 | 8_2:+54310295 | Msa1255520:intron |
| TGGATTTAGAGAGGGTAACC+AGG | 0.516593 | 8_2:+54310705 | Msa1255520:CDS |
| CAGATCCCACAAAATTCAGC+TGG | 0.520653 | 8_2:+54309166 | Msa1255520:intron |
| TTGTTGTAGCTGTCAAAGAA+TGG | 0.521248 | 8_2:+54309264 | Msa1255520:CDS |
| CATTACAGTATTCCATGTCT+GGG | 0.527623 | 8_2:+54308630 | Msa1255520:intron |
| ATAGAATCAGTTTGAGATGG+AGG | 0.527868 | 8_2:-54308028 | None:intergenic |
| AAACCTTCCATGGCCAATCT+CGG | 0.530954 | 8_2:-54308372 | None:intergenic |
| AGGAGACCAAGTATAGGAGC+AGG | 0.531668 | 8_2:+54309921 | Msa1255520:CDS |
| CTAAATCCATCTCCATAGGC+TGG | 0.535720 | 8_2:-54310691 | None:intergenic |
| GAAAAGTTGAAGGAAGTACT+TGG | 0.537904 | 8_2:-54306477 | None:intergenic |
| AGCTCACCAGCCTATGGAGA+TGG | 0.537937 | 8_2:+54310685 | Msa1255520:CDS |
| CATGCATCATTTCATGAGCT+AGG | 0.540468 | 8_2:-54310324 | None:intergenic |
| ACCTGTATACAGGCGAAAAG+AGG | 0.540632 | 8_2:-54308069 | None:intergenic |
| AATATAGAATCAGTTTGAGA+TGG | 0.540843 | 8_2:-54308031 | None:intergenic |
| TCTTGCAAACATCACACCTT+GGG | 0.542837 | 8_2:-54308694 | None:intergenic |
| TGCTCAAGTATGGGCTTAGA+CGG | 0.544906 | 8_2:+54310731 | Msa1255520:CDS |
| CTGAGGCCTGAAGTTGAAGA+AGG | 0.548038 | 8_2:+54310466 | Msa1255520:CDS |
| CATTCAGGACGAGGATACAC+CGG | 0.549451 | 8_2:+54307279 | Msa1255520:CDS |
| AGAAGGAATATGCCAAGTCT+TGG | 0.551472 | 8_2:+54310483 | Msa1255520:CDS |
| ACCACATATGAGCCAAGACT+TGG | 0.555232 | 8_2:-54310495 | None:intergenic |
| GCTGATGTTGAACAAAATGA+AGG | 0.556484 | 8_2:+54307890 | Msa1255520:CDS |
| ATGCCGAGATTGGCCATGGA+AGG | 0.556967 | 8_2:+54308369 | Msa1255520:CDS |
| ACCAGGCAGTGCTCAAGTAT+GGG | 0.557753 | 8_2:+54310722 | Msa1255520:CDS |
| ACCCTTCTTTGAAGATGTAG+AGG | 0.559513 | 8_2:-54310602 | None:intergenic |
| TCCTCTACATCTTCAAAGAA+GGG | 0.564606 | 8_2:+54310601 | Msa1255520:CDS |
| GCCAAGTCTTGGCTCATATG+TGG | 0.565359 | 8_2:+54310494 | Msa1255520:CDS |
| TGTGATACATATGGAGCATG+AGG | 0.568043 | 8_2:-54311031 | None:intergenic |
| GAATCAGTTTGAGATGGAGG+AGG | 0.568408 | 8_2:-54308025 | None:intergenic |
| CTTGACCATATCCGAATGAC+CGG | 0.569122 | 8_2:+54310757 | Msa1255520:CDS |
| TGTGCTTGCAGAATCTGTGC+TGG | 0.570167 | 8_2:+54308341 | Msa1255520:intron |
| ATTGGCAGTTTGGAACCTCA+TGG | 0.571254 | 8_2:+54311006 | Msa1255520:three_prime_UTR |
| CTCTCTAAATCCATCTCCAT+AGG | 0.573587 | 8_2:-54310695 | None:intergenic |
| ATCTTGCAAACATCACACCT+TGG | 0.577586 | 8_2:-54308695 | None:intergenic |
| AGTTGCTGCAATTGTTTAGG+GGG | 0.578401 | 8_2:+54310949 | Msa1255520:three_prime_UTR |
| TTCTTTGAAGATGTAGAGGA+AGG | 0.578442 | 8_2:-54310598 | None:intergenic |
| TCTTTCAGAGGTTACAGAGG+AGG | 0.581657 | 8_2:+54307497 | Msa1255520:CDS |
| AAGTATCTGTTGCTTGATGA+CGG | 0.585206 | 8_2:+54309426 | Msa1255520:CDS |
| TCTTGTATTTCAAGATAGAG+AGG | 0.585747 | 8_2:-54309507 | None:intergenic |
| ATTCAAGAAAGTTTGAGCGT+TGG | 0.587908 | 8_2:+54307998 | Msa1255520:CDS |
| TGCAATGCCGAGATTGGCCA+TGG | 0.592397 | 8_2:+54308365 | Msa1255520:CDS |
| AATTGCGATCTCTCTTTCAG+AGG | 0.593587 | 8_2:+54307485 | Msa1255520:CDS |
| TACAGAAAATAAGATTGTAT+GGG | 0.593719 | 8_2:+54307219 | Msa1255520:exon |
| TGTCTCTCAACCAAAAGCAT+AGG | 0.601813 | 8_2:-54309570 | None:intergenic |
| ACAAGCACTAAATGAAGCCA+TGG | 0.603423 | 8_2:+54309590 | Msa1255520:CDS |
| CTCTCTTTCAGAGGTTACAG+AGG | 0.604714 | 8_2:+54307494 | Msa1255520:CDS |
| AGATTCTGAATCTGAAGATG+AGG | 0.610392 | 8_2:+54307829 | Msa1255520:CDS |
| ATTCAGGACGAGGATACACC+GGG | 0.612301 | 8_2:+54307280 | Msa1255520:CDS |
| TCATCTTCCTCGTCATCAAG+TGG | 0.612402 | 8_2:-54307860 | None:intergenic |
| ATAAGGAGCTGCATCACCCA+AGG | 0.612966 | 8_2:+54308678 | Msa1255520:CDS |
| CTATGGAGATGGATTTAGAG+AGG | 0.615579 | 8_2:+54310696 | Msa1255520:CDS |
| CTGATGTTGAACAAAATGAA+GGG | 0.615941 | 8_2:+54307891 | Msa1255520:CDS |
| CGACAGGCTATGGCAATCTG+AGG | 0.620280 | 8_2:+54310449 | Msa1255520:intron |
| GTAAGGACGATTCCCAGACA+TGG | 0.624532 | 8_2:-54308642 | None:intergenic |
| GGAAGATGAACAACTTGCCA+GGG | 0.625754 | 8_2:+54307973 | Msa1255520:CDS |
| CAGTTATCATATCGATGACA+CGG | 0.628026 | 8_2:-54309947 | None:intergenic |
| AACCATAAACATTCAGGACG+AGG | 0.628809 | 8_2:+54307270 | Msa1255520:CDS |
| TGTTGACGAAGTTCAACTTG+AGG | 0.636560 | 8_2:+54307952 | Msa1255520:CDS |
| AAGTTGCTGCAATTGTTTAG+GGG | 0.637012 | 8_2:+54310948 | Msa1255520:three_prime_UTR |
| TATGGAGATGGATTTAGAGA+GGG | 0.638780 | 8_2:+54310697 | Msa1255520:CDS |
| TATCAGAAGGATACCTAGGA+AGG | 0.638978 | 8_2:-54310025 | None:intergenic |
| GGTTACAGAGGAGGTTACAG+AGG | 0.639025 | 8_2:+54307506 | Msa1255520:CDS |
| AGTTCTAACCATATACTATG+TGG | 0.644274 | 8_2:+54306579 | Msa1255520:five_prime_UTR |
| GATGTGCTCTATACTCAATG+AGG | 0.649586 | 8_2:-54309189 | None:intergenic |
| ACTTCCAATCACTGATTACG+AGG | 0.658587 | 8_2:+54308451 | Msa1255520:CDS |
| GCACTAAATGAAGCCATGGA+GGG | 0.659884 | 8_2:+54309594 | Msa1255520:CDS |
| TGTCCATCACACGAGCGCGA+TGG | 0.661781 | 8_2:+54309232 | Msa1255520:CDS |
| AGCACTAAATGAAGCCATGG+AGG | 0.665183 | 8_2:+54309593 | Msa1255520:CDS |
| TTGTAGCTGTCAAAGAATGG+AGG | 0.683641 | 8_2:+54309267 | Msa1255520:CDS |
| GTTGTGTCCACTTGATGACG+AGG | 0.696227 | 8_2:+54307853 | Msa1255520:CDS |
| CACCATTTACCTGAAACCAG+AGG | 0.704277 | 8_2:+54309762 | Msa1255520:CDS |
| TGATGTTGAACAAAATGAAG+GGG | 0.704807 | 8_2:+54307892 | Msa1255520:CDS |
| CTTTGACAGCTACAACAACG+AGG | 0.719508 | 8_2:-54309259 | None:intergenic |
| GGATAATCATGATAATTCCG+CGG | 0.721301 | 8_2:+54307326 | Msa1255520:CDS |
| ATGGAGCATGAGGTTCCATG+AGG | 0.736093 | 8_2:-54311021 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAATATATTATATAAA+GGG | - | chr8_2:54309128-54309147 | None:intergenic | 0.0% |
| !!! | ATTTTTTTTTTCTTTTTTCT+AGG | + | chr8_2:54306824-54306843 | Msa1255520:intron | 10.0% |
| !! | CTAATCAAATATTTATAAAA+TGG | - | chr8_2:54307727-54307746 | None:intergenic | 10.0% |
| !! | TATAAATATTTGATTAGAAA+AGG | + | chr8_2:54307730-54307749 | Msa1255520:intron | 10.0% |
| !! | AGTATTATTTACAATAATAT+TGG | - | chr8_2:54308598-54308617 | None:intergenic | 10.0% |
| !! | ATATTATTGTAAATAATACT+TGG | + | chr8_2:54308598-54308617 | Msa1255520:intron | 10.0% |
| !!! | TTCTCTTTCATTTAATTTTT+TGG | + | chr8_2:54307124-54307143 | Msa1255520:intron | 15.0% |
| !! | TACTTATTTAAACTTTCTTT+AGG | + | chr8_2:54308525-54308544 | Msa1255520:intron | 15.0% |
| !!! | TTTTCATAATTACTTTTAGA+AGG | + | chr8_2:54308873-54308892 | Msa1255520:intron | 15.0% |
| !! | ATTTCATATCAATTAATGAA+AGG | - | chr8_2:54309378-54309397 | None:intergenic | 15.0% |
| !!! | ATTTTTTCAATATTGATTGT+AGG | + | chr8_2:54309731-54309750 | Msa1255520:intron | 15.0% |
| !!! | TTTTTTCAATATTGATTGTA+GGG | + | chr8_2:54309732-54309751 | Msa1255520:intron | 15.0% |
| !!! | ATGTTGAAAATTTTATATTC+CGG | + | chr8_2:54310394-54310413 | Msa1255520:intron | 15.0% |
| !!! | TTATACAATTTTGGAATATT+TGG | - | chr8_2:54310877-54310896 | None:intergenic | 15.0% |
| !! | TGTAATCTATATTTGAATAT+TGG | + | chr8_2:54310988-54311007 | Msa1255520:three_prime_UTR | 15.0% |
| !!! | ATCTAACAAATTTTCAATCA+TGG | + | chr8_2:54306741-54306760 | Msa1255520:intron | 20.0% |
| !!! | TCTAACAAATTTTCAATCAT+GGG | + | chr8_2:54306742-54306761 | Msa1255520:intron | 20.0% |
| !!! | GTGTTTTTAATCAATATTGA+TGG | + | chr8_2:54306786-54306805 | Msa1255520:intron | 20.0% |
| !!! | TTTTTAATCAATATTGATGG+TGG | + | chr8_2:54306789-54306808 | Msa1255520:intron | 20.0% |
| !!! | TTTTAATCAATATTGATGGT+GGG | + | chr8_2:54306790-54306809 | Msa1255520:intron | 20.0% |
| !! | ATTAATTATCCAGCTATATT+TGG | + | chr8_2:54306890-54306909 | Msa1255520:intron | 20.0% |
| !! | CTCTAAATGTATAATTCAAA+AGG | - | chr8_2:54307098-54307117 | None:intergenic | 20.0% |
| !!! | TGAATTATACATTTAGAGTA+AGG | + | chr8_2:54307100-54307119 | Msa1255520:intron | 20.0% |
| !! | TACAGAAAATAAGATTGTAT+GGG | + | chr8_2:54307219-54307238 | Msa1255520:exon | 20.0% |
| !!! | TTGCTTAGAACATATATTTT+AGG | - | chr8_2:54307649-54307668 | None:intergenic | 20.0% |
| !!! | TTTCTACGATTTTACATATT+AGG | - | chr8_2:54308199-54308218 | None:intergenic | 20.0% |
| !! | TTATAGCATAATTTATGGTA+AGG | - | chr8_2:54308662-54308681 | None:intergenic | 20.0% |
| !! | TTACCATAAATTATGCTATA+AGG | + | chr8_2:54308661-54308680 | Msa1255520:CDS | 20.0% |
| !! | ATACATTGAAGAGAAATAAA+AGG | - | chr8_2:54309669-54309688 | None:intergenic | 20.0% |
| !! | TCAATATTGAAAAAATCCAA+AGG | - | chr8_2:54309727-54309746 | None:intergenic | 20.0% |
| !!! | TTTTGTAATTCCAGATTTTA+AGG | + | chr8_2:54309901-54309920 | Msa1255520:intron | 20.0% |
| !! | TAAGACAAGAAAGAAAAAAA+TGG | - | chr8_2:54310051-54310070 | None:intergenic | 20.0% |
| !!! | TTCAAGGATTTTCTATTTAT+AGG | + | chr8_2:54310284-54310303 | Msa1255520:intron | 20.0% |
| !! | TTTATATCACCATTTCATTA+TGG | - | chr8_2:54310790-54310809 | None:intergenic | 20.0% |
| !!! | AAATATATTGGTTGATGTAA+AGG | - | chr8_2:54310826-54310845 | None:intergenic | 20.0% |
| !!! | TTTAATCAATATTGATGGTG+GGG | + | chr8_2:54306791-54306810 | Msa1255520:intron | 25.0% |
| ! | TGTTTGATTGAATTTGGATT+TGG | + | chr8_2:54307018-54307037 | Msa1255520:intron | 25.0% |
| ! | ATTGAATTTGGATTTGGATT+TGG | + | chr8_2:54307024-54307043 | Msa1255520:intron | 25.0% |
| ! | TTTCAGTTTATGTGAATTGT+AGG | + | chr8_2:54307169-54307188 | Msa1255520:intron | 25.0% |
| !!! | CATACAATCTTATTTTCTGT+AGG | - | chr8_2:54307220-54307239 | None:intergenic | 25.0% |
| ! | CTACAGAAAATAAGATTGTA+TGG | + | chr8_2:54307218-54307237 | Msa1255520:exon | 25.0% |
| ! | CATAAAGGGAAAAAAGTTAT+CGG | + | chr8_2:54307534-54307553 | Msa1255520:CDS | 25.0% |
| ! | TTTGTGTAACATTGTTTGAA+TGG | + | chr8_2:54307597-54307616 | Msa1255520:intron | 25.0% |
| !!! | GAACATATATTTTAGGTATC+CGG | - | chr8_2:54307642-54307661 | None:intergenic | 25.0% |
| ! | GGAATTTCATATTTGTTCAA+TGG | - | chr8_2:54307706-54307725 | None:intergenic | 25.0% |
| ! | AATATAGAATCAGTTTGAGA+TGG | - | chr8_2:54308034-54308053 | None:intergenic | 25.0% |
| ! | TCTTTAGCAAATTCGATATA+TGG | - | chr8_2:54308143-54308162 | None:intergenic | 25.0% |
| ! | ATCACTGCATATGATAAAAA+GGG | + | chr8_2:54308162-54308181 | Msa1255520:intron | 25.0% |
| ! | TGATAAAAAGGGAAAATGAT+TGG | + | chr8_2:54308173-54308192 | Msa1255520:intron | 25.0% |
| !!! | CTAAAAAGTTTGCTTTTCAT+AGG | + | chr8_2:54308270-54308289 | Msa1255520:intron | 25.0% |
| !!! | TAATGTTTAGTTCTTTTCAC+AGG | + | chr8_2:54308932-54308951 | Msa1255520:intron | 25.0% |
| !!! | AAGAGGTATTAGTATGTATT+AGG | + | chr8_2:54308981-54309000 | Msa1255520:intron | 25.0% |
| ! | TATAGAAATAACCAGTTCTT+AGG | + | chr8_2:54309086-54309105 | Msa1255520:intron | 25.0% |
| !! | GAAATACAAGAATTTTACGA+AGG | + | chr8_2:54309519-54309538 | Msa1255520:CDS | 25.0% |
| ! | AAGAAAAAAATGGTATCAGA+AGG | - | chr8_2:54310041-54310060 | None:intergenic | 25.0% |
| !! | GATCATTGCAATTTAGAATT+TGG | + | chr8_2:54310091-54310110 | Msa1255520:intron | 25.0% |
| !! | ATTGCAATTTAGAATTTGGT+CGG | + | chr8_2:54310095-54310114 | Msa1255520:intron | 25.0% |
| ! | AACATGATTGCAATAATCAT+TGG | - | chr8_2:54310137-54310156 | None:intergenic | 25.0% |
| !! | TCAAACAATTTGTTCTTAAC+TGG | + | chr8_2:54310173-54310192 | Msa1255520:intron | 25.0% |
| ! | TTGTTGAGCATAAAAATAGA+TGG | - | chr8_2:54310235-54310254 | None:intergenic | 25.0% |
| !!! | TTCAACATTGTTTTGATCAT+TGG | - | chr8_2:54310382-54310401 | None:intergenic | 25.0% |
| ! | TTTATATTCCGGTATTAAGT+TGG | + | chr8_2:54310405-54310424 | Msa1255520:intron | 25.0% |
| ! | ATTTCATTATGGAAAACTTC+CGG | - | chr8_2:54310779-54310798 | None:intergenic | 25.0% |
| ! | ATGACAAAGCTCAAATATAT+TGG | - | chr8_2:54310838-54310857 | None:intergenic | 25.0% |
| !! | CTGGTGTAATTATACAATTT+TGG | - | chr8_2:54310886-54310905 | None:intergenic | 25.0% |
| ! | ATATTTGAATATTGGCAGTT+TGG | + | chr8_2:54310996-54311015 | Msa1255520:three_prime_UTR | 25.0% |
| !!! | AAGGTATTTTGTGATACATA+TGG | - | chr8_2:54311043-54311062 | None:intergenic | 25.0% |
| ! | ATCACTGTCTAAGTAAAAAT+TGG | + | chr8_2:54311133-54311152 | Msa1255520:three_prime_UTR | 25.0% |
| TGTAAAGAGTGAAAAGTTGA+AGG | - | chr8_2:54306490-54306509 | None:intergenic | 30.0% | |
| CACTCATAAAAAGCTAATTC+TGG | + | chr8_2:54306508-54306527 | Msa1255520:five_prime_UTR | 30.0% | |
| ! | AGTTCTAACCATATACTATG+TGG | + | chr8_2:54306579-54306598 | Msa1255520:five_prime_UTR | 30.0% |
| ATAGTCAACCACATAGTATA+TGG | - | chr8_2:54306590-54306609 | None:intergenic | 30.0% | |
| AACATTACCAGGAAAAGATT+AGG | - | chr8_2:54306673-54306692 | None:intergenic | 30.0% | |
| CAAGTGTGTTTGATTGAATT+TGG | + | chr8_2:54307012-54307031 | Msa1255520:intron | 30.0% | |
| !!! | CAATCTTATTTTCTGTAGGT+CGG | - | chr8_2:54307216-54307235 | None:intergenic | 30.0% |
| TTACAGAGGAAGATCATAAA+GGG | + | chr8_2:54307520-54307539 | Msa1255520:CDS | 30.0% | |
| ! | AGATTTATGCTTTTGCAAGA+CGG | + | chr8_2:54307559-54307578 | Msa1255520:intron | 30.0% |
| ! | AATTAGTGTTTTCTGTGTAC+CGG | + | chr8_2:54307620-54307639 | Msa1255520:intron | 30.0% |
| !!! | AGAAAAGGTTACCTCTTTTT+TGG | + | chr8_2:54307745-54307764 | Msa1255520:intron | 30.0% |
| !!! | GAAAAGGTTACCTCTTTTTT+GGG | + | chr8_2:54307746-54307765 | Msa1255520:intron | 30.0% |
| CTGATGTTGAACAAAATGAA+GGG | + | chr8_2:54307891-54307910 | Msa1255520:CDS | 30.0% | |
| TGATGTTGAACAAAATGAAG+GGG | + | chr8_2:54307892-54307911 | Msa1255520:CDS | 30.0% | |
| GATCACTGCATATGATAAAA+AGG | + | chr8_2:54308161-54308180 | Msa1255520:intron | 30.0% | |
| ! | CTTTTTAGATGTCTACTATC+TGG | - | chr8_2:54308258-54308277 | None:intergenic | 30.0% |
| GCTCCTTATAGCATAATTTA+TGG | - | chr8_2:54308667-54308686 | None:intergenic | 30.0% | |
| TGAAAACAGATCAAAGTCAA+TGG | - | chr8_2:54308859-54308878 | None:intergenic | 30.0% | |
| AGTTTCTCTTATAGACAAAG+AGG | + | chr8_2:54308964-54308983 | Msa1255520:intron | 30.0% | |
| ! | TGCACAGTATTGAAAAATCA+CGG | - | chr8_2:54309035-54309054 | None:intergenic | 30.0% |
| TCTTGTATTTCAAGATAGAG+AGG | - | chr8_2:54309510-54309529 | None:intergenic | 30.0% | |
| AAGTAAAACATCCTTACAGT+GGG | - | chr8_2:54309816-54309835 | None:intergenic | 30.0% | |
| !! | ATTTTAAGGAGACCAAGTAT+AGG | + | chr8_2:54309915-54309934 | Msa1255520:CDS | 30.0% |
| ! | ATATGATAACTGAGCCTTTT+AGG | + | chr8_2:54309958-54309977 | Msa1255520:CDS | 30.0% |
| TCTATTTATAGGTTACTGAC+AGG | + | chr8_2:54310295-54310314 | Msa1255520:intron | 30.0% | |
| !!! | CATTGTTTTGATCATTGGAA+TGG | - | chr8_2:54310377-54310396 | None:intergenic | 30.0% |
| TTAGATTCAGAGATCTATTC+CGG | + | chr8_2:54310517-54310536 | Msa1255520:CDS | 30.0% | |
| ! | GGAAGTTTTCCATAATGAAA+TGG | + | chr8_2:54310778-54310797 | Msa1255520:exon | 30.0% |
| TAAAGTTGCTGCAATTGTTT+AGG | + | chr8_2:54310946-54310965 | Msa1255520:three_prime_UTR | 30.0% | |
| AAAGTTGCTGCAATTGTTTA+GGG | + | chr8_2:54310947-54310966 | Msa1255520:three_prime_UTR | 30.0% | |
| GTATATCTGTAACTGCTATA+AGG | - | chr8_2:54311062-54311081 | None:intergenic | 30.0% | |
| !! | GAAAAGTTGAAGGAAGTACT+TGG | - | chr8_2:54306480-54306499 | None:intergenic | 35.0% |
| ! | TCTGATTCCTAATCTTTTCC+TGG | + | chr8_2:54306663-54306682 | Msa1255520:five_prime_UTR | 35.0% |
| TGTCACAAGAAAACATTACC+AGG | - | chr8_2:54306684-54306703 | None:intergenic | 35.0% | |
| AAGCAACAACCAAATATAGC+TGG | - | chr8_2:54306902-54306921 | None:intergenic | 35.0% | |
| !! | TTGGTTGTTGCTTTGAGTAA+TGG | + | chr8_2:54306909-54306928 | Msa1255520:intron | 35.0% |
| ! | TGGATTTGGATTTGGAATTC+AGG | + | chr8_2:54307032-54307051 | Msa1255520:intron | 35.0% |
| GAAAATAAGATTGTATGGGC+TGG | + | chr8_2:54307223-54307242 | Msa1255520:exon | 35.0% | |
| TGGCTTACCAAGTTTCTAAA+GGG | + | chr8_2:54307243-54307262 | Msa1255520:CDS | 35.0% | |
| GGATAATCATGATAATTCCG+CGG | + | chr8_2:54307326-54307345 | Msa1255520:CDS | 35.0% | |
| AGCATAAACTGTTATTACCG+CGG | - | chr8_2:54307346-54307365 | None:intergenic | 35.0% | |
| TAGTGGTAAATTCTGAGTGT+AGG | + | chr8_2:54307422-54307441 | Msa1255520:intron | 35.0% | |
| GTTACAGAGGAAGATCATAA+AGG | + | chr8_2:54307519-54307538 | Msa1255520:CDS | 35.0% | |
| ! | GACGTTTTTAAACACTTCAC+CGG | - | chr8_2:54307772-54307791 | None:intergenic | 35.0% |
| GATTCAGAATCTTCTTCTGA+AGG | - | chr8_2:54307821-54307840 | None:intergenic | 35.0% | |
| AGATTCTGAATCTGAAGATG+AGG | + | chr8_2:54307829-54307848 | Msa1255520:CDS | 35.0% | |
| GCTGATGTTGAACAAAATGA+AGG | + | chr8_2:54307890-54307909 | Msa1255520:CDS | 35.0% | |
| !! | CCTGTTGAATTTTAGCAACA+TGG | - | chr8_2:54307919-54307938 | None:intergenic | 35.0% |
| CCATGTTGCTAAAATTCAAC+AGG | + | chr8_2:54307916-54307935 | Msa1255520:CDS | 35.0% | |
| ATTCAAGAAAGTTTGAGCGT+TGG | + | chr8_2:54307998-54308017 | Msa1255520:CDS | 35.0% | |
| ! | ATAGAATCAGTTTGAGATGG+AGG | - | chr8_2:54308031-54308050 | None:intergenic | 35.0% |
| !! | TTGCAGTAAACGGTTTTAGT+CGG | - | chr8_2:54308319-54308338 | None:intergenic | 35.0% |
| ! | CAAGCACATTTTGCAGTAAA+CGG | - | chr8_2:54308329-54308348 | None:intergenic | 35.0% |
| TCATTACAGTATTCCATGTC+TGG | + | chr8_2:54308629-54308648 | Msa1255520:intron | 35.0% | |
| CATTACAGTATTCCATGTCT+GGG | + | chr8_2:54308630-54308649 | Msa1255520:intron | 35.0% | |
| TTTGTCAATTCTGTTGTGCT+TGG | + | chr8_2:54308765-54308784 | Msa1255520:intron | 35.0% | |
| ATTTCACTACATTATGTGCG+AGG | + | chr8_2:54308829-54308848 | Msa1255520:intron | 35.0% | |
| TGATGTCATAACCTAAGAAC+TGG | - | chr8_2:54309100-54309119 | None:intergenic | 35.0% | |
| !! | CAGTATTTTTGTAGCCAGAA+AGG | - | chr8_2:54309214-54309233 | None:intergenic | 35.0% |
| TTGTTGTAGCTGTCAAAGAA+TGG | + | chr8_2:54309264-54309283 | Msa1255520:CDS | 35.0% | |
| !! | TCATGTGTTATTTGCCAACA+AGG | + | chr8_2:54309317-54309336 | Msa1255520:intron | 35.0% |
| ! | AAGTATCTGTTGCTTGATGA+CGG | + | chr8_2:54309426-54309445 | Msa1255520:CDS | 35.0% |
| GTATTTCAAGATAGAGAGGT+TGG | - | chr8_2:54309506-54309525 | None:intergenic | 35.0% | |
| ! | TCTTTCTACTGTCCTGATTT+TGG | + | chr8_2:54309696-54309715 | Msa1255520:intron | 35.0% |
| AGTAAAACATCCTTACAGTG+GGG | - | chr8_2:54309815-54309834 | None:intergenic | 35.0% | |
| CAAGTAAAACATCCTTACAG+TGG | - | chr8_2:54309817-54309836 | None:intergenic | 35.0% | |
| TACTTGGTCTCCTTAAAATC+TGG | - | chr8_2:54309914-54309933 | None:intergenic | 35.0% | |
| CAGTTATCATATCGATGACA+CGG | - | chr8_2:54309950-54309969 | None:intergenic | 35.0% | |
| !!! | ACAGCCATACTTGTTTTGTA+TGG | + | chr8_2:54310002-54310021 | Msa1255520:CDS | 35.0% |
| AAGGCCATACAAAACAAGTA+TGG | - | chr8_2:54310009-54310028 | None:intergenic | 35.0% | |
| AGATGGTAACTCAAGTGATT+TGG | - | chr8_2:54310218-54310237 | None:intergenic | 35.0% | |
| AATCTGCGATAGATGATTCA+AGG | + | chr8_2:54310268-54310287 | Msa1255520:intron | 35.0% | |
| GAGATTGTCCAACTTAATAC+CGG | - | chr8_2:54310416-54310435 | None:intergenic | 35.0% | |
| !! | CTCTTCTGTTTATTTTCGAC+AGG | + | chr8_2:54310433-54310452 | Msa1255520:intron | 35.0% |
| !! | TGTTTATTTTCGACAGGCTA+TGG | + | chr8_2:54310439-54310458 | Msa1255520:intron | 35.0% |
| CATATTCCTTCTTCAACTTC+AGG | - | chr8_2:54310475-54310494 | None:intergenic | 35.0% | |
| ! | TTCTTTGAAGATGTAGAGGA+AGG | - | chr8_2:54310601-54310620 | None:intergenic | 35.0% |
| TTCCTCTACATCTTCAAAGA+AGG | + | chr8_2:54310600-54310619 | Msa1255520:CDS | 35.0% | |
| TCCTCTACATCTTCAAAGAA+GGG | + | chr8_2:54310601-54310620 | Msa1255520:CDS | 35.0% | |
| CATCTTCAAAGAAGGGTAAA+CGG | + | chr8_2:54310608-54310627 | Msa1255520:CDS | 35.0% | |
| ACCAAGTTCCTTCTCAAAAT+CGG | - | chr8_2:54310635-54310654 | None:intergenic | 35.0% | |
| ! | TATGGAGATGGATTTAGAGA+GGG | + | chr8_2:54310697-54310716 | Msa1255520:CDS | 35.0% |
| ACCAGACTCTACACAAAATA+AGG | + | chr8_2:54310901-54310920 | Msa1255520:three_prime_UTR | 35.0% | |
| !!! | TCCTTATTTTGTGTAGAGTC+TGG | - | chr8_2:54310905-54310924 | None:intergenic | 35.0% |
| AAGTTGCTGCAATTGTTTAG+GGG | + | chr8_2:54310948-54310967 | Msa1255520:three_prime_UTR | 35.0% | |
| !! | ATCAATATTGATGGTGGGGT+TGG | + | chr8_2:54306795-54306814 | Msa1255520:intron | 40.0% |
| GAATCACTCTTCAGAAAGCA+AGG | - | chr8_2:54307067-54307086 | None:intergenic | 40.0% | |
| !!! | TGTAGGTGAATTTTGAGACG+AGG | + | chr8_2:54307186-54307205 | Msa1255520:five_prime_UTR | 40.0% |
| CTGGCTTACCAAGTTTCTAA+AGG | + | chr8_2:54307242-54307261 | Msa1255520:CDS | 40.0% | |
| ! | GTTCGAACCCTTTAGAAACT+TGG | - | chr8_2:54307253-54307272 | None:intergenic | 40.0% |
| GGTTCGAACCATAAACATTC+AGG | + | chr8_2:54307264-54307283 | Msa1255520:CDS | 40.0% | |
| AACCATAAACATTCAGGACG+AGG | + | chr8_2:54307270-54307289 | Msa1255520:CDS | 40.0% | |
| ATCCTCGTCCTGAATGTTTA+TGG | - | chr8_2:54307275-54307294 | None:intergenic | 40.0% | |
| ATATGGACACGACAGAGATT+CGG | + | chr8_2:54307305-54307324 | Msa1255520:CDS | 40.0% | |
| AGAGACTGAAGTTGCAATAG+TGG | + | chr8_2:54307405-54307424 | Msa1255520:intron | 40.0% | |
| AATTGCGATCTCTCTTTCAG+AGG | + | chr8_2:54307485-54307504 | Msa1255520:CDS | 40.0% | |
| ! | TTTATGCTTTTGCAAGACGG+TGG | + | chr8_2:54307562-54307581 | Msa1255520:intron | 40.0% |
| TGTTGACGAAGTTCAACTTG+AGG | + | chr8_2:54307952-54307971 | Msa1255520:CDS | 40.0% | |
| CAAACTTTCTTGAATTGCCC+TGG | - | chr8_2:54307993-54308012 | None:intergenic | 40.0% | |
| GGCGAAAAGAGGTTTGTAAA+AGG | - | chr8_2:54308061-54308080 | None:intergenic | 40.0% | |
| TCGCATAGTTACCTGTATAC+AGG | - | chr8_2:54308082-54308101 | None:intergenic | 40.0% | |
| AACTGAAATAGCCACCTCTA+TGG | + | chr8_2:54308219-54308238 | Msa1255520:intron | 40.0% | |
| GATCTATGTTGTCACCATAG+AGG | - | chr8_2:54308236-54308255 | None:intergenic | 40.0% | |
| TGCAACTCAAAAACCTTCCA+TGG | - | chr8_2:54308385-54308404 | None:intergenic | 40.0% | |
| !!! | TGGAAGGTTTTTGAGTTGCA+TGG | + | chr8_2:54308385-54308404 | Msa1255520:CDS | 40.0% |
| !!! | GGAAGGTTTTTGAGTTGCAT+GGG | + | chr8_2:54308386-54308405 | Msa1255520:CDS | 40.0% |
| GCATGGCAACAAAAACATTC+TGG | - | chr8_2:54308425-54308444 | None:intergenic | 40.0% | |
| TGATTGGAAGTTTGCAAGCA+TGG | - | chr8_2:54308442-54308461 | None:intergenic | 40.0% | |
| ! | ACTTCCAATCACTGATTACG+AGG | + | chr8_2:54308451-54308470 | Msa1255520:CDS | 40.0% |
| TTCGTTGTTGAACGCTAACA+TGG | + | chr8_2:54308487-54308506 | Msa1255520:intron | 40.0% | |
| TCTTGCAAACATCACACCTT+GGG | - | chr8_2:54308697-54308716 | None:intergenic | 40.0% | |
| ATCTTGCAAACATCACACCT+TGG | - | chr8_2:54308698-54308717 | None:intergenic | 40.0% | |
| GATGTGCTCTATACTCAATG+AGG | - | chr8_2:54309192-54309211 | None:intergenic | 40.0% | |
| AGTATAGAGCACATCCTTTC+TGG | + | chr8_2:54309197-54309216 | Msa1255520:CDS | 40.0% | |
| TTGTAGCTGTCAAAGAATGG+AGG | + | chr8_2:54309267-54309286 | Msa1255520:CDS | 40.0% | |
| TTTCCAATCAGTGCAGTCAA+CGG | + | chr8_2:54309398-54309417 | Msa1255520:intron | 40.0% | |
| ! | GCAGCAAATTCCTATGCTTT+TGG | + | chr8_2:54309560-54309579 | Msa1255520:CDS | 40.0% |
| ! | TGTCTCTCAACCAAAAGCAT+AGG | - | chr8_2:54309573-54309592 | None:intergenic | 40.0% |
| ACAAGCACTAAATGAAGCCA+TGG | + | chr8_2:54309590-54309609 | Msa1255520:CDS | 40.0% | |
| CCAAAGGACAATCCAAAATC+AGG | - | chr8_2:54309711-54309730 | None:intergenic | 40.0% | |
| ! | CCTGATTTTGGATTGTCCTT+TGG | + | chr8_2:54309708-54309727 | Msa1255520:intron | 40.0% |
| !! | TTGTTTTGTATGGCCTTCCT+AGG | + | chr8_2:54310012-54310031 | Msa1255520:CDS | 40.0% |
| TATCAGAAGGATACCTAGGA+AGG | - | chr8_2:54310028-54310047 | None:intergenic | 40.0% | |
| ATGGTATCAGAAGGATACCT+AGG | - | chr8_2:54310032-54310051 | None:intergenic | 40.0% | |
| TTGTCTTAACCGTCTGTTTC+AGG | + | chr8_2:54310063-54310082 | Msa1255520:intron | 40.0% | |
| TGTCTTAACCGTCTGTTTCA+GGG | + | chr8_2:54310064-54310083 | Msa1255520:intron | 40.0% | |
| CATGCATCATTTCATGAGCT+AGG | - | chr8_2:54310327-54310346 | None:intergenic | 40.0% | |
| CTCATGAAATGATGCATGCT+TGG | + | chr8_2:54310329-54310348 | Msa1255520:CDS | 40.0% | |
| CATGCTTGGCTTAGACTTAA+AGG | + | chr8_2:54310343-54310362 | Msa1255520:CDS | 40.0% | |
| AGAAGGAATATGCCAAGTCT+TGG | + | chr8_2:54310483-54310502 | Msa1255520:CDS | 40.0% | |
| ! | TGATGATGCTTCTTCACTTC+CGG | - | chr8_2:54310545-54310564 | None:intergenic | 40.0% |
| ! | ACCCTTCTTTGAAGATGTAG+AGG | - | chr8_2:54310605-54310624 | None:intergenic | 40.0% |
| !! | TAAACGGTCCGATTTTGAGA+AGG | + | chr8_2:54310624-54310643 | Msa1255520:CDS | 40.0% |
| !! | TCCGATTTTGAGAAGGAACT+TGG | + | chr8_2:54310631-54310650 | Msa1255520:CDS | 40.0% |
| CTCTCTAAATCCATCTCCAT+AGG | - | chr8_2:54310698-54310717 | None:intergenic | 40.0% | |
| ! | CTATGGAGATGGATTTAGAG+AGG | + | chr8_2:54310696-54310715 | Msa1255520:CDS | 40.0% |
| ATGGAAAACTTCCGGTCATT+CGG | - | chr8_2:54310771-54310790 | None:intergenic | 40.0% | |
| AGTTGCTGCAATTGTTTAGG+GGG | + | chr8_2:54310949-54310968 | Msa1255520:three_prime_UTR | 40.0% | |
| TGTGATACATATGGAGCATG+AGG | - | chr8_2:54311034-54311053 | None:intergenic | 40.0% | |
| TCTGTCGTGTCCATATTTCC+CGG | - | chr8_2:54307301-54307320 | None:intergenic | 45.0% | |
| CTCTCTTTCAGAGGTTACAG+AGG | + | chr8_2:54307494-54307513 | Msa1255520:CDS | 45.0% | |
| TCTTTCAGAGGTTACAGAGG+AGG | + | chr8_2:54307497-54307516 | Msa1255520:CDS | 45.0% | |
| !!! | AGGTTACCTCTTTTTTGGGC+CGG | + | chr8_2:54307750-54307769 | Msa1255520:intron | 45.0% |
| TCATCTTCCTCGTCATCAAG+TGG | - | chr8_2:54307863-54307882 | None:intergenic | 45.0% | |
| AGGAAGATGAACAACTTGCC+AGG | + | chr8_2:54307972-54307991 | Msa1255520:CDS | 45.0% | |
| GGAAGATGAACAACTTGCCA+GGG | + | chr8_2:54307973-54307992 | Msa1255520:CDS | 45.0% | |
| ! | GAATCAGTTTGAGATGGAGG+AGG | - | chr8_2:54308028-54308047 | None:intergenic | 45.0% |
| ! | ACCTCTTTTCGCCTGTATAC+AGG | + | chr8_2:54308068-54308087 | Msa1255520:CDS | 45.0% |
| ACCTGTATACAGGCGAAAAG+AGG | - | chr8_2:54308072-54308091 | None:intergenic | 45.0% | |
| CTATGTTGTCACCATAGAGG+TGG | - | chr8_2:54308233-54308252 | None:intergenic | 45.0% | |
| AAACCTTCCATGGCCAATCT+CGG | - | chr8_2:54308375-54308394 | None:intergenic | 45.0% | |
| CGAACCTCGTAATCAGTGAT+TGG | - | chr8_2:54308458-54308477 | None:intergenic | 45.0% | |
| CAGATCCCACAAAATTCAGC+TGG | + | chr8_2:54309166-54309185 | Msa1255520:intron | 45.0% | |
| ! | TGAGGCCAGCTGAATTTTGT+GGG | - | chr8_2:54309174-54309193 | None:intergenic | 45.0% |
| ! | ATGAGGCCAGCTGAATTTTG+TGG | - | chr8_2:54309175-54309194 | None:intergenic | 45.0% |
| CTTTGACAGCTACAACAACG+AGG | - | chr8_2:54309262-54309281 | None:intergenic | 45.0% | |
| GATAGTGAGTGTCTCCTTGT+TGG | - | chr8_2:54309334-54309353 | None:intergenic | 45.0% | |
| ! | TATCCGTTGACTGCACTGAT+TGG | - | chr8_2:54309404-54309423 | None:intergenic | 45.0% |
| GTGTCTTGAGTGTCTCGATT+CGG | + | chr8_2:54309458-54309477 | Msa1255520:CDS | 45.0% | |
| !! | GTGTCTCGATTCGGCTATTA+TGG | + | chr8_2:54309467-54309486 | Msa1255520:CDS | 45.0% |
| AGCACTAAATGAAGCCATGG+AGG | + | chr8_2:54309593-54309612 | Msa1255520:CDS | 45.0% | |
| GCACTAAATGAAGCCATGGA+GGG | + | chr8_2:54309594-54309613 | Msa1255520:CDS | 45.0% | |
| ! | TACATTCTTTTCGCCCTCCA+TGG | - | chr8_2:54309610-54309629 | None:intergenic | 45.0% |
| CACCATTTACCTGAAACCAG+AGG | + | chr8_2:54309762-54309781 | Msa1255520:CDS | 45.0% | |
| ! | GTCCTCTGGTTTCAGGTAAA+TGG | - | chr8_2:54309767-54309786 | None:intergenic | 45.0% |
| ! | AAGCAAAGTCCTCTGGTTTC+AGG | - | chr8_2:54309774-54309793 | None:intergenic | 45.0% |
| TTCTGACAAGCAAAGTCCTC+TGG | - | chr8_2:54309781-54309800 | None:intergenic | 45.0% | |
| CATCGACGTATCAGCCTAAA+AGG | - | chr8_2:54309975-54309994 | None:intergenic | 45.0% | |
| GTCTTAACCGTCTGTTTCAG+GGG | + | chr8_2:54310065-54310084 | Msa1255520:intron | 45.0% | |
| GATCATTCCCCTGAAACAGA+CGG | - | chr8_2:54310075-54310094 | None:intergenic | 45.0% | |
| TGGTCGGAAAGTAAGTGAAG+TGG | + | chr8_2:54310111-54310130 | Msa1255520:intron | 45.0% | |
| ACCACATATGAGCCAAGACT+TGG | - | chr8_2:54310498-54310517 | None:intergenic | 45.0% | |
| GTGAGCTATCTGTCTCAATC+TGG | - | chr8_2:54310672-54310691 | None:intergenic | 45.0% | |
| CTAAATCCATCTCCATAGGC+TGG | - | chr8_2:54310694-54310713 | None:intergenic | 45.0% | |
| TGGATTTAGAGAGGGTAACC+AGG | + | chr8_2:54310705-54310724 | Msa1255520:CDS | 45.0% | |
| TGCTCAAGTATGGGCTTAGA+CGG | + | chr8_2:54310731-54310750 | Msa1255520:CDS | 45.0% | |
| CTTGACCATATCCGAATGAC+CGG | + | chr8_2:54310757-54310776 | Msa1255520:CDS | 45.0% | |
| AACTTCCGGTCATTCGGATA+TGG | - | chr8_2:54310765-54310784 | None:intergenic | 45.0% | |
| ! | ATTGGCAGTTTGGAACCTCA+TGG | + | chr8_2:54311006-54311025 | Msa1255520:three_prime_UTR | 45.0% |
| !! | TATTAATATATTATATAAAG+GGG | - | chr8_2:54309127-54309146 | None:intergenic | 5.0% |
| !! | GATATTAATATATTATATAA+AGG | - | chr8_2:54309129-54309148 | None:intergenic | 5.0% |
| CATTCAGGACGAGGATACAC+CGG | + | chr8_2:54307279-54307298 | Msa1255520:CDS | 50.0% | |
| ATTCAGGACGAGGATACACC+GGG | + | chr8_2:54307280-54307299 | Msa1255520:CDS | 50.0% | |
| CGAGGATACACCGGGAAATA+TGG | + | chr8_2:54307288-54307307 | Msa1255520:CDS | 50.0% | |
| GGTTACAGAGGAGGTTACAG+AGG | + | chr8_2:54307506-54307525 | Msa1255520:CDS | 50.0% | |
| ACTTCACCGGCCCAAAAAAG+AGG | - | chr8_2:54307759-54307778 | None:intergenic | 50.0% | |
| !! | GTTGTGTCCACTTGATGACG+AGG | + | chr8_2:54307853-54307872 | Msa1255520:CDS | 50.0% |
| TGTGCTTGCAGAATCTGTGC+TGG | + | chr8_2:54308341-54308360 | Msa1255520:intron | 50.0% | |
| TGAGTTGCATGGGAGCTGTA+TGG | + | chr8_2:54308396-54308415 | Msa1255520:CDS | 50.0% | |
| GTAAGGACGATTCCCAGACA+TGG | - | chr8_2:54308645-54308664 | None:intergenic | 50.0% | |
| ATAAGGAGCTGCATCACCCA+AGG | + | chr8_2:54308678-54308697 | Msa1255520:CDS | 50.0% | |
| AGCAAACTGTCCCCACTGTA+AGG | + | chr8_2:54309802-54309821 | Msa1255520:intron | 50.0% | |
| AGGAGACCAAGTATAGGAGC+AGG | + | chr8_2:54309921-54309940 | Msa1255520:CDS | 50.0% | |
| CTGAGGCCTGAAGTTGAAGA+AGG | + | chr8_2:54310466-54310485 | Msa1255520:CDS | 50.0% | |
| GCCAAGTCTTGGCTCATATG+TGG | + | chr8_2:54310494-54310513 | Msa1255520:CDS | 50.0% | |
| TCAGAGATCTATTCCGGCTC+CGG | + | chr8_2:54310523-54310542 | Msa1255520:CDS | 50.0% | |
| ACAGATAGCTCACCAGCCTA+TGG | + | chr8_2:54310679-54310698 | Msa1255520:CDS | 50.0% | |
| AACCAGGCAGTGCTCAAGTA+TGG | + | chr8_2:54310721-54310740 | Msa1255520:CDS | 50.0% | |
| ACCAGGCAGTGCTCAAGTAT+GGG | + | chr8_2:54310722-54310741 | Msa1255520:CDS | 50.0% | |
| ATGGAGCATGAGGTTCCATG+AGG | - | chr8_2:54311024-54311043 | None:intergenic | 50.0% | |
| ! | TGCAATGCCGAGATTGGCCA+TGG | + | chr8_2:54308365-54308384 | Msa1255520:CDS | 55.0% |
| ! | ATGCCGAGATTGGCCATGGA+AGG | + | chr8_2:54308369-54308388 | Msa1255520:CDS | 55.0% |
| CGGTAGCCTGCTCCTATACT+TGG | - | chr8_2:54309930-54309949 | None:intergenic | 55.0% | |
| CGACAGGCTATGGCAATCTG+AGG | + | chr8_2:54310449-54310468 | Msa1255520:intron | 55.0% | |
| TGCTTCTTCACTTCCGGAGC+CGG | - | chr8_2:54310539-54310558 | None:intergenic | 55.0% | |
| AGCTCACCAGCCTATGGAGA+TGG | + | chr8_2:54310685-54310704 | Msa1255520:CDS | 55.0% | |
| GCTGGCTGCAATGCCGAGAT+TGG | + | chr8_2:54308359-54308378 | Msa1255520:CDS | 60.0% | |
| TGTCCATCACACGAGCGCGA+TGG | + | chr8_2:54309232-54309251 | Msa1255520:CDS | 60.0% | |
| ! | GCCCATACTTGAGCACTGCC+TGG | - | chr8_2:54310726-54310745 | None:intergenic | 60.0% |
| GTGCCATCGCGCTCGTGTGA+TGG | - | chr8_2:54309238-54309257 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 54306470 | 54311162 | 54306470 | ID=Msa1255520;Name=Msa1255520 |
| chr8_2 | mRNA | 54306470 | 54311162 | 54306470 | ID=Msa1255520-mRNA-1;Parent=Msa1255520;Name=Msa1255520-mRNA-1;_AED=0.19;_eAED=0.19;_QI=277|1|1|1|0.90|0.83|12|370|535 |
| chr8_2 | exon | 54306470 | 54306684 | 54306470 | ID=Msa1255520-mRNA-1:exon:16802;Parent=Msa1255520-mRNA-1 |
| chr8_2 | exon | 54307175 | 54307347 | 54307175 | ID=Msa1255520-mRNA-1:exon:16803;Parent=Msa1255520-mRNA-1 |
| chr8_2 | exon | 54307444 | 54307555 | 54307444 | ID=Msa1255520-mRNA-1:exon:16804;Parent=Msa1255520-mRNA-1 |
| chr8_2 | exon | 54307825 | 54308089 | 54307825 | ID=Msa1255520-mRNA-1:exon:16805;Parent=Msa1255520-mRNA-1 |
| chr8_2 | exon | 54308352 | 54308472 | 54308352 | ID=Msa1255520-mRNA-1:exon:16806;Parent=Msa1255520-mRNA-1 |
| chr8_2 | exon | 54308638 | 54308721 | 54308638 | ID=Msa1255520-mRNA-1:exon:16807;Parent=Msa1255520-mRNA-1 |
| chr8_2 | exon | 54309169 | 54309288 | 54309169 | ID=Msa1255520-mRNA-1:exon:16808;Parent=Msa1255520-mRNA-1 |
| chr8_2 | exon | 54309414 | 54309626 | 54309414 | ID=Msa1255520-mRNA-1:exon:16809;Parent=Msa1255520-mRNA-1 |
| chr8_2 | exon | 54309753 | 54309818 | 54309753 | ID=Msa1255520-mRNA-1:exon:16810;Parent=Msa1255520-mRNA-1 |
| chr8_2 | exon | 54309915 | 54310033 | 54309915 | ID=Msa1255520-mRNA-1:exon:16811;Parent=Msa1255520-mRNA-1 |
| chr8_2 | exon | 54310306 | 54310364 | 54310306 | ID=Msa1255520-mRNA-1:exon:16812;Parent=Msa1255520-mRNA-1 |
| chr8_2 | exon | 54310455 | 54311162 | 54310455 | ID=Msa1255520-mRNA-1:exon:16813;Parent=Msa1255520-mRNA-1 |
| chr8_2 | five_prime_UTR | 54306470 | 54306684 | 54306470 | ID=Msa1255520-mRNA-1:five_prime_utr;Parent=Msa1255520-mRNA-1 |
| chr8_2 | five_prime_UTR | 54307175 | 54307236 | 54307175 | ID=Msa1255520-mRNA-1:five_prime_utr;Parent=Msa1255520-mRNA-1 |
| chr8_2 | CDS | 54307237 | 54307347 | 54307237 | ID=Msa1255520-mRNA-1:cds;Parent=Msa1255520-mRNA-1 |
| chr8_2 | CDS | 54307444 | 54307555 | 54307444 | ID=Msa1255520-mRNA-1:cds;Parent=Msa1255520-mRNA-1 |
| chr8_2 | CDS | 54307825 | 54308089 | 54307825 | ID=Msa1255520-mRNA-1:cds;Parent=Msa1255520-mRNA-1 |
| chr8_2 | CDS | 54308352 | 54308472 | 54308352 | ID=Msa1255520-mRNA-1:cds;Parent=Msa1255520-mRNA-1 |
| chr8_2 | CDS | 54308638 | 54308721 | 54308638 | ID=Msa1255520-mRNA-1:cds;Parent=Msa1255520-mRNA-1 |
| chr8_2 | CDS | 54309169 | 54309288 | 54309169 | ID=Msa1255520-mRNA-1:cds;Parent=Msa1255520-mRNA-1 |
| chr8_2 | CDS | 54309414 | 54309626 | 54309414 | ID=Msa1255520-mRNA-1:cds;Parent=Msa1255520-mRNA-1 |
| chr8_2 | CDS | 54309753 | 54309818 | 54309753 | ID=Msa1255520-mRNA-1:cds;Parent=Msa1255520-mRNA-1 |
| chr8_2 | CDS | 54309915 | 54310033 | 54309915 | ID=Msa1255520-mRNA-1:cds;Parent=Msa1255520-mRNA-1 |
| chr8_2 | CDS | 54310306 | 54310364 | 54310306 | ID=Msa1255520-mRNA-1:cds;Parent=Msa1255520-mRNA-1 |
| chr8_2 | CDS | 54310455 | 54310792 | 54310455 | ID=Msa1255520-mRNA-1:cds;Parent=Msa1255520-mRNA-1 |
| chr8_2 | three_prime_UTR | 54310793 | 54311162 | 54310793 | ID=Msa1255520-mRNA-1:three_prime_utr;Parent=Msa1255520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
