AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1297710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297710 MtrunA17_Chr4g0054791 96.552 319 10 1 1 319 1 318 0.0 638
Msa1297710 MtrunA17_Chr5g0400461 61.047 344 97 9 3 319 2 335 8.87e-135 385
Msa1297710 MtrunA17_Chr6g0481091 64.516 155 52 1 7 161 6 157 8.59e-68 212
Msa1297710 MtrunA17_Chr5g0433781 61.688 154 56 1 7 160 6 156 2.24e-62 209
Msa1297710 MtrunA17_Chr2g0309891 59.494 158 60 2 5 161 4 158 2.58e-62 201
Msa1297710 MtrunA17_Chr3g0109821 53.191 188 73 4 7 192 6 180 5.77e-62 208
Msa1297710 MtrunA17_Chr5g0405211 45.000 200 98 5 7 205 8 196 9.32e-52 174
Msa1297710 MtrunA17_Chr1g0201021 55.921 152 64 1 9 160 21 169 2.41e-51 178
Msa1297710 MtrunA17_Chr1g0200561 49.701 167 78 3 1 166 13 174 1.17e-50 171
Msa1297710 MtrunA17_Chr8g0372121 50.000 156 72 3 7 161 6 156 3.93e-49 166
Msa1297710 MtrunA17_Chr5g0428991 55.346 159 66 3 7 164 25 179 4.06e-49 173
Msa1297710 MtrunA17_Chr3g0128111 49.701 167 79 3 3 168 38 200 7.28e-49 163
Msa1297710 MtrunA17_Chr8g0384721 39.916 238 123 6 1 229 1 227 7.85e-49 164
Msa1297710 MtrunA17_Chr4g0056541 51.613 155 69 3 7 160 7 156 7.87e-49 167
Msa1297710 MtrunA17_Chr4g0018391 49.123 171 76 4 7 176 7 167 8.79e-49 166
Msa1297710 MtrunA17_Chr3g0128151 53.374 163 71 3 7 168 22 180 1.02e-48 171
Msa1297710 MtrunA17_Chr2g0309331 49.398 166 75 4 3 165 6 165 2.00e-48 165
Msa1297710 MtrunA17_Chr5g0398971 43.367 196 94 5 7 197 7 190 4.60e-48 164
Msa1297710 MtrunA17_Chr3g0130101 34.405 311 177 8 6 310 6 295 6.52e-48 164
Msa1297710 MtrunA17_Chr7g0252971 45.304 181 83 4 7 177 8 182 8.47e-48 163
Msa1297710 MtrunA17_Chr3g0130731 48.276 174 81 3 1 171 1 168 9.69e-48 162
Msa1297710 MtrunA17_Chr3g0091921 47.647 170 82 3 5 172 14 178 1.58e-47 162
Msa1297710 MtrunA17_Chr2g0318081 45.810 179 92 2 5 183 14 187 1.61e-47 163
Msa1297710 MtrunA17_Chr4g0060931 47.619 168 81 3 7 172 17 179 2.31e-47 163
Msa1297710 MtrunA17_Chr4g0076731 51.613 155 69 3 6 160 53 201 5.07e-47 164
Msa1297710 MtrunA17_Chr4g0017921 51.613 155 68 3 7 160 8 156 7.09e-47 161
Msa1297710 MtrunA17_Chr8g0364791 48.125 160 80 1 7 166 6 162 7.14e-47 164
Msa1297710 MtrunA17_Chr2g0318101 47.879 165 72 4 7 160 15 176 9.85e-47 161
Msa1297710 MtrunA17_Chr2g0326361 46.067 178 87 4 7 179 14 187 1.27e-46 160
Msa1297710 MtrunA17_Chr1g0197361 51.553 161 73 4 2 161 3 159 4.12e-46 164
Msa1297710 MtrunA17_Chr7g0214071 49.367 158 72 3 3 160 11 160 4.16e-46 156
Msa1297710 MtrunA17_Chr4g0047841 53.191 141 63 2 7 147 15 152 8.89e-46 158
Msa1297710 MtrunA17_Chr3g0124761 45.556 180 89 3 1 177 1 174 1.20e-45 156
Msa1297710 MtrunA17_Chr8g0346001 42.051 195 96 4 1 183 9 198 2.36e-45 159
Msa1297710 MtrunA17_Chr4g0042561 48.795 166 74 4 7 167 9 168 4.26e-45 154
Msa1297710 MtrunA17_Chr6g0484441 43.678 174 85 4 7 177 5 168 4.75e-45 155
Msa1297710 MtrunA17_Chr8g0359921 50.909 165 72 4 5 166 12 170 4.85e-45 156
Msa1297710 MtrunA17_Chr5g0417791 47.953 171 78 4 5 170 1 165 1.15e-44 153
Msa1297710 MtrunA17_Chr5g0417001 42.157 204 106 5 6 200 13 213 1.38e-44 156
Msa1297710 MtrunA17_Chr2g0316971 55.725 131 55 2 7 137 23 150 1.39e-44 156
Msa1297710 MtrunA17_Chr3g0092671 50.625 160 72 5 4 161 2 156 1.44e-44 159
Msa1297710 MtrunA17_Chr7g0263931 38.767 227 128 5 5 224 9 231 2.42e-44 154
Msa1297710 MtrunA17_Chr8g0361731 45.402 174 83 4 6 170 13 183 3.16e-44 155
Msa1297710 MtrunA17_Chr1g0147421 40.865 208 113 6 7 212 27 226 3.39e-44 154
Msa1297710 MtrunA17_Chr6g0453451 47.853 163 78 3 7 167 20 177 3.66e-44 153
Msa1297710 MtrunA17_Chr3g0139331 40.845 213 119 4 7 217 11 218 4.01e-44 154
Msa1297710 MtrunA17_Chr8g0384201 45.625 160 84 1 7 166 6 162 8.11e-44 156
Msa1297710 MtrunA17_Chr1g0197351 51.553 161 69 2 7 161 42 199 1.49e-43 155
Msa1297710 MtrunA17_Chr6g0453131 47.853 163 72 3 7 160 15 173 2.01e-43 153
Msa1297710 MtrunA17_Chr6g0461661 50.725 138 65 2 5 142 16 150 3.29e-43 152
Msa1297710 MtrunA17_Chr7g0253011 44.444 171 90 3 4 171 14 182 1.69e-42 150
Msa1297710 MtrunA17_Chr4g0038751 48.684 152 71 3 9 160 17 161 8.72e-41 144
Msa1297710 MtrunA17_Chr3g0144271 55.303 132 55 3 7 137 23 151 1.71e-40 146
Msa1297710 MtrunA17_Chr2g0311661 36.864 236 120 8 9 222 23 251 2.64e-40 142
Msa1297710 MtrunA17_Chr7g0217711 51.562 128 57 2 10 137 22 144 3.38e-40 139
Msa1297710 MtrunA17_Chr2g0311651 39.234 209 104 6 9 195 24 231 1.77e-39 141
Msa1297710 MtrunA17_Chr1g0183741 39.048 210 101 5 7 198 10 210 2.30e-39 139
Msa1297710 MtrunA17_Chr5g0442771 37.619 210 108 4 6 201 17 217 2.44e-39 140
Msa1297710 MtrunA17_Chr7g0217721 51.562 128 57 2 10 137 22 144 4.67e-39 140
Msa1297710 MtrunA17_Chr2g0312321 47.590 166 72 6 7 169 11 164 1.71e-38 138
Msa1297710 MtrunA17_Chr7g0261411 47.712 153 69 4 7 157 10 153 7.46e-38 136
Msa1297710 MtrunA17_Chr8g0345671 52.672 131 59 3 7 136 11 139 3.11e-37 137
Msa1297710 MtrunA17_Chr2g0321741 43.017 179 83 6 27 200 12 176 5.06e-37 135
Msa1297710 MtrunA17_Chr8g0385991 43.333 180 85 5 3 173 10 181 5.09e-36 129
Msa1297710 MtrunA17_Chr8g0345711 47.183 142 69 4 7 144 12 151 4.13e-35 125
Msa1297710 MtrunA17_Chr8g0345691 45.752 153 75 5 7 158 12 157 7.37e-34 128
Msa1297710 MtrunA17_Chr3g0131911 44.242 165 81 4 3 160 10 170 2.67e-33 122
Msa1297710 MtrunA17_Chr2g0321631 42.767 159 78 6 8 157 5 159 9.88e-33 121
Msa1297710 MtrunA17_Chr4g0026141 41.772 158 84 5 6 157 4 159 1.19e-32 121
Msa1297710 MtrunA17_Chr8g0345731 42.405 158 80 4 6 160 23 172 2.14e-32 118
Msa1297710 MtrunA17_Chr7g0266701 34.746 236 115 10 7 206 4 236 8.46e-32 119
Msa1297710 MtrunA17_Chr4g0050701 46.565 131 59 3 7 137 11 130 4.13e-31 115
Msa1297710 MtrunA17_Chr3g0113001 49.074 108 49 3 62 166 18 122 1.24e-27 109
Msa1297710 MtrunA17_Chr8g0345721 39.412 170 70 5 10 148 38 205 1.81e-25 101
Msa1297710 MtrunA17_Chr8g0345701 40.397 151 71 5 1 136 1 147 1.31e-24 98.2
Msa1297710 MtrunA17_Chr8g0345741 42.500 120 66 3 18 136 2 119 1.28e-23 94.7
Msa1297710 MtrunA17_Chr3g0113031 48.454 97 43 3 74 166 5 98 8.77e-21 90.1
Msa1297710 MtrunA17_Chr7g0243371 46.914 81 42 1 57 137 12 91 3.36e-19 81.6
Msa1297710 MtrunA17_Chr8g0384351 33.514 185 98 7 2 186 5 164 1.30e-17 79.3
Msa1297710 MtrunA17_Chr3g0130321 29.885 174 99 6 1 161 1 164 4.54e-13 67.4
Msa1297710 MtrunA17_Chr7g0251651 26.804 194 120 5 2 190 13 189 5.85e-13 66.6
Msa1297710 MtrunA17_Chr1g0194791 61.702 47 17 1 9 54 48 94 2.70e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297710 AT4G17980.2 54.849 299 120 7 3 297 2 289 3.39e-100 296
Msa1297710 AT4G17980.1 61.633 245 82 4 3 243 2 238 1.48e-98 291
Msa1297710 AT5G46590.1 52.189 297 131 5 3 297 2 289 4.34e-96 286
Msa1297710 AT5G46590.2 50.000 296 128 5 3 297 2 278 2.65e-90 271
Msa1297710 AT1G32510.1 60.262 229 71 5 6 228 5 219 1.50e-82 251
Msa1297710 AT3G17730.1 56.983 179 68 2 7 179 6 181 3.23e-66 208
Msa1297710 AT1G54330.1 65.806 155 47 2 7 161 6 154 4.33e-65 207
Msa1297710 AT1G65910.1 60.870 161 60 1 7 167 6 163 2.49e-64 214
Msa1297710 AT3G03200.1 61.935 155 55 2 7 160 6 157 4.40e-62 205
Msa1297710 AT5G17260.1 60.645 155 57 2 7 160 6 157 6.57e-62 204
Msa1297710 AT3G10500.1 54.194 155 68 1 7 161 9 160 1.32e-52 181
Msa1297710 AT5G04410.1 54.839 155 67 1 7 161 9 160 1.30e-51 179
Msa1297710 AT1G33060.1 53.988 163 68 2 2 160 15 174 3.07e-50 177
Msa1297710 AT1G33060.2 53.988 163 68 2 2 160 15 174 3.53e-50 176
Msa1297710 AT1G12260.2 46.500 200 92 6 7 201 7 196 5.10e-50 169
Msa1297710 AT5G22290.1 51.235 162 68 5 1 162 16 166 5.94e-50 169
Msa1297710 AT3G10490.1 53.459 159 70 2 4 161 24 179 6.36e-50 166
Msa1297710 AT1G71930.2 43.979 191 96 4 7 191 9 194 6.90e-50 169
Msa1297710 AT1G71930.1 43.979 191 96 4 7 191 9 194 6.90e-50 169
Msa1297710 AT4G35580.3 56.774 155 62 3 7 160 9 159 8.30e-50 174
Msa1297710 AT4G35580.1 56.774 155 62 3 7 160 9 159 8.45e-50 173
Msa1297710 AT4G36160.1 52.258 155 68 3 7 160 10 159 9.07e-50 170
Msa1297710 AT4G36160.3 52.258 155 68 3 7 160 10 159 9.07e-50 170
Msa1297710 AT4G35580.2 56.774 155 62 3 7 160 9 159 9.46e-50 173
Msa1297710 AT4G36160.2 52.258 155 68 3 7 160 14 163 1.01e-49 170
Msa1297710 AT5G07680.2 49.405 168 78 3 7 172 3 165 1.02e-49 168
Msa1297710 AT1G12260.1 46.500 200 92 6 7 201 7 196 1.05e-49 170
Msa1297710 AT3G44290.2 51.299 154 64 4 9 162 16 158 1.32e-49 165
Msa1297710 AT5G07680.1 49.405 168 78 3 7 172 17 179 1.33e-49 168
Msa1297710 AT3G49530.2 52.229 157 71 3 7 162 13 166 2.70e-49 169
Msa1297710 AT2G18060.3 47.674 172 78 4 7 177 9 169 3.22e-49 168
Msa1297710 AT2G18060.1 47.674 172 78 4 7 177 9 169 3.22e-49 168
Msa1297710 AT3G49530.1 52.229 157 71 3 7 162 13 166 6.27e-49 170
Msa1297710 AT3G10480.2 53.165 158 71 1 4 161 24 178 8.80e-49 169
Msa1297710 AT5G09330.5 47.561 164 83 1 3 166 2 162 9.08e-49 170
Msa1297710 AT5G09330.2 47.561 164 83 1 3 166 2 162 9.08e-49 170
Msa1297710 AT5G09330.4 47.561 164 83 1 3 166 2 162 9.08e-49 170
Msa1297710 AT5G09330.3 47.561 164 83 1 3 166 2 162 9.08e-49 170
Msa1297710 AT5G09330.1 47.561 164 83 1 3 166 2 162 9.08e-49 170
Msa1297710 AT3G10480.1 52.830 159 71 2 4 161 24 179 1.22e-48 169
Msa1297710 AT5G66300.1 51.282 156 71 3 7 161 12 163 1.53e-48 164
Msa1297710 AT3G10490.2 53.459 159 70 2 4 161 24 179 1.73e-48 168
Msa1297710 AT3G44290.1 51.299 154 64 4 9 162 16 158 2.65e-48 165
Msa1297710 AT1G62700.1 51.613 155 69 3 7 160 7 156 2.69e-48 166
Msa1297710 AT1G62700.2 51.613 155 69 3 7 160 7 156 2.69e-48 166
Msa1297710 AT4G27410.2 49.112 169 81 2 5 173 12 175 2.80e-48 164
Msa1297710 AT5G61430.1 47.399 173 84 3 2 172 11 178 3.26e-48 165
Msa1297710 AT2G02450.1 50.968 155 70 3 6 160 50 198 3.59e-48 166
Msa1297710 AT2G02450.2 50.968 155 70 3 6 160 50 198 3.65e-48 167
Msa1297710 AT5G64060.1 46.341 164 85 1 3 166 2 162 4.37e-48 165
Msa1297710 AT1G32770.1 37.643 263 135 9 1 250 10 256 1.56e-47 164
Msa1297710 AT5G62380.2 45.652 184 89 4 1 183 1 174 2.10e-47 163
Msa1297710 AT5G62380.1 45.652 184 89 4 1 183 1 174 2.10e-47 163
Msa1297710 AT1G79580.3 52.795 161 66 4 3 160 13 166 4.98e-47 162
Msa1297710 AT1G79580.5 52.795 161 66 4 3 160 13 166 4.98e-47 162
Msa1297710 AT1G79580.4 52.795 161 66 4 3 160 13 166 4.98e-47 162
Msa1297710 AT1G79580.2 52.795 161 66 4 3 160 13 166 4.98e-47 162
Msa1297710 AT1G79580.1 52.795 161 66 4 3 160 13 166 4.98e-47 162
Msa1297710 AT5G24590.2 51.282 156 74 1 7 162 13 166 1.17e-46 163
Msa1297710 AT3G61910.1 42.157 204 97 5 1 188 5 203 1.21e-46 160
Msa1297710 AT2G24430.2 35.548 301 161 8 7 283 16 307 1.38e-46 160
Msa1297710 AT2G24430.1 35.548 301 161 8 7 283 16 307 1.38e-46 160
Msa1297710 AT4G10350.1 50.289 173 74 6 7 173 9 175 1.46e-46 160
Msa1297710 AT1G52890.1 45.556 180 91 3 5 184 12 184 1.82e-46 159
Msa1297710 AT3G15500.1 47.024 168 84 2 5 172 12 174 2.33e-46 159
Msa1297710 AT5G39610.1 46.893 177 81 4 2 173 15 183 2.81e-46 158
Msa1297710 AT3G18400.1 47.826 161 78 3 7 167 5 159 4.08e-46 159
Msa1297710 AT3G15170.1 43.721 215 104 5 6 215 19 221 6.15e-46 158
Msa1297710 AT1G61110.1 48.538 171 72 5 7 165 16 182 6.25e-46 158
Msa1297710 AT5G08790.1 40.164 244 127 6 1 238 1 231 6.47e-46 157
Msa1297710 AT2G27300.1 50.327 153 65 4 7 159 14 155 1.24e-45 158
Msa1297710 AT2G33480.2 50.943 159 68 3 2 160 10 158 1.27e-45 156
Msa1297710 AT2G33480.1 51.875 160 67 4 2 160 10 160 2.19e-45 155
Msa1297710 AT4G27410.3 46.196 184 81 3 5 173 12 192 4.27e-45 156
Msa1297710 AT1G69490.1 49.390 164 72 4 7 165 9 166 5.85e-45 154
Msa1297710 AT3G04070.2 48.503 167 75 4 7 164 10 174 6.51e-45 156
Msa1297710 AT2G46770.1 42.714 199 82 6 1 178 10 197 7.13e-45 157
Msa1297710 AT3G29035.1 46.821 173 79 3 7 179 24 183 8.18e-45 155
Msa1297710 AT1G33280.1 49.677 155 71 4 7 160 8 156 9.16e-45 155
Msa1297710 AT1G01720.1 47.953 171 77 4 1 166 1 164 2.65e-44 153
Msa1297710 AT5G63790.1 43.655 197 98 4 1 192 44 232 6.01e-44 153
Msa1297710 AT1G34190.1 53.957 139 61 1 2 140 11 146 6.35e-44 158
Msa1297710 AT5G63790.2 43.655 197 98 4 1 192 54 242 6.68e-44 153
Msa1297710 AT3G04070.1 52.899 138 61 2 7 142 10 145 9.17e-44 154
Msa1297710 AT3G10480.3 44.792 192 69 3 4 161 24 212 1.26e-43 157
Msa1297710 AT3G04060.1 46.386 166 83 3 7 170 20 181 1.35e-43 152
Msa1297710 AT1G76420.1 48.765 162 79 3 7 168 22 179 1.37e-43 152
Msa1297710 AT2G43000.1 48.366 153 73 3 9 160 20 167 3.02e-43 150
Msa1297710 AT3G15510.1 45.238 168 78 4 11 167 21 185 1.39e-42 150
Msa1297710 AT5G53950.1 52.941 136 61 2 7 142 17 149 3.59e-42 150
Msa1297710 AT1G34180.3 50.658 152 72 1 9 160 18 166 3.99e-42 151
Msa1297710 AT1G26870.1 41.129 248 119 9 1 226 12 254 4.14e-42 150
Msa1297710 AT5G13180.1 54.074 135 56 2 3 137 10 138 1.01e-41 145
Msa1297710 AT5G39820.1 52.273 132 60 2 6 137 19 147 1.03e-41 148
Msa1297710 AT5G18270.2 46.951 164 73 4 7 164 21 176 1.04e-41 147
Msa1297710 AT5G18270.1 46.341 164 74 4 7 164 21 176 1.87e-41 147
Msa1297710 AT1G34180.1 50.658 152 72 1 9 160 18 166 1.94e-41 151
Msa1297710 AT2G17040.1 44.737 152 77 2 9 160 8 152 4.91e-41 144
Msa1297710 AT1G77450.1 40.887 203 104 5 5 201 8 200 1.03e-40 143
Msa1297710 AT1G52880.1 47.239 163 75 4 11 164 21 181 1.89e-40 144
Msa1297710 AT1G32870.2 58.779 131 49 2 7 137 10 135 1.34e-39 146
Msa1297710 AT1G32870.1 58.779 131 49 2 7 137 10 135 1.50e-39 146
Msa1297710 AT3G12977.1 46.154 156 78 3 7 161 18 168 2.27e-39 140
Msa1297710 AT1G32870.3 58.779 131 49 2 7 137 46 171 2.86e-39 145
Msa1297710 AT1G34180.4 46.951 164 72 2 9 160 18 178 6.28e-39 143
Msa1297710 AT1G34180.2 46.951 164 72 2 9 160 18 178 1.94e-38 143
Msa1297710 AT3G12910.1 38.462 221 103 7 2 194 17 232 2.90e-37 135
Msa1297710 AT1G56010.2 45.963 161 74 5 7 161 19 172 3.60e-37 135
Msa1297710 AT5G04395.1 46.154 143 66 1 7 138 28 170 9.27e-37 130
Msa1297710 AT4G28530.1 43.503 177 71 6 7 164 10 176 1.03e-34 129
Msa1297710 AT5G22380.1 36.000 200 107 6 10 190 8 205 4.56e-30 114
Msa1297710 AT5G61430.2 49.550 111 51 2 64 172 8 115 1.25e-29 114
Msa1297710 AT3G44350.2 33.649 211 122 8 7 202 5 212 7.16e-27 106
Msa1297710 AT4G01550.1 38.636 176 101 4 10 184 7 176 8.87e-27 109
Msa1297710 AT5G64530.2 43.609 133 60 4 7 139 3 120 1.36e-26 103
Msa1297710 AT1G02230.1 33.908 174 104 5 5 176 1 165 2.23e-26 107
Msa1297710 AT5G64530.1 43.609 133 60 4 7 139 3 120 3.57e-26 102
Msa1297710 AT4G10350.2 52.212 113 47 4 64 173 20 128 6.10e-26 105
Msa1297710 AT4G01520.1 35.000 160 97 3 8 165 5 159 2.81e-25 103
Msa1297710 AT3G12977.2 50.505 99 45 2 64 161 20 115 7.71e-25 100
Msa1297710 AT1G02250.1 37.126 167 95 5 8 171 4 163 4.10e-24 101
Msa1297710 AT4G01540.4 34.810 158 96 3 10 165 7 159 9.77e-24 100
Msa1297710 AT4G28530.2 45.946 111 40 3 7 100 10 117 1.17e-23 99.4
Msa1297710 AT4G01540.2 26.190 294 184 8 10 298 7 272 1.30e-23 100
Msa1297710 AT4G01540.3 34.810 158 96 3 10 165 7 159 2.06e-23 100
Msa1297710 AT4G01540.1 26.190 294 184 8 10 298 7 272 2.96e-23 100
Msa1297710 AT1G56010.1 50.485 103 41 3 64 161 8 105 4.73e-23 96.3
Msa1297710 AT3G44350.1 37.410 139 82 4 7 142 5 141 1.27e-22 92.8
Msa1297710 AT2G33480.3 50.000 98 44 3 64 160 10 103 2.07e-22 93.6
Msa1297710 AT3G04420.2 38.462 130 75 3 8 135 4 130 8.17e-22 93.6
Msa1297710 AT3G04420.1 38.462 130 75 3 8 135 4 130 1.29e-21 94.0
Msa1297710 AT1G01010.1 30.348 201 120 8 10 198 6 198 7.37e-19 87.0
Msa1297710 AT1G02220.1 33.835 133 74 4 8 135 4 127 3.14e-17 82.0
Msa1297710 AT3G55210.1 34.014 147 80 4 4 137 8 150 2.40e-16 78.2
Msa1297710 AT3G10490.4 49.383 81 37 2 82 161 2 79 4.86e-16 78.2
Msa1297710 AT3G10490.3 49.383 81 37 2 82 161 2 79 4.86e-16 78.2
Msa1297710 AT3G56530.1 32.026 153 96 4 7 157 52 198 5.77e-16 77.8
Msa1297710 AT5G14000.2 31.429 140 87 3 1 138 9 141 1.84e-15 73.2
Msa1297710 AT5G50820.1 31.250 160 96 5 4 159 14 163 2.70e-15 73.6
Msa1297710 AT5G14000.1 27.461 193 128 4 1 191 9 191 3.25e-15 73.6
Msa1297710 AT2G43000.2 40.659 91 50 2 71 160 2 89 1.77e-13 68.6
Msa1297710 AT2G18060.2 44.595 74 36 2 87 160 2 70 1.99e-13 69.7
Msa1297710 AT5G22290.2 46.667 75 31 3 88 162 2 67 6.55e-13 67.8

Find 66 sgRNAs with CRISPR-Local

Find 200 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATGGACTATAATGGAAAT+TGG 0.146738 8_3:+58213025 Msa1297710:CDS
CTATTTGTTCTTGATCCATT+TGG 0.249925 8_3:-58212017 None:intergenic
TCAGATAATGTAAGTCAAAA+TGG 0.276555 8_3:+58212967 Msa1297710:CDS
AAACCAATCCTTCAAACTTC+TGG 0.290622 8_3:+58212670 Msa1297710:CDS
GTTTGAAGGATTGGTTTCTA+TGG 0.297007 8_3:-58212664 None:intergenic
TATTTGTTCTTGATCCATTT+GGG 0.300747 8_3:-58212016 None:intergenic
GAAGAATCAAGAATCATATC+AGG 0.310654 8_3:-58212699 None:intergenic
GGGAATTTCATGGACTATAA+TGG 0.316926 8_3:+58213018 Msa1297710:CDS
TGAGGTCTCACTTCCATTGA+TGG 0.347267 8_3:-58212550 None:intergenic
ATTATATGTACCTTAAAATA+TGG 0.351863 8_3:-58212227 None:intergenic
CAAGCAAGTCACCTGAATAA+TGG 0.364530 8_3:+58212600 Msa1297710:CDS
ATTTGATTATAAACCTCATA+AGG 0.374916 8_3:-58213054 None:intergenic
GGCTTTCCAGTAGCCAGCTT+TGG 0.387525 8_3:-58212045 None:intergenic
GATCCAGAAGTTTGAAGGAT+TGG 0.396961 8_3:-58212673 None:intergenic
AAGTTCTCAAGGGAATTTCA+TGG 0.401113 8_3:+58213008 Msa1297710:CDS
AACCATTCTAAATCTCGTTT+CGG 0.406610 8_3:-58211966 None:intergenic
CTTTAGGCGATAGAACTAAC+TGG 0.414854 8_3:+58212159 Msa1297710:CDS
CATGGACTATAATGGAAATT+GGG 0.418240 8_3:+58213026 Msa1297710:CDS
TATCTTGGAAGGGCTCCTTT+AGG 0.429258 8_3:+58212143 Msa1297710:CDS
AAATTGGGATGTTCCTTATG+AGG 0.431601 8_3:+58213041 Msa1297710:CDS
TGAATCACCAAGGCAATCAT+TGG 0.432172 8_3:+58212885 Msa1297710:CDS
GAGCTACCAAAGCTGGCTAC+TGG 0.434106 8_3:+58212039 Msa1297710:CDS
ACATGGTTAAACTCGGCAAT+TGG 0.434194 8_3:-58212639 None:intergenic
TTTGCAGTTGCCTGTGATAG+TGG 0.456084 8_3:-58212108 None:intergenic
TTCCCTTGAGAACTTGAGTA+AGG 0.464374 8_3:-58213000 None:intergenic
GGGGAGATCCAGAAGTTTGA+AGG 0.472729 8_3:-58212678 None:intergenic
TACCGAAACGAGATTTAGAA+TGG 0.473383 8_3:+58211964 Msa1297710:CDS
ACAAATAGAGCTACCAAAGC+TGG 0.483596 8_3:+58212032 Msa1297710:CDS
TATGATTCTTGATTCTTCAA+AGG 0.498256 8_3:+58212704 Msa1297710:CDS
CTAGTTCTTCATCAGTTGGA+TGG 0.505033 8_3:-58211621 None:intergenic
CCAACTGATGAAGAACTAGT+TGG 0.507449 8_3:+58211625 Msa1297710:CDS
CAGTTAGTTCTATCGCCTAA+AGG 0.507948 8_3:-58212158 None:intergenic
CCAACTAGTTCTTCATCAGT+TGG 0.511441 8_3:-58211625 None:intergenic
CGAGATCTAAAGTACCCAAA+TGG 0.514202 8_3:+58212002 Msa1297710:CDS
AAATTTGAGTAGGATAAAGT+AGG 0.517258 8_3:-58212925 None:intergenic
ATACTATCTTAAAAGAAAAG+TGG 0.531146 8_3:+58211648 Msa1297710:CDS
TCACCTTACTCAAGTTCTCA+AGG 0.532937 8_3:+58212997 Msa1297710:CDS
TTTGATCCATGGGAGTTGCC+TGG 0.534126 8_3:+58211721 Msa1297710:CDS
TGCCTTGGTGATTCACAACT+AGG 0.543287 8_3:-58212877 None:intergenic
GTTGCAACAAGTTCCATCAA+TGG 0.552945 8_3:+58212537 Msa1297710:CDS
ATATGTTCCAATGATTGCCT+TGG 0.556930 8_3:-58212892 None:intergenic
GCTGGCTACTGGAAAGCCAC+TGG 0.557528 8_3:+58212050 Msa1297710:CDS
AAGAATCAAGAATCATATCA+GGG 0.565558 8_3:-58212698 None:intergenic
GATTGGTTTCTATGGAAACA+TGG 0.569920 8_3:-58212656 None:intergenic
CCTTAAAATATGGAGAGTCT+TGG 0.569933 8_3:-58212217 None:intergenic
AAAAGAATGAGAAGAGCAAG+AGG 0.571312 8_3:+58212514 Msa1297710:CDS
TTCTGCATTAAAATTTGAGT+AGG 0.579123 8_3:-58212935 None:intergenic
TGTAGTTCATCCACTATCAC+AGG 0.581968 8_3:+58212098 Msa1297710:CDS
GTTGGATGGAAACGAAAACC+TGG 0.593509 8_3:-58211607 None:intergenic
ACTGGATCATGCAAGAGTAT+CGG 0.596245 8_3:+58212177 Msa1297710:CDS
TATGGAAACATGGTTAAACT+CGG 0.597037 8_3:-58212646 None:intergenic
CACCTTACTCAAGTTCTCAA+GGG 0.598211 8_3:+58212998 Msa1297710:CDS
AGATTACCAGGCAACTCCCA+TGG 0.598328 8_3:-58211727 None:intergenic
GAATAATGGATCACAAAATG+TGG 0.600990 8_3:+58212614 Msa1297710:CDS
GGAGCATTATTACTGCCACC+AGG 0.607504 8_3:+58211589 Msa1297710:CDS
GTCACTTGAGAATCTCATTG+AGG 0.608676 8_3:-58212568 None:intergenic
TATCTTAAAAGAAAAGTGGA+AGG 0.610976 8_3:+58211652 Msa1297710:CDS
AGAGTCTTGGCTAAGATCAT+CGG 0.612585 8_3:-58212204 None:intergenic
ACATTGCAATATAACATGGA+AGG 0.636691 8_3:+58211568 None:intergenic
AAGAGAGAAAGATTGTGTGC+CGG 0.639026 8_3:+58212075 Msa1297710:CDS
CTCCTAGTTGTGAATCACCA+AGG 0.645942 8_3:+58212875 Msa1297710:CDS
CTTGGTGATTCACAACTAGG+AGG 0.658943 8_3:-58212874 None:intergenic
AAAGAATGAGAAGAGCAAGA+GGG 0.661577 8_3:+58212515 Msa1297710:CDS
TGATAGTGGATGAACTACAC+CGG 0.698203 8_3:-58212094 None:intergenic
AGAATCAAGAATCATATCAG+GGG 0.707288 8_3:-58212697 None:intergenic
GGATGGAAACGAAAACCTGG+TGG 0.763193 8_3:-58211604 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATAATATGAACAAATA+AGG + chr8_3:58212748-58212767 Msa1297710:intron 10.0%
!! AATTATAATATGAACAAATA+AGG + chr8_3:58212748-58212767 Msa1297710:intron 10.0%
!! AATAGTATATTTCAAATGTA+AGG + chr8_3:58211803-58211822 Msa1297710:intron 15.0%
!! ATTATATGTACCTTAAAATA+TGG - chr8_3:58212230-58212249 None:intergenic 15.0%
!! AATAGTATATTTCAAATGTA+AGG + chr8_3:58211803-58211822 Msa1297710:intron 15.0%
!! ATTATATGTACCTTAAAATA+TGG - chr8_3:58212230-58212249 None:intergenic 15.0%
!! ATACTATCTTAAAAGAAAAG+TGG + chr8_3:58211648-58211667 Msa1297710:CDS 20.0%
!! AATTTGTAAAAATCAATCAC+TGG - chr8_3:58211703-58211722 None:intergenic 20.0%
!!! ATTTTTACAAATTTGATCCA+TGG + chr8_3:58211710-58211729 Msa1297710:CDS 20.0%
!!! TTTTTACAAATTTGATCCAT+GGG + chr8_3:58211711-58211730 Msa1297710:CDS 20.0%
!! ATTTGATTATAAACCTCATA+AGG - chr8_3:58213057-58213076 None:intergenic 20.0%
!! ATACTATCTTAAAAGAAAAG+TGG + chr8_3:58211648-58211667 Msa1297710:CDS 20.0%
!! AATTTGTAAAAATCAATCAC+TGG - chr8_3:58211703-58211722 None:intergenic 20.0%
!!! ATTTTTACAAATTTGATCCA+TGG + chr8_3:58211710-58211729 Msa1297710:CDS 20.0%
!!! TTTTTACAAATTTGATCCAT+GGG + chr8_3:58211711-58211730 Msa1297710:CDS 20.0%
!! ATTTGATTATAAACCTCATA+AGG - chr8_3:58213057-58213076 None:intergenic 20.0%
! TATCTTAAAAGAAAAGTGGA+AGG + chr8_3:58211652-58211671 Msa1297710:CDS 25.0%
! TTCAAATGTAAGGTTTGATA+TGG + chr8_3:58211813-58211832 Msa1297710:intron 25.0%
! TAAAAGATTCTATTTCACAC+AGG - chr8_3:58211863-58211882 None:intergenic 25.0%
! TTTCTGCATTGTTTATGATA+AGG + chr8_3:58211891-58211910 Msa1297710:intron 25.0%
! TATTTGTTCTTGATCCATTT+GGG - chr8_3:58212019-58212038 None:intergenic 25.0%
!!! AAAACACTTGTTTTCTATCT+TGG + chr8_3:58212128-58212147 Msa1297710:CDS 25.0%
!!! TCTCATTCTTTTTGATAACT+CGG - chr8_3:58212506-58212525 None:intergenic 25.0%
! AAGAATCAAGAATCATATCA+GGG - chr8_3:58212701-58212720 None:intergenic 25.0%
! TATGATTCTTGATTCTTCAA+AGG + chr8_3:58212704-58212723 Msa1297710:CDS 25.0%
! GAGATTGAATGACTATAATT+TGG + chr8_3:58212777-58212796 Msa1297710:intron 25.0%
! AAATTTGAGTAGGATAAAGT+AGG - chr8_3:58212928-58212947 None:intergenic 25.0%
! TTCTGCATTAAAATTTGAGT+AGG - chr8_3:58212938-58212957 None:intergenic 25.0%
! TCAGATAATGTAAGTCAAAA+TGG + chr8_3:58212967-58212986 Msa1297710:CDS 25.0%
! TATCTTAAAAGAAAAGTGGA+AGG + chr8_3:58211652-58211671 Msa1297710:CDS 25.0%
! TTCAAATGTAAGGTTTGATA+TGG + chr8_3:58211813-58211832 Msa1297710:intron 25.0%
! TAAAAGATTCTATTTCACAC+AGG - chr8_3:58211863-58211882 None:intergenic 25.0%
! TTTCTGCATTGTTTATGATA+AGG + chr8_3:58211891-58211910 Msa1297710:intron 25.0%
! TATTTGTTCTTGATCCATTT+GGG - chr8_3:58212019-58212038 None:intergenic 25.0%
!!! AAAACACTTGTTTTCTATCT+TGG + chr8_3:58212128-58212147 Msa1297710:CDS 25.0%
!!! TCTCATTCTTTTTGATAACT+CGG - chr8_3:58212506-58212525 None:intergenic 25.0%
! AAGAATCAAGAATCATATCA+GGG - chr8_3:58212701-58212720 None:intergenic 25.0%
! TATGATTCTTGATTCTTCAA+AGG + chr8_3:58212704-58212723 Msa1297710:CDS 25.0%
! GAGATTGAATGACTATAATT+TGG + chr8_3:58212777-58212796 Msa1297710:intron 25.0%
! AAATTTGAGTAGGATAAAGT+AGG - chr8_3:58212928-58212947 None:intergenic 25.0%
! TTCTGCATTAAAATTTGAGT+AGG - chr8_3:58212938-58212957 None:intergenic 25.0%
! TCAGATAATGTAAGTCAAAA+TGG + chr8_3:58212967-58212986 Msa1297710:CDS 25.0%
ATGTGAAATTGAAGATTACC+AGG - chr8_3:58211742-58211761 None:intergenic 30.0%
AACCATTCTAAATCTCGTTT+CGG - chr8_3:58211969-58211988 None:intergenic 30.0%
CTATTTGTTCTTGATCCATT+TGG - chr8_3:58212020-58212039 None:intergenic 30.0%
!! ACTTGTTTTCTATCTTGGAA+GGG + chr8_3:58212133-58212152 Msa1297710:CDS 30.0%
!! AAGGAGTTTGTTTTCTATGT+AGG - chr8_3:58212365-58212384 None:intergenic 30.0%
ACAAAGCTAACACATTACTA+AGG - chr8_3:58212384-58212403 None:intergenic 30.0%
! CATTTTGTGATCCATTATTC+AGG - chr8_3:58212614-58212633 None:intergenic 30.0%
!! GAATAATGGATCACAAAATG+TGG + chr8_3:58212614-58212633 Msa1297710:CDS 30.0%
TATGGAAACATGGTTAAACT+CGG - chr8_3:58212649-58212668 None:intergenic 30.0%
AGAATCAAGAATCATATCAG+GGG - chr8_3:58212700-58212719 None:intergenic 30.0%
GAAGAATCAAGAATCATATC+AGG - chr8_3:58212702-58212721 None:intergenic 30.0%
! TCATGGACTATAATGGAAAT+TGG + chr8_3:58213025-58213044 Msa1297710:CDS 30.0%
! CATGGACTATAATGGAAATT+GGG + chr8_3:58213026-58213045 Msa1297710:CDS 30.0%
ATGTGAAATTGAAGATTACC+AGG - chr8_3:58211742-58211761 None:intergenic 30.0%
AACCATTCTAAATCTCGTTT+CGG - chr8_3:58211969-58211988 None:intergenic 30.0%
CTATTTGTTCTTGATCCATT+TGG - chr8_3:58212020-58212039 None:intergenic 30.0%
!! ACTTGTTTTCTATCTTGGAA+GGG + chr8_3:58212133-58212152 Msa1297710:CDS 30.0%
!! AAGGAGTTTGTTTTCTATGT+AGG - chr8_3:58212365-58212384 None:intergenic 30.0%
ACAAAGCTAACACATTACTA+AGG - chr8_3:58212384-58212403 None:intergenic 30.0%
! CATTTTGTGATCCATTATTC+AGG - chr8_3:58212614-58212633 None:intergenic 30.0%
!! GAATAATGGATCACAAAATG+TGG + chr8_3:58212614-58212633 Msa1297710:CDS 30.0%
TATGGAAACATGGTTAAACT+CGG - chr8_3:58212649-58212668 None:intergenic 30.0%
AGAATCAAGAATCATATCAG+GGG - chr8_3:58212700-58212719 None:intergenic 30.0%
GAAGAATCAAGAATCATATC+AGG - chr8_3:58212702-58212721 None:intergenic 30.0%
! TCATGGACTATAATGGAAAT+TGG + chr8_3:58213025-58213044 Msa1297710:CDS 30.0%
! CATGGACTATAATGGAAATT+GGG + chr8_3:58213026-58213045 Msa1297710:CDS 30.0%
TACCGAAACGAGATTTAGAA+TGG + chr8_3:58211964-58211983 Msa1297710:CDS 35.0%
! AATCTTTCTCTCTTTTCCAG+TGG - chr8_3:58212069-58212088 None:intergenic 35.0%
!! CACTTGTTTTCTATCTTGGA+AGG + chr8_3:58212132-58212151 Msa1297710:CDS 35.0%
CCTTAAAATATGGAGAGTCT+TGG - chr8_3:58212220-58212239 None:intergenic 35.0%
! CCAAGACTCTCCATATTTTA+AGG + chr8_3:58212217-58212236 Msa1297710:CDS 35.0%
! GTAGCGTCTTTGTATTTTCA+CGG + chr8_3:58212264-58212283 Msa1297710:intron 35.0%
!! CTTTAGCTTTAACAGAACGT+TGG + chr8_3:58212409-58212428 Msa1297710:intron 35.0%
GAACGTTGGAAGACTAAATT+AGG + chr8_3:58212423-58212442 Msa1297710:intron 35.0%
AAAAGAATGAGAAGAGCAAG+AGG + chr8_3:58212514-58212533 Msa1297710:CDS 35.0%
AAAGAATGAGAAGAGCAAGA+GGG + chr8_3:58212515-58212534 Msa1297710:CDS 35.0%
!! GATTGGTTTCTATGGAAACA+TGG - chr8_3:58212659-58212678 None:intergenic 35.0%
!! GTTTGAAGGATTGGTTTCTA+TGG - chr8_3:58212667-58212686 None:intergenic 35.0%
AAACCAATCCTTCAAACTTC+TGG + chr8_3:58212670-58212689 Msa1297710:CDS 35.0%
CTTTAGTATACTCCTACAGT+TGG - chr8_3:58212828-58212847 None:intergenic 35.0%
ATATGTTCCAATGATTGCCT+TGG - chr8_3:58212895-58212914 None:intergenic 35.0%
AAGTTCTCAAGGGAATTTCA+TGG + chr8_3:58213008-58213027 Msa1297710:CDS 35.0%
! GGGAATTTCATGGACTATAA+TGG + chr8_3:58213018-58213037 Msa1297710:CDS 35.0%
AAATTGGGATGTTCCTTATG+AGG + chr8_3:58213041-58213060 Msa1297710:CDS 35.0%
TACCGAAACGAGATTTAGAA+TGG + chr8_3:58211964-58211983 Msa1297710:CDS 35.0%
! AATCTTTCTCTCTTTTCCAG+TGG - chr8_3:58212069-58212088 None:intergenic 35.0%
!! CACTTGTTTTCTATCTTGGA+AGG + chr8_3:58212132-58212151 Msa1297710:CDS 35.0%
CCTTAAAATATGGAGAGTCT+TGG - chr8_3:58212220-58212239 None:intergenic 35.0%
! CCAAGACTCTCCATATTTTA+AGG + chr8_3:58212217-58212236 Msa1297710:CDS 35.0%
! GTAGCGTCTTTGTATTTTCA+CGG + chr8_3:58212264-58212283 Msa1297710:intron 35.0%
!! CTTTAGCTTTAACAGAACGT+TGG + chr8_3:58212409-58212428 Msa1297710:intron 35.0%
GAACGTTGGAAGACTAAATT+AGG + chr8_3:58212423-58212442 Msa1297710:intron 35.0%
AAAAGAATGAGAAGAGCAAG+AGG + chr8_3:58212514-58212533 Msa1297710:CDS 35.0%
AAAGAATGAGAAGAGCAAGA+GGG + chr8_3:58212515-58212534 Msa1297710:CDS 35.0%
!! GATTGGTTTCTATGGAAACA+TGG - chr8_3:58212659-58212678 None:intergenic 35.0%
!! GTTTGAAGGATTGGTTTCTA+TGG - chr8_3:58212667-58212686 None:intergenic 35.0%
AAACCAATCCTTCAAACTTC+TGG + chr8_3:58212670-58212689 Msa1297710:CDS 35.0%
CTTTAGTATACTCCTACAGT+TGG - chr8_3:58212828-58212847 None:intergenic 35.0%
ATATGTTCCAATGATTGCCT+TGG - chr8_3:58212895-58212914 None:intergenic 35.0%
AAGTTCTCAAGGGAATTTCA+TGG + chr8_3:58213008-58213027 Msa1297710:CDS 35.0%
! GGGAATTTCATGGACTATAA+TGG + chr8_3:58213018-58213037 Msa1297710:CDS 35.0%
AAATTGGGATGTTCCTTATG+AGG + chr8_3:58213041-58213060 Msa1297710:CDS 35.0%
! CTAGTTCTTCATCAGTTGGA+TGG - chr8_3:58211624-58211643 None:intergenic 40.0%
! CCAACTAGTTCTTCATCAGT+TGG - chr8_3:58211628-58211647 None:intergenic 40.0%
CCAACTGATGAAGAACTAGT+TGG + chr8_3:58211625-58211644 Msa1297710:CDS 40.0%
TTTGAGAAGCCTAATGCATG+AGG + chr8_3:58211917-58211936 Msa1297710:intron 40.0%
CATTTCACACCTCATGCATT+AGG - chr8_3:58211929-58211948 None:intergenic 40.0%
! CGAGATCTAAAGTACCCAAA+TGG + chr8_3:58212002-58212021 Msa1297710:CDS 40.0%
ACAAATAGAGCTACCAAAGC+TGG + chr8_3:58212032-58212051 Msa1297710:CDS 40.0%
AAGAGAGAAAGATTGTGTGC+CGG + chr8_3:58212075-58212094 Msa1297710:CDS 40.0%
!! TGATAGTGGATGAACTACAC+CGG - chr8_3:58212097-58212116 None:intergenic 40.0%
TGTAGTTCATCCACTATCAC+AGG + chr8_3:58212098-58212117 Msa1297710:CDS 40.0%
!! CAGTTAGTTCTATCGCCTAA+AGG - chr8_3:58212161-58212180 None:intergenic 40.0%
CTTTAGGCGATAGAACTAAC+TGG + chr8_3:58212159-58212178 Msa1297710:CDS 40.0%
! ACTGGATCATGCAAGAGTAT+CGG + chr8_3:58212177-58212196 Msa1297710:CDS 40.0%
AGAGTCTTGGCTAAGATCAT+CGG - chr8_3:58212207-58212226 None:intergenic 40.0%
TCAATTGCAAGGCTATGATC+TGG + chr8_3:58212308-58212327 Msa1297710:intron 40.0%
! GGAGCTTTTACTTTAACGTG+CGG + chr8_3:58212329-58212348 Msa1297710:intron 40.0%
! CTTTTACTTTAACGTGCGGT+GGG + chr8_3:58212333-58212352 Msa1297710:intron 40.0%
TGCATATATGTGGTTGCTGT+AGG + chr8_3:58212464-58212483 Msa1297710:intron 40.0%
GCATATATGTGGTTGCTGTA+GGG + chr8_3:58212465-58212484 Msa1297710:intron 40.0%
GTTGCAACAAGTTCCATCAA+TGG + chr8_3:58212537-58212556 Msa1297710:CDS 40.0%
GTCACTTGAGAATCTCATTG+AGG - chr8_3:58212571-58212590 None:intergenic 40.0%
CAAGCAAGTCACCTGAATAA+TGG + chr8_3:58212600-58212619 Msa1297710:CDS 40.0%
ACATGGTTAAACTCGGCAAT+TGG - chr8_3:58212642-58212661 None:intergenic 40.0%
GATCCAGAAGTTTGAAGGAT+TGG - chr8_3:58212676-58212695 None:intergenic 40.0%
! AGTTTTACTGCACCAACTGT+AGG + chr8_3:58212813-58212832 Msa1297710:intron 40.0%
TGAATCACCAAGGCAATCAT+TGG + chr8_3:58212885-58212904 Msa1297710:CDS 40.0%
TCACCTTACTCAAGTTCTCA+AGG + chr8_3:58212997-58213016 Msa1297710:CDS 40.0%
CACCTTACTCAAGTTCTCAA+GGG + chr8_3:58212998-58213017 Msa1297710:CDS 40.0%
TTCCCTTGAGAACTTGAGTA+AGG - chr8_3:58213003-58213022 None:intergenic 40.0%
! CTAGTTCTTCATCAGTTGGA+TGG - chr8_3:58211624-58211643 None:intergenic 40.0%
! CCAACTAGTTCTTCATCAGT+TGG - chr8_3:58211628-58211647 None:intergenic 40.0%
CCAACTGATGAAGAACTAGT+TGG + chr8_3:58211625-58211644 Msa1297710:CDS 40.0%
TTTGAGAAGCCTAATGCATG+AGG + chr8_3:58211917-58211936 Msa1297710:intron 40.0%
CATTTCACACCTCATGCATT+AGG - chr8_3:58211929-58211948 None:intergenic 40.0%
! CGAGATCTAAAGTACCCAAA+TGG + chr8_3:58212002-58212021 Msa1297710:CDS 40.0%
ACAAATAGAGCTACCAAAGC+TGG + chr8_3:58212032-58212051 Msa1297710:CDS 40.0%
AAGAGAGAAAGATTGTGTGC+CGG + chr8_3:58212075-58212094 Msa1297710:CDS 40.0%
!! TGATAGTGGATGAACTACAC+CGG - chr8_3:58212097-58212116 None:intergenic 40.0%
TGTAGTTCATCCACTATCAC+AGG + chr8_3:58212098-58212117 Msa1297710:CDS 40.0%
!! CAGTTAGTTCTATCGCCTAA+AGG - chr8_3:58212161-58212180 None:intergenic 40.0%
CTTTAGGCGATAGAACTAAC+TGG + chr8_3:58212159-58212178 Msa1297710:CDS 40.0%
! ACTGGATCATGCAAGAGTAT+CGG + chr8_3:58212177-58212196 Msa1297710:CDS 40.0%
AGAGTCTTGGCTAAGATCAT+CGG - chr8_3:58212207-58212226 None:intergenic 40.0%
TCAATTGCAAGGCTATGATC+TGG + chr8_3:58212308-58212327 Msa1297710:intron 40.0%
! GGAGCTTTTACTTTAACGTG+CGG + chr8_3:58212329-58212348 Msa1297710:intron 40.0%
! CTTTTACTTTAACGTGCGGT+GGG + chr8_3:58212333-58212352 Msa1297710:intron 40.0%
TGCATATATGTGGTTGCTGT+AGG + chr8_3:58212464-58212483 Msa1297710:intron 40.0%
GCATATATGTGGTTGCTGTA+GGG + chr8_3:58212465-58212484 Msa1297710:intron 40.0%
GTTGCAACAAGTTCCATCAA+TGG + chr8_3:58212537-58212556 Msa1297710:CDS 40.0%
GTCACTTGAGAATCTCATTG+AGG - chr8_3:58212571-58212590 None:intergenic 40.0%
CAAGCAAGTCACCTGAATAA+TGG + chr8_3:58212600-58212619 Msa1297710:CDS 40.0%
ACATGGTTAAACTCGGCAAT+TGG - chr8_3:58212642-58212661 None:intergenic 40.0%
GATCCAGAAGTTTGAAGGAT+TGG - chr8_3:58212676-58212695 None:intergenic 40.0%
! AGTTTTACTGCACCAACTGT+AGG + chr8_3:58212813-58212832 Msa1297710:intron 40.0%
TGAATCACCAAGGCAATCAT+TGG + chr8_3:58212885-58212904 Msa1297710:CDS 40.0%
TCACCTTACTCAAGTTCTCA+AGG + chr8_3:58212997-58213016 Msa1297710:CDS 40.0%
CACCTTACTCAAGTTCTCAA+GGG + chr8_3:58212998-58213017 Msa1297710:CDS 40.0%
TTCCCTTGAGAACTTGAGTA+AGG - chr8_3:58213003-58213022 None:intergenic 40.0%
GTTGGATGGAAACGAAAACC+TGG - chr8_3:58211610-58211629 None:intergenic 45.0%
TTTGCAGTTGCCTGTGATAG+TGG - chr8_3:58212111-58212130 None:intergenic 45.0%
TATCTTGGAAGGGCTCCTTT+AGG + chr8_3:58212143-58212162 Msa1297710:CDS 45.0%
TTGAACGCACGTCAATTGCA+AGG + chr8_3:58212297-58212316 Msa1297710:intron 45.0%
! GCTTTTACTTTAACGTGCGG+TGG + chr8_3:58212332-58212351 Msa1297710:intron 45.0%
TATATGTGGTTGCTGTAGGG+TGG + chr8_3:58212468-58212487 Msa1297710:intron 45.0%
TGAGGTCTCACTTCCATTGA+TGG - chr8_3:58212553-58212572 None:intergenic 45.0%
! CTTGGTGATTCACAACTAGG+AGG - chr8_3:58212877-58212896 None:intergenic 45.0%
CTCCTAGTTGTGAATCACCA+AGG + chr8_3:58212875-58212894 Msa1297710:CDS 45.0%
! TGCCTTGGTGATTCACAACT+AGG - chr8_3:58212880-58212899 None:intergenic 45.0%
GTTGGATGGAAACGAAAACC+TGG - chr8_3:58211610-58211629 None:intergenic 45.0%
TTTGCAGTTGCCTGTGATAG+TGG - chr8_3:58212111-58212130 None:intergenic 45.0%
TATCTTGGAAGGGCTCCTTT+AGG + chr8_3:58212143-58212162 Msa1297710:CDS 45.0%
TTGAACGCACGTCAATTGCA+AGG + chr8_3:58212297-58212316 Msa1297710:intron 45.0%
! GCTTTTACTTTAACGTGCGG+TGG + chr8_3:58212332-58212351 Msa1297710:intron 45.0%
TATATGTGGTTGCTGTAGGG+TGG + chr8_3:58212468-58212487 Msa1297710:intron 45.0%
TGAGGTCTCACTTCCATTGA+TGG - chr8_3:58212553-58212572 None:intergenic 45.0%
! CTTGGTGATTCACAACTAGG+AGG - chr8_3:58212877-58212896 None:intergenic 45.0%
CTCCTAGTTGTGAATCACCA+AGG + chr8_3:58212875-58212894 Msa1297710:CDS 45.0%
! TGCCTTGGTGATTCACAACT+AGG - chr8_3:58212880-58212899 None:intergenic 45.0%
! GGAGCATTATTACTGCCACC+AGG + chr8_3:58211589-58211608 Msa1297710:CDS 50.0%
GGATGGAAACGAAAACCTGG+TGG - chr8_3:58211607-58211626 None:intergenic 50.0%
TTTGATCCATGGGAGTTGCC+TGG + chr8_3:58211721-58211740 Msa1297710:CDS 50.0%
AGATTACCAGGCAACTCCCA+TGG - chr8_3:58211730-58211749 None:intergenic 50.0%
GGGGAGATCCAGAAGTTTGA+AGG - chr8_3:58212681-58212700 None:intergenic 50.0%
! GGAGCATTATTACTGCCACC+AGG + chr8_3:58211589-58211608 Msa1297710:CDS 50.0%
GGATGGAAACGAAAACCTGG+TGG - chr8_3:58211607-58211626 None:intergenic 50.0%
TTTGATCCATGGGAGTTGCC+TGG + chr8_3:58211721-58211740 Msa1297710:CDS 50.0%
AGATTACCAGGCAACTCCCA+TGG - chr8_3:58211730-58211749 None:intergenic 50.0%
GGGGAGATCCAGAAGTTTGA+AGG - chr8_3:58212681-58212700 None:intergenic 50.0%
GAGCTACCAAAGCTGGCTAC+TGG + chr8_3:58212039-58212058 Msa1297710:CDS 55.0%
GGCTTTCCAGTAGCCAGCTT+TGG - chr8_3:58212048-58212067 None:intergenic 55.0%
TGCACGCGCGTGCATATATG+TGG + chr8_3:58212454-58212473 Msa1297710:intron 55.0%
GAGCTACCAAAGCTGGCTAC+TGG + chr8_3:58212039-58212058 Msa1297710:CDS 55.0%
GGCTTTCCAGTAGCCAGCTT+TGG - chr8_3:58212048-58212067 None:intergenic 55.0%
TGCACGCGCGTGCATATATG+TGG + chr8_3:58212454-58212473 Msa1297710:intron 55.0%
GCTGGCTACTGGAAAGCCAC+TGG + chr8_3:58212050-58212069 Msa1297710:CDS 60.0%
GCTGGCTACTGGAAAGCCAC+TGG + chr8_3:58212050-58212069 Msa1297710:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 58211583 58213107 58211583 ID=Msa1297710;Name=Msa1297710
chr8_3 mRNA 58211583 58213107 58211583 ID=Msa1297710-mRNA-1;Parent=Msa1297710;Name=Msa1297710-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|1|0.5|1|1|1|4|0|319
chr8_3 exon 58211583 58211742 58211583 ID=Msa1297710-mRNA-1:exon:16669;Parent=Msa1297710-mRNA-1
chr8_3 exon 58211952 58212238 58211952 ID=Msa1297710-mRNA-1:exon:16670;Parent=Msa1297710-mRNA-1
chr8_3 exon 58212486 58212725 58212486 ID=Msa1297710-mRNA-1:exon:16671;Parent=Msa1297710-mRNA-1
chr8_3 exon 58212835 58213107 58212835 ID=Msa1297710-mRNA-1:exon:16672;Parent=Msa1297710-mRNA-1
chr8_3 CDS 58211583 58211742 58211583 ID=Msa1297710-mRNA-1:cds;Parent=Msa1297710-mRNA-1
chr8_3 CDS 58211952 58212238 58211952 ID=Msa1297710-mRNA-1:cds;Parent=Msa1297710-mRNA-1
chr8_3 CDS 58212486 58212725 58212486 ID=Msa1297710-mRNA-1:cds;Parent=Msa1297710-mRNA-1
chr8_3 CDS 58212835 58213107 58212835 ID=Msa1297710-mRNA-1:cds;Parent=Msa1297710-mRNA-1
Gene Sequence

>Msa1297710

ATGGAAGGAGCATTATTACTGCCACCAGGTTTTCGTTTCCATCCAACTGATGAAGAACTAGTTGGATACTATCTTAAAAGAAAAGTGGAAGGACTTGAAATTGAGCTTGATGTTATTCCAGTGATTGATTTTTACAAATTTGATCCATGGGAGTTGCCTGAGAAATCATTTCTACCGAAACGAGATTTAGAATGGTTTTTCTATTGTACGCGAGATCTAAAGTACCCAAATGGATCAAGAACAAATAGAGCTACCAAAGCTGGCTACTGGAAAGCCACTGGAAAAGAGAGAAAGATTGTGTGCCGGTGTAGTTCATCCACTATCACAGGCAACTGCAAAACACTTGTTTTCTATCTTGGAAGGGCTCCTTTAGGCGATAGAACTAACTGGATCATGCAAGAGTATCGGCTCACCGATGATCTTAGCCAAGACTCTCCATATTTTAAGGGTGGTTTAGCTTTGTGCCGAGTTATCAAAAAGAATGAGAAGAGCAAGAGGGTTGCAACAAGTTCCATCAATGGAAGTGAGACCTCAATGAGATTCTCAAGTGACGTTTCTTCTCAAGCAAGTCACCTGAATAATGGATCACAAAATGTGGCTCCAATTGCCGAGTTTAACCATGTTTCCATAGAAACCAATCCTTCAAACTTCTGGATCTCCCCTGATATGATTCTTGATTCTTCAAAGGAGTATACTAAAGTACAAGATGCACTGTTTGAATATTTTCCTCCTAGTTGTGAATCACCAAGGCAATCATTGGAACATATAACAACTTCACCTACTTTATCCTACTCAAATTTTAATGCAGAAAATGAATTTTCAGATAATGTAAGTCAAAATGGATGCATGTCACCTTACTCAAGTTCTCAAGGGAATTTCATGGACTATAATGGAAATTGGGATGTTCCTTATGAGGTTTATAATCAAATTAATTCAGTCTCATATCCTGAGCCTTTCTAA
Protein sequence

>Msa1297710

MEGALLLPPGFRFHPTDEELVGYYLKRKVEGLEIELDVIPVIDFYKFDPWELPEKSFLPKRDLEWFFYCTRDLKYPNGSRTNRATKAGYWKATGKERKIVCRCSSSTITGNCKTLVFYLGRAPLGDRTNWIMQEYRLTDDLSQDSPYFKGGLALCRVIKKNEKSKRVATSSINGSETSMRFSSDVSSQASHLNNGSQNVAPIAEFNHVSIETNPSNFWISPDMILDSSKEYTKVQDALFEYFPPSCESPRQSLEHITTSPTLSYSNFNAENEFSDNVSQNGCMSPYSSSQGNFMDYNGNWDVPYEVYNQINSVSYPEPF*