AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1215960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1215960 MtrunA17_Chr4g0065381 94.108 628 5 1 177 772 56 683 0.0 1205
Msa1215960 MtrunA17_Chr4g0065381 94.828 58 3 0 56 113 1 58 2.76e-29 124
Msa1215960 MtrunA17_Chr2g0305001 65.517 377 97 2 177 520 112 488 5.49e-176 514
Msa1215960 MtrunA17_Chr2g0305001 77.895 95 21 0 19 113 20 114 6.51e-45 169
Msa1215960 MtrunA17_Chr2g0304991 80.709 254 49 0 519 772 15 268 1.01e-147 432
Msa1215960 MtrunA17_Chr2g0326781 31.346 587 304 17 266 771 158 726 1.90e-75 259
Msa1215960 MtrunA17_Chr5g0409581 31.608 541 298 13 274 768 201 715 2.60e-73 253
Msa1215960 MtrunA17_Chr1g0199661 30.427 585 306 16 263 768 133 695 2.13e-72 250
Msa1215960 MtrunA17_Chr4g0033671 43.304 224 121 2 554 771 32 255 1.86e-59 203
Msa1215960 MtrunA17_Chr3g0136741 43.515 239 121 5 543 770 29 264 8.33e-59 201
Msa1215960 MtrunA17_Chr7g0218061 26.531 245 143 8 556 764 294 537 6.43e-14 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1215960 AT5G35180.2 64.882 635 182 6 177 772 146 778 0.0 823
Msa1215960 AT5G35180.1 64.826 634 182 6 177 771 146 777 0.0 821
Msa1215960 AT5G35180.5 64.420 638 182 6 177 771 146 781 0.0 819
Msa1215960 AT5G35180.5 79.545 88 18 0 26 113 61 148 4.40e-43 168
Msa1215960 AT5G35180.4 61.619 667 182 8 177 771 146 810 0.0 797
Msa1215960 AT5G35180.3 57.014 442 149 6 177 579 146 585 7.56e-165 489
Msa1215960 AT2G28320.1 32.308 585 311 14 261 770 161 735 2.69e-81 275
Msa1215960 AT4G19040.3 26.582 790 448 19 27 768 8 713 8.85e-79 268
Msa1215960 AT4G19040.2 26.482 793 448 19 27 768 8 716 2.61e-78 267
Msa1215960 AT4G19040.1 26.523 788 449 19 27 768 8 711 3.21e-78 266
Msa1215960 AT5G45560.2 29.592 588 325 13 235 768 71 623 3.23e-70 243
Msa1215960 AT5G45560.1 29.592 588 325 13 235 768 160 712 1.52e-69 243
Msa1215960 AT3G54800.2 29.861 576 311 14 268 768 173 730 1.90e-69 243
Msa1215960 AT3G54800.1 29.861 576 311 14 268 768 173 730 1.90e-69 243
Msa1215960 AT1G06050.1 46.087 230 117 2 550 772 29 258 4.85e-63 214
Msa1215960 AT5G10750.1 43.162 234 125 3 543 768 39 272 2.62e-57 198
Msa1215960 AT5G25010.1 42.727 220 121 4 554 768 47 266 1.34e-51 182
Msa1215960 AT5G24990.1 42.534 221 121 5 554 768 47 267 6.41e-51 180
Msa1215960 AT5G25020.1 37.727 220 103 5 554 768 48 238 2.39e-38 144

Find 220 sgRNAs with CRISPR-Local

Find 1056 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAACTTACTTCTCCCTTTC+TGG 0.105636 8_1:-77437069 None:intergenic
TGTGAATATCATCAATTATT+TGG 0.143072 8_1:-77435959 None:intergenic
AATGGGTGATTTAATATTTC+TGG 0.179031 8_1:-77451656 None:intergenic
AATGGAAGCATCAGATATTT+TGG 0.198293 8_1:-77443492 None:intergenic
GCCATACCATTGGAGGTTTA+AGG 0.204857 8_1:+77451626 Msa1215960:CDS
GTGTGGGTCACTAGACATTT+TGG 0.213649 8_1:-77442919 None:intergenic
TTCATTGGGTATAGGGATAT+TGG 0.249096 8_1:+77449774 Msa1215960:intron
TTTCTTGTGGGACCCACTTT+TGG 0.271971 8_1:-77435925 None:intergenic
TTACCCAAAGTTGCAGGATT+TGG 0.280619 8_1:+77437521 Msa1215960:CDS
ATGCAGATTGACGTGGATAT+TGG 0.295886 8_1:+77450484 Msa1215960:intron
GCATCCTAGGTGTTTGGTTC+AGG 0.296795 8_1:+77446490 Msa1215960:CDS
GGAACCAAAGCTTGCCTGTT+AGG 0.302377 8_1:+77449815 Msa1215960:CDS
AGTTCCAAATCCTGCAACTT+TGG 0.303251 8_1:-77437525 None:intergenic
AAGTTACAGCTTTCCCTAAC+AGG 0.316730 8_1:-77449829 None:intergenic
AACAAAAGTAACGATTAAAT+TGG 0.319417 8_1:+77452151 Msa1215960:three_prime_UTR
GACACAAACCTCTATCAAAA+TGG 0.323358 8_1:-77450578 None:intergenic
TGCCCTGCATCCTAGGTGTT+TGG 0.325029 8_1:+77446484 Msa1215960:CDS
CAAGTTTCAAACGGTTTAAT+CGG 0.333056 8_1:-77451598 None:intergenic
GGAAAAGGATTTATGATTAG+AGG 0.335637 8_1:+77445921 Msa1215960:CDS
TTGGGTAAAGTTCGCATAGA+TGG 0.361557 8_1:-77437506 None:intergenic
TATAGAACCAAACTGTAGTT+TGG 0.365774 8_1:-77449568 None:intergenic
TTGATGGAAGTGATGTGTTC+CGG 0.366440 8_1:+77449641 Msa1215960:CDS
GTTCCAAATCCTGCAACTTT+GGG 0.368083 8_1:-77437524 None:intergenic
CCAACAACTCCCTTCCTAAT+CGG 0.370291 8_1:-77436771 None:intergenic
TTCATATTCAGAACTGGAAA+TGG 0.375338 8_1:-77443510 None:intergenic
CGAACTTTACCCAAAGTTGC+AGG 0.378552 8_1:+77437515 Msa1215960:CDS
TCCTGATCTAAGCGAAGAAT+TGG 0.380068 8_1:+77445797 Msa1215960:CDS
TTCTAGGTTAAATAGATGTT+TGG 0.390981 8_1:+77452088 Msa1215960:three_prime_UTR
GTGCTACAGCTGGGGAAGCC+CGG 0.391375 8_1:+77438186 Msa1215960:CDS
TTTGTTCTTCCATCGATTCC+AGG 0.393149 8_1:-77442962 None:intergenic
TTGTTCTTTGCAGAATGGTA+AGG 0.394015 8_1:+77441098 Msa1215960:intron
TTAAGCTCATAGCAGTAGAT+TGG 0.399507 8_1:+77446432 Msa1215960:CDS
CCTATGTGCAGAAACCGATT+AGG 0.400153 8_1:+77436757 Msa1215960:intron
TGCTACAGCTGGGGAAGCCC+GGG 0.402315 8_1:+77438187 Msa1215960:CDS
TTCTTGGTGGAGAGCTGGAT+TGG 0.402744 8_1:-77443447 None:intergenic
TTATGACTCAAACTTACAAT+GGG 0.403502 8_1:+77451690 Msa1215960:three_prime_UTR
CAGAAATTTGAACGCACCTA+TGG 0.403827 8_1:+77442885 Msa1215960:CDS
TTCATCTTCATATTCAGAAC+TGG 0.404285 8_1:-77443516 None:intergenic
CTCCATGTTTAGTCTGTCTC+TGG 0.404516 8_1:-77438510 None:intergenic
TGCTAAACCAAACTACAGTT+TGG 0.405130 8_1:+77449561 Msa1215960:CDS
CTGTTGGCTAAGTTTGTTGA+TGG 0.410520 8_1:+77449625 Msa1215960:CDS
GTGTGAGGACTTCTTACCTC+AGG 0.418452 8_1:+77437586 Msa1215960:CDS
TTTCCCTAACAGGCAAGCTT+TGG 0.420695 8_1:-77449819 None:intergenic
CTATCTTAAAGATAATTCTA+AGG 0.422987 8_1:+77445950 Msa1215960:CDS
TATCCTTGTCGTTAATCTGC+AGG 0.423100 8_1:+77448923 Msa1215960:CDS
AGATTAACGACAAGGATAAA+TGG 0.426077 8_1:-77448918 None:intergenic
TTTGAGTCATAATAATGAAA+TGG 0.426830 8_1:-77451679 None:intergenic
TGATGGAAGTGATGTGTTCC+GGG 0.427113 8_1:+77449642 Msa1215960:CDS
TGTTCTGCCCGTGCGTCGCA+CGG 0.428831 8_1:+77451822 Msa1215960:three_prime_UTR
CTCACTATCTTCACCAAAAG+TGG 0.430020 8_1:+77435912 Msa1215960:five_prime_UTR
CCGATTAGGAAGGGAGTTGT+TGG 0.431236 8_1:+77436771 Msa1215960:CDS
GAGCTACCAGAATACATTCT+TGG 0.431854 8_1:+77451569 Msa1215960:CDS
TCGTCGGAGTTGAGCAAATC+GGG 0.435995 8_1:+77436087 Msa1215960:CDS
TGGACTTCTCCTAGTGGAAA+AGG 0.436033 8_1:+77445906 Msa1215960:CDS
AGCTCCTCCACCATTAGTGT+GGG 0.439748 8_1:-77436795 None:intergenic
CAGCTGGGGAAGCCCGGGGA+TGG 0.444191 8_1:+77438192 Msa1215960:CDS
TCCAATTCTTCGCTTAGATC+AGG 0.446909 8_1:-77445798 None:intergenic
ATAGAATTGCCCTGCATCCT+AGG 0.447409 8_1:+77446477 Msa1215960:CDS
ACAGTTCCAAGAATGTATTC+TGG 0.448564 8_1:-77451575 None:intergenic
GAGAAGACAAAATCCTGCTT+TGG 0.454518 8_1:-77442104 None:intergenic
AGTTGTTGGCCCCACACTAA+TGG 0.454665 8_1:+77436785 Msa1215960:CDS
TTCTCTCGTCAATGGTTTCG+TGG 0.457489 8_1:+77442122 Msa1215960:CDS
AGTTGGCTGGTAGGCCAGAC+AGG 0.458660 8_1:+77439400 Msa1215960:CDS
AAACTGTAGTTTGGTTTAGC+AGG 0.459208 8_1:-77449559 None:intergenic
ATTTGATCATGCCAAGCAAC+AGG 0.460192 8_1:+77438223 Msa1215960:CDS
TCAAACTAAAGAATGTTTCA+TGG 0.461930 8_1:+77443772 Msa1215960:CDS
TGGAGATACATTCTGAATCC+TGG 0.465453 8_1:+77442944 Msa1215960:CDS
CTATCCCCTTCAAACCTGTC+TGG 0.466568 8_1:-77439414 None:intergenic
TGAATCTGCCATACCATTGG+AGG 0.466969 8_1:+77451619 Msa1215960:CDS
ATGAGGATCGCGCTTGTACA+TGG 0.467319 8_1:-77436223 None:intergenic
TCGCATACCTCAACTATACT+TGG 0.467845 8_1:-77449685 None:intergenic
AAGATTGCTTGTGCTACAGC+TGG 0.468677 8_1:+77438176 Msa1215960:intron
GACAGGTTTGAAGGGGATAG+TGG 0.470480 8_1:+77439417 Msa1215960:CDS
GAACCAAAGCTTGCCTGTTA+GGG 0.471550 8_1:+77449816 Msa1215960:CDS
GAACCAAACACCTAGGATGC+AGG 0.472343 8_1:-77446487 None:intergenic
AAATAATGGTTCAGGTCTAA+AGG 0.472794 8_1:+77443412 Msa1215960:intron
CGTCGATAACCAGATCTTTG+AGG 0.474516 8_1:-77442643 None:intergenic
GGTAGGCCAGACAGGTTTGA+AGG 0.477074 8_1:+77439408 Msa1215960:CDS
AAAGAACCATGTATGTCGTT+TGG 0.480885 8_1:-77445849 None:intergenic
TGGGCATACCGCCTCACTCT+AGG 0.482620 8_1:-77439014 None:intergenic
GATTGCCGTAACAATGTCTC+CGG 0.483434 8_1:-77439372 None:intergenic
TTAGTAGAACATACAATGGC+AGG 0.484334 8_1:-77436252 None:intergenic
TGGTTCTTTGCGCAAAGGAA+TGG 0.487425 8_1:+77445863 Msa1215960:CDS
GTTACGGCAATCATCAAAGT+TGG 0.488734 8_1:+77439383 Msa1215960:CDS
TGGGGAAGCCCGGGGATGGA+TGG 0.489574 8_1:+77438196 Msa1215960:CDS
TCGATTAGATGAGGCCAGAA+AGG 0.490102 8_1:+77437055 Msa1215960:CDS
TGTTCTTTGCAGAATGGTAA+GGG 0.491837 8_1:+77441099 Msa1215960:intron
GTCGTCGGAGTTGAGCAAAT+CGG 0.492783 8_1:+77436086 Msa1215960:CDS
GCGATGGACGCAATTGCAGC+AGG 0.494054 8_1:+77436057 Msa1215960:exon
GTTCTGCCCGTGCGTCGCAC+GGG 0.494080 8_1:+77451823 Msa1215960:three_prime_UTR
ATTATGACTCAAACTTACAA+TGG 0.495194 8_1:+77451689 Msa1215960:three_prime_UTR
TTCTGGCTGTAGCATCTACA+TGG 0.500081 8_1:+77442857 Msa1215960:intron
CACTTAGGAGTCAATTCCAT+TGG 0.500435 8_1:+77436150 Msa1215960:CDS
GAAGAATAAGTGATTAAGTG+TGG 0.502008 8_1:+77436022 Msa1215960:five_prime_UTR
ACCCAGGTGGCATCCAAAGC+AGG 0.504924 8_1:+77442091 Msa1215960:intron
TTTGGAAGGATCAATCTTGA+AGG 0.505605 8_1:+77438984 Msa1215960:intron
TGGATGGTTAAGAGAGCAGT+TGG 0.506209 8_1:+77449794 Msa1215960:CDS
ATACTGAATAAAATCAAGTA+CGG 0.506473 8_1:-77451778 None:intergenic
ATGACAATGACACAAATTGT+TGG 0.508547 8_1:+77445886 Msa1215960:CDS
TGCAGTTCGCTTCAAAGCTA+AGG 0.510251 8_1:-77443805 None:intergenic
CAAGGATGTTTCTGATCACA+AGG 0.511071 8_1:+77440326 Msa1215960:CDS
CTGCCCGTGCGTCGCACGGG+TGG 0.512225 8_1:+77451826 Msa1215960:three_prime_UTR
TCTGTAGCTAGAGGTGTCAT+TGG 0.514707 8_1:+77450514 Msa1215960:CDS
TGATGAGAAGCATGATCAAA+AGG 0.514745 8_1:+77443604 Msa1215960:CDS
AAAATTGTCATGCAGGTAGT+TGG 0.515602 8_1:+77446395 Msa1215960:intron
AACCATGTATGTCGTTTGGA+TGG 0.515607 8_1:-77445845 None:intergenic
CAATGGTTTCGTGGACAAGA+TGG 0.518901 8_1:+77442131 Msa1215960:CDS
CAAATGCTTCCATCCATCCC+CGG 0.520261 8_1:-77438205 None:intergenic
GGTGTCATTGGCCTTGTGCT+AGG 0.520532 8_1:+77450526 Msa1215960:CDS
CGGAGAGAAGTAGCTTCGGT+TGG 0.520719 8_1:+77436121 Msa1215960:CDS
TAGCTCCTCCACCATTAGTG+TGG 0.521419 8_1:-77436796 None:intergenic
GTCATAATAATGAAATGGAA+TGG 0.522418 8_1:-77451674 None:intergenic
ACACAGTTGAAGCACATCAA+TGG 0.523646 8_1:+77439442 Msa1215960:CDS
ACACTAATGGTGGAGGAGCT+AGG 0.526606 8_1:+77436798 Msa1215960:CDS
TCCTCACACAAGCATTGACT+TGG 0.528793 8_1:-77437572 None:intergenic
TGGCAGATTCAAGTTTCAAA+CGG 0.531155 8_1:-77451607 None:intergenic
TGTGAGGACTTCTTACCTCA+GGG 0.531438 8_1:+77437587 Msa1215960:CDS
TCATAATAATGAAATGGAAT+GGG 0.531798 8_1:-77451673 None:intergenic
ACATTACTGTGCCTAGTGGC+AGG 0.532442 8_1:+77443018 Msa1215960:CDS
AAGCGAAGAATTGGATCCTC+GGG 0.532728 8_1:+77445806 Msa1215960:CDS
TTTCCACCCGTGCGACGCAC+GGG 0.534713 8_1:-77451829 None:intergenic
TTAGCTTTGAAGCGAACTGC+AGG 0.534732 8_1:+77443807 Msa1215960:CDS
GTGGGTGTTCGTGCGTGCGA+TGG 0.534813 8_1:+77436041 Msa1215960:exon
ACTTGAATCTGCCATACCAT+TGG 0.535494 8_1:+77451616 Msa1215960:CDS
AGAAATTTGAACGCACCTAT+GGG 0.535993 8_1:+77442886 Msa1215960:CDS
TACTGAATAAAATCAAGTAC+GGG 0.539274 8_1:-77451777 None:intergenic
AGATTGCTTGTGCTACAGCT+GGG 0.539636 8_1:+77438177 Msa1215960:intron
TTATTAGCTTCCTTAGTCCG+TGG 0.541837 8_1:-77439034 None:intergenic
ATTCTGAATCCTGGAATCGA+TGG 0.544859 8_1:+77442953 Msa1215960:CDS
ATGTCTAGTGACCCACACTT+TGG 0.546309 8_1:+77442924 Msa1215960:CDS
CGGCAATCATCAAAGTTGGC+TGG 0.546492 8_1:+77439387 Msa1215960:CDS
CGATTAGATGAGGCCAGAAA+GGG 0.546785 8_1:+77437056 Msa1215960:CDS
TATTAGCTTCCTTAGTCCGT+GGG 0.547587 8_1:-77439033 None:intergenic
ACCTTAAACCTCCAATGGTA+TGG 0.548721 8_1:-77451627 None:intergenic
GGAATCGATGGAAGAACAAA+CGG 0.551652 8_1:+77442965 Msa1215960:CDS
ACTAGGCACAGTAATGTGTA+AGG 0.551782 8_1:-77443012 None:intergenic
GGATCGGAGAGAAGTAGCTT+CGG 0.552381 8_1:+77436117 Msa1215960:CDS
GTCGCCGAAAAGTCAACGAT+GGG 0.554061 8_1:+77436820 Msa1215960:CDS
CAAACTAAAGAATGTTTCAT+GGG 0.556903 8_1:+77443773 Msa1215960:CDS
TCGTTTGGATGGATTGTGGT+AGG 0.557010 8_1:-77445834 None:intergenic
GGAGAGAAGTAGCTTCGGTT+GGG 0.560979 8_1:+77436122 Msa1215960:CDS
GGCTGCTGAATCATCGTCAT+CGG 0.563001 8_1:+77443565 Msa1215960:CDS
ATGACAATACTGACGACCAA+TGG 0.563811 8_1:-77436166 None:intergenic
GAAGCAGAAGCAGAAGCAGA+GGG 0.565391 8_1:+77435991 Msa1215960:five_prime_UTR
AAATGCTTCCATCCATCCCC+GGG 0.565648 8_1:-77438204 None:intergenic
ATTGTCATGCAGGTAGTTGG+CGG 0.566510 8_1:+77446398 Msa1215960:intron
TTGAGCAAATCGGGTAGCAA+AGG 0.567129 8_1:+77436096 Msa1215960:CDS
TAAGCGAAGAATTGGATCCT+CGG 0.567526 8_1:+77445805 Msa1215960:CDS
TTCGGTTGGGTATATCACTT+AGG 0.568294 8_1:+77436135 Msa1215960:CDS
AGAAGCAGAAGCAGAAGCAG+AGG 0.568644 8_1:+77435990 Msa1215960:five_prime_UTR
AAATGGCAAGGTCAACGACT+AGG 0.570517 8_1:-77450561 None:intergenic
TAAGTTTGAATCTCGAGTCC+CGG 0.570533 8_1:-77449660 None:intergenic
TTGGGTATAGGGATATTGGA+TGG 0.572635 8_1:+77449778 Msa1215960:intron
CAGAATGTATCTCCAAAGTG+TGG 0.577263 8_1:-77442936 None:intergenic
ATCCATCCAAACGACATACA+TGG 0.577358 8_1:+77445843 Msa1215960:CDS
TGCAGCAGGTTCATCGTCGT+CGG 0.578050 8_1:+77436071 Msa1215960:CDS
GTAGGCCAGACAGGTTTGAA+GGG 0.579618 8_1:+77439409 Msa1215960:CDS
AAGAATAAGTGATTAAGTGT+GGG 0.579947 8_1:+77436023 Msa1215960:five_prime_UTR
AAATGTGTCCATACTGTGGC+TGG 0.582014 8_1:+77439465 Msa1215960:CDS
CAAATACTTAACCTGCCACT+AGG 0.585853 8_1:-77443029 None:intergenic
AATCATCAAAGTTGGCTGGT+AGG 0.587835 8_1:+77439391 Msa1215960:CDS
TGCCAGAGACAGACTAAACA+TGG 0.594024 8_1:+77438508 Msa1215960:CDS
ACCACTTGACAATTCATACT+CGG 0.594026 8_1:-77438480 None:intergenic
TTTGGGCTATTTGATCCCAT+AGG 0.594534 8_1:-77442901 None:intergenic
ATTGAAAACACCTTGTGGCA+AGG 0.595455 8_1:+77437549 Msa1215960:CDS
TTGTATTATGCAGATTGACG+TGG 0.600471 8_1:+77450477 Msa1215960:intron
AACCAAACACCTAGGATGCA+GGG 0.602158 8_1:-77446486 None:intergenic
ATACATGGTTCTTTGCGCAA+AGG 0.602393 8_1:+77445858 Msa1215960:CDS
ATATTTGCAGGCAAAAGAAG+AGG 0.604425 8_1:+77451544 Msa1215960:intron
TGGCCCCACACTAATGGTGG+AGG 0.605263 8_1:+77436791 Msa1215960:CDS
ACTTATTCCAAGTATAGTTG+AGG 0.606270 8_1:+77449678 Msa1215960:CDS
TGTGCAGAAACCGATTAGGA+AGG 0.609190 8_1:+77436761 Msa1215960:intron
AGAGTGAGGCGGTATGCCCA+CGG 0.609484 8_1:+77439017 Msa1215960:CDS
TAGTAGAACATACAATGGCA+GGG 0.609987 8_1:-77436251 None:intergenic
AAGGCCCGGAGACATTGTTA+CGG 0.613876 8_1:+77439367 Msa1215960:intron
TAAACGATGTGCACACCACA+CGG 0.614311 8_1:+77451947 Msa1215960:three_prime_UTR
TCACTATCTTCACCAAAAGT+GGG 0.615102 8_1:+77435913 Msa1215960:five_prime_UTR
ATTGACTTGGCCTTGCCACA+AGG 0.615162 8_1:-77437559 None:intergenic
TCGTCATCGGATGAAGAAAG+TGG 0.615182 8_1:+77443578 Msa1215960:CDS
AGAACACCTTAAACCTCCAA+TGG 0.617374 8_1:-77451632 None:intergenic
GCTACAGCTGGGGAAGCCCG+GGG 0.621557 8_1:+77438188 Msa1215960:CDS
ATTGCCGTAACAATGTCTCC+GGG 0.622454 8_1:-77439371 None:intergenic
AAGGACATCGGCCTAGAGTG+AGG 0.622481 8_1:+77439003 Msa1215960:CDS
GGATCAATCTTGAAGGACAT+CGG 0.623320 8_1:+77438991 Msa1215960:intron
TCTGAATTTCAGTCAGAAGT+CGG 0.623960 8_1:+77448885 Msa1215960:intron
GGTGTCCTTGCAAAATCTGT+CGG 0.624906 8_1:+77441120 Msa1215960:CDS
GTGCAGAAACCGATTAGGAA+GGG 0.625948 8_1:+77436762 Msa1215960:intron
AGAATGTATCTCCAAAGTGT+GGG 0.625962 8_1:-77442935 None:intergenic
AACTCATTGAAAACACCTTG+TGG 0.628444 8_1:+77437544 Msa1215960:CDS
GGATCATCCTCTGTAGCTAG+AGG 0.630431 8_1:+77450505 Msa1215960:CDS
TGTTGGCCCCACACTAATGG+TGG 0.633247 8_1:+77436788 Msa1215960:CDS
ATATTAACGAATTACAACAC+TGG 0.634426 8_1:-77437419 None:intergenic
CAAATCGGGTAGCAAAGGAT+CGG 0.634849 8_1:+77436101 Msa1215960:CDS
GCTCCTCCACCATTAGTGTG+GGG 0.635931 8_1:-77436794 None:intergenic
ACTGCTATGAGCTTAAGAAG+AGG 0.638290 8_1:-77446425 None:intergenic
GGTCGCCGAAAAGTCAACGA+TGG 0.641439 8_1:+77436819 Msa1215960:CDS
ACAAGATGAGACACTCATTG+TGG 0.642752 8_1:-77437466 None:intergenic
GAGTATGAATTGTCAAGTGG+TGG 0.645004 8_1:+77438482 Msa1215960:CDS
GCCAAGTCAATGCTTGTGTG+AGG 0.646389 8_1:+77437571 Msa1215960:CDS
GATTGCTTGTGCTACAGCTG+GGG 0.647664 8_1:+77438178 Msa1215960:intron
AATGACACCTCTAGCTACAG+AGG 0.648340 8_1:-77450512 None:intergenic
AATTGTTGGACTTCTCCTAG+TGG 0.657811 8_1:+77445900 Msa1215960:CDS
GTTACCTGAACCAAACACCT+AGG 0.659309 8_1:-77446494 None:intergenic
GCCGAGTATGAATTGTCAAG+TGG 0.660670 8_1:+77438479 Msa1215960:CDS
TTTGGAGTGAACTATTGTGG+TGG 0.668425 8_1:-77443474 None:intergenic
TTGTAACATATCCTAGCACA+AGG 0.670543 8_1:-77450537 None:intergenic
TAGGCCAGACAGGTTTGAAG+GGG 0.671925 8_1:+77439410 Msa1215960:CDS
AAACCTCTATCAAAATGGCA+AGG 0.680546 8_1:-77450573 None:intergenic
ATCATGTGTCATGTAGAATG+TGG 0.688878 8_1:-77451878 None:intergenic
TTACACATTACTGTGCCTAG+TGG 0.689398 8_1:+77443014 Msa1215960:CDS
TATGTCGTTTGGATGGATTG+TGG 0.689644 8_1:-77445838 None:intergenic
ATACCTGCAGATTAACGACA+AGG 0.700529 8_1:-77448926 None:intergenic
TCTGGCTGTAGCATCTACAT+GGG 0.707860 8_1:+77442858 Msa1215960:intron
GACATCGGCCTAGAGTGAGG+CGG 0.708878 8_1:+77439006 Msa1215960:CDS
TATGACTCAAACTTACAATG+GGG 0.709821 8_1:+77451691 Msa1215960:three_prime_UTR
ATGGAAATGTGTCCATACTG+TGG 0.733893 8_1:+77439461 Msa1215960:CDS
TCGCCGAAAAGTCAACGATG+GGG 0.736973 8_1:+77436821 Msa1215960:CDS
TTCTACGCTTTGTGTCCGTG+TGG 0.741644 8_1:-77451962 None:intergenic
CAGAGACAGACTAAACATGG+AGG 0.757709 8_1:+77438511 Msa1215960:CDS
ATTGTGGTAGGAGTGACCCG+AGG 0.777433 8_1:-77445822 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATAAATGAATTTTTTTTAA+TGG - chr8_1:77439881-77439900 None:intergenic 10.0%
!! TTAAAAAAAATTCATTTATC+TGG + chr8_1:77439881-77439900 Msa1215960:intron 10.0%
!! TGTATAAAAATTTACTTATT+TGG + chr8_1:77440351-77440370 Msa1215960:intron 10.0%
!! GTATAAAAATTTACTTATTT+GGG + chr8_1:77440352-77440371 Msa1215960:intron 10.0%
!! AAAAAAAAATCTATGAAAAT+TGG - chr8_1:77441359-77441378 None:intergenic 10.0%
!! TCATATAAATATAGTAAATA+AGG - chr8_1:77442330-77442349 None:intergenic 10.0%
!!! TTTTTATAAACAATAGAAAT+AGG - chr8_1:77442366-77442385 None:intergenic 10.0%
!!! TTATTAATTTATGATTTTCT+TGG + chr8_1:77444412-77444431 Msa1215960:intron 10.0%
!!! TATTAATTTATGATTTTCTT+GGG + chr8_1:77444413-77444432 Msa1215960:intron 10.0%
!!! ATTTATTTTTAAGTTGTAAA+TGG - chr8_1:77445267-77445286 None:intergenic 10.0%
!! TTAAAAATAAATATTAGAGA+AGG + chr8_1:77445275-77445294 Msa1215960:intron 10.0%
!!! TTTATTTATTTTCACTATTT+AGG - chr8_1:77445673-77445692 None:intergenic 10.0%
!!! AACAAAACTTTTTTAAAAAA+GGG + chr8_1:77446014-77446033 Msa1215960:intron 10.0%
!! CAATAATTTAATGTAAAAAT+TGG + chr8_1:77446679-77446698 Msa1215960:intron 10.0%
!! AAAAATGCAAAAAAAAAAAA+AGG - chr8_1:77448262-77448281 None:intergenic 10.0%
!! ATATTATAAATTTCAAATCC+AGG - chr8_1:77437949-77437968 None:intergenic 15.0%
!!! ACAATTAAATATTTTTGTTC+AGG + chr8_1:77438819-77438838 Msa1215960:intron 15.0%
!! ATGATAAATCATCTATTAAA+AGG - chr8_1:77438937-77438956 None:intergenic 15.0%
!!! TGTTTTTAGAATTTTTACAT+TGG + chr8_1:77439134-77439153 Msa1215960:intron 15.0%
!!! TTCTGTGTTATTTATATTTA+TGG + chr8_1:77439236-77439255 Msa1215960:intron 15.0%
!! ATTTAGTTATGTAATTACAA+AGG + chr8_1:77439654-77439673 Msa1215960:intron 15.0%
!!! AAAAATTTCTTGAGAATTTT+CGG + chr8_1:77441225-77441244 Msa1215960:intron 15.0%
!! TTCAAATATTGTATAGAAAA+TGG - chr8_1:77441441-77441460 None:intergenic 15.0%
!!! TTAAAATTTGTATTTTTTGC+AGG + chr8_1:77441551-77441570 Msa1215960:intron 15.0%
!! AAACAAATTAATAACACAAT+AGG - chr8_1:77442020-77442039 None:intergenic 15.0%
!! CATATACAATAATAAATACA+AGG + chr8_1:77443316-77443335 Msa1215960:intron 15.0%
!! AAATAGATGATGTAAAATAA+TGG + chr8_1:77443398-77443417 Msa1215960:intron 15.0%
!! TCTAAATTAATAAATTTCTC+TGG - chr8_1:77444127-77444146 None:intergenic 15.0%
!!! AGTTTTTCAATTTTTTACAT+TGG + chr8_1:77444489-77444508 Msa1215960:intron 15.0%
!!! TCTAAAATAATAAATTTGTC+CGG - chr8_1:77444527-77444546 None:intergenic 15.0%
!! AAACTCTTTAAATTAATACT+CGG - chr8_1:77444565-77444584 None:intergenic 15.0%
!! TCTAGTATTTGAAAAAATAT+AGG - chr8_1:77444727-77444746 None:intergenic 15.0%
!! CTTCATAATATTTGTATAAA+AGG - chr8_1:77445171-77445190 None:intergenic 15.0%
!!! CAACAAAACTTTTTTAAAAA+AGG + chr8_1:77446013-77446032 Msa1215960:intron 15.0%
!! ATTACAAAGAATATAGATAA+CGG - chr8_1:77446093-77446112 None:intergenic 15.0%
!!! AGATAATAAATACATTTTGT+TGG - chr8_1:77447561-77447580 None:intergenic 15.0%
!! TGTATTTATTATCTCAAATA+AGG + chr8_1:77447567-77447586 Msa1215960:intron 15.0%
!! CAAAAATATAACAGTATATT+GGG - chr8_1:77447937-77447956 None:intergenic 15.0%
!! ACAAAAATATAACAGTATAT+TGG - chr8_1:77447938-77447957 None:intergenic 15.0%
!!! AAAAAACTATTTGATAATCA+AGG - chr8_1:77449056-77449075 None:intergenic 15.0%
!!! TATCAAATAGTTTTTTGAAA+TGG + chr8_1:77449060-77449079 Msa1215960:intron 15.0%
!!! AGATTGATTTTCATTTTTTT+TGG + chr8_1:77449265-77449284 Msa1215960:intron 15.0%
!!! GATTGATTTTCATTTTTTTT+GGG + chr8_1:77449266-77449285 Msa1215960:intron 15.0%
!!! AACAGAGATTTTTTATTTAT+TGG - chr8_1:77449610-77449629 None:intergenic 15.0%
!! AATAAATAAAAAATCTCTGT+TGG + chr8_1:77449609-77449628 Msa1215960:CDS 15.0%
!!! ATAAATATCAGCTTAATTTT+AGG + chr8_1:77450220-77450239 Msa1215960:intron 15.0%
!!! AAAACATAATTTCTTTTTGT+AGG - chr8_1:77451018-77451037 None:intergenic 15.0%
!! TTGTATTTATAACATAGTTA+TGG - chr8_1:77451234-77451253 None:intergenic 15.0%
!! CTATGTTATAAATACAAAAA+AGG + chr8_1:77451237-77451256 Msa1215960:intron 15.0%
!!! GAAATTGACTATATTTTTTA+GGG - chr8_1:77452115-77452134 None:intergenic 15.0%
!!! GCTTTATTTATTTTTCTTGT+GGG - chr8_1:77435940-77435959 None:intergenic 20.0%
!! TGTGAATATCATCAATTATT+TGG - chr8_1:77435962-77435981 None:intergenic 20.0%
!!! AAATTAAAGCATTAATCAGT+GGG - chr8_1:77436383-77436402 None:intergenic 20.0%
!! CATTTCATTTCTAAATTTGA+TGG + chr8_1:77436974-77436993 Msa1215960:intron 20.0%
!!! AAATATAAAACAGAAGCATA+AGG + chr8_1:77437227-77437246 Msa1215960:intron 20.0%
!! TAGGAAGAAAAATAACAATT+TGG - chr8_1:77437781-77437800 None:intergenic 20.0%
!!! GTTGTAAGTTTTTTTTTACT+AGG - chr8_1:77437800-77437819 None:intergenic 20.0%
!!! TACGTACAATTTTAATTTAC+TGG + chr8_1:77438439-77438458 Msa1215960:intron 20.0%
!! TGATATAATAGCATTAGTTA+AGG + chr8_1:77438582-77438601 Msa1215960:intron 20.0%
!! GATTGGTAAATGATTAATAA+TGG + chr8_1:77438632-77438651 Msa1215960:intron 20.0%
!! TTTATATCATACATGTTAGT+AGG + chr8_1:77438687-77438706 Msa1215960:intron 20.0%
!! TTATATCATACATGTTAGTA+GGG + chr8_1:77438688-77438707 Msa1215960:intron 20.0%
!!! CAAGATCAATGATAATTTTA+AGG + chr8_1:77438786-77438805 Msa1215960:intron 20.0%
!!! GTGTTATTTATATTTATGGA+AGG + chr8_1:77439240-77439259 Msa1215960:intron 20.0%
!!! TCTTATTCTATCTTTTTGAA+AGG + chr8_1:77439348-77439367 Msa1215960:intron 20.0%
!! GTCTATATAAACTGTTATAA+AGG + chr8_1:77439614-77439633 Msa1215960:intron 20.0%
!! AAGTAATCGTGAAAAATTAA+AGG - chr8_1:77439718-77439737 None:intergenic 20.0%
!! TAAACTAATAATAGTACTCT+AGG + chr8_1:77439782-77439801 Msa1215960:intron 20.0%
!! AAACTAATAATAGTACTCTA+GGG + chr8_1:77439783-77439802 Msa1215960:intron 20.0%
!!! TAAGCAAAAAGTAACTTTTT+AGG + chr8_1:77439975-77439994 Msa1215960:intron 20.0%
!! CATTCAATAAATAATGTATC+TGG - chr8_1:77440038-77440057 None:intergenic 20.0%
!!! TAAGCAAAAAGTAACTTTTT+AGG - chr8_1:77439975-77439994 None:intergenic 20.0%
!! TAAAAATTTACTTATTTGGG+TGG + chr8_1:77440355-77440374 Msa1215960:intron 20.0%
!! AAAAATTTACTTATTTGGGT+GGG + chr8_1:77440356-77440375 Msa1215960:intron 20.0%
!!! TATTTTTCCACAATGTTAAT+AGG + chr8_1:77440971-77440990 Msa1215960:intron 20.0%
!!! TTTAAAGCAATAAAGATTAG+TGG + chr8_1:77441032-77441051 Msa1215960:intron 20.0%
!!! AATTCTCAAGAAATTTTTAG+AGG - chr8_1:77441223-77441242 None:intergenic 20.0%
!! GTAACTTATTAGGAAAATTA+TGG + chr8_1:77441247-77441266 Msa1215960:intron 20.0%
!! TTAATAGTGAAAATGAGAAA+TGG - chr8_1:77441305-77441324 None:intergenic 20.0%
!!! GTAAAACAAAATGACATTTT+TGG - chr8_1:77441331-77441350 None:intergenic 20.0%
!! TTCAAATATTGTATAGGAAA+TGG - chr8_1:77441384-77441403 None:intergenic 20.0%
!!! CCTATTTTCAAATATTGTAT+AGG - chr8_1:77441390-77441409 None:intergenic 20.0%
!! CCTATACAATATTTGAAAAT+AGG + chr8_1:77441387-77441406 Msa1215960:intron 20.0%
!! TCTATACAATATTTGAAAAC+AGG + chr8_1:77441444-77441463 Msa1215960:intron 20.0%
!! AAATTAATAACACAATAGGA+GGG - chr8_1:77442016-77442035 None:intergenic 20.0%
!! GTGTGTATTACATAATAAAT+AGG + chr8_1:77442291-77442310 Msa1215960:intron 20.0%
!! TTATAAACAATAGAAATAGG+TGG - chr8_1:77442363-77442382 None:intergenic 20.0%
!! AACTCTAAATTAATAATGTC+AGG + chr8_1:77444100-77444119 Msa1215960:intron 20.0%
!!! TAATGACTTTTGAACTTTAA+AGG + chr8_1:77444324-77444343 Msa1215960:intron 20.0%
!!! TTTTGAGATAGTAGTTATTT+AGG + chr8_1:77444605-77444624 Msa1215960:intron 20.0%
!!! TTTGAGATAGTAGTTATTTA+GGG + chr8_1:77444606-77444625 Msa1215960:intron 20.0%
!! TTAATGTTAATCTGTTACAA+AGG + chr8_1:77444842-77444861 Msa1215960:intron 20.0%
!! TAACTTCAGTTAAGAATAAT+GGG - chr8_1:77445239-77445258 None:intergenic 20.0%
!! TTAACTTCAGTTAAGAATAA+TGG - chr8_1:77445240-77445259 None:intergenic 20.0%
!! TGAAAGCAATGAAAATATTT+AGG - chr8_1:77445356-77445375 None:intergenic 20.0%
!!! ATTTTCAATTTTCCCTTTAT+AGG - chr8_1:77445463-77445482 None:intergenic 20.0%
!!! ATTTATTTTCACTATTTAGG+TGG - chr8_1:77445670-77445689 None:intergenic 20.0%
!! CTTAATTTCATGATTTCATT+CGG + chr8_1:77445738-77445757 Msa1215960:intron 20.0%
!! CTATCTTAAAGATAATTCTA+AGG + chr8_1:77445950-77445969 Msa1215960:CDS 20.0%
!! GTTATCTATATTCTTTGTAA+TGG + chr8_1:77446092-77446111 Msa1215960:intron 20.0%
!! ATAAGAATTTGCAAGAAAAA+GGG - chr8_1:77446152-77446171 None:intergenic 20.0%
!! TATAAGAATTTGCAAGAAAA+AGG - chr8_1:77446153-77446172 None:intergenic 20.0%
!!! ACAATTTTTGTTAATGACAA+TGG - chr8_1:77446383-77446402 None:intergenic 20.0%
!! ATATCATTGTAAAGTATAGT+TGG + chr8_1:77446555-77446574 Msa1215960:intron 20.0%
!! TATCATTGTAAAGTATAGTT+GGG + chr8_1:77446556-77446575 Msa1215960:intron 20.0%
!! TAAAATAAAACTGATACCAA+TGG - chr8_1:77447062-77447081 None:intergenic 20.0%
!! TTATCTCAAATAAGGTTATA+AGG + chr8_1:77447575-77447594 Msa1215960:intron 20.0%
!! GAATATCAAATTTCAGAAAT+CGG + chr8_1:77448143-77448162 Msa1215960:intron 20.0%
!! AAACTAATTGAAAGTTAGTT+AGG + chr8_1:77448446-77448465 Msa1215960:intron 20.0%
!! GAAATAAAACAGCATTATTT+AGG - chr8_1:77448751-77448770 None:intergenic 20.0%
!! GAAAATAAAGGATAAAAACT+GGG - chr8_1:77449338-77449357 None:intergenic 20.0%
!! AGAAAATAAAGGATAAAAAC+TGG - chr8_1:77449339-77449358 None:intergenic 20.0%
!! TCTTCATATATTCAATTATC+AGG + chr8_1:77449534-77449553 Msa1215960:intron 20.0%
!!! AGTAGCTAATATTTTTCATT+GGG + chr8_1:77449760-77449779 Msa1215960:intron 20.0%
!!! TAATATTTTTCATTGGGTAT+AGG + chr8_1:77449766-77449785 Msa1215960:intron 20.0%
!!! AATATTTTTCATTGGGTATA+GGG + chr8_1:77449767-77449786 Msa1215960:intron 20.0%
!! TATAAATTGTTACACTTACT+AGG + chr8_1:77450016-77450035 Msa1215960:intron 20.0%
!! CAAAAAAAATTACATCTTCA+AGG + chr8_1:77450447-77450466 Msa1215960:intron 20.0%
!! AATATCAAGTCTATATCAAA+AGG - chr8_1:77450650-77450669 None:intergenic 20.0%
!! TTTGATATAGACTTGATATT+TGG + chr8_1:77450650-77450669 Msa1215960:intron 20.0%
!! TTTATATATGATTATGAGCT+TGG - chr8_1:77450821-77450840 None:intergenic 20.0%
!! AAGCTCATAATCATATATAA+AGG + chr8_1:77450820-77450839 Msa1215960:intron 20.0%
!! AGCTCATAATCATATATAAA+GGG + chr8_1:77450821-77450840 Msa1215960:intron 20.0%
!!! GGATATAATTTGTAAAGAAA+AGG - chr8_1:77450908-77450927 None:intergenic 20.0%
!! TACTATACATATTATGATGA+CGG - chr8_1:77450929-77450948 None:intergenic 20.0%
!!! AACATTTTCCATCTTTTATT+CGG + chr8_1:77451139-77451158 Msa1215960:intron 20.0%
!! AGAAAAAAAAAACGTAGTTA+TGG - chr8_1:77451202-77451221 None:intergenic 20.0%
!! TATAACATAGTTATGGTATT+TGG - chr8_1:77451227-77451246 None:intergenic 20.0%
!! ATCAAATCCTAAATATTTCT+AGG + chr8_1:77451273-77451292 Msa1215960:intron 20.0%
!! TCATAATAATGAAATGGAAT+GGG - chr8_1:77451676-77451695 None:intergenic 20.0%
!! TTTGAGTCATAATAATGAAA+TGG - chr8_1:77451682-77451701 None:intergenic 20.0%
!! ATACTGAATAAAATCAAGTA+CGG - chr8_1:77451781-77451800 None:intergenic 20.0%
!!! CGAAATTGACTATATTTTTT+AGG - chr8_1:77452116-77452135 None:intergenic 20.0%
!!! GGCTTTATTTATTTTTCTTG+TGG - chr8_1:77435941-77435960 None:intergenic 25.0%
! AAGAATAAGTGATTAAGTGT+GGG + chr8_1:77436023-77436042 Msa1215960:five_prime_UTR 25.0%
! TGAATTAGTAGAACATACAA+TGG - chr8_1:77436259-77436278 None:intergenic 25.0%
! AATGTAATTAAGAGTAGAGT+AGG - chr8_1:77436289-77436308 None:intergenic 25.0%
!!! ATCTGAAACAAACACTTTTT+TGG - chr8_1:77436331-77436350 None:intergenic 25.0%
!! AATTAAAGCATTAATCAGTG+GGG - chr8_1:77436382-77436401 None:intergenic 25.0%
!! GAAATTAAAGCATTAATCAG+TGG - chr8_1:77436384-77436403 None:intergenic 25.0%
! AACATACAATCAGTTTAGTT+TGG - chr8_1:77436880-77436899 None:intergenic 25.0%
!! TGATTGTATGTTCATTTTGA+TGG + chr8_1:77436888-77436907 Msa1215960:intron 25.0%
!!! TATGTTCATTTTGATGGAAA+TGG + chr8_1:77436894-77436913 Msa1215960:intron 25.0%
!!! GGAACAATATCTTTTGATTT+GGG + chr8_1:77436936-77436955 Msa1215960:intron 25.0%
! TTTAACCTGAAAAATGCAAT+GGG - chr8_1:77437397-77437416 None:intergenic 25.0%
! ATTTAACCTGAAAAATGCAA+TGG - chr8_1:77437398-77437417 None:intergenic 25.0%
! ATATTAACGAATTACAACAC+TGG - chr8_1:77437422-77437441 None:intergenic 25.0%
! ACAGCACAATATCAAATTAA+TGG + chr8_1:77437638-77437657 Msa1215960:intron 25.0%
! CAGCACAATATCAAATTAAT+GGG + chr8_1:77437639-77437658 Msa1215960:intron 25.0%
! AGAAAAATAACAATTTGGAG+TGG - chr8_1:77437776-77437795 None:intergenic 25.0%
! AACAAGTGTGGTAATATTTA+TGG - chr8_1:77437893-77437912 None:intergenic 25.0%
! AACTGTATCAAACCTTTAAA+CGG - chr8_1:77437993-77438012 None:intergenic 25.0%
!! TCCCATTACAAAATTTTCTA+TGG + chr8_1:77438353-77438372 Msa1215960:intron 25.0%
!! GCCATAGAAAATTTTGTAAT+GGG - chr8_1:77438357-77438376 None:intergenic 25.0%
!! AGCCATAGAAAATTTTGTAA+TGG - chr8_1:77438358-77438377 None:intergenic 25.0%
! AAAACAATTCTTTCAACCTA+TGG - chr8_1:77438384-77438403 None:intergenic 25.0%
! TTGTCATGAATGAAACTATA+AGG + chr8_1:77438402-77438421 Msa1215960:intron 25.0%
! TATTAAAAGGACAACCTAAA+AGG - chr8_1:77438924-77438943 None:intergenic 25.0%
! CTAAGGAAGCTAATAAAAAT+TGG + chr8_1:77439041-77439060 Msa1215960:CDS 25.0%
!!! ATCAAACCATATTTTTACCT+TGG - chr8_1:77439067-77439086 None:intergenic 25.0%
! TTGATCAATGATATTCATCA+TGG + chr8_1:77439082-77439101 Msa1215960:intron 25.0%
! AGATCACTAGAAAGAAAAAA+GGG - chr8_1:77439563-77439582 None:intergenic 25.0%
! TTGCTTTCTAACAAAAACAA+GGG - chr8_1:77439680-77439699 None:intergenic 25.0%
! TTTGCTTTCTAACAAAAACA+AGG - chr8_1:77439681-77439700 None:intergenic 25.0%
!! CTATTATTAGTTTAGAGTAC+TGG - chr8_1:77439776-77439795 None:intergenic 25.0%
! AACTAATAATAGTACTCTAG+GGG + chr8_1:77439784-77439803 Msa1215960:intron 25.0%
! AGGTAAAAAAAACTCTACAA+AGG + chr8_1:77439920-77439939 Msa1215960:intron 25.0%
! AATGTATCTGGTCTATATAT+AGG - chr8_1:77440026-77440045 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG + chr8_1:77440073-77440092 Msa1215960:intron 25.0%
! CAAACAAAATGTATCTAGAA+GGG - chr8_1:77440284-77440303 None:intergenic 25.0%
! ACAAACAAAATGTATCTAGA+AGG - chr8_1:77440285-77440304 None:intergenic 25.0%
!!! TTCTAGATACATTTTGTTTG+TGG + chr8_1:77440284-77440303 Msa1215960:intron 25.0%
!! TTCAGGAATAAGAATTTTCA+AGG + chr8_1:77440308-77440327 Msa1215960:intron 25.0%
! AAAATTTACTTATTTGGGTG+GGG + chr8_1:77440357-77440376 Msa1215960:intron 25.0%
! TGCTTAACAAAGATTTATTC+TGG + chr8_1:77440561-77440580 Msa1215960:intron 25.0%
! ATAACTATGAATGATTGTTG+TGG - chr8_1:77440604-77440623 None:intergenic 25.0%
!!! AACTGGGAGATTTTTATTTT+TGG + chr8_1:77440747-77440766 Msa1215960:intron 25.0%
!!! AATTTTAGAGTTAACCTTTC+AGG - chr8_1:77440808-77440827 None:intergenic 25.0%
!! CAGTGAAAATTTTCAAATAG+CGG + chr8_1:77440871-77440890 Msa1215960:intron 25.0%
! ATACTTTCCTATTAACATTG+TGG - chr8_1:77440981-77441000 None:intergenic 25.0%
! CAAAGAACAAAAAAGTAACA+CGG - chr8_1:77441088-77441107 None:intergenic 25.0%
!! AGAATTTTCGGTAACTTATT+AGG + chr8_1:77441237-77441256 Msa1215960:intron 25.0%
!!! AAATTTGTATTTTTTGCAGG+TGG + chr8_1:77441554-77441573 Msa1215960:intron 25.0%
!!! AATTTGTATTTTTTGCAGGT+GGG + chr8_1:77441555-77441574 Msa1215960:intron 25.0%
!! ATGATTTGTGAAATTTGAGA+AGG - chr8_1:77441690-77441709 None:intergenic 25.0%
! AATCATAACATAATTGCAAC+TGG + chr8_1:77441704-77441723 Msa1215960:intron 25.0%
! AAACATTGATCTTTCATTGA+TGG + chr8_1:77441793-77441812 Msa1215960:intron 25.0%
! TTCTGTAGAATTCTTCATAT+TGG + chr8_1:77441880-77441899 Msa1215960:intron 25.0%
!! CTATAGTTGTGATGAAATTT+TGG + chr8_1:77441953-77441972 Msa1215960:intron 25.0%
! CAAATTAATAACACAATAGG+AGG - chr8_1:77442017-77442036 None:intergenic 25.0%
! AAAATTCAACAGGAAAATGA+AGG - chr8_1:77442202-77442221 None:intergenic 25.0%
! TAGTATTATTGCAGTTTGAT+GGG - chr8_1:77442391-77442410 None:intergenic 25.0%
! TTAGTATTATTGCAGTTTGA+TGG - chr8_1:77442392-77442411 None:intergenic 25.0%
! ACCAATTTACTAGTGATTAT+TGG + chr8_1:77442538-77442557 Msa1215960:intron 25.0%
! CCAATTTACTAGTGATTATT+GGG + chr8_1:77442539-77442558 Msa1215960:intron 25.0%
! GATAGTTCTTAGACTAAAAA+AGG - chr8_1:77442746-77442765 None:intergenic 25.0%
!! ATACTACAAGCTATTAGTTT+GGG - chr8_1:77443127-77443146 None:intergenic 25.0%
! ATGATGTAAAATAATGGTTC+AGG + chr8_1:77443404-77443423 Msa1215960:intron 25.0%
! AATATCCTATCCAATTTATC+AGG + chr8_1:77443740-77443759 Msa1215960:intron 25.0%
! TCAAACTAAAGAATGTTTCA+TGG + chr8_1:77443772-77443791 Msa1215960:CDS 25.0%
! CAAACTAAAGAATGTTTCAT+GGG + chr8_1:77443773-77443792 Msa1215960:CDS 25.0%
! GAAAAAGCAAATATGTTCAT+TGG - chr8_1:77443925-77443944 None:intergenic 25.0%
! ACACATCATCAAAGTTTATT+CGG - chr8_1:77443947-77443966 None:intergenic 25.0%
! CACTTAAAAATACCTTTAGA+AGG + chr8_1:77443973-77443992 Msa1215960:intron 25.0%
! GAAACAGATATGTTCATAAT+CGG - chr8_1:77444032-77444051 None:intergenic 25.0%
! ATTATGAACATATCTGTTTC+TGG + chr8_1:77444032-77444051 Msa1215960:intron 25.0%
! CTACTGTAGATATCAATATT+TGG - chr8_1:77444079-77444098 None:intergenic 25.0%
! ACTATACATACCAAACAAAA+AGG + chr8_1:77444207-77444226 Msa1215960:intron 25.0%
! ATAACTACTATCTCAAAACA+TGG - chr8_1:77444603-77444622 None:intergenic 25.0%
!!! TTAACTATCCTTTGTTTTCA+TGG - chr8_1:77444639-77444658 None:intergenic 25.0%
! ATGAAAACAAAGGATAGTTA+AGG + chr8_1:77444638-77444657 Msa1215960:intron 25.0%
!! ACATTTTACGAATACACTTT+GGG + chr8_1:77444766-77444785 Msa1215960:intron 25.0%
! AACTTCAGTTAAGAATAATG+GGG - chr8_1:77445238-77445257 None:intergenic 25.0%
! AAATGTTGTTAGAAAGTAAG+CGG + chr8_1:77445479-77445498 Msa1215960:intron 25.0%
! TTCTATCATTTGTAAGTAAC+TGG + chr8_1:77445696-77445715 Msa1215960:intron 25.0%
! CTATAGCTGAATAACTTAAA+GGG - chr8_1:77445984-77446003 None:intergenic 25.0%
!! CTTTAAGTTATTCAGCTATA+GGG + chr8_1:77445983-77446002 Msa1215960:intron 25.0%
!! ATAGATAACGGTAAATTTGA+AGG - chr8_1:77446081-77446100 None:intergenic 25.0%
! ATCTATATTCTTTGTAATGG+AGG + chr8_1:77446095-77446114 Msa1215960:intron 25.0%
!! TCTATATTCTTTGTAATGGA+GGG + chr8_1:77446096-77446115 Msa1215960:intron 25.0%
! ATTAACAAAAATTGTCATGC+AGG + chr8_1:77446388-77446407 Msa1215960:intron 25.0%
! ATCATTGTAAAGTATAGTTG+GGG + chr8_1:77446557-77446576 Msa1215960:intron 25.0%
!! TGAAACTATTTCTTGGAATA+AGG - chr8_1:77446731-77446750 None:intergenic 25.0%
!! AAAACAGTGAAACTATTTCT+TGG - chr8_1:77446738-77446757 None:intergenic 25.0%
! TTTGACACAAACAAAATACA+TGG + chr8_1:77446818-77446837 Msa1215960:intron 25.0%
! AAAAATATGAGTTTGAAGAG+GGG - chr8_1:77447274-77447293 None:intergenic 25.0%
! CAAAAATATGAGTTTGAAGA+GGG - chr8_1:77447275-77447294 None:intergenic 25.0%
! ACAAAAATATGAGTTTGAAG+AGG - chr8_1:77447276-77447295 None:intergenic 25.0%
! TAATATTCAAGTCAAACTCA+GGG + chr8_1:77447295-77447314 Msa1215960:intron 25.0%
!! TTGAAAGTCCTCTTATTTAT+TGG + chr8_1:77447729-77447748 Msa1215960:intron 25.0%
! TTTCATCTCCAATAAATAAG+AGG - chr8_1:77447740-77447759 None:intergenic 25.0%
! ACAAAGTTACATTCATGAAA+GGG - chr8_1:77447769-77447788 None:intergenic 25.0%
! TACAAAGTTACATTCATGAA+AGG - chr8_1:77447770-77447789 None:intergenic 25.0%
! CATCTTAAAAAGATGTTACT+TGG - chr8_1:77447814-77447833 None:intergenic 25.0%
!!! CAAGTAACATCTTTTTAAGA+TGG + chr8_1:77447812-77447831 Msa1215960:intron 25.0%
! TCTACTCACTTGAATTTATT+TGG + chr8_1:77447895-77447914 Msa1215960:intron 25.0%
! AAAAAAAAAAAGGACGTAGA+AGG - chr8_1:77448252-77448271 None:intergenic 25.0%
!!! AGATTCTTGGAATTTTAACT+TGG + chr8_1:77448597-77448616 Msa1215960:intron 25.0%
! GAGTTGAAAAAACTATTCTT+AGG + chr8_1:77449029-77449048 Msa1215960:intron 25.0%
!! ATGAGATTCTTTGATAATCA+AGG - chr8_1:77449180-77449199 None:intergenic 25.0%
! AGAATCTCATTGTGATAATT+AGG + chr8_1:77449190-77449209 Msa1215960:intron 25.0%
! TTTGTCAGTATATGAAAAGT+TGG - chr8_1:77449239-77449258 None:intergenic 25.0%
!!! TGATTTTCATTTTTTTTGGG+AGG + chr8_1:77449269-77449288 Msa1215960:intron 25.0%
!!! GATTTTCATTTTTTTTGGGA+GGG + chr8_1:77449270-77449289 Msa1215960:intron 25.0%
! CATACAATGCTAGAATATAA+AGG - chr8_1:77449418-77449437 None:intergenic 25.0%
!! ATAAACTGTAATTTTCAGAG+AGG - chr8_1:77449471-77449490 None:intergenic 25.0%
!! GAGTAGCTAATATTTTTCAT+TGG + chr8_1:77449759-77449778 Msa1215960:intron 25.0%
!! TTTCAGACAAGATAACTTTT+TGG + chr8_1:77449859-77449878 Msa1215960:CDS 25.0%
!!! GTTTTGTTTATGACCATATA+GGG + chr8_1:77450154-77450173 Msa1215960:intron 25.0%
! CCAATCTATTCTATATTACA+CGG - chr8_1:77450181-77450200 None:intergenic 25.0%
! CGTGTAATATAGAATAGATT+GGG + chr8_1:77450179-77450198 Msa1215960:intron 25.0%
!! AATTTTTATAAGCAACAGCA+TGG - chr8_1:77450268-77450287 None:intergenic 25.0%
! AATTTCAACGAAGTTGAATT+GGG - chr8_1:77450342-77450361 None:intergenic 25.0%
! ATTTCTTGTAAACTAAAGCT+CGG - chr8_1:77450396-77450415 None:intergenic 25.0%
!! ATATTGAAGCTGTGATTTTA+TGG + chr8_1:77450678-77450697 Msa1215960:intron 25.0%
!!! AAATCCTAAATATTTCTAGG+AGG + chr8_1:77451276-77451295 Msa1215960:intron 25.0%
!!! AATCCTAAATATTTCTAGGA+GGG + chr8_1:77451277-77451296 Msa1215960:intron 25.0%
!!! TTGTCTGCTTATTTTTGTTT+AGG - chr8_1:77451382-77451401 None:intergenic 25.0%
! CATGTTATTGCTATAATGAA+AGG - chr8_1:77451430-77451449 None:intergenic 25.0%
! TTATAGCAATAACATGCAAA+AGG + chr8_1:77451434-77451453 Msa1215960:intron 25.0%
! AATGGGTGATTTAATATTTC+TGG - chr8_1:77451659-77451678 None:intergenic 25.0%
! GTCATAATAATGAAATGGAA+TGG - chr8_1:77451677-77451696 None:intergenic 25.0%
! ATTATGACTCAAACTTACAA+TGG + chr8_1:77451689-77451708 Msa1215960:three_prime_UTR 25.0%
! TTATGACTCAAACTTACAAT+GGG + chr8_1:77451690-77451709 Msa1215960:three_prime_UTR 25.0%
!! GAATTTTTGTACAGATACTT+TGG + chr8_1:77451741-77451760 Msa1215960:three_prime_UTR 25.0%
! TACTGAATAAAATCAAGTAC+GGG - chr8_1:77451780-77451799 None:intergenic 25.0%
! TAGAAAAATGAACATGTTCT+AGG - chr8_1:77452073-77452092 None:intergenic 25.0%
!!! TAGAACATGTTCATTTTTCT+AGG + chr8_1:77452072-77452091 Msa1215960:three_prime_UTR 25.0%
! TTCTAGGTTAAATAGATGTT+TGG + chr8_1:77452088-77452107 Msa1215960:three_prime_UTR 25.0%
!!! AATCGTTACTTTTGTTTATG+AGG - chr8_1:77452147-77452166 None:intergenic 25.0%
GAAGAATAAGTGATTAAGTG+TGG + chr8_1:77436022-77436041 Msa1215960:five_prime_UTR 30.0%
!! CTTCGTTTTCTTTTGATTAG+AGG + chr8_1:77436189-77436208 Msa1215960:CDS 30.0%
TTTATCATCAAAACGCTTGT+CGG + chr8_1:77436428-77436447 Msa1215960:intron 30.0%
ACAAATACTTACTGAGAAGT+AGG + chr8_1:77436479-77436498 Msa1215960:intron 30.0%
CAAATACTTACTGAGAAGTA+GGG + chr8_1:77436480-77436499 Msa1215960:intron 30.0%
AAATACTTACTGAGAAGTAG+GGG + chr8_1:77436481-77436500 Msa1215960:intron 30.0%
!! CGGAACAATATCTTTTGATT+TGG + chr8_1:77436935-77436954 Msa1215960:intron 30.0%
! GTTTTACAATCGATTAGATG+AGG + chr8_1:77437046-77437065 Msa1215960:CDS 30.0%
AGTGACAAATTGATCAATCT+TGG - chr8_1:77437193-77437212 None:intergenic 30.0%
! TTAATCCCATTGCATTTTTC+AGG + chr8_1:77437389-77437408 Msa1215960:intron 30.0%
TTTATCGACATTTCTTGCTT+TGG - chr8_1:77437670-77437689 None:intergenic 30.0%
GTTGTATGTTGGACTTAAAT+TGG - chr8_1:77437741-77437760 None:intergenic 30.0%
TCAAAGGATTGTTCAAAGTA+CGG - chr8_1:77437830-77437849 None:intergenic 30.0%
ATTAAAACCGATAACAAGTG+TGG + chr8_1:77437863-77437882 Msa1215960:intron 30.0%
AACCTAGTTAATCATCTTGA+TGG - chr8_1:77437926-77437945 None:intergenic 30.0%
CTTTAAACGGGAAAATTCAA+GGG - chr8_1:77437980-77437999 None:intergenic 30.0%
ACTGTATCAAACCTTTAAAC+GGG - chr8_1:77437992-77438011 None:intergenic 30.0%
ACAAGCAATCTTGATGAAAA+TGG - chr8_1:77438168-77438187 None:intergenic 30.0%
! ATTTTCTATGGCTTTTCCAT+AGG + chr8_1:77438365-77438384 Msa1215960:intron 30.0%
TGCAATGCTTATTAACAATG+TGG + chr8_1:77438610-77438629 Msa1215960:intron 30.0%
TGCTTATTAACAATGTGGAT+TGG + chr8_1:77438615-77438634 Msa1215960:intron 30.0%
TGTACTTCGCAAGTATAAAA+AGG - chr8_1:77438768-77438787 None:intergenic 30.0%
! TTGCTGTTGAACTCATTATT+AGG + chr8_1:77438891-77438910 Msa1215960:intron 30.0%
! TATCATCGCTCTTTATGTTT+TGG + chr8_1:77438966-77438985 Msa1215960:intron 30.0%
AAGCTAATAAAAATTGGCCA+AGG + chr8_1:77439047-77439066 Msa1215960:CDS 30.0%
AATTGGCCAAGGTAAAAATA+TGG + chr8_1:77439058-77439077 Msa1215960:intron 30.0%
ACATAATTTCAGAACCACAT+TGG - chr8_1:77439186-77439205 None:intergenic 30.0%
TTTCTGATTGTGCTATATTC+TGG + chr8_1:77439277-77439296 Msa1215960:intron 30.0%
TTCTGATTGTGCTATATTCT+GGG + chr8_1:77439278-77439297 Msa1215960:intron 30.0%
GATCACTAGAAAGAAAAAAG+GGG - chr8_1:77439562-77439581 None:intergenic 30.0%
GAGATCACTAGAAAGAAAAA+AGG - chr8_1:77439564-77439583 None:intergenic 30.0%
ATAAAGTAAGAGAGCAAAAG+AGG - chr8_1:77439854-77439873 None:intergenic 30.0%
CTGGAAAGAGAAAGAAAAAA+AGG + chr8_1:77439900-77439919 Msa1215960:intron 30.0%
AAAATGTATCTAGAAGGGTA+AGG - chr8_1:77440279-77440298 None:intergenic 30.0%
!! TACATTTTGTTTGTGGTTTC+AGG + chr8_1:77440291-77440310 Msa1215960:intron 30.0%
AAATTTACTTATTTGGGTGG+GGG + chr8_1:77440358-77440377 Msa1215960:intron 30.0%
TTAAGCAATTTATGCTGTTC+AGG - chr8_1:77440548-77440567 None:intergenic 30.0%
AACATAGATGACTAATTGTG+TGG + chr8_1:77440624-77440643 Msa1215960:intron 30.0%
AAGTCCTTTCTGATTAAACT+GGG + chr8_1:77440731-77440750 Msa1215960:intron 30.0%
! CGCTATTTGAAAATTTTCAC+TGG - chr8_1:77440873-77440892 None:intergenic 30.0%
AATGTGACAGAAACATATCA+AGG - chr8_1:77441014-77441033 None:intergenic 30.0%
!!! CTTTTTTGTTCTTTGCAGAA+TGG + chr8_1:77441093-77441112 Msa1215960:intron 30.0%
AAATTATGGTCTGCTTAGTT+TGG + chr8_1:77441261-77441280 Msa1215960:intron 30.0%
GTTAACATCAATTGATTACC+GGG - chr8_1:77441668-77441687 None:intergenic 30.0%
GGTTAACATCAATTGATTAC+CGG - chr8_1:77441669-77441688 None:intergenic 30.0%
TTACAGACGTCAAAGTTAAT+AGG - chr8_1:77441856-77441875 None:intergenic 30.0%
!!! GTGTATTTGAGTTTTAGGTT+CGG + chr8_1:77441924-77441943 Msa1215960:intron 30.0%
! TTACCTTTTAAACTTAACCC+AGG + chr8_1:77442075-77442094 Msa1215960:intron 30.0%
CAAGTATTATGTAAGAGTCT+CGG - chr8_1:77442232-77442251 None:intergenic 30.0%
!!! GGTTTTTAAGTACAAAAGTC+TGG + chr8_1:77442474-77442493 Msa1215960:intron 30.0%
CCCAATAATCACTAGTAAAT+TGG - chr8_1:77442542-77442561 None:intergenic 30.0%
! AATCGTAAGATGACTCTTTT+TGG + chr8_1:77442676-77442695 Msa1215960:intron 30.0%
!!! CTCTTTTTGGTTGAATAGTT+TGG + chr8_1:77442689-77442708 Msa1215960:intron 30.0%
ATAGTTTGGTTGTTTGCTTA+TGG + chr8_1:77442703-77442722 Msa1215960:intron 30.0%
! TCTTTGCATGTTTTGTATTC+TGG + chr8_1:77442840-77442859 Msa1215960:intron 30.0%
! TTCAGGTTATCAAAAGTATG+TGG + chr8_1:77443101-77443120 Msa1215960:intron 30.0%
CATACTACAAGCTATTAGTT+TGG - chr8_1:77443128-77443147 None:intergenic 30.0%
! AATAGCTTGTAGTATGTGTT+TGG + chr8_1:77443132-77443151 Msa1215960:intron 30.0%
! ATAGCTTGTAGTATGTGTTT+GGG + chr8_1:77443133-77443152 Msa1215960:intron 30.0%
AACACACAAATTCACTCAAA+TGG - chr8_1:77443271-77443290 None:intergenic 30.0%
! GATTTGAAATCCCTGATTAA+TGG + chr8_1:77443338-77443357 Msa1215960:intron 30.0%
AAATTGTTCGCCATTAATCA+GGG - chr8_1:77443351-77443370 None:intergenic 30.0%
GTATGTGACTACTATTAAAG+AGG + chr8_1:77443371-77443390 Msa1215960:intron 30.0%
AAATAATGGTTCAGGTCTAA+AGG + chr8_1:77443412-77443431 Msa1215960:intron 30.0%
!!! TATTTTGGAGTGAACTATTG+TGG - chr8_1:77443480-77443499 None:intergenic 30.0%
!!! AATGGAAGCATCAGATATTT+TGG - chr8_1:77443495-77443514 None:intergenic 30.0%
TTCATATTCAGAACTGGAAA+TGG - chr8_1:77443513-77443532 None:intergenic 30.0%
TTCATCTTCATATTCAGAAC+TGG - chr8_1:77443519-77443538 None:intergenic 30.0%
!! AGATGAGTTTTATGATGCAA+TGG + chr8_1:77443544-77443563 Msa1215960:CDS 30.0%
! ACTGATCTGAAATGAAGAAA+AGG + chr8_1:77443690-77443709 Msa1215960:intron 30.0%
CTGTAACTTTCTGTAATAGT+TGG + chr8_1:77443883-77443902 Msa1215960:intron 30.0%
! AAAATACCTTTAGAAGGTCA+AGG + chr8_1:77443979-77443998 Msa1215960:intron 30.0%
! TTCATAATCGGTTAGGATTT+TGG - chr8_1:77444020-77444039 None:intergenic 30.0%
AGATATGTTCATAATCGGTT+AGG - chr8_1:77444027-77444046 None:intergenic 30.0%
!! AACATATCTGTTTCTGGTTT+AGG + chr8_1:77444038-77444057 Msa1215960:intron 30.0%
!! GACTAATTTGCCTTTTTGTT+TGG - chr8_1:77444220-77444239 None:intergenic 30.0%
TTGGGACCGAAAATTATAAA+GGG + chr8_1:77444431-77444450 Msa1215960:intron 30.0%
! GGAGATCCCTTTATAATTTT+CGG - chr8_1:77444440-77444459 None:intergenic 30.0%
AAAACAAAGGATAGTTAAGG+TGG + chr8_1:77444641-77444660 Msa1215960:intron 30.0%
! CACATTTTACGAATACACTT+TGG + chr8_1:77444765-77444784 Msa1215960:intron 30.0%
AACAAGATCGGAAAGAAAAA+AGG - chr8_1:77445085-77445104 None:intergenic 30.0%
GAATCCTTAGATAACAAGAT+CGG - chr8_1:77445097-77445116 None:intergenic 30.0%
!! GTTATACTTTTTAGACCATG+CGG + chr8_1:77445190-77445209 Msa1215960:intron 30.0%
ACTTCAGTTAAGAATAATGG+GGG - chr8_1:77445237-77445256 None:intergenic 30.0%
TAATTGTGATAGAGAGAAGA+TGG - chr8_1:77445404-77445423 None:intergenic 30.0%
TCTCTCTATCACAATTAAAG+AGG + chr8_1:77445407-77445426 Msa1215960:intron 30.0%
! TCAATTTTCCCTTTATAGGT+GGG - chr8_1:77445459-77445478 None:intergenic 30.0%
! TTCAATTTTCCCTTTATAGG+TGG - chr8_1:77445460-77445479 None:intergenic 30.0%
! ACCTTACTACTTAAGCTTTT+GGG + chr8_1:77445612-77445631 Msa1215960:intron 30.0%
!! TATTTAGGTGGATTGATCAA+AGG - chr8_1:77445658-77445677 None:intergenic 30.0%
! GTATTTAAGTCTTATATGCC+TGG + chr8_1:77445760-77445779 Msa1215960:intron 30.0%
ATGACAATGACACAAATTGT+TGG + chr8_1:77445886-77445905 Msa1215960:CDS 30.0%
! ATCATAAATCCTTTTCCACT+AGG - chr8_1:77445918-77445937 None:intergenic 30.0%
GGAAAAGGATTTATGATTAG+AGG + chr8_1:77445921-77445940 Msa1215960:CDS 30.0%
CCTATAGCTGAATAACTTAA+AGG - chr8_1:77445985-77446004 None:intergenic 30.0%
! CCTTTAAGTTATTCAGCTAT+AGG + chr8_1:77445982-77446001 Msa1215960:intron 30.0%
! CTATATTCTTTGTAATGGAG+GGG + chr8_1:77446097-77446116 Msa1215960:intron 30.0%
ATTATTGTTTATGCAGCAGT+AGG - chr8_1:77446666-77446685 None:intergenic 30.0%
!!! CACTGTTTTTAGCTATTACA+TGG + chr8_1:77446749-77446768 Msa1215960:intron 30.0%
CATATCATATATTTCCTGTG+TGG + chr8_1:77446772-77446791 Msa1215960:intron 30.0%
!! ATTTTGTTTGTGTCAAACCA+TGG - chr8_1:77446815-77446834 None:intergenic 30.0%
GGTAAAAAATCTAACTGACA+CGG - chr8_1:77447008-77447027 None:intergenic 30.0%
GATGTTCTAATATTCTTCGA+CGG - chr8_1:77447029-77447048 None:intergenic 30.0%
AACATCCTTCAATTTACCAT+TGG + chr8_1:77447043-77447062 Msa1215960:intron 30.0%
TGATACCAATGGTAAATTGA+AGG - chr8_1:77447051-77447070 None:intergenic 30.0%
GTAAATATTGAGACTATTGC+AGG - chr8_1:77447198-77447217 None:intergenic 30.0%
GTAATATTCAAGTCAAACTC+AGG + chr8_1:77447294-77447313 Msa1215960:intron 30.0%
ACACAAAAAATCATGTGGTT+CGG + chr8_1:77447506-77447525 Msa1215960:intron 30.0%
CAAGTGAGTAGAAATTTAAG+AGG - chr8_1:77447887-77447906 None:intergenic 30.0%
TTAACGAACTTAACACTCTT+GGG - chr8_1:77447992-77448011 None:intergenic 30.0%
ATAGCAGTTATTCAGTTAGT+TGG + chr8_1:77448033-77448052 Msa1215960:intron 30.0%
! TGCGCATTTTATCAAAATCT+AGG + chr8_1:77448087-77448106 Msa1215960:intron 30.0%
TGGGATTTAAGCTTAATATG+GGG - chr8_1:77448337-77448356 None:intergenic 30.0%
GTGGGATTTAAGCTTAATAT+GGG - chr8_1:77448338-77448357 None:intergenic 30.0%
AGTGGGATTTAAGCTTAATA+TGG - chr8_1:77448339-77448358 None:intergenic 30.0%
TTAGCATGCACTGTATTAAA+AGG - chr8_1:77448782-77448801 None:intergenic 30.0%
AAATCTCCAGTTTATGGTTT+CGG - chr8_1:77448820-77448839 None:intergenic 30.0%
ATCTCAAAATCTCCAGTTTA+TGG - chr8_1:77448826-77448845 None:intergenic 30.0%
AGATTAACGACAAGGATAAA+TGG - chr8_1:77448921-77448940 None:intergenic 30.0%
ACAATACACATCATTGCAAA+AGG + chr8_1:77448984-77449003 Msa1215960:intron 30.0%
TTGGATGCAATATGTAAGAT+TGG - chr8_1:77449103-77449122 None:intergenic 30.0%
!! CGAGATTGATTTTCTTTCTT+AGG + chr8_1:77449153-77449172 Msa1215960:intron 30.0%
CAGTATATGAAAAGTTGGAT+TGG - chr8_1:77449234-77449253 None:intergenic 30.0%
! TTCGGAAGATTAGTTAGTAT+TGG + chr8_1:77449305-77449324 Msa1215960:intron 30.0%
ATTACAGAGGGAGAAAATAA+AGG - chr8_1:77449350-77449369 None:intergenic 30.0%
!! TCATTTTGGGAAATTACAGA+GGG - chr8_1:77449362-77449381 None:intergenic 30.0%
!! TTCATTTTGGGAAATTACAG+AGG - chr8_1:77449363-77449382 None:intergenic 30.0%
TTTCCCAAAATGAAGTAGAT+TGG + chr8_1:77449369-77449388 Msa1215960:intron 30.0%
! CAACCAATCTACTTCATTTT+GGG - chr8_1:77449375-77449394 None:intergenic 30.0%
TATAGAACCAAACTGTAGTT+TGG - chr8_1:77449571-77449590 None:intergenic 30.0%
ACTTATTCCAAGTATAGTTG+AGG + chr8_1:77449678-77449697 Msa1215960:CDS 30.0%
!! TTTTGGAGGTAATATTACCT+AGG + chr8_1:77449876-77449895 Msa1215960:intron 30.0%
! AACTTGAGAGAATCTGAAAT+TGG + chr8_1:77449973-77449992 Msa1215960:intron 30.0%
! AATTGGTTATTCTGAAGACT+TGG + chr8_1:77449990-77450009 Msa1215960:intron 30.0%
CTTTGAACTTTGAACAATGA+AGG + chr8_1:77450066-77450085 Msa1215960:intron 30.0%
!!! GGTTTTGTTTATGACCATAT+AGG + chr8_1:77450153-77450172 Msa1215960:intron 30.0%
CCGTGTAATATAGAATAGAT+TGG + chr8_1:77450178-77450197 Msa1215960:intron 30.0%
CAATTTCAACGAAGTTGAAT+TGG - chr8_1:77450343-77450362 None:intergenic 30.0%
TCTATATCAAAAGGAACAAG+GGG - chr8_1:77450641-77450660 None:intergenic 30.0%
GTCTATATCAAAAGGAACAA+GGG - chr8_1:77450642-77450661 None:intergenic 30.0%
AGTCTATATCAAAAGGAACA+AGG - chr8_1:77450643-77450662 None:intergenic 30.0%
TATGCAACTCTTAAGTCTAT+TGG + chr8_1:77450712-77450731 Msa1215960:intron 30.0%
GTTTACCCTTAATTTCACTA+CGG + chr8_1:77450763-77450782 Msa1215960:intron 30.0%
TTTACCCTTAATTTCACTAC+GGG + chr8_1:77450764-77450783 Msa1215960:intron 30.0%
ATATCCCGTAGTGAAATTAA+GGG - chr8_1:77450771-77450790 None:intergenic 30.0%
TATATCCCGTAGTGAAATTA+AGG - chr8_1:77450772-77450791 None:intergenic 30.0%
! TTGTATCGATGGTTTCTATT+TGG + chr8_1:77450793-77450812 Msa1215960:intron 30.0%
TCTCTTCACATATTAGTACA+CGG - chr8_1:77450852-77450871 None:intergenic 30.0%
AAAGATAACCTGTGGATATA+CGG - chr8_1:77450952-77450971 None:intergenic 30.0%
! TATCCACAGGTTATCTTTTA+TGG + chr8_1:77450954-77450973 Msa1215960:intron 30.0%
! ATCCACAGGTTATCTTTTAT+GGG + chr8_1:77450955-77450974 Msa1215960:intron 30.0%
! CTTTTGCATTGGAAATTGTA+CGG - chr8_1:77451075-77451094 None:intergenic 30.0%
! AAAAGTAGCAACTTTTGCAT+TGG - chr8_1:77451086-77451105 None:intergenic 30.0%
!! ATGGCTTAGCTTTTATACAA+AGG + chr8_1:77451169-77451188 Msa1215960:intron 30.0%
!! TGGCTTAGCTTTTATACAAA+GGG + chr8_1:77451170-77451189 Msa1215960:intron 30.0%
ATTCCCTCCTAGAAATATTT+AGG - chr8_1:77451283-77451302 None:intergenic 30.0%
!! TAAATATTTCTAGGAGGGAA+TGG + chr8_1:77451282-77451301 Msa1215960:intron 30.0%
!! TTTTTGTTTAGGCTAGATAC+AGG - chr8_1:77451371-77451390 None:intergenic 30.0%
TTGACTGATGTTATATTTGC+AGG + chr8_1:77451532-77451551 Msa1215960:intron 30.0%
CAAGTTTCAAACGGTTTAAT+CGG - chr8_1:77451601-77451620 None:intergenic 30.0%
TATGACTCAAACTTACAATG+GGG + chr8_1:77451691-77451710 Msa1215960:three_prime_UTR 30.0%
TCACTATCTTCACCAAAAGT+GGG + chr8_1:77435913-77435932 Msa1215960:five_prime_UTR 35.0%
TAGTAGAACATACAATGGCA+GGG - chr8_1:77436254-77436273 None:intergenic 35.0%
TTAGTAGAACATACAATGGC+AGG - chr8_1:77436255-77436274 None:intergenic 35.0%
TTAATCAGTGGGGTAATTAG+AGG - chr8_1:77436372-77436391 None:intergenic 35.0%
CAGTCAACTAAAGAGAGATT+TGG - chr8_1:77436638-77436657 None:intergenic 35.0%
CAAATCTCTCTTTAGTTGAC+TGG + chr8_1:77436636-77436655 Msa1215960:intron 35.0%
! GGAATGTTCTGTTTGAAACT+CGG + chr8_1:77436915-77436934 Msa1215960:intron 35.0%
!!! TTTTTTTTGTCTTCTTCCCC+AGG + chr8_1:77437007-77437026 Msa1215960:intron 35.0%
CGTAAAACATAAAGATCCTG+GGG - chr8_1:77437026-77437045 None:intergenic 35.0%
CCGTAAAACATAAAGATCCT+GGG - chr8_1:77437027-77437046 None:intergenic 35.0%
! CCCAGGATCTTTATGTTTTA+CGG + chr8_1:77437024-77437043 Msa1215960:intron 35.0%
ACCGTAAAACATAAAGATCC+TGG - chr8_1:77437028-77437047 None:intergenic 35.0%
ATAACTTACTTCTCCCTTTC+TGG - chr8_1:77437072-77437091 None:intergenic 35.0%
TCGTTAAAAAACATGCTGCA+GGG - chr8_1:77437148-77437167 None:intergenic 35.0%
TTATTGTGCACATAGTGCTT+TGG - chr8_1:77437339-77437358 None:intergenic 35.0%
! TTTTGCACTTAGTGTATGCT+GGG - chr8_1:77437445-77437464 None:intergenic 35.0%
! TTTTTGCACTTAGTGTATGC+TGG - chr8_1:77437446-77437465 None:intergenic 35.0%
AACTCATTGAAAACACCTTG+TGG + chr8_1:77437544-77437563 Msa1215960:CDS 35.0%
! GTTGGACTTAAATTGGCTTA+AGG - chr8_1:77437734-77437753 None:intergenic 35.0%
TGTTCAGAGAAGTTGTATGT+TGG - chr8_1:77437752-77437771 None:intergenic 35.0%
AATCCTTTGATGCTATCACA+GGG + chr8_1:77437840-77437859 Msa1215960:intron 35.0%
!! TGGATTACCACACTTGTTAT+CGG - chr8_1:77437873-77437892 None:intergenic 35.0%
TGCCATCAAGATGATTAACT+AGG + chr8_1:77437921-77437940 Msa1215960:intron 35.0%
AAGATGATTAACTAGGTTCC+TGG + chr8_1:77437928-77437947 Msa1215960:intron 35.0%
CCTTTAAACGGGAAAATTCA+AGG - chr8_1:77437981-77438000 None:intergenic 35.0%
! CCTTGAATTTTCCCGTTTAA+AGG + chr8_1:77437978-77437997 Msa1215960:intron 35.0%
ACAATAACACCCATGGTATT+GGG - chr8_1:77438103-77438122 None:intergenic 35.0%
AACAATAACACCCATGGTAT+TGG - chr8_1:77438104-77438123 None:intergenic 35.0%
TGAAAGAACAATAACACCCA+TGG - chr8_1:77438110-77438129 None:intergenic 35.0%
AGGTATGCGAAAATAACTAG+AGG + chr8_1:77438243-77438262 Msa1215960:intron 35.0%
ATGCGAAAATAACTAGAGGA+AGG + chr8_1:77438247-77438266 Msa1215960:intron 35.0%
ATAGACTTCCAATCTCAATC+AGG - chr8_1:77438304-77438323 None:intergenic 35.0%
TGAGATTGGAAGTCTATTTC+TGG + chr8_1:77438307-77438326 Msa1215960:intron 35.0%
! GAGATTGGAAGTCTATTTCT+GGG + chr8_1:77438308-77438327 Msa1215960:intron 35.0%
!! AGATTGGAAGTCTATTTCTG+GGG + chr8_1:77438309-77438328 Msa1215960:intron 35.0%
ACTGGATATATGTTCTTTGC+AGG + chr8_1:77438457-77438476 Msa1215960:intron 35.0%
ACCACTTGACAATTCATACT+CGG - chr8_1:77438483-77438502 None:intergenic 35.0%
TTGGGGAAATAAAGCATACT+CGG - chr8_1:77438537-77438556 None:intergenic 35.0%
! CATGACTGCATTTAAGATTG+GGG - chr8_1:77438554-77438573 None:intergenic 35.0%
! GCATGACTGCATTTAAGATT+GGG - chr8_1:77438555-77438574 None:intergenic 35.0%
! AGCATGACTGCATTTAAGAT+TGG - chr8_1:77438556-77438575 None:intergenic 35.0%
AGAAATGGAAAGACGATAGA+AGG - chr8_1:77438733-77438752 None:intergenic 35.0%
ACTTCGCAAGTATAAAAAGG+AGG - chr8_1:77438765-77438784 None:intergenic 35.0%
GTTATGCTTAACAAAAGACC+TGG + chr8_1:77438864-77438883 Msa1215960:intron 35.0%
! TATTAGGTGTTCTGCCTTTT+AGG + chr8_1:77438907-77438926 Msa1215960:intron 35.0%
!! ATCGCTCTTTATGTTTTGGA+AGG + chr8_1:77438970-77438989 Msa1215960:intron 35.0%
TTTGGAAGGATCAATCTTGA+AGG + chr8_1:77438984-77439003 Msa1215960:intron 35.0%
TCTGATTGTGCTATATTCTG+GGG + chr8_1:77439279-77439298 Msa1215960:intron 35.0%
!! TTCTATCTTTTTGAAAGGCC+CGG + chr8_1:77439353-77439372 Msa1215960:intron 35.0%
AGGGGTAATCAATCAATTCA+AGG + chr8_1:77439802-77439821 Msa1215960:intron 35.0%
GGGGTAATCAATCAATTCAA+GGG + chr8_1:77439803-77439822 Msa1215960:intron 35.0%
GGGTAATCAATCAATTCAAG+GGG + chr8_1:77439804-77439823 Msa1215960:intron 35.0%
! TCAATTCAAGGGGAATGTTT+TGG + chr8_1:77439814-77439833 Msa1215960:intron 35.0%
AAGAAAATCATTACTCCCTC+TGG + chr8_1:77439943-77439962 Msa1215960:intron 35.0%
TGCTTATAAATGTGACCAGA+GGG - chr8_1:77439961-77439980 None:intergenic 35.0%
TTGCTTATAAATGTGACCAG+AGG - chr8_1:77439962-77439981 None:intergenic 35.0%
TATGAACAAGAGCTACAAGT+AGG - chr8_1:77440219-77440238 None:intergenic 35.0%
GACAGAGTAAAACAAGTTGT+GGG - chr8_1:77440507-77440526 None:intergenic 35.0%
AGTAGAAATGACTATCTGAG+GGG - chr8_1:77440660-77440679 None:intergenic 35.0%
CAGTAGAAATGACTATCTGA+GGG - chr8_1:77440661-77440680 None:intergenic 35.0%
ACAGTAGAAATGACTATCTG+AGG - chr8_1:77440662-77440681 None:intergenic 35.0%
AAAGGACTTCATTACCAACA+AGG - chr8_1:77440720-77440739 None:intergenic 35.0%
GAAGTCCTTTCTGATTAAAC+TGG + chr8_1:77440730-77440749 Msa1215960:intron 35.0%
ATCTCCCAGTTTAATCAGAA+AGG - chr8_1:77440738-77440757 None:intergenic 35.0%
ACACAATTCCACAAGTTCAT+AGG - chr8_1:77440847-77440866 None:intergenic 35.0%
! GTATACTGTTGTCCTTTTAG+TGG + chr8_1:77440932-77440951 Msa1215960:intron 35.0%
TTGTTCTTTGCAGAATGGTA+AGG + chr8_1:77441098-77441117 Msa1215960:intron 35.0%
TGTTCTTTGCAGAATGGTAA+GGG + chr8_1:77441099-77441118 Msa1215960:intron 35.0%
GAGCTTGTAGATTCTTATGA+TGG + chr8_1:77441598-77441617 Msa1215960:intron 35.0%
! GGACACTATGATGTTGTTTA+CGG + chr8_1:77441619-77441638 Msa1215960:intron 35.0%
! GACACTATGATGTTGTTTAC+GGG + chr8_1:77441620-77441639 Msa1215960:intron 35.0%
ATGATCCTAAGTATCTATCC+CGG + chr8_1:77441647-77441666 Msa1215960:intron 35.0%
TGCAACTGGATTTCTTTGAT+AGG + chr8_1:77441718-77441737 Msa1215960:intron 35.0%
AAATTTGCACAGAGTAGCTA+AGG + chr8_1:77441816-77441835 Msa1215960:intron 35.0%
!! TGGCTGTGTATTTGAGTTTT+AGG + chr8_1:77441919-77441938 Msa1215960:intron 35.0%
! ATTTTGTCTTCTCTCGTCAA+TGG + chr8_1:77442114-77442133 Msa1215960:CDS 35.0%
CGGTTTCTTGAAAATTCAAC+AGG - chr8_1:77442212-77442231 None:intergenic 35.0%
GTATTATGCGTGCATATGTA+TGG + chr8_1:77442427-77442446 Msa1215960:intron 35.0%
ACAAAAGTCTGGTATTGCTA+TGG + chr8_1:77442485-77442504 Msa1215960:intron 35.0%
!! GGCTTTTTCTTATGTATAGC+TGG - chr8_1:77442625-77442644 None:intergenic 35.0%
AAGAAAAAGCCTCAAAGATC+TGG + chr8_1:77442634-77442653 Msa1215960:CDS 35.0%
TTTGGTTGTTTGCTTATGGT+AGG + chr8_1:77442707-77442726 Msa1215960:intron 35.0%
AGAAATTTGAACGCACCTAT+GGG + chr8_1:77442886-77442905 Msa1215960:CDS 35.0%
AGAATGTATCTCCAAAGTGT+GGG - chr8_1:77442938-77442957 None:intergenic 35.0%
CAAATTGTTCGCCATTAATC+AGG - chr8_1:77443352-77443371 None:intergenic 35.0%
! TGATGAGAAGCATGATCAAA+AGG + chr8_1:77443604-77443623 Msa1215960:CDS 35.0%
! AGAAGCATGATCAAAAGGTT+TGG + chr8_1:77443609-77443628 Msa1215960:intron 35.0%
TGACTCCTGATAAATTGGAT+AGG - chr8_1:77443748-77443767 None:intergenic 35.0%
ACTCTTGACTCCTGATAAAT+TGG - chr8_1:77443753-77443772 None:intergenic 35.0%
AGCAAATACCAAGCAAACAA+AGG - chr8_1:77443842-77443861 None:intergenic 35.0%
TTGTTTGCTTGGTATTTGCT+AGG + chr8_1:77443842-77443861 Msa1215960:intron 35.0%
! TGTTTGCTTGGTATTTGCTA+GGG + chr8_1:77443843-77443862 Msa1215960:intron 35.0%
! TTGGTATTTGCTAGGGTTAA+AGG + chr8_1:77443850-77443869 Msa1215960:intron 35.0%
ACAGAAAGTTACAGTAGCTT+TGG - chr8_1:77443877-77443896 None:intergenic 35.0%
CTAATTTATGTTGAGTCCCA+AGG - chr8_1:77444272-77444291 None:intergenic 35.0%
ACTACTGTGTTCATATGCAT+TGG + chr8_1:77444294-77444313 Msa1215960:intron 35.0%
CTTGGGACCGAAAATTATAA+AGG + chr8_1:77444430-77444449 Msa1215960:intron 35.0%
!!! TTTTTTACATTGGCCCAAGT+CGG + chr8_1:77444499-77444518 Msa1215960:intron 35.0%
GAGAGATACCATGAAAACAA+AGG + chr8_1:77444628-77444647 Msa1215960:intron 35.0%
TTCTATATGAACAGCTTAGG+TGG - chr8_1:77444871-77444890 None:intergenic 35.0%
CAGTTCTATATGAACAGCTT+AGG - chr8_1:77444874-77444893 None:intergenic 35.0%
! CTTTCCGATCTTGTTATCTA+AGG + chr8_1:77445090-77445109 Msa1215960:intron 35.0%
! TAAGAATAATGGGGGTAACA+AGG - chr8_1:77445229-77445248 None:intergenic 35.0%
TGTACATTATCCATGACTCT+TGG + chr8_1:77445534-77445553 Msa1215960:intron 35.0%
! CACCTTACTACTTAAGCTTT+TGG + chr8_1:77445611-77445630 Msa1215960:intron 35.0%
TCCCAAAAGCTTAAGTAGTA+AGG - chr8_1:77445616-77445635 None:intergenic 35.0%
!!! ACTTAAGCTTTTGGGATAGT+TGG + chr8_1:77445620-77445639 Msa1215960:intron 35.0%
AAAGAACCATGTATGTCGTT+TGG - chr8_1:77445852-77445871 None:intergenic 35.0%
GTTATTCAGCTATAGGGAAA+AGG + chr8_1:77445989-77446008 Msa1215960:intron 35.0%
GTACAGAAGAAAGCAACATA+TGG - chr8_1:77446242-77446261 None:intergenic 35.0%
!! TATGTTGCTTTCTTCTGTAC+TGG + chr8_1:77446242-77446261 Msa1215960:intron 35.0%
!! TTTCTTCTGTACTGGTTGAA+TGG + chr8_1:77446250-77446269 Msa1215960:intron 35.0%
TAAATGGAGCTGATGGTAAA+TGG - chr8_1:77446290-77446309 None:intergenic 35.0%
AAAATTGTCATGCAGGTAGT+TGG + chr8_1:77446395-77446414 Msa1215960:intron 35.0%
TTAAGCTCATAGCAGTAGAT+TGG + chr8_1:77446432-77446451 Msa1215960:CDS 35.0%
TCAATCCTTGGGTTAATTGA+TGG - chr8_1:77446631-77446650 None:intergenic 35.0%
ACATGAGAACTTCAATCCTT+GGG - chr8_1:77446642-77446661 None:intergenic 35.0%
AACATGAGAACTTCAATCCT+TGG - chr8_1:77446643-77446662 None:intergenic 35.0%
TTGTGCTTCTTTGATATCCA+TGG + chr8_1:77446795-77446814 Msa1215960:intron 35.0%
ACAAACAAAATACATGGAGC+TGG + chr8_1:77446824-77446843 Msa1215960:intron 35.0%
! CTTGAGAAGAGTGTATAAAG+AGG + chr8_1:77446928-77446947 Msa1215960:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG - chr8_1:77446975-77446994 None:intergenic 35.0%
AATCTAACTGACACGGAAAT+CGG - chr8_1:77447001-77447020 None:intergenic 35.0%
!!! TAAAAGAGTACCCCTTTTAC+AGG - chr8_1:77447152-77447171 None:intergenic 35.0%
ATGGTATATTGTGCTGTGTT+AGG + chr8_1:77447397-77447416 Msa1215960:intron 35.0%
CCTTCTGTGGGTAAATTTAA+TGG - chr8_1:77447437-77447456 None:intergenic 35.0%
CCATTAAATTTACCCACAGA+AGG + chr8_1:77447434-77447453 Msa1215960:intron 35.0%
GGAGAACACAAAAAATCATG+TGG + chr8_1:77447501-77447520 Msa1215960:intron 35.0%
! ATTTTGTTGGAACGTTTCCA+TGG - chr8_1:77447548-77447567 None:intergenic 35.0%
!!! TGGTAGAGTTTTTCAAGAGT+CGG + chr8_1:77447832-77447851 Msa1215960:intron 35.0%
CTTAACGAACTTAACACTCT+TGG - chr8_1:77447993-77448012 None:intergenic 35.0%
TCTCAATTCTCTTAACCCTT+AGG + chr8_1:77448193-77448212 Msa1215960:intron 35.0%
CCATGATTGAAGAAACCTAA+GGG - chr8_1:77448211-77448230 None:intergenic 35.0%
TCCATGATTGAAGAAACCTA+AGG - chr8_1:77448212-77448231 None:intergenic 35.0%
! TTTTCGCAAAGCTGTATTAG+AGG + chr8_1:77448278-77448297 Msa1215960:intron 35.0%
GGAAAACATAGTGTAGAGTT+TGG - chr8_1:77448376-77448395 None:intergenic 35.0%
!! GTTGTAGGGATTAGTTACAA+GGG - chr8_1:77448397-77448416 None:intergenic 35.0%
! TAGTTTGTCCCTATGTTCTA+GGG - chr8_1:77448432-77448451 None:intergenic 35.0%
!! TTAGTTTGTCCCTATGTTCT+AGG - chr8_1:77448433-77448452 None:intergenic 35.0%
!! AGTAGAATCTCCCTTTGTTT+TGG + chr8_1:77448624-77448643 Msa1215960:intron 35.0%
TGATTTCCGAAACCATAAAC+TGG + chr8_1:77448811-77448830 Msa1215960:intron 35.0%
TGACTGAAATTCAGATGGAA+AGG - chr8_1:77448880-77448899 None:intergenic 35.0%
ACTTCTGACTGAAATTCAGA+TGG - chr8_1:77448885-77448904 None:intergenic 35.0%
TCTGAATTTCAGTCAGAAGT+CGG + chr8_1:77448885-77448904 Msa1215960:intron 35.0%
TTTGTCCGTACATGAAAAGT+CGG - chr8_1:77449127-77449146 None:intergenic 35.0%
! CCAACCAATCTACTTCATTT+TGG - chr8_1:77449376-77449395 None:intergenic 35.0%
CCAAAATGAAGTAGATTGGT+TGG + chr8_1:77449373-77449392 Msa1215960:intron 35.0%
CATACTTGCTCTTATTCCTA+TGG - chr8_1:77449444-77449463 None:intergenic 35.0%
AGAAAATTTCCACGAGAAAC+TGG - chr8_1:77449503-77449522 None:intergenic 35.0%
! AAACTGTAGTTTGGTTTAGC+AGG - chr8_1:77449562-77449581 None:intergenic 35.0%
TGCTAAACCAAACTACAGTT+TGG + chr8_1:77449561-77449580 Msa1215960:CDS 35.0%
ATGTCCTGTTTGATGTCTTA+CGG + chr8_1:77449732-77449751 Msa1215960:intron 35.0%
TTCATTGGGTATAGGGATAT+TGG + chr8_1:77449774-77449793 Msa1215960:intron 35.0%
! CAGACAAGATAACTTTTTGG+AGG + chr8_1:77449862-77449881 Msa1215960:CDS 35.0%
CAAAGTACAACAGAGAAGAA+AGG - chr8_1:77449902-77449921 None:intergenic 35.0%
CTTTCTTCTCTGTTGTACTT+TGG + chr8_1:77449900-77449919 Msa1215960:intron 35.0%
TATATTACACGGTCCCTATA+TGG - chr8_1:77450170-77450189 None:intergenic 35.0%
ATAGAATAGATTGGGATTGC+TGG + chr8_1:77450187-77450206 Msa1215960:intron 35.0%
TTGGGATTGCTGGAATAAAA+TGG + chr8_1:77450197-77450216 Msa1215960:intron 35.0%
TTGTATTATGCAGATTGACG+TGG + chr8_1:77450477-77450496 Msa1215960:intron 35.0%
TTGTAACATATCCTAGCACA+AGG - chr8_1:77450540-77450559 None:intergenic 35.0%
AAACCTCTATCAAAATGGCA+AGG - chr8_1:77450576-77450595 None:intergenic 35.0%
GACACAAACCTCTATCAAAA+TGG - chr8_1:77450581-77450600 None:intergenic 35.0%
TCCAGAAAAATGATAACCAG+AGG - chr8_1:77450610-77450629 None:intergenic 35.0%
CTTAAGTCTATTGGTCAGAA+AGG + chr8_1:77450721-77450740 Msa1215960:intron 35.0%
ACGGGATATAATTGTATCGA+TGG + chr8_1:77450782-77450801 Msa1215960:intron 35.0%
CTCTTCACATATTAGTACAC+GGG - chr8_1:77450851-77450870 None:intergenic 35.0%
GTTCCTTAACAATACCCTTA+GGG - chr8_1:77450996-77451015 None:intergenic 35.0%
TATGCTTAAACAATGCCCTT+AGG + chr8_1:77451107-77451126 Msa1215960:intron 35.0%
ATGCTTAAACAATGCCCTTA+GGG + chr8_1:77451108-77451127 Msa1215960:intron 35.0%
AATGTTAACAAGTGCCCTAA+GGG - chr8_1:77451125-77451144 None:intergenic 35.0%
AAATGTTAACAAGTGCCCTA+AGG - chr8_1:77451126-77451145 None:intergenic 35.0%
TCTTCTTGCCGAATAAAAGA+TGG - chr8_1:77451150-77451169 None:intergenic 35.0%
! TCTTTTATTCGGCAAGAAGA+TGG + chr8_1:77451150-77451169 Msa1215960:intron 35.0%
! TCTGTGTATTTTGTCAGAGA+GGG - chr8_1:77451330-77451349 None:intergenic 35.0%
! TTCTGTGTATTTTGTCAGAG+AGG - chr8_1:77451331-77451350 None:intergenic 35.0%
! GATTGCAGCTTTTATATCCT+CGG + chr8_1:77451456-77451475 Msa1215960:intron 35.0%
ATATTTGCAGGCAAAAGAAG+AGG + chr8_1:77451544-77451563 Msa1215960:intron 35.0%
ACAGTTCCAAGAATGTATTC+TGG - chr8_1:77451578-77451597 None:intergenic 35.0%
! TGGCAGATTCAAGTTTCAAA+CGG - chr8_1:77451610-77451629 None:intergenic 35.0%
ATCATGTGTCATGTAGAATG+TGG - chr8_1:77451881-77451900 None:intergenic 35.0%
! CACTTTTGGTGAAGATAGTG+AGG - chr8_1:77435914-77435933 None:intergenic 40.0%
CTCACTATCTTCACCAAAAG+TGG + chr8_1:77435912-77435931 Msa1215960:five_prime_UTR 40.0%
TTCGGTTGGGTATATCACTT+AGG + chr8_1:77436135-77436154 Msa1215960:CDS 40.0%
CACTTAGGAGTCAATTCCAT+TGG + chr8_1:77436150-77436169 Msa1215960:CDS 40.0%
ATGACAATACTGACGACCAA+TGG - chr8_1:77436169-77436188 None:intergenic 40.0%
!!! TTACCCCATCGTTGACTTTT+CGG - chr8_1:77436827-77436846 None:intergenic 40.0%
GTCGTTAAAAAACATGCTGC+AGG - chr8_1:77437149-77437168 None:intergenic 40.0%
ACAAGATGAGACACTCATTG+TGG - chr8_1:77437469-77437488 None:intergenic 40.0%
TTGGGTAAAGTTCGCATAGA+TGG - chr8_1:77437509-77437528 None:intergenic 40.0%
TTACCCAAAGTTGCAGGATT+TGG + chr8_1:77437521-77437540 Msa1215960:CDS 40.0%
GTTCCAAATCCTGCAACTTT+GGG - chr8_1:77437527-77437546 None:intergenic 40.0%
AGTTCCAAATCCTGCAACTT+TGG - chr8_1:77437528-77437547 None:intergenic 40.0%
ATTGAAAACACCTTGTGGCA+AGG + chr8_1:77437549-77437568 Msa1215960:CDS 40.0%
!!! TCTTTTTTAGCAAGACCCTG+AGG - chr8_1:77437605-77437624 None:intergenic 40.0%
TGGCTTAAGGAAACACTCTT+GGG - chr8_1:77437721-77437740 None:intergenic 40.0%
TTGGCTTAAGGAAACACTCT+TGG - chr8_1:77437722-77437741 None:intergenic 40.0%
CAATCCTTTGATGCTATCAC+AGG + chr8_1:77437839-77437858 Msa1215960:intron 40.0%
AATCCCTGTGATAGCATCAA+AGG - chr8_1:77437846-77437865 None:intergenic 40.0%
! ATATTACCACACTTGTTGCG+AGG + chr8_1:77437896-77437915 Msa1215960:intron 40.0%
CTGCATCTTTGTGTCTGTAT+TGG + chr8_1:77438049-77438068 Msa1215960:intron 40.0%
TTAATGAACCCCCAATACCA+TGG + chr8_1:77438090-77438109 Msa1215960:intron 40.0%
TAATGAACCCCCAATACCAT+GGG + chr8_1:77438091-77438110 Msa1215960:intron 40.0%
! AATAACACCCATGGTATTGG+GGG - chr8_1:77438101-77438120 None:intergenic 40.0%
CAATAACACCCATGGTATTG+GGG - chr8_1:77438102-77438121 None:intergenic 40.0%
ATTTGATCATGCCAAGCAAC+AGG + chr8_1:77438223-77438242 Msa1215960:CDS 40.0%
! ATTTTCGCATACCTGTTGCT+TGG - chr8_1:77438237-77438256 None:intergenic 40.0%
GAAAATAACTAGAGGAAGGC+AGG + chr8_1:77438251-77438270 Msa1215960:intron 40.0%
TCCAATCTCAATCAGGCTAA+GGG - chr8_1:77438297-77438316 None:intergenic 40.0%
TTCCAATCTCAATCAGGCTA+AGG - chr8_1:77438298-77438317 None:intergenic 40.0%
!! GATTGGAAGTCTATTTCTGG+GGG + chr8_1:77438310-77438329 Msa1215960:intron 40.0%
GAGTATGAATTGTCAAGTGG+TGG + chr8_1:77438482-77438501 Msa1215960:CDS 40.0%
! GTAGGGAATTGCAATGCTTT+TGG + chr8_1:77438705-77438724 Msa1215960:intron 40.0%
AGGAGGTGAGAAAGAAGAAA+TGG - chr8_1:77438748-77438767 None:intergenic 40.0%
GGATCAATCTTGAAGGACAT+CGG + chr8_1:77438991-77439010 Msa1215960:intron 40.0%
! TATTAGCTTCCTTAGTCCGT+GGG - chr8_1:77439036-77439055 None:intergenic 40.0%
! TTATTAGCTTCCTTAGTCCG+TGG - chr8_1:77439037-77439056 None:intergenic 40.0%
! GTGATAGTTGTGAAAGTGTG+TGG + chr8_1:77439207-77439226 Msa1215960:intron 40.0%
GTTACGGCAATCATCAAAGT+TGG + chr8_1:77439383-77439402 Msa1215960:CDS 40.0%
AATCATCAAAGTTGGCTGGT+AGG + chr8_1:77439391-77439410 Msa1215960:CDS 40.0%
ACACAGTTGAAGCACATCAA+TGG + chr8_1:77439442-77439461 Msa1215960:CDS 40.0%
ATGGAAATGTGTCCATACTG+TGG + chr8_1:77439461-77439480 Msa1215960:CDS 40.0%
GAAAAATACCAGCCACAGTA+TGG - chr8_1:77439476-77439495 None:intergenic 40.0%
TGTAGCCTATTACTAGACAG+TGG + chr8_1:77439518-77439537 Msa1215960:intron 40.0%
AACCACCACTGTCTAGTAAT+AGG - chr8_1:77439526-77439545 None:intergenic 40.0%
TTCACGATTACTTCAACTGC+TGG + chr8_1:77439725-77439744 Msa1215960:intron 40.0%
TCACGATTACTTCAACTGCT+GGG + chr8_1:77439726-77439745 Msa1215960:intron 40.0%
CTGAATAGAGGATGATGTGA+AGG + chr8_1:77439750-77439769 Msa1215960:intron 40.0%
!! ATTCAAGGGGAATGTTTTGG+AGG + chr8_1:77439817-77439836 Msa1215960:intron 40.0%
!! TTCAAGGGGAATGTTTTGGA+GGG + chr8_1:77439818-77439837 Msa1215960:intron 40.0%
AGTAAGAGAGCAAAAGAGGT+GGG - chr8_1:77439850-77439869 None:intergenic 40.0%
AAGTAAGAGAGCAAAAGAGG+TGG - chr8_1:77439851-77439870 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG + chr8_1:77440076-77440095 Msa1215960:intron 40.0%
TGCTTATAAATGTGACCGGA+GGG + chr8_1:77440077-77440096 Msa1215960:intron 40.0%
!! ACCGGAGGGAGTATTTATTT+GGG + chr8_1:77440091-77440110 Msa1215960:intron 40.0%
TCCCAAATAAATACTCCCTC+CGG - chr8_1:77440095-77440114 None:intergenic 40.0%
!! GGGAGTATTTATTTGGGACA+TGG + chr8_1:77440097-77440116 Msa1215960:intron 40.0%
! TGTCTTTTTGCTGCACGATT+TGG + chr8_1:77440144-77440163 Msa1215960:intron 40.0%
! CAAGGATGTTTCTGATCACA+AGG + chr8_1:77440326-77440345 Msa1215960:CDS 40.0%
GTTAGAATGACAGACATGAG+TGG - chr8_1:77440437-77440456 None:intergenic 40.0%
CTCATGTCTGTCATTCTAAC+AGG + chr8_1:77440437-77440456 Msa1215960:intron 40.0%
CGACAGAGTAAAACAAGTTG+TGG - chr8_1:77440508-77440527 None:intergenic 40.0%
GTAGAAATGACTATCTGAGG+GGG - chr8_1:77440659-77440678 None:intergenic 40.0%
GACTTCATTACCAACAAGGA+AGG - chr8_1:77440716-77440735 None:intergenic 40.0%
!! GAGACGCAAAAATGGATTGA+GGG - chr8_1:77440786-77440805 None:intergenic 40.0%
TTCATCCTCCTATGAACTTG+TGG + chr8_1:77440836-77440855 Msa1215960:intron 40.0%
CAATTCCACAAGTTCATAGG+AGG - chr8_1:77440844-77440863 None:intergenic 40.0%
AAGGACAACAGTATACACAG+AGG - chr8_1:77440928-77440947 None:intergenic 40.0%
CCACTTCATTCTCCACTAAA+AGG - chr8_1:77440947-77440966 None:intergenic 40.0%
! CCTTTTAGTGGAGAATGAAG+TGG + chr8_1:77440944-77440963 Msa1215960:intron 40.0%
! TAACACCGACAGATTTTGCA+AGG - chr8_1:77441128-77441147 None:intergenic 40.0%
GATTACCGGGATAGATACTT+AGG - chr8_1:77441655-77441674 None:intergenic 40.0%
ATACACAGCCAATACGTAAG+CGG - chr8_1:77441910-77441929 None:intergenic 40.0%
CCACCTGGGTTAAGTTTAAA+AGG - chr8_1:77442081-77442100 None:intergenic 40.0%
! CCTTTTAAACTTAACCCAGG+TGG + chr8_1:77442078-77442097 Msa1215960:intron 40.0%
GAGAAGACAAAATCCTGCTT+TGG - chr8_1:77442107-77442126 None:intergenic 40.0%
AAAGTCTGGTATTGCTATGG+CGG + chr8_1:77442488-77442507 Msa1215960:intron 40.0%
! AACCACTGACGTCTGTATTT+TGG + chr8_1:77442794-77442813 Msa1215960:intron 40.0%
! ACCACTGACGTCTGTATTTT+GGG + chr8_1:77442795-77442814 Msa1215960:intron 40.0%
CAGAAATTTGAACGCACCTA+TGG + chr8_1:77442885-77442904 Msa1215960:CDS 40.0%
TTTGGGCTATTTGATCCCAT+AGG - chr8_1:77442904-77442923 None:intergenic 40.0%
! TGTGGGTCACTAGACATTTT+GGG - chr8_1:77442921-77442940 None:intergenic 40.0%
CAGAATGTATCTCCAAAGTG+TGG - chr8_1:77442939-77442958 None:intergenic 40.0%
TGGAGATACATTCTGAATCC+TGG + chr8_1:77442944-77442963 Msa1215960:CDS 40.0%
ATTCTGAATCCTGGAATCGA+TGG + chr8_1:77442953-77442972 Msa1215960:CDS 40.0%
!! TTTGTTCTTCCATCGATTCC+AGG - chr8_1:77442965-77442984 None:intergenic 40.0%
GGAATCGATGGAAGAACAAA+CGG + chr8_1:77442965-77442984 Msa1215960:CDS 40.0%
ACTAGGCACAGTAATGTGTA+AGG - chr8_1:77443015-77443034 None:intergenic 40.0%
TTACACATTACTGTGCCTAG+TGG + chr8_1:77443014-77443033 Msa1215960:CDS 40.0%
CAAATACTTAACCTGCCACT+AGG - chr8_1:77443032-77443051 None:intergenic 40.0%
! CTATTGTGGTGGCATTTTCT+TGG - chr8_1:77443466-77443485 None:intergenic 40.0%
! TTTGGAGTGAACTATTGTGG+TGG - chr8_1:77443477-77443496 None:intergenic 40.0%
!! CAGCTTTTCCTTTGTTTGCT+TGG + chr8_1:77443831-77443850 Msa1215960:intron 40.0%
! GGTTTTCCTTGACCTTCTAA+AGG - chr8_1:77443988-77444007 None:intergenic 40.0%
CGCTGCAACATAATTCTAAG+AGG - chr8_1:77444247-77444266 None:intergenic 40.0%
AATTATGTTGCAGCGAACCT+TGG + chr8_1:77444252-77444271 Msa1215960:intron 40.0%
ATTATGTTGCAGCGAACCTT+GGG + chr8_1:77444253-77444272 Msa1215960:intron 40.0%
! TTTTTACATTGGCCCAAGTC+GGG + chr8_1:77444500-77444519 Msa1215960:intron 40.0%
ACTTTGGGTGCACAGTAATA+TGG + chr8_1:77444781-77444800 Msa1215960:intron 40.0%
! ATTTTCCCTTTATAGGTGGG+TGG - chr8_1:77445456-77445475 None:intergenic 40.0%
GGACCTTAAATTTCAGCACA+GGG + chr8_1:77445500-77445519 Msa1215960:intron 40.0%
CTACCCTGTGCTGAAATTTA+AGG - chr8_1:77445506-77445525 None:intergenic 40.0%
CTTAAATTTCAGCACAGGGT+AGG + chr8_1:77445504-77445523 Msa1215960:intron 40.0%
AAGTAGTAAGGTGAAACACG+TGG - chr8_1:77445604-77445623 None:intergenic 40.0%
TCCTGATCTAAGCGAAGAAT+TGG + chr8_1:77445797-77445816 Msa1215960:CDS 40.0%
TCCAATTCTTCGCTTAGATC+AGG - chr8_1:77445801-77445820 None:intergenic 40.0%
TAAGCGAAGAATTGGATCCT+CGG + chr8_1:77445805-77445824 Msa1215960:CDS 40.0%
!! TATGTCGTTTGGATGGATTG+TGG - chr8_1:77445841-77445860 None:intergenic 40.0%
ATCCATCCAAACGACATACA+TGG + chr8_1:77445843-77445862 Msa1215960:CDS 40.0%
! AACCATGTATGTCGTTTGGA+TGG - chr8_1:77445848-77445867 None:intergenic 40.0%
ATACATGGTTCTTTGCGCAA+AGG + chr8_1:77445858-77445877 Msa1215960:CDS 40.0%
AATTGTTGGACTTCTCCTAG+TGG + chr8_1:77445900-77445919 Msa1215960:CDS 40.0%
!! CTTTGTAATGGAGGGGTATT+AGG + chr8_1:77446104-77446123 Msa1215960:intron 40.0%
TTACCATCAGCTCCATTTAC+CGG + chr8_1:77446291-77446310 Msa1215960:intron 40.0%
ACTGCTATGAGCTTAAGAAG+AGG - chr8_1:77446428-77446447 None:intergenic 40.0%
CTAAGCCATCAATTAACCCA+AGG + chr8_1:77446623-77446642 Msa1215960:intron 40.0%
GAATCCTATCTATCCGATGT+GGG - chr8_1:77446909-77446928 None:intergenic 40.0%
AGAATCCTATCTATCCGATG+TGG - chr8_1:77446910-77446929 None:intergenic 40.0%
! GAGAAGAGTGTATAAAGAGG+AGG + chr8_1:77446931-77446950 Msa1215960:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG + chr8_1:77446973-77446992 Msa1215960:intron 40.0%
ATCTAACTGACACGGAAATC+GGG - chr8_1:77447000-77447019 None:intergenic 40.0%
TCCGTAATTTGAGGAGTTGA+CGG + chr8_1:77447116-77447135 Msa1215960:intron 40.0%
ACCGTCAACTCCTCAAATTA+CGG - chr8_1:77447120-77447139 None:intergenic 40.0%
GTGTACCTTCTCCTGTAAAA+GGG + chr8_1:77447138-77447157 Msa1215960:intron 40.0%
TGTACCTTCTCCTGTAAAAG+GGG + chr8_1:77447139-77447158 Msa1215960:intron 40.0%
! GGTGTTTTCTACTGAGAACT+AGG - chr8_1:77447326-77447345 None:intergenic 40.0%
TATCTTCGCTCTACAAACTC+GGG - chr8_1:77447348-77447367 None:intergenic 40.0%
CTATCTTCGCTCTACAAACT+CGG - chr8_1:77447349-77447368 None:intergenic 40.0%
TTCTGTATGAGCAACTGTCA+TGG + chr8_1:77447378-77447397 Msa1215960:intron 40.0%
CACTTGTAAGATCCTTCTGT+GGG - chr8_1:77447449-77447468 None:intergenic 40.0%
TCACTTGTAAGATCCTTCTG+TGG - chr8_1:77447450-77447469 None:intergenic 40.0%
GCACACTGCAAAGATACTAA+TGG + chr8_1:77447480-77447499 Msa1215960:intron 40.0%
GAACTTCTTACCTACATCCA+TGG + chr8_1:77447528-77447547 Msa1215960:intron 40.0%
AGAAACATTCAGCCATCTCT+TGG + chr8_1:77447855-77447874 Msa1215960:intron 40.0%
! AGTTAGTTGGTACAGATCTC+TGG + chr8_1:77448046-77448065 Msa1215960:intron 40.0%
CCCTTAGGTTTCTTCAATCA+TGG + chr8_1:77448208-77448227 Msa1215960:intron 40.0%
!! TGTAGAGTTTGGTGTACAGT+AGG - chr8_1:77448365-77448384 None:intergenic 40.0%
!! GGTTGTAGGGATTAGTTACA+AGG - chr8_1:77448398-77448417 None:intergenic 40.0%
GTAACTAATCCCTACAACCT+AGG + chr8_1:77448399-77448418 Msa1215960:intron 40.0%
GAACTATCCCCTAGAACATA+GGG + chr8_1:77448421-77448440 Msa1215960:intron 40.0%
AGTTTGTCCCTATGTTCTAG+GGG - chr8_1:77448431-77448450 None:intergenic 40.0%
!! CGCAGAATCTTTGAGATTCT+TGG + chr8_1:77448584-77448603 Msa1215960:intron 40.0%
!!! AGAATCTCCCTTTGTTTTGG+AGG + chr8_1:77448627-77448646 Msa1215960:intron 40.0%
TATCCTTGTCGTTAATCTGC+AGG + chr8_1:77448923-77448942 Msa1215960:CDS 40.0%
ATACCTGCAGATTAACGACA+AGG - chr8_1:77448929-77448948 None:intergenic 40.0%
TTGTCGTTAATCTGCAGGTA+TGG + chr8_1:77448928-77448947 Msa1215960:intron 40.0%
! CCAATCCGACTTTTCATGTA+CGG + chr8_1:77449119-77449138 Msa1215960:intron 40.0%
! GGAGGGTGTAAAAGTTTGTT+CGG + chr8_1:77449287-77449306 Msa1215960:intron 40.0%
CTAGAATATAAAGGCCGAGT+TGG - chr8_1:77449409-77449428 None:intergenic 40.0%
CTAGCATTGTATGACTCCAT+AGG + chr8_1:77449425-77449444 Msa1215960:intron 40.0%
GTGTATAAACCAGTTTCTCG+TGG + chr8_1:77449491-77449510 Msa1215960:intron 40.0%
!! CTGTTGGCTAAGTTTGTTGA+TGG + chr8_1:77449625-77449644 Msa1215960:CDS 40.0%
TTGATGGAAGTGATGTGTTC+CGG + chr8_1:77449641-77449660 Msa1215960:CDS 40.0%
TAAGTTTGAATCTCGAGTCC+CGG - chr8_1:77449663-77449682 None:intergenic 40.0%
TCGCATACCTCAACTATACT+TGG - chr8_1:77449688-77449707 None:intergenic 40.0%
AAAGCCGTAAGACATCAAAC+AGG - chr8_1:77449739-77449758 None:intergenic 40.0%
TTGGGTATAGGGATATTGGA+TGG + chr8_1:77449778-77449797 Msa1215960:intron 40.0%
AAGTTACAGCTTTCCCTAAC+AGG - chr8_1:77449832-77449851 None:intergenic 40.0%
CTTGCGTTCACTCTTTGTAA+AGG - chr8_1:77450096-77450115 None:intergenic 40.0%
AACATCTTACAGACCAAGTC+TGG + chr8_1:77450130-77450149 Msa1215960:intron 40.0%
ACATCTTACAGACCAAGTCT+GGG + chr8_1:77450131-77450150 Msa1215960:intron 40.0%
CATAAACAAAACCCCAGACT+TGG - chr8_1:77450146-77450165 None:intergenic 40.0%
ATGCAGATTGACGTGGATAT+TGG + chr8_1:77450484-77450503 Msa1215960:intron 40.0%
!!! TGACCTTGCCATTTTGATAG+AGG + chr8_1:77450570-77450589 Msa1215960:CDS 40.0%
!! GCCTCTGGTTATCATTTTTC+TGG + chr8_1:77450606-77450625 Msa1215960:intron 40.0%
TCAGAAAGGATGCTCTTCAA+GGG + chr8_1:77450735-77450754 Msa1215960:intron 40.0%
GTATAGTACCGTATATCCAC+AGG + chr8_1:77450941-77450960 Msa1215960:intron 40.0%
GACCCATAAAAGATAACCTG+TGG - chr8_1:77450960-77450979 None:intergenic 40.0%
TCTTGTTAACAAGTGCCCTA+AGG + chr8_1:77450978-77450997 Msa1215960:intron 40.0%
CTTGTTAACAAGTGCCCTAA+GGG + chr8_1:77450979-77450998 Msa1215960:intron 40.0%
GGTTCCTTAACAATACCCTT+AGG - chr8_1:77450997-77451016 None:intergenic 40.0%
!! TATTTCTAGGAGGGAATGGA+TGG + chr8_1:77451286-77451305 Msa1215960:intron 40.0%
GAGCTACCAGAATACATTCT+TGG + chr8_1:77451569-77451588 Msa1215960:CDS 40.0%
ACTTGAATCTGCCATACCAT+TGG + chr8_1:77451616-77451635 Msa1215960:CDS 40.0%
ACCTTAAACCTCCAATGGTA+TGG - chr8_1:77451630-77451649 None:intergenic 40.0%
AGAACACCTTAAACCTCCAA+TGG - chr8_1:77451635-77451654 None:intergenic 40.0%
! TTTCTTGTGGGACCCACTTT+TGG - chr8_1:77435928-77435947 None:intergenic 45.0%
TTGAGCAAATCGGGTAGCAA+AGG + chr8_1:77436096-77436115 Msa1215960:CDS 45.0%
CAAATCGGGTAGCAAAGGAT+CGG + chr8_1:77436101-77436120 Msa1215960:CDS 45.0%
! ACAATGGCAGGGTTTTCATG+AGG - chr8_1:77436243-77436262 None:intergenic 45.0%
GTGGGGTAATTAGAGGTTAG+TGG - chr8_1:77436365-77436384 None:intergenic 45.0%
GCGTTGCGGATTTGAACTTA+CGG + chr8_1:77436507-77436526 Msa1215960:intron 45.0%
! CCTAATCGGTTTCTGCACAT+AGG - chr8_1:77436760-77436779 None:intergenic 45.0%
CCTATGTGCAGAAACCGATT+AGG + chr8_1:77436757-77436776 Msa1215960:intron 45.0%
TGTGCAGAAACCGATTAGGA+AGG + chr8_1:77436761-77436780 Msa1215960:intron 45.0%
GTGCAGAAACCGATTAGGAA+GGG + chr8_1:77436762-77436781 Msa1215960:intron 45.0%
CCAACAACTCCCTTCCTAAT+CGG - chr8_1:77436774-77436793 None:intergenic 45.0%
TCGATTAGATGAGGCCAGAA+AGG + chr8_1:77437055-77437074 Msa1215960:CDS 45.0%
CGATTAGATGAGGCCAGAAA+GGG + chr8_1:77437056-77437075 Msa1215960:CDS 45.0%
!! GTGCACATAGTGCTTTGGAA+GGG - chr8_1:77437334-77437353 None:intergenic 45.0%
! TGTGCACATAGTGCTTTGGA+AGG - chr8_1:77437335-77437354 None:intergenic 45.0%
CGAACTTTACCCAAAGTTGC+AGG + chr8_1:77437515-77437534 Msa1215960:CDS 45.0%
!! TCCTCACACAAGCATTGACT+TGG - chr8_1:77437575-77437594 None:intergenic 45.0%
TGTGAGGACTTCTTACCTCA+GGG + chr8_1:77437587-77437606 Msa1215960:CDS 45.0%
CTTAAGGAAACACTCTTGGG+CGG - chr8_1:77437718-77437737 None:intergenic 45.0%
GTGCTAGTACGATTGTTGAG+TGG - chr8_1:77438019-77438038 None:intergenic 45.0%
AAGATTGCTTGTGCTACAGC+TGG + chr8_1:77438176-77438195 Msa1215960:intron 45.0%
AGATTGCTTGTGCTACAGCT+GGG + chr8_1:77438177-77438196 Msa1215960:intron 45.0%
ACCCTTAGCCTGATTGAGAT+TGG + chr8_1:77438293-77438312 Msa1215960:intron 45.0%
!! GAAGTCTATTTCTGGGGGAA+GGG + chr8_1:77438315-77438334 Msa1215960:intron 45.0%
!! AAGTCTATTTCTGGGGGAAG+GGG + chr8_1:77438316-77438335 Msa1215960:intron 45.0%
GCCGAGTATGAATTGTCAAG+TGG + chr8_1:77438479-77438498 Msa1215960:CDS 45.0%
TGCCAGAGACAGACTAAACA+TGG + chr8_1:77438508-77438527 Msa1215960:CDS 45.0%
CTCCATGTTTAGTCTGTCTC+TGG - chr8_1:77438513-77438532 None:intergenic 45.0%
CAGAGACAGACTAAACATGG+AGG + chr8_1:77438511-77438530 Msa1215960:CDS 45.0%
GAGTTCAACAGCAACTATCC+AGG - chr8_1:77438885-77438904 None:intergenic 45.0%
! ACATTGGCTAAGATGTGCAG+CGG - chr8_1:77439170-77439189 None:intergenic 45.0%
ATTGCCGTAACAATGTCTCC+GGG - chr8_1:77439374-77439393 None:intergenic 45.0%
GATTGCCGTAACAATGTCTC+CGG - chr8_1:77439375-77439394 None:intergenic 45.0%
AAATGTGTCCATACTGTGGC+TGG + chr8_1:77439465-77439484 Msa1215960:CDS 45.0%
AGCCTATTACTAGACAGTGG+TGG + chr8_1:77439521-77439540 Msa1215960:intron 45.0%
!! GACCGGAGGGAGTATTTATT+TGG + chr8_1:77440090-77440109 Msa1215960:intron 45.0%
TTTACTTATTTGGGTGGGGG+AGG + chr8_1:77440361-77440380 Msa1215960:intron 45.0%
CTTCTGCATTCCTTCCTTGT+TGG + chr8_1:77440703-77440722 Msa1215960:intron 45.0%
!! GGAGACGCAAAAATGGATTG+AGG - chr8_1:77440787-77440806 None:intergenic 45.0%
CCTTTCAGGAGACGCAAAAA+TGG - chr8_1:77440794-77440813 None:intergenic 45.0%
!! CCATTTTTGCGTCTCCTGAA+AGG + chr8_1:77440791-77440810 Msa1215960:intron 45.0%
GGTGTCCTTGCAAAATCTGT+CGG + chr8_1:77441120-77441139 Msa1215960:CDS 45.0%
GGAGGGAATACAAAGAAGTG+AGG - chr8_1:77441999-77442018 None:intergenic 45.0%
TTCTCTCGTCAATGGTTTCG+TGG + chr8_1:77442122-77442141 Msa1215960:CDS 45.0%
CAATGGTTTCGTGGACAAGA+TGG + chr8_1:77442131-77442150 Msa1215960:CDS 45.0%
CGATAACACGTTTGCAGCAT+GGG - chr8_1:77442455-77442474 None:intergenic 45.0%
CCATGCTGCAAACGTGTTAT+CGG + chr8_1:77442453-77442472 Msa1215960:intron 45.0%
CGTCGATAACCAGATCTTTG+AGG - chr8_1:77442646-77442665 None:intergenic 45.0%
! TTCTGGCTGTAGCATCTACA+TGG + chr8_1:77442857-77442876 Msa1215960:intron 45.0%
TCTGGCTGTAGCATCTACAT+GGG + chr8_1:77442858-77442877 Msa1215960:intron 45.0%
! GTGTGGGTCACTAGACATTT+TGG - chr8_1:77442922-77442941 None:intergenic 45.0%
ATGTCTAGTGACCCACACTT+TGG + chr8_1:77442924-77442943 Msa1215960:CDS 45.0%
!! GGTAGCTCGTTTTTACTCTC+AGG - chr8_1:77443250-77443269 None:intergenic 45.0%
! TTGTGGTGGCATTTTCTTGG+TGG - chr8_1:77443463-77443482 None:intergenic 45.0%
TCGTCATCGGATGAAGAAAG+TGG + chr8_1:77443578-77443597 Msa1215960:CDS 45.0%
TGCAGTTCGCTTCAAAGCTA+AGG - chr8_1:77443808-77443827 None:intergenic 45.0%
!! TTAGCTTTGAAGCGAACTGC+AGG + chr8_1:77443807-77443826 Msa1215960:CDS 45.0%
GAAGGTCAAGGAAAACCGAT+CGG + chr8_1:77443991-77444010 Msa1215960:intron 45.0%
!! TTAGGATTTTGGCAGCCGAT+CGG - chr8_1:77444009-77444028 None:intergenic 45.0%
CGGACCTTAAATTTCAGCAC+AGG + chr8_1:77445499-77445518 Msa1215960:intron 45.0%
TTATCCATGACTCTTGGCCA+AGG + chr8_1:77445540-77445559 Msa1215960:intron 45.0%
TATCCATGACTCTTGGCCAA+GGG + chr8_1:77445541-77445560 Msa1215960:intron 45.0%
AAGCGAAGAATTGGATCCTC+GGG + chr8_1:77445806-77445825 Msa1215960:CDS 45.0%
!! TCGTTTGGATGGATTGTGGT+AGG - chr8_1:77445837-77445856 None:intergenic 45.0%
TGGTTCTTTGCGCAAAGGAA+TGG + chr8_1:77445863-77445882 Msa1215960:CDS 45.0%
TGGACTTCTCCTAGTGGAAA+AGG + chr8_1:77445906-77445925 Msa1215960:CDS 45.0%
!! TGGAGGGGTATTAGGTTCAT+CGG + chr8_1:77446112-77446131 Msa1215960:intron 45.0%
!! TGTACTGGTTGAATGGAGTC+CGG + chr8_1:77446257-77446276 Msa1215960:intron 45.0%
GATGGTAAATGGAGCATACC+CGG - chr8_1:77446279-77446298 None:intergenic 45.0%
TAACCATCAGCTCCGGTAAA+TGG - chr8_1:77446306-77446325 None:intergenic 45.0%
TTACCGGAGCTGATGGTTAA+TGG + chr8_1:77446307-77446326 Msa1215960:intron 45.0%
GATGGTTAATGGAGCATACC+TGG + chr8_1:77446318-77446337 Msa1215960:intron 45.0%
TAATGGAGCATACCTGGACT+CGG + chr8_1:77446324-77446343 Msa1215960:intron 45.0%
ATTGTCATGCAGGTAGTTGG+CGG + chr8_1:77446398-77446417 Msa1215960:intron 45.0%
ATAGAATTGCCCTGCATCCT+AGG + chr8_1:77446477-77446496 Msa1215960:CDS 45.0%
AACCAAACACCTAGGATGCA+GGG - chr8_1:77446489-77446508 None:intergenic 45.0%
GTTACCTGAACCAAACACCT+AGG - chr8_1:77446497-77446516 None:intergenic 45.0%
TATAGTTGGGGAAAGCTGCT+CGG + chr8_1:77446569-77446588 Msa1215960:intron 45.0%
! TCAAAGAAGCACAACCACAC+AGG - chr8_1:77446789-77446808 None:intergenic 45.0%
GGATATTCTCGTTGTGCCTA+AGG + chr8_1:77446845-77446864 Msa1215960:intron 45.0%
! GCCTAAGGTGTTAGTGTTAG+CGG + chr8_1:77446860-77446879 Msa1215960:intron 45.0%
TAGTCCCACATCGGATAGAT+AGG + chr8_1:77446902-77446921 Msa1215960:intron 45.0%
!! CCTTACAAAACCGGCTTGTA+CGG - chr8_1:77446966-77446985 None:intergenic 45.0%
TCTAACTGACACGGAAATCG+GGG - chr8_1:77446999-77447018 None:intergenic 45.0%
GTACATCGCTCCGTAATTTG+AGG + chr8_1:77447107-77447126 Msa1215960:intron 45.0%
GGTGTACCTTCTCCTGTAAA+AGG + chr8_1:77447137-77447156 Msa1215960:intron 45.0%
! AGTACCCCTTTTACAGGAGA+AGG - chr8_1:77447146-77447165 None:intergenic 45.0%
GTGACTCACATTCCAGCTAA+AGG + chr8_1:77447223-77447242 Msa1215960:intron 45.0%
TCTGGAAGCTTTCCTTTAGC+TGG - chr8_1:77447238-77447257 None:intergenic 45.0%
TATGAGTTTGAAGAGGGGCT+AGG - chr8_1:77447269-77447288 None:intergenic 45.0%
ATCTTCGCTCTACAAACTCG+GGG - chr8_1:77447347-77447366 None:intergenic 45.0%
TGGAACGTTTCCATGGATGT+AGG - chr8_1:77447541-77447560 None:intergenic 45.0%
TTTATCGTTCCCTGTAGCTC+AGG - chr8_1:77447634-77447653 None:intergenic 45.0%
ATTATGTGAGCGATCACTCG+TGG - chr8_1:77447672-77447691 None:intergenic 45.0%
CTCACATAATCCTCCTCTCT+TGG + chr8_1:77447682-77447701 Msa1215960:intron 45.0%
CTCCTCTCTTGGACATGTTT+GGG + chr8_1:77447693-77447712 Msa1215960:intron 45.0%
TCCTCTCTTGGACATGTTTG+GGG + chr8_1:77447694-77447713 Msa1215960:intron 45.0%
! AAGAGGCACATTCCAAGAGA+TGG - chr8_1:77447870-77447889 None:intergenic 45.0%
CATGCAAGCTATGAGCTACA+AGG - chr8_1:77447964-77447983 None:intergenic 45.0%
TCTCTGGATTGTTCTGTCAG+TGG + chr8_1:77448062-77448081 Msa1215960:intron 45.0%
! GGGGCATTTCAACTAACTGA+AGG - chr8_1:77448318-77448337 None:intergenic 45.0%
TGGTGTACAGTAGGTACAGT+GGG - chr8_1:77448356-77448375 None:intergenic 45.0%
TTGGTGTACAGTAGGTACAG+TGG - chr8_1:77448357-77448376 None:intergenic 45.0%
GGGATAGTTCCTAGGTTGTA+GGG - chr8_1:77448411-77448430 None:intergenic 45.0%
!! TGTTCTAGGGGATAGTTCCT+AGG - chr8_1:77448419-77448438 None:intergenic 45.0%
GGAACTATCCCCTAGAACAT+AGG + chr8_1:77448420-77448439 Msa1215960:intron 45.0%
CCGTACATGAAAAGTCGGAT+TGG - chr8_1:77449122-77449141 None:intergenic 45.0%
TGATGGAAGTGATGTGTTCC+GGG + chr8_1:77449642-77449661 Msa1215960:CDS 45.0%
TGGATGGTTAAGAGAGCAGT+TGG + chr8_1:77449794-77449813 Msa1215960:CDS 45.0%
GAACCAAAGCTTGCCTGTTA+GGG + chr8_1:77449816-77449835 Msa1215960:CDS 45.0%
TTTCCCTAACAGGCAAGCTT+TGG - chr8_1:77449822-77449841 None:intergenic 45.0%
ACAACAGAGAAGAAAGGCCT+AGG - chr8_1:77449896-77449915 None:intergenic 45.0%
CATCTTACAGACCAAGTCTG+GGG + chr8_1:77450132-77450151 Msa1215960:intron 45.0%
ATGGAGCATGCAATTCACAC+GGG - chr8_1:77450249-77450268 None:intergenic 45.0%
CATGGAGCATGCAATTCACA+CGG - chr8_1:77450250-77450269 None:intergenic 45.0%
AGCTCGGTTCAATGAACAAC+TGG - chr8_1:77450380-77450399 None:intergenic 45.0%
AATGACACCTCTAGCTACAG+AGG - chr8_1:77450515-77450534 None:intergenic 45.0%
!! TCTGTAGCTAGAGGTGTCAT+TGG + chr8_1:77450514-77450533 Msa1215960:CDS 45.0%
AAATGGCAAGGTCAACGACT+AGG - chr8_1:77450564-77450583 None:intergenic 45.0%
GTCAGAAAGGATGCTCTTCA+AGG + chr8_1:77450734-77450753 Msa1215960:intron 45.0%
!! GTGCCCTAAGGGTATTGTTA+AGG + chr8_1:77450990-77451009 Msa1215960:intron 45.0%
AGGGAATGGATGGAACTGAT+TGG + chr8_1:77451296-77451315 Msa1215960:intron 45.0%
GGGAATGGATGGAACTGATT+GGG + chr8_1:77451297-77451316 Msa1215960:intron 45.0%
! CTTTTATATCCTCGGCTTCG+CGG + chr8_1:77451464-77451483 Msa1215960:intron 45.0%
TGAATCTGCCATACCATTGG+AGG + chr8_1:77451619-77451638 Msa1215960:CDS 45.0%
GCCATACCATTGGAGGTTTA+AGG + chr8_1:77451626-77451645 Msa1215960:CDS 45.0%
TAAACGATGTGCACACCACA+CGG + chr8_1:77451947-77451966 Msa1215960:three_prime_UTR 45.0%
!! ATAAAAAATTTATTAGAATA+AGG - chr8_1:77437106-77437125 None:intergenic 5.0%
!!! ATTTTCAAAAAAATAAATAA+TGG + chr8_1:77438662-77438681 Msa1215960:intron 5.0%
!!! TGATAAAATATTTTAATTTA+AGG + chr8_1:77439591-77439610 Msa1215960:intron 5.0%
!!! GATAAAATATTTTAATTTAA+GGG + chr8_1:77439592-77439611 Msa1215960:intron 5.0%
!!! ATAAATGAATTTTTTTTAAT+GGG - chr8_1:77439880-77439899 None:intergenic 5.0%
!!! TAATAAGATAATAATTTTTT+AGG - chr8_1:77444461-77444480 None:intergenic 5.0%
AGAAGCAGAAGCAGAAGCAG+AGG + chr8_1:77435990-77436009 Msa1215960:five_prime_UTR 50.0%
GAAGCAGAAGCAGAAGCAGA+GGG + chr8_1:77435985-77436004 Msa1215960:five_prime_UTR 50.0%
GTCGTCGGAGTTGAGCAAAT+CGG + chr8_1:77436086-77436105 Msa1215960:CDS 50.0%
TCGTCGGAGTTGAGCAAATC+GGG + chr8_1:77436087-77436106 Msa1215960:CDS 50.0%
GGATCGGAGAGAAGTAGCTT+CGG + chr8_1:77436117-77436136 Msa1215960:CDS 50.0%
GGAGAGAAGTAGCTTCGGTT+GGG + chr8_1:77436122-77436141 Msa1215960:CDS 50.0%
ATGAGGATCGCGCTTGTACA+TGG - chr8_1:77436226-77436245 None:intergenic 50.0%
AGAAGTAGGGGATTGCGTTG+CGG + chr8_1:77436493-77436512 Msa1215960:intron 50.0%
CCGATTAGGAAGGGAGTTGT+TGG + chr8_1:77436771-77436790 Msa1215960:CDS 50.0%
AGTTGTTGGCCCCACACTAA+TGG + chr8_1:77436785-77436804 Msa1215960:CDS 50.0%
AGCTCCTCCACCATTAGTGT+GGG - chr8_1:77436798-77436817 None:intergenic 50.0%
TAGCTCCTCCACCATTAGTG+TGG - chr8_1:77436799-77436818 None:intergenic 50.0%
! ACACTAATGGTGGAGGAGCT+AGG + chr8_1:77436798-77436817 Msa1215960:CDS 50.0%
GTCGCCGAAAAGTCAACGAT+GGG + chr8_1:77436820-77436839 Msa1215960:CDS 50.0%
TCGCCGAAAAGTCAACGATG+GGG + chr8_1:77436821-77436840 Msa1215960:CDS 50.0%
!! CATAGTGCTTTGGAAGGGTG+CGG - chr8_1:77437329-77437348 None:intergenic 50.0%
!! ATTGACTTGGCCTTGCCACA+AGG - chr8_1:77437562-77437581 None:intergenic 50.0%
GCCAAGTCAATGCTTGTGTG+AGG + chr8_1:77437571-77437590 Msa1215960:CDS 50.0%
GTGTGAGGACTTCTTACCTC+AGG + chr8_1:77437586-77437605 Msa1215960:CDS 50.0%
GATTGCTTGTGCTACAGCTG+GGG + chr8_1:77438178-77438197 Msa1215960:intron 50.0%
AAATGCTTCCATCCATCCCC+GGG - chr8_1:77438207-77438226 None:intergenic 50.0%
CAAATGCTTCCATCCATCCC+CGG - chr8_1:77438208-77438227 None:intergenic 50.0%
!! GGAAGTCTATTTCTGGGGGA+AGG + chr8_1:77438314-77438333 Msa1215960:intron 50.0%
!! AGTCTATTTCTGGGGGAAGG+GGG + chr8_1:77438317-77438336 Msa1215960:intron 50.0%
GCTGCACATCTTAGCCAATG+TGG + chr8_1:77439169-77439188 Msa1215960:intron 50.0%
AAGGCCCGGAGACATTGTTA+CGG + chr8_1:77439367-77439386 Msa1215960:intron 50.0%
CGGCAATCATCAAAGTTGGC+TGG + chr8_1:77439387-77439406 Msa1215960:CDS 50.0%
GTAGGCCAGACAGGTTTGAA+GGG + chr8_1:77439409-77439428 Msa1215960:CDS 50.0%
TAGGCCAGACAGGTTTGAAG+GGG + chr8_1:77439410-77439429 Msa1215960:CDS 50.0%
CTATCCCCTTCAAACCTGTC+TGG - chr8_1:77439417-77439436 None:intergenic 50.0%
GACAGGTTTGAAGGGGATAG+TGG + chr8_1:77439417-77439436 Msa1215960:CDS 50.0%
CAACTGCTGGGTCTGAATAG+AGG + chr8_1:77439738-77439757 Msa1215960:intron 50.0%
GAGAGCAAAAGAGGTGGGAA+AGG - chr8_1:77439845-77439864 None:intergenic 50.0%
! TTGGCCTTCCGCTTACGTAT+TGG + chr8_1:77441899-77441918 Msa1215960:intron 50.0%
ACAGCCAATACGTAAGCGGA+AGG - chr8_1:77441906-77441925 None:intergenic 50.0%
CCGATAACACGTTTGCAGCA+TGG - chr8_1:77442456-77442475 None:intergenic 50.0%
GCCCAAAATACAGACGTCAG+TGG - chr8_1:77442799-77442818 None:intergenic 50.0%
ACATTACTGTGCCTAGTGGC+AGG + chr8_1:77443018-77443037 Msa1215960:CDS 50.0%
GTGTCTTGTGCTTGCAGTTC+AGG + chr8_1:77443084-77443103 Msa1215960:intron 50.0%
TTCTTGGTGGAGAGCTGGAT+TGG - chr8_1:77443450-77443469 None:intergenic 50.0%
! GCATTTTCTTGGTGGAGAGC+TGG - chr8_1:77443455-77443474 None:intergenic 50.0%
GGCTGCTGAATCATCGTCAT+CGG + chr8_1:77443565-77443584 Msa1215960:CDS 50.0%
AATTTGTCCGGTCCCGACTT+GGG - chr8_1:77444515-77444534 None:intergenic 50.0%
AAATTTGTCCGGTCCCGACT+TGG - chr8_1:77444516-77444535 None:intergenic 50.0%
! AAGGCGAGAGTGCAGTCATT+CGG - chr8_1:77445152-77445171 None:intergenic 50.0%
!! GGTGGCTGGAATGATGGATA+TGG - chr8_1:77445438-77445457 None:intergenic 50.0%
TTCCAGCCACCCACCTATAA+AGG + chr8_1:77445447-77445466 Msa1215960:intron 50.0%
TCCAGCCACCCACCTATAAA+GGG + chr8_1:77445448-77445467 Msa1215960:intron 50.0%
ATCCATGACTCTTGGCCAAG+GGG + chr8_1:77445542-77445561 Msa1215960:intron 50.0%
CTTCTGACAGAATAGCCCCT+TGG - chr8_1:77445560-77445579 None:intergenic 50.0%
!! GTACTGGTTGAATGGAGTCC+GGG + chr8_1:77446258-77446277 Msa1215960:intron 50.0%
GCTCCATTAACCATCAGCTC+CGG - chr8_1:77446313-77446332 None:intergenic 50.0%
ACGAACATTCAACCGAGTCC+AGG - chr8_1:77446339-77446358 None:intergenic 50.0%
GAACCAAACACCTAGGATGC+AGG - chr8_1:77446490-77446509 None:intergenic 50.0%
! GCATCCTAGGTGTTTGGTTC+AGG + chr8_1:77446490-77446509 Msa1215960:CDS 50.0%
GCCGCTAACACTAACACCTT+AGG - chr8_1:77446864-77446883 None:intergenic 50.0%
TAGTGTTAGCGGCCAACACT+CGG + chr8_1:77446871-77446890 Msa1215960:intron 50.0%
ACTAAATCCCACCCGAGTGT+TGG - chr8_1:77446886-77446905 None:intergenic 50.0%
GGTGGGATTTAGTCCCACAT+CGG + chr8_1:77446893-77446912 Msa1215960:intron 50.0%
!! CCGTACAAGCCGGTTTTGTA+AGG + chr8_1:77446963-77446982 Msa1215960:intron 50.0%
! GAGTGGGGTACTCGAGATTT+AGG - chr8_1:77447612-77447631 None:intergenic 50.0%
CCAAACATGTCCAAGAGAGG+AGG - chr8_1:77447695-77447714 None:intergenic 50.0%
CCTCCTCTCTTGGACATGTT+TGG + chr8_1:77447692-77447711 Msa1215960:intron 50.0%
TCCCCAAACATGTCCAAGAG+AGG - chr8_1:77447698-77447717 None:intergenic 50.0%
GGGGATAGTTCCTAGGTTGT+AGG - chr8_1:77448412-77448431 None:intergenic 50.0%
CCAGAGGCCTCCAAAACAAA+GGG - chr8_1:77448637-77448656 None:intergenic 50.0%
ACCAGAGGCCTCCAAAACAA+AGG - chr8_1:77448638-77448657 None:intergenic 50.0%
TTTGGAGGCCTCTGGTCAAA+TGG + chr8_1:77448642-77448661 Msa1215960:intron 50.0%
AGGAAGCTCCATTTGACCAG+AGG - chr8_1:77448653-77448672 None:intergenic 50.0%
GGAACCAAAGCTTGCCTGTT+AGG + chr8_1:77449815-77449834 Msa1215960:CDS 50.0%
GGATCATCCTCTGTAGCTAG+AGG + chr8_1:77450505-77450524 Msa1215960:CDS 50.0%
GGTTTGTGTCTTTCTGCCTC+TGG + chr8_1:77450591-77450610 Msa1215960:intron 50.0%
TTCTACGCTTTGTGTCCGTG+TGG - chr8_1:77451965-77451984 None:intergenic 50.0%
TGCAGCAGGTTCATCGTCGT+CGG + chr8_1:77436071-77436090 Msa1215960:CDS 55.0%
CGGAGAGAAGTAGCTTCGGT+TGG + chr8_1:77436121-77436140 Msa1215960:CDS 55.0%
TGTTGGCCCCACACTAATGG+TGG + chr8_1:77436788-77436807 Msa1215960:CDS 55.0%
GCTCCTCCACCATTAGTGTG+GGG - chr8_1:77436797-77436816 None:intergenic 55.0%
GGTCGCCGAAAAGTCAACGA+TGG + chr8_1:77436819-77436838 Msa1215960:CDS 55.0%
TGGGGGAAGGGGGTTTGATT+TGG + chr8_1:77438327-77438346 Msa1215960:intron 55.0%
AAGGACATCGGCCTAGAGTG+AGG + chr8_1:77439003-77439022 Msa1215960:CDS 55.0%
GGTAGGCCAGACAGGTTTGA+AGG + chr8_1:77439408-77439427 Msa1215960:CDS 55.0%
! TCCTGCTTTGGATGCCACCT+GGG - chr8_1:77442095-77442114 None:intergenic 55.0%
! ATCCTGCTTTGGATGCCACC+TGG - chr8_1:77442096-77442115 None:intergenic 55.0%
! AGGCGAGAGTGCAGTCATTC+GGG - chr8_1:77445151-77445170 None:intergenic 55.0%
! AGACCATGCGGTCTAGAGTC+TGG + chr8_1:77445202-77445221 Msa1215960:intron 55.0%
TAGGTGGGTGGCTGGAATGA+TGG - chr8_1:77445444-77445463 None:intergenic 55.0%
TCCCTTTATAGGTGGGTGGC+TGG - chr8_1:77445452-77445471 None:intergenic 55.0%
ATTGTGGTAGGAGTGACCCG+AGG - chr8_1:77445825-77445844 None:intergenic 55.0%
GCTCCGGTAAATGGAGCTGA+TGG - chr8_1:77446297-77446316 None:intergenic 55.0%
GCTCCATTTACCGGAGCTGA+TGG + chr8_1:77446300-77446319 Msa1215960:intron 55.0%
TGCCCTGCATCCTAGGTGTT+TGG + chr8_1:77446484-77446503 Msa1215960:CDS 55.0%
AGTGTTAGCGGCCAACACTC+GGG + chr8_1:77446872-77446891 Msa1215960:intron 55.0%
!! CAAAACCGGCTTGTACGGTG+AGG - chr8_1:77446961-77446980 None:intergenic 55.0%
AGGGGCTAGGTCTGCATATC+TGG - chr8_1:77447256-77447275 None:intergenic 55.0%
TACCCCACTCCTGAGCTACA+GGG + chr8_1:77447622-77447641 Msa1215960:intron 55.0%
TTCCCTGTAGCTCAGGAGTG+GGG - chr8_1:77447627-77447646 None:intergenic 55.0%
GTTCCCTGTAGCTCAGGAGT+GGG - chr8_1:77447628-77447647 None:intergenic 55.0%
!!! CCCTTTGTTTTGGAGGCCTC+TGG + chr8_1:77448634-77448653 Msa1215960:intron 55.0%
GACGAGCCAACATGCAGAAG+CGG - chr8_1:77448679-77448698 None:intergenic 55.0%
!! GCATGTTGGCTCGTCTTCTC+CGG + chr8_1:77448684-77448703 Msa1215960:intron 55.0%
CAGAACGAGTGTTTGCTCGC+CGG - chr8_1:77448706-77448725 None:intergenic 55.0%
!! GGTGTCATTGGCCTTGTGCT+AGG + chr8_1:77450526-77450545 Msa1215960:CDS 55.0%
GCGATGGACGCAATTGCAGC+AGG + chr8_1:77436057-77436076 Msa1215960:exon 60.0%
TGGCCCCACACTAATGGTGG+AGG + chr8_1:77436791-77436810 Msa1215960:CDS 60.0%
GGCACTCCTCGCAACAAGTG+TGG - chr8_1:77437905-77437924 None:intergenic 60.0%
GACATCGGCCTAGAGTGAGG+CGG + chr8_1:77439006-77439025 Msa1215960:CDS 60.0%
TGGGCATACCGCCTCACTCT+AGG - chr8_1:77439017-77439036 None:intergenic 60.0%
AGAGTGAGGCGGTATGCCCA+CGG + chr8_1:77439017-77439036 Msa1215960:CDS 60.0%
AGTTGGCTGGTAGGCCAGAC+AGG + chr8_1:77439400-77439419 Msa1215960:CDS 60.0%
ACCCAGGTGGCATCCAAAGC+AGG + chr8_1:77442091-77442110 Msa1215960:intron 60.0%
ACATTGGCCCAAGTCGGGAC+CGG + chr8_1:77444505-77444524 Msa1215960:intron 60.0%
GGACCAGACTCTAGACCGCA+TGG - chr8_1:77445208-77445227 None:intergenic 60.0%
AGCCCCTTGGCCAAGAGTCA+TGG - chr8_1:77445547-77445566 None:intergenic 60.0%
AGGAGCTGCTTGCAACGACC+AGG - chr8_1:77445781-77445800 None:intergenic 60.0%
TTAGCGGCCAACACTCGGGT+GGG + chr8_1:77446876-77446895 Msa1215960:intron 60.0%
GCACTCCTCACCGTACAAGC+CGG + chr8_1:77446953-77446972 Msa1215960:intron 60.0%
GTACCCCACTCCTGAGCTAC+AGG + chr8_1:77447621-77447640 Msa1215960:intron 60.0%
CGTTCCCTGTAGCTCAGGAG+TGG - chr8_1:77447629-77447648 None:intergenic 60.0%
CCAACATGCAGAAGCGGCGT+AGG - chr8_1:77448673-77448692 None:intergenic 60.0%
CCTACGCCGCTTCTGCATGT+TGG + chr8_1:77448670-77448689 Msa1215960:intron 60.0%
! TTTTCCACCCGTGCGACGCA+CGG - chr8_1:77451833-77451852 None:intergenic 60.0%
GTGGGTGTTCGTGCGTGCGA+TGG + chr8_1:77436041-77436060 Msa1215960:exon 65.0%
GTGCTACAGCTGGGGAAGCC+CGG + chr8_1:77438186-77438205 Msa1215960:CDS 65.0%
TGCTACAGCTGGGGAAGCCC+GGG + chr8_1:77438187-77438206 Msa1215960:CDS 65.0%
! GGCGGTATGCCCACGGACTA+AGG + chr8_1:77439024-77439043 Msa1215960:CDS 65.0%
ATTTGGGTGGGGGAGGCTCC+TGG + chr8_1:77440368-77440387 Msa1215960:intron 65.0%
TTTGGGTGGGGGAGGCTCCT+GGG + chr8_1:77440369-77440388 Msa1215960:intron 65.0%
GTTAGCGGCCAACACTCGGG+TGG + chr8_1:77446875-77446894 Msa1215960:intron 65.0%
TGACATGCACCGCGAAGCCG+AGG - chr8_1:77451476-77451495 None:intergenic 65.0%
TGTTCTGCCCGTGCGTCGCA+CGG + chr8_1:77451822-77451841 Msa1215960:three_prime_UTR 65.0%
TTTCCACCCGTGCGACGCAC+GGG - chr8_1:77451832-77451851 None:intergenic 65.0%
GCTACAGCTGGGGAAGCCCG+GGG + chr8_1:77438188-77438207 Msa1215960:CDS 70.0%
TGGGGAAGCCCGGGGATGGA+TGG + chr8_1:77438196-77438215 Msa1215960:CDS 70.0%
GTTCTGCCCGTGCGTCGCAC+GGG + chr8_1:77451823-77451842 Msa1215960:three_prime_UTR 70.0%
CAGCTGGGGAAGCCCGGGGA+TGG + chr8_1:77438192-77438211 Msa1215960:CDS 75.0%
! CTGCCCGTGCGTCGCACGGG+TGG + chr8_1:77451826-77451845 Msa1215960:three_prime_UTR 80.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 77435906 77452172 77435906 ID=Msa1215960;Name=Msa1215960
chr8_1 mRNA 77435906 77452172 77435906 ID=Msa1215960-mRNA-1;Parent=Msa1215960;Name=Msa1215960-mRNA-1;_AED=0.20;_eAED=0.20;_QI=154|0.90|0.95|1|1|1|22|526|772
chr8_1 exon 77435906 77436260 77435906 ID=Msa1215960-mRNA-1:exon:26739;Parent=Msa1215960-mRNA-1
chr8_1 exon 77436768 77436842 77436768 ID=Msa1215960-mRNA-1:exon:26740;Parent=Msa1215960-mRNA-1
chr8_1 exon 77437029 77437082 77437029 ID=Msa1215960-mRNA-1:exon:26741;Parent=Msa1215960-mRNA-1
chr8_1 exon 77437411 77437608 77437411 ID=Msa1215960-mRNA-1:exon:26742;Parent=Msa1215960-mRNA-1
chr8_1 exon 77438179 77438244 77438179 ID=Msa1215960-mRNA-1:exon:26743;Parent=Msa1215960-mRNA-1
chr8_1 exon 77438479 77438537 77438479 ID=Msa1215960-mRNA-1:exon:26744;Parent=Msa1215960-mRNA-1
chr8_1 exon 77438992 77439068 77438992 ID=Msa1215960-mRNA-1:exon:26745;Parent=Msa1215960-mRNA-1
chr8_1 exon 77439370 77439486 77439370 ID=Msa1215960-mRNA-1:exon:26746;Parent=Msa1215960-mRNA-1
chr8_1 exon 77440313 77440347 77440313 ID=Msa1215960-mRNA-1:exon:26747;Parent=Msa1215960-mRNA-1
chr8_1 exon 77441111 77441211 77441111 ID=Msa1215960-mRNA-1:exon:26748;Parent=Msa1215960-mRNA-1
chr8_1 exon 77442097 77442161 77442097 ID=Msa1215960-mRNA-1:exon:26749;Parent=Msa1215960-mRNA-1
chr8_1 exon 77442608 77442679 77442608 ID=Msa1215960-mRNA-1:exon:26750;Parent=Msa1215960-mRNA-1
chr8_1 exon 77442869 77443039 77442869 ID=Msa1215960-mRNA-1:exon:26751;Parent=Msa1215960-mRNA-1
chr8_1 exon 77443426 77443625 77443426 ID=Msa1215960-mRNA-1:exon:26752;Parent=Msa1215960-mRNA-1
chr8_1 exon 77443762 77443828 77443762 ID=Msa1215960-mRNA-1:exon:26753;Parent=Msa1215960-mRNA-1
chr8_1 exon 77445796 77445971 77445796 ID=Msa1215960-mRNA-1:exon:26754;Parent=Msa1215960-mRNA-1
chr8_1 exon 77446410 77446511 77446410 ID=Msa1215960-mRNA-1:exon:26755;Parent=Msa1215960-mRNA-1
chr8_1 exon 77448897 77448944 77448897 ID=Msa1215960-mRNA-1:exon:26756;Parent=Msa1215960-mRNA-1
chr8_1 exon 77449556 77449699 77449556 ID=Msa1215960-mRNA-1:exon:26757;Parent=Msa1215960-mRNA-1
chr8_1 exon 77449788 77449883 77449788 ID=Msa1215960-mRNA-1:exon:26758;Parent=Msa1215960-mRNA-1
chr8_1 exon 77450490 77450591 77450490 ID=Msa1215960-mRNA-1:exon:26759;Parent=Msa1215960-mRNA-1
chr8_1 exon 77451554 77452172 77451554 ID=Msa1215960-mRNA-1:exon:26760;Parent=Msa1215960-mRNA-1
chr8_1 five_prime_UTR 77435906 77436059 77435906 ID=Msa1215960-mRNA-1:five_prime_utr;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77436060 77436260 77436060 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77436768 77436842 77436768 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77437029 77437082 77437029 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77437411 77437608 77437411 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77438179 77438244 77438179 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77438479 77438537 77438479 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77438992 77439068 77438992 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77439370 77439486 77439370 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77440313 77440347 77440313 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77441111 77441211 77441111 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77442097 77442161 77442097 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77442608 77442679 77442608 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77442869 77443039 77442869 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77443426 77443625 77443426 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77443762 77443828 77443762 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77445796 77445971 77445796 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77446410 77446511 77446410 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77448897 77448944 77448897 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77449556 77449699 77449556 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77449788 77449883 77449788 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77450490 77450591 77450490 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 CDS 77451554 77451646 77451554 ID=Msa1215960-mRNA-1:cds;Parent=Msa1215960-mRNA-1
chr8_1 three_prime_UTR 77451647 77452172 77451647 ID=Msa1215960-mRNA-1:three_prime_utr;Parent=Msa1215960-mRNA-1
Gene Sequence

>Msa1215960

ATGGACGCAATTGCAGCAGGTTCATCGTCGTCGGAGTTGAGCAAATCGGGTAGCAAAGGATCGGAGAGAAGTAGCTTCGGTTGGGTATATCACTTAGGAGTCAATTCCATTGGTCGTCAGTATTGTCATCTTCGTTTTCTTTTGATTAGAGGAAAGTATGTTTCCATGTACAAGCGCGATCCTCATGAAAACCCTGCCATTAAACCGATTAGGAAGGGAGTTGTTGGCCCCACACTAATGGTGGAGGAGCTAGGTCGCCGAAAAGTCAACGATGGGGATCTTTATGTTTTACGGTTTTACAATCGATTAGATGAGGCCAGAAAGGGAGAAGTTAAATGCCAGTGTTGTAATTCGTTAATATCCCAGCATACACTAAGTGCAAAAACCACAATGAGTGTCTCATCTTGTAGACTGAGAATTGAGATCCATCTATGCGAACTTTACCCAAAGTTGCAGGATTTGGAACTCATTGAAAACACCTTGTGGCAAGGCCAAGTCAATGCTTGTGTGAGGACTTCTTACCTCAGGATTGCTTGTGCTACAGCTGGGGAAGCCCGGGGATGGATGGAAGCATTTGATCATGCCAAGCAACAGGCCGAGTATGAATTGTCAAGTGGTGGTAGTGCCAGAGACAGACTAAACATGGAGGCCGAGATCAATCTTGAAGGACATCGGCCTAGAGTGAGGCGGTATGCCCACGGACTAAGGAAGCTAATAAAAATTGGCCAAGGCCCGGAGACATTGTTACGGCAATCATCAAAGTTGGCTGGTAGGCCAGACAGGTTTGAAGGGGATAGTGGAGACACAGTTGAAGCACATCAATGGAAATGTGTCCATACTGTGGCTGGAATAAGAATTTTCAAGGATGTTTCTGATCACAAGAATGGTAAGGGTGTCCTTGCAAAATCTGTCGGTGTTATTGATGCAACTGCAGATACTGTTTTTGAAGTACTTCTCAGCACTGAACGACTGAAAAGATATGAGTGGCATCCAAAGCAGGATTTTGTCTTCTCTCGTCAATGGTTTCGTGGACAAGATGGAGCATACACAATCTTGCAATTTCCAGCTATACATAAGAAAAAGCCTCAAAGATCTGGTTATCGACGTGCAAAAATTAATCCATCTACATGGGAGATCAGAAATTTGAACGCACCTATGGGATCAAATAGCCCAAAATGTCTAGTGACCCACACTTTGGAGATACATTCTGAATCCTGGAATCGATGGAAGAACAAACGGTGCTCAAAATTTGAGAGCAGCATTCCTTACACATTACTGTGCCTAGTGGCAGGTCTAAAGGAATACATTGCAGCCAATCCAGCTCTCCACCAAGAAAATGCCACCACAATAGTTCACTCCAAAATATCTGATGCTTCCATTTCCAGTTCTGAATATGAAGATGAAGTACAAGATGAGTTTTATGATGCAATGGCTGCTGAATCATCGTCATCGGATGAAGAAAGTGGCGATGATGAGAAGCATGATCAAAAGGAGTCAAGAGTCAAACTAAAGAATGTTTCATGGGCAATTGCAACCTTAGCTTTGAAGCGAACTGCAGCTCCTGATCTAAGCGAAGAATTGGATCCTCGGGTCACTCCTACCACAATCCATCCAAACGACATACATGGTTCTTTGCGCAAAGGAATGGATGACAATGACACAAATTGTTGGACTTCTCCTAGTGGAAAAGGATTTATGATTAGAGGAAAGAACTATCTTAAAGATAATTCTAAGGTAGTTGGCGGAGATCCTCTTCTTAAGCTCATAGCAGTAGATTGGTTTACAGTCAACAAATCTGTAGATAGAATTGCCCTGCATCCTAGGTGTTTGGTTCAGTCAGAAGTCGGCAAAAAGCTTCCATTTATCCTTGTCGTTAATCTGCAGGTTCCTGCTAAACCAAACTACAGTTTGGTTCTATACTATGCAGCTGACAGACCAATAAATAAAAAATCTCTGTTGGCTAAGTTTGTTGATGGAAGTGATGTGTTCCGGGACTCGAGATTCAAACTTATTCCAAGTATAGTTGAGGGATATTGGATGGTTAAGAGAGCAGTTGGAACCAAAGCTTGCCTGTTAGGGAAAGCTGTAACTTGTAAATATTTCAGACAAGATAACTTTTTGGAGATTGACGTGGATATTGGATCATCCTCTGTAGCTAGAGGTGTCATTGGCCTTGTGCTAGGATATGTTACAAGCCTAGTCGTTGACCTTGCCATTTTGATAGAGGCAAAAGAAGAGGCTGAGCTACCAGAATACATTCTTGGAACTGTCCGATTAAACCGTTTGAAACTTGAATCTGCCATACCATTGGAGGTTTAA
Protein sequence

>Msa1215960

MDAIAAGSSSSELSKSGSKGSERSSFGWVYHLGVNSIGRQYCHLRFLLIRGKYVSMYKRDPHENPAIKPIRKGVVGPTLMVEELGRRKVNDGDLYVLRFYNRLDEARKGEVKCQCCNSLISQHTLSAKTTMSVSSCRLRIEIHLCELYPKLQDLELIENTLWQGQVNACVRTSYLRIACATAGEARGWMEAFDHAKQQAEYELSSGGSARDRLNMEAEINLEGHRPRVRRYAHGLRKLIKIGQGPETLLRQSSKLAGRPDRFEGDSGDTVEAHQWKCVHTVAGIRIFKDVSDHKNGKGVLAKSVGVIDATADTVFEVLLSTERLKRYEWHPKQDFVFSRQWFRGQDGAYTILQFPAIHKKKPQRSGYRRAKINPSTWEIRNLNAPMGSNSPKCLVTHTLEIHSESWNRWKNKRCSKFESSIPYTLLCLVAGLKEYIAANPALHQENATTIVHSKISDASISSSEYEDEVQDEFYDAMAAESSSSDEESGDDEKHDQKESRVKLKNVSWAIATLALKRTAAPDLSEELDPRVTPTTIHPNDIHGSLRKGMDDNDTNCWTSPSGKGFMIRGKNYLKDNSKVVGGDPLLKLIAVDWFTVNKSVDRIALHPRCLVQSEVGKKLPFILVVNLQVPAKPNYSLVLYYAADRPINKKSLLAKFVDGSDVFRDSRFKLIPSIVEGYWMVKRAVGTKACLLGKAVTCKYFRQDNFLEIDVDIGSSSVARGVIGLVLGYVTSLVVDLAILIEAKEEAELPEYILGTVRLNRLKLESAIPLEV*