AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1303720


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1303720 MtrunA17_Chr4g0070171 98.982 491 5 0 1 491 1 491 0.0 1011
Msa1303720 MtrunA17_Chr2g0301361 81.429 490 87 1 2 491 3 488 0.0 808
Msa1303720 MtrunA17_Chr1g0204841 54.348 460 198 5 33 491 23 471 9.31e-176 502
Msa1303720 MtrunA17_Chr8g0388511 52.368 380 180 1 69 447 6 385 4.40e-149 431
Msa1303720 MtrunA17_Chr4g0052121 52.278 417 187 7 79 491 57 465 1.21e-139 410
Msa1303720 MtrunA17_Chr1g0183091 41.463 451 227 9 70 488 23 468 1.63e-99 307
Msa1303720 MtrunA17_Chr8g0388551 42.353 255 94 4 57 311 16 217 2.97e-62 206
Msa1303720 MtrunA17_Chr8g0388531 46.078 204 107 2 57 259 24 225 2.99e-58 192
Msa1303720 MtrunA17_Chr8g0388561 52.326 172 78 2 319 490 1 168 6.39e-58 189
Msa1303720 MtrunA17_Chr8g0388541 42.857 182 46 2 264 445 1 124 7.27e-43 148
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1303720 AT1G74960.1 80.645 465 80 4 36 491 78 541 0.0 764
Msa1303720 AT1G74960.3 80.645 465 80 4 36 491 78 541 0.0 764
Msa1303720 AT1G74960.2 80.645 465 80 4 36 491 78 541 0.0 764
Msa1303720 AT5G46290.1 56.674 427 183 2 66 491 47 472 1.64e-177 507
Msa1303720 AT5G46290.3 54.853 443 182 3 66 491 47 488 7.32e-175 501
Msa1303720 AT5G46290.2 45.902 427 174 4 66 491 47 417 1.00e-128 380
Msa1303720 AT2G04540.1 39.726 438 228 8 79 488 30 459 1.35e-93 292

Find 156 sgRNAs with CRISPR-Local

Find 501 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATTCTCTTTACAAATTT+TGG 0.039644 8_3:+66991846 None:intergenic
TGAAATCTGCTTCATTTATA+AGG 0.169329 8_3:+66987985 None:intergenic
TAACATACCACGTCTTTATC+TGG 0.180757 8_3:+66988208 None:intergenic
TGTCCAATTCATTTGGATTT+GGG 0.215616 8_3:-66988035 Msa1303720:CDS
ATATATTGACTTAACATTAA+TGG 0.223801 8_3:+66987400 None:intergenic
CAAATTCAATGGATCTCTTC+TGG 0.237370 8_3:+66994012 None:intergenic
AAGTGGCTGTTATTGTTAAA+AGG 0.241036 8_3:+66987641 None:intergenic
TTGTCCAATTCATTTGGATT+TGG 0.255395 8_3:-66988036 Msa1303720:CDS
CAGCTTCACCTCTGATGATA+TGG 0.266974 8_3:+66991242 None:intergenic
TTCTTTCTTCAGAGGATTGC+TGG 0.283303 8_3:-66991906 Msa1303720:intron
GCTGTAGAGATAGAATAATT+TGG 0.292211 8_3:+66991304 None:intergenic
CAAGCTCTGATTCATTGTTT+TGG 0.300298 8_3:-66988603 Msa1303720:CDS
GAAATCTGCTTCATTTATAA+GGG 0.301497 8_3:+66987986 None:intergenic
ACTACCCGTCTTTGCTTTGT+AGG 0.309185 8_3:+66992120 None:intergenic
TTAGCATGAATGGCTGAAAT+AGG 0.330445 8_3:-66987687 Msa1303720:three_prime_UTR
GTAGCCATTGAAATTGAAAA+TGG 0.338481 8_3:+66993871 None:intergenic
CAACACATTGCCTTGGTACT+TGG 0.338724 8_3:+66987836 None:intergenic
AACATATATGCAGAATTTCT+TGG 0.340556 8_3:-66990062 Msa1303720:CDS
CCCATATTTGTTGTTGCAAA+AGG 0.351308 8_3:+66991490 None:intergenic
AAATTATTGTAGAAGATATC+TGG 0.354741 8_3:+66992057 None:intergenic
TAGAAGGATCGGTATTCCTT+TGG 0.356304 8_3:+66990889 None:intergenic
GCTGCCTTGTCCAATTCATT+TGG 0.357742 8_3:-66988042 Msa1303720:CDS
TAAAACAATGGCAGTAGCTT+TGG 0.360494 8_3:-66992178 Msa1303720:CDS
GCCGATTAAAACTCCACATT+TGG 0.361881 8_3:+66991734 None:intergenic
TGCAGGTTTGGGAGGCTTTG+TGG 0.372324 8_3:-66990928 Msa1303720:intron
GACTCTGCTATTATTCCAAT+TGG 0.379283 8_3:-66991030 Msa1303720:intron
AGAAGGATCGGTATTCCTTT+GGG 0.380892 8_3:+66990890 None:intergenic
TATTAACTCTACTCCTTGGT+TGG 0.387472 8_3:-66987811 Msa1303720:three_prime_UTR
CTGTAGGATGTGATGCTTTG+TGG 0.388921 8_3:-66991060 Msa1303720:intron
TAGTCTTTATAAACTCTATA+TGG 0.391602 8_3:+66994098 None:intergenic
GGGAGGCTTTGTGGCATGCC+GGG 0.392119 8_3:-66990919 Msa1303720:CDS
AACACCATCTGGTGATCTTA+AGG 0.395194 8_3:-66988631 Msa1303720:CDS
TGTTAAAAGGTTACATCAAA+GGG 0.396595 8_3:+66987654 None:intergenic
TGGGAGGCTTTGTGGCATGC+CGG 0.403976 8_3:-66990920 Msa1303720:CDS
TGTAGGATGTGATGCTTTGT+GGG 0.408063 8_3:-66991059 Msa1303720:intron
CTGTAGAGATAGAATAATTT+GGG 0.409092 8_3:+66991305 None:intergenic
TCCTTGATATATAGGCAATC+AGG 0.410362 8_3:-66988267 Msa1303720:intron
CGGGTAGTTGTGACAGGCTT+GGG 0.416581 8_3:-66992105 Msa1303720:CDS
CAGGATACTAAAGTGCTTGT+AGG 0.417582 8_3:-66988093 Msa1303720:CDS
TTCTAAAGCATCACGCCCTT+GGG 0.417588 8_3:-66990871 Msa1303720:CDS
CATTCAATGTTATAGTACTC+TGG 0.424332 8_3:-66987375 Msa1303720:three_prime_UTR
CTCAGCATTAGGTGGCTTCA+AGG 0.426165 8_3:-66991712 Msa1303720:intron
ATCCTCTATCTTAGCATGAA+TGG 0.429993 8_3:-66987697 Msa1303720:three_prime_UTR
GAAGAAGGATTCAAATTCAA+TGG 0.436585 8_3:+66994001 None:intergenic
TTTCTTTGTTGTGACCTCTT+GGG 0.437189 8_3:+66992149 None:intergenic
TTCTACAATAATTTACTCAA+TGG 0.438814 8_3:-66992048 Msa1303720:CDS
CAAGGGCGTGATGCTTTAGA+AGG 0.444832 8_3:+66990873 None:intergenic
CTTCTAAAGCATCACGCCCT+TGG 0.452651 8_3:-66990872 Msa1303720:CDS
TTATGGATTGCAGGGATGGA+TGG 0.453393 8_3:-66991329 Msa1303720:intron
GTGTAATACTTTGCATTGAA+AGG 0.455280 8_3:-66988716 Msa1303720:CDS
TGCATATTAACTCTACTCCT+TGG 0.459170 8_3:-66987815 Msa1303720:three_prime_UTR
GTTGAGATTACCAGAATGAA+TGG 0.462504 8_3:+66993702 None:intergenic
TATTCCTTTGGGAGAGTGCC+CGG 0.462858 8_3:+66990901 None:intergenic
ACCAAAATTTGTAAAGAGAA+TGG 0.463226 8_3:-66991847 Msa1303720:CDS
GAAGAAGAGGAAGATGAAGT+TGG 0.464566 8_3:+66993954 None:intergenic
TTTGTTGTGACCTCTTGGGC+AGG 0.466126 8_3:+66992153 None:intergenic
TCTATGATCGGTCATCTACT+AGG 0.466821 8_3:-66988408 Msa1303720:CDS
AGCCATTCATGCTAAGATAG+AGG 0.467064 8_3:+66987695 None:intergenic
CATTCATGTTATTATAAAGA+AGG 0.467067 8_3:-66987952 Msa1303720:intron
TGCCATGCTTGCAATGGACC+TGG 0.470104 8_3:-66991464 Msa1303720:intron
TATGGATTGCAGGGATGGAT+GGG 0.470852 8_3:-66991328 Msa1303720:intron
GATATATAGGCAATCAGGAC+AGG 0.472204 8_3:-66988262 Msa1303720:intron
GTCCAATTCATTTGGATTTG+GGG 0.482433 8_3:-66988034 Msa1303720:CDS
ATTAACTCTACTCCTTGGTT+GGG 0.485007 8_3:-66987810 Msa1303720:three_prime_UTR
TGTAATACTTTGCATTGAAA+GGG 0.485379 8_3:-66988715 Msa1303720:CDS
AAGCTTTACGAATATCATAT+AGG 0.488975 8_3:-66991534 Msa1303720:CDS
AACATACCACGTCTTTATCT+GGG 0.492113 8_3:+66988209 None:intergenic
CATGCTACATCAACACCATC+TGG 0.494547 8_3:-66988642 Msa1303720:CDS
GTGCTTGTGGTGGGAGCGAG+TGG 0.498612 8_3:-66987724 Msa1303720:three_prime_UTR
TTGTTAAAAGGTTACATCAA+AGG 0.502752 8_3:+66987653 None:intergenic
AAAAGAGAGATTGAAAATCA+AGG 0.505177 8_3:-66988064 Msa1303720:CDS
AGTTGTGACAGGCTTGGGTG+TGG 0.505911 8_3:-66992100 Msa1303720:CDS
TTGGGTGTGGTTACACCACT+TGG 0.507317 8_3:-66992087 Msa1303720:CDS
AACAATAACAGCCACTTGGT+TGG 0.513070 8_3:-66987635 Msa1303720:three_prime_UTR
ACTTTGCATTGAAAGGGCAT+TGG 0.518153 8_3:-66988709 Msa1303720:CDS
ATTCAATGTTATAGTACTCT+GGG 0.518715 8_3:-66987374 Msa1303720:three_prime_UTR
AACCAGGTCCATTGCAAGCA+TGG 0.519213 8_3:+66991462 None:intergenic
GTTGCAAAAGGAATACAGAA+AGG 0.520951 8_3:+66991502 None:intergenic
CAAAACAATGAATCAGAGCT+TGG 0.527059 8_3:+66988604 None:intergenic
GGGCTCTGCCATGCTTGCAA+TGG 0.527741 8_3:-66991470 Msa1303720:CDS
AACTTCCTACAAAGCAAAGA+CGG 0.528880 8_3:-66992125 Msa1303720:CDS
AGAAGAATTGGAGCATGCTA+AGG 0.530198 8_3:-66990308 Msa1303720:intron
GAAGAAGAGTGAGAAGAAGA+AGG 0.530298 8_3:+66993986 None:intergenic
AATCGTGATGGATTTGTCAT+GGG 0.531302 8_3:-66990355 Msa1303720:CDS
TGCTTGTGGTGGGAGCGAGT+GGG 0.535389 8_3:-66987723 Msa1303720:three_prime_UTR
GAGAGTGAGACAGAGAGAGA+TGG 0.537078 8_3:+66994067 None:intergenic
GAATCGTGATGGATTTGTCA+TGG 0.538209 8_3:-66990356 Msa1303720:CDS
ACGGGTAGTTGTGACAGGCT+TGG 0.538612 8_3:-66992106 Msa1303720:CDS
CAAAGACGGGTAGTTGTGAC+AGG 0.539386 8_3:-66992111 Msa1303720:CDS
GAAAGGGCATTGGTCCAGTC+GGG 0.540117 8_3:-66988699 Msa1303720:CDS
TGCTACAGCTTCTACACCAC+CGG 0.544236 8_3:+66988380 None:intergenic
TAGATATGTGGTGCTTGTGG+TGG 0.544326 8_3:-66987734 Msa1303720:three_prime_UTR
TCCAATTCATTTGGATTTGG+GGG 0.545367 8_3:-66988033 Msa1303720:CDS
TAATATGCAACACATTGCCT+TGG 0.545959 8_3:+66987829 None:intergenic
ATGCTCTATCTGCTAACAGC+GGG 0.552465 8_3:-66991816 Msa1303720:CDS
TGATATTCGTAAAGCTTCGA+TGG 0.552755 8_3:+66991540 None:intergenic
AGATTACCAGAATGAATGGA+TGG 0.556232 8_3:+66993706 None:intergenic
TTCACCTCTGATGATATGGT+TGG 0.556394 8_3:+66991246 None:intergenic
TGAAAGGGCATTGGTCCAGT+CGG 0.557532 8_3:-66988700 Msa1303720:CDS
GGTGAAAATATATATTGAGA+GGG 0.562037 8_3:-66987789 Msa1303720:three_prime_UTR
GGTCATCTACTAGGTGCATC+CGG 0.562316 8_3:-66988399 Msa1303720:CDS
AAATCTGCTTCATTTATAAG+GGG 0.568170 8_3:+66987987 None:intergenic
TTTCATATCAGTAGTACACC+TGG 0.568430 8_3:-66987576 Msa1303720:three_prime_UTR
GGGTGAAAATATATATTGAG+AGG 0.568717 8_3:-66987790 Msa1303720:three_prime_UTR
CGTGTAGAGTGATGAAGAAG+TGG 0.569747 8_3:+66993849 None:intergenic
ATGCACTTTCTGATTCTACA+AGG 0.570287 8_3:+66987756 None:intergenic
TCAAATTTGAATGAATCTCA+AGG 0.571715 8_3:+66987502 None:intergenic
TAAAATTTACCATCAGGATG+TGG 0.576322 8_3:+66990002 None:intergenic
AGATATGTGGTGCTTGTGGT+GGG 0.577119 8_3:-66987733 Msa1303720:three_prime_UTR
GTTAAAAGGTTACATCAAAG+GGG 0.577401 8_3:+66987655 None:intergenic
AATTTACTCAATGGTGTCAG+TGG 0.582043 8_3:-66992039 Msa1303720:CDS
ACTTCCTACAAAGCAAAGAC+GGG 0.585727 8_3:-66992124 Msa1303720:CDS
GTAGGATGTGATGCTTTGTG+GGG 0.586382 8_3:-66991058 Msa1303720:intron
ATATTTGGTGCAGGTTTGGG+AGG 0.586750 8_3:-66990936 Msa1303720:intron
AGAAGCTGTAGCAACAGTAC+AGG 0.589449 8_3:-66988370 Msa1303720:intron
ATGATATTACAGAATCGTGA+TGG 0.590365 8_3:-66990367 Msa1303720:intron
AATTCTACAAAATCTATGAT+CGG 0.591524 8_3:-66988420 Msa1303720:CDS
GCGTGATGCTTTAGAAGGAT+CGG 0.592328 8_3:+66990878 None:intergenic
ATATATGCAGAATTTCTTGG+TGG 0.592841 8_3:-66990059 Msa1303720:CDS
GAGTTAGATAAAACCAAATG+TGG 0.595646 8_3:-66991747 Msa1303720:CDS
CACGTGACTGACATGCAAGA+TGG 0.595899 8_3:+66993817 None:intergenic
GTGAAAATATATATTGAGAG+GGG 0.599497 8_3:-66987788 Msa1303720:three_prime_UTR
AGTGAAAAGATGTTCTGATA+CGG 0.601809 8_3:+66993785 None:intergenic
TGGAATTACTGAAGATGTGA+TGG 0.603643 8_3:-66991772 Msa1303720:CDS
AGTCACGTGATATGCATCGC+AGG 0.603663 8_3:+66990028 None:intergenic
ATCGTGATGGATTTGTCATG+GGG 0.604178 8_3:-66990354 Msa1303720:CDS
TCAGAAAGTGCATAGATATG+TGG 0.608993 8_3:-66987746 Msa1303720:three_prime_UTR
ATAAGTATTACAGTATCCCA+AGG 0.611602 8_3:+66990855 None:intergenic
CTTCTTCATCACTCTACACG+TGG 0.613055 8_3:-66993846 Msa1303720:CDS
GCATAGATATGTGGTGCTTG+TGG 0.616135 8_3:-66987737 Msa1303720:three_prime_UTR
CATGCCGGGCACTCTCCCAA+AGG 0.617185 8_3:-66990905 Msa1303720:CDS
AGCTTTGGAACCTGCCCAAG+AGG 0.621929 8_3:-66992163 Msa1303720:CDS
TTAAAAGGTTACATCAAAGG+GGG 0.624131 8_3:+66987656 None:intergenic
CCAGTCGGGAGTTTCAAAAG+AGG 0.627585 8_3:-66988685 Msa1303720:CDS
CAAATTTCAAGGTAAAACAA+TGG 0.631881 8_3:-66992190 Msa1303720:intron
TTAATCGGCTCAGCATTAGG+TGG 0.634657 8_3:-66991720 Msa1303720:CDS
ATATATAGGCAATCAGGACA+GGG 0.638829 8_3:-66988261 Msa1303720:intron
GTGACTGAGCCACATCCTGA+TGG 0.640223 8_3:-66990011 Msa1303720:intron
TAGTACACCTGGCTGCACAT+TGG 0.641041 8_3:-66987565 Msa1303720:three_prime_UTR
TGAAAATGGAGAAAAGATCG+AGG 0.650501 8_3:+66993885 None:intergenic
GCAGCCAACCATATCATCAG+AGG 0.652104 8_3:-66991250 Msa1303720:CDS
ATAGGCAATCAGGACAGGGT+GGG 0.653135 8_3:-66988257 Msa1303720:intron
TAAAAGGTTACATCAAAGGG+GGG 0.659156 8_3:+66987657 None:intergenic
TAGGATGTGATGCTTTGTGG+GGG 0.661354 8_3:-66991057 Msa1303720:CDS
TATAGGCAATCAGGACAGGG+TGG 0.670479 8_3:-66988258 Msa1303720:intron
AAATCCAAATGAATTGGACA+AGG 0.671343 8_3:+66988038 None:intergenic
AAAAGGTTACATCAAAGGGG+GGG 0.679033 8_3:+66987658 None:intergenic
CATCTACTAGGTGCATCCGG+TGG 0.679685 8_3:-66988396 Msa1303720:CDS
TATTCCTTAAGATCACCAGA+TGG 0.680897 8_3:+66988627 None:intergenic
TATGCTCTATCTGCTAACAG+CGG 0.684258 8_3:-66991817 Msa1303720:CDS
ATATCTGGATCATGACCAAG+TGG 0.685208 8_3:+66992072 None:intergenic
CTCACAGTTACCAAGTACCA+AGG 0.694389 8_3:-66987846 Msa1303720:intron
TAAGTATTACAGTATCCCAA+GGG 0.698845 8_3:+66990856 None:intergenic
GTATATGATAGCCAACCAAG+TGG 0.704574 8_3:+66987624 None:intergenic
TCGTGATGGATTTGTCATGG+GGG 0.752537 8_3:-66990353 Msa1303720:CDS
TGAAAACCCAGATAAAGACG+TGG 0.755345 8_3:-66988215 Msa1303720:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAAAACATGAATAA+TGG + chr8_3:66989353-66989372 None:intergenic 10.0%
!! GGATAAAAAAAATAAAAAAT+AGG + chr8_3:66990774-66990793 None:intergenic 10.0%
!! ATATATAATAAAACTATTTC+TGG - chr8_3:66991798-66991817 Msa1303720:CDS 10.0%
!!! TTCTTAATTGTTATTATTAA+TGG - chr8_3:66993100-66993119 Msa1303720:intron 10.0%
!!! TTTATTTTATTAAAAGCTTG+TGG - chr8_3:66987984-66988003 Msa1303720:exon 15.0%
!!! TTATTTTATTAAAAGCTTGT+GGG - chr8_3:66987985-66988004 Msa1303720:exon 15.0%
!!! TTTGATTCATTTTTATTCAT+GGG - chr8_3:66988065-66988084 Msa1303720:CDS 15.0%
!! TGAATGAAAATTATAATGTT+TGG - chr8_3:66988141-66988160 Msa1303720:intron 15.0%
!! TTGTTGAAAAAATTTATAGT+AGG - chr8_3:66989048-66989067 Msa1303720:intron 15.0%
!! AATTAAATAAAACTTACTGT+CGG + chr8_3:66989621-66989640 None:intergenic 15.0%
!!! TACTTTAATATATTAGTTCT+TGG - chr8_3:66990387-66990406 Msa1303720:intron 15.0%
!!! ACTTTAATATATTAGTTCTT+GGG - chr8_3:66990388-66990407 Msa1303720:intron 15.0%
!!! ATAAATATGAAATTTTCTGT+AGG - chr8_3:66990521-66990540 Msa1303720:intron 15.0%
!! AAATAAAAGAAATTACCAAT+TGG + chr8_3:66990585-66990604 None:intergenic 15.0%
!! ATTATTAATCCAATGATATT+TGG - chr8_3:66990646-66990665 Msa1303720:intron 15.0%
!!! TTCTATTCCTTATAAATTTT+AGG + chr8_3:66990976-66990995 None:intergenic 15.0%
!!! TGATAGCTTTATTTAATTTA+GGG + chr8_3:66991453-66991472 None:intergenic 15.0%
!! TAATTAAGAATAACATGAAA+AGG + chr8_3:66993042-66993061 None:intergenic 15.0%
!! ATAATTTCTAAATAATGAGA+TGG - chr8_3:66993274-66993293 Msa1303720:intron 15.0%
!!! ATATATTGACTTAACATTAA+TGG + chr8_3:66994200-66994219 None:intergenic 15.0%
!! AGATTGCAGAAAAAATAAAA+AGG - chr8_3:66987390-66987409 Msa1303720:three_prime_UTR 20.0%
!! AGAAAAAATAAAAAGGAGAA+AGG - chr8_3:66987397-66987416 Msa1303720:three_prime_UTR 20.0%
!! TAGTCTTTATAAACTCTATA+TGG + chr8_3:66987502-66987521 None:intergenic 20.0%
!!! TTTTTGTTTGGTATTGAAAT+TGG + chr8_3:66987871-66987890 None:intergenic 20.0%
!!! GTTTGATTCATTTTTATTCA+TGG - chr8_3:66988064-66988083 Msa1303720:CDS 20.0%
!! TGAAAATTATAATGTTTGGT+TGG - chr8_3:66988145-66988164 Msa1303720:intron 20.0%
!!! TAAAATGATAACGATTTTGA+GGG + chr8_3:66988256-66988275 None:intergenic 20.0%
!!! ATTTTTCATCAATAATAACG+AGG + chr8_3:66988713-66988732 None:intergenic 20.0%
!! TGATATTATATCTTGTCATA+TGG + chr8_3:66989196-66989215 None:intergenic 20.0%
!! AAATTATTGTAGAAGATATC+TGG + chr8_3:66989543-66989562 None:intergenic 20.0%
!! TTCTACAATAATTTACTCAA+TGG - chr8_3:66989549-66989568 Msa1303720:intron 20.0%
!!! AGCTTCAATTTTTTTTTTGT+TGG - chr8_3:66990221-66990240 Msa1303720:intron 20.0%
!!! GCTTCAATTTTTTTTTTGTT+GGG - chr8_3:66990222-66990241 Msa1303720:intron 20.0%
!! AAAGAATGAAGATAACTAAA+AGG + chr8_3:66990444-66990463 None:intergenic 20.0%
!! TTCATATTTATCAAAACTGT+TGG + chr8_3:66990512-66990531 None:intergenic 20.0%
!!! TTTTTATTTTTTGGCTAGTA+TGG - chr8_3:66990603-66990622 Msa1303720:intron 20.0%
!! TTGGATTAATAATAGAGTTA+TGG + chr8_3:66990639-66990658 None:intergenic 20.0%
!! AAAGATTACTATAAAACTCA+AGG + chr8_3:66990830-66990849 None:intergenic 20.0%
!!! ATAAAATGATATGCAACTTT+TGG + chr8_3:66990930-66990949 None:intergenic 20.0%
!!! TATTCCTTATAAATTTTAGG+TGG + chr8_3:66990973-66990992 None:intergenic 20.0%
!! AAATACAAACTAAAAACTAC+AGG + chr8_3:66991154-66991173 None:intergenic 20.0%
!!! TAAAAATGTTTTAAAGAGTG+TGG + chr8_3:66991426-66991445 None:intergenic 20.0%
!!! GTGATAGCTTTATTTAATTT+AGG + chr8_3:66991454-66991473 None:intergenic 20.0%
!! CTCATAAAAAAGACATTAAA+AGG + chr8_3:66991623-66991642 None:intergenic 20.0%
!! TCTTAAAAATCTGAATAGTA+TGG + chr8_3:66991727-66991746 None:intergenic 20.0%
!! AATGACTATCATTTATCATT+TGG - chr8_3:66991923-66991942 Msa1303720:intron 20.0%
!!! AAAATTTTAAGATAACAGGA+TGG + chr8_3:66992111-66992130 None:intergenic 20.0%
!!! TCCTGTTATCTTAAAATTTT+TGG - chr8_3:66992111-66992130 Msa1303720:CDS 20.0%
!!! TCCAAAAATTTTAAGATAAC+AGG + chr8_3:66992115-66992134 None:intergenic 20.0%
!! ACACAAAATTAGAAATGTAA+AGG + chr8_3:66992205-66992224 None:intergenic 20.0%
!! TATGATATCTTCTTAGAATT+TGG - chr8_3:66992583-66992602 Msa1303720:intron 20.0%
!!! TTTTTTATCCAATCGAAAAT+AGG - chr8_3:66992853-66992872 Msa1303720:intron 20.0%
!!! TTTTTATCCAATCGAAAATA+GGG - chr8_3:66992854-66992873 Msa1303720:intron 20.0%
!! GCTGTATAAATAAAACATAT+TGG + chr8_3:66993149-66993168 None:intergenic 20.0%
!! AATTCTACAAAATCTATGAT+CGG - chr8_3:66993177-66993196 Msa1303720:intron 20.0%
!! TGTTTGAATTACATAAAAAC+AGG - chr8_3:66993485-66993504 Msa1303720:intron 20.0%
!! CATTCATGTTATTATAAAGA+AGG - chr8_3:66993645-66993664 Msa1303720:intron 20.0%
!! TTCTCCATTTTCAATTTCAA+TGG - chr8_3:66987722-66987741 Msa1303720:three_prime_UTR 25.0%
! TTCTTATTCATCGTTAAATC+TGG - chr8_3:66987938-66987957 Msa1303720:intron 25.0%
! TCTTATTCATCGTTAAATCT+GGG - chr8_3:66987939-66987958 Msa1303720:intron 25.0%
! AATTATAATGTTTGGTTGGT+TGG - chr8_3:66988149-66988168 Msa1303720:intron 25.0%
! AAAACTATGGAGAGTTTAAA+TGG + chr8_3:66988198-66988217 None:intergenic 25.0%
!!! CTAAAATGATAACGATTTTG+AGG + chr8_3:66988257-66988276 None:intergenic 25.0%
!! TGAGTTGAACTATTAATTGA+GGG + chr8_3:66988409-66988428 None:intergenic 25.0%
!!! TTGAGTTGAACTATTAATTG+AGG + chr8_3:66988410-66988429 None:intergenic 25.0%
! AAAAATATTGATCCACGTAT+CGG - chr8_3:66988440-66988459 Msa1303720:intron 25.0%
! GATTTCGACAGAATAATAAT+TGG + chr8_3:66988848-66988867 None:intergenic 25.0%
! ATTATTCTGTCGAAATCATA+AGG - chr8_3:66988851-66988870 Msa1303720:intron 25.0%
! CATTCAAAGAAAGTAACATT+TGG + chr8_3:66989258-66989277 None:intergenic 25.0%
! ACTTTCTTTGAATGATGATA+TGG - chr8_3:66989264-66989283 Msa1303720:intron 25.0%
! CAAATTTCAAGGTAAAACAA+TGG - chr8_3:66989407-66989426 Msa1303720:intron 25.0%
!! TCAATATTTTCTTTCTTCAG+AGG - chr8_3:66989683-66989702 Msa1303720:intron 25.0%
!!! ATTAAGTCTTTTTCAACTGA+CGG - chr8_3:66989718-66989737 Msa1303720:intron 25.0%
! ACCAAAATTTGTAAAGAGAA+TGG - chr8_3:66989750-66989769 Msa1303720:intron 25.0%
!! TCCATTCTCTTTACAAATTT+TGG + chr8_3:66989754-66989773 None:intergenic 25.0%
! AAGCTTTACGAATATCATAT+AGG - chr8_3:66990063-66990082 Msa1303720:CDS 25.0%
! TTTACTATAGACACCATAAT+TGG - chr8_3:66990178-66990197 Msa1303720:intron 25.0%
! TTACTATAGACACCATAATT+GGG - chr8_3:66990179-66990198 Msa1303720:intron 25.0%
! CCATAAGAAAAATCATTTAC+TGG + chr8_3:66990254-66990273 None:intergenic 25.0%
!! CCAGTAAATGATTTTTCTTA+TGG - chr8_3:66990251-66990270 Msa1303720:intron 25.0%
! CTGTAGAGATAGAATAATTT+GGG + chr8_3:66990295-66990314 None:intergenic 25.0%
!! GTTGGCATCTTTTAATAAAA+AGG + chr8_3:66990494-66990513 None:intergenic 25.0%
!!! GAGTTTTATAGTAATCTTTG+TGG - chr8_3:66990831-66990850 Msa1303720:intron 25.0%
! ATATCATAACCATAAGATGT+TGG + chr8_3:66991217-66991236 None:intergenic 25.0%
!!! TGTTTTGGTTTTAGAAGAAT+TGG - chr8_3:66991277-66991296 Msa1303720:CDS 25.0%
!!! ACTTCTAAGATCTAATGATT+TGG - chr8_3:66991320-66991339 Msa1303720:intron 25.0%
! AACATATATGCAGAATTTCT+TGG - chr8_3:66991535-66991554 Msa1303720:CDS 25.0%
! TCAAAAAATACTTGCAAAGA+GGG + chr8_3:66991851-66991870 None:intergenic 25.0%
! ATCAAAAAATACTTGCAAAG+AGG + chr8_3:66991852-66991871 None:intergenic 25.0%
!!! ATTTTGTGTGTCTTATTTCT+TGG - chr8_3:66992216-66992235 Msa1303720:intron 25.0%
!!! TGTCTTATTTCTTGGAATTT+GGG - chr8_3:66992224-66992243 Msa1303720:intron 25.0%
! TACAAACCTAAATTCTTAGA+TGG + chr8_3:66992427-66992446 None:intergenic 25.0%
! ATTATGTGCTTTATGAGAAT+TGG - chr8_3:66992790-66992809 Msa1303720:intron 25.0%
! AAAGTAGAAGTTCATGATTA+AGG + chr8_3:66992835-66992854 None:intergenic 25.0%
!! TTTTATCCAATCGAAAATAG+GGG - chr8_3:66992855-66992874 Msa1303720:intron 25.0%
! TGTAATACTTTGCATTGAAA+GGG - chr8_3:66992882-66992901 Msa1303720:intron 25.0%
! ATGAAAAGGATAATTTACCT+CGG + chr8_3:66993028-66993047 None:intergenic 25.0%
! GATAAGTGTCATATCAATAA+TGG + chr8_3:66993456-66993475 None:intergenic 25.0%
! GATATGACACTTATCTAATT+TGG - chr8_3:66993461-66993480 Msa1303720:intron 25.0%
!! TTTTCAATCTCTCTTTTGTT+GGG + chr8_3:66993530-66993549 None:intergenic 25.0%
!! ATTTTCAATCTCTCTTTTGT+TGG + chr8_3:66993531-66993550 None:intergenic 25.0%
! AAAAGAGAGATTGAAAATCA+AGG - chr8_3:66993533-66993552 Msa1303720:intron 25.0%
! AAATCTGCTTCATTTATAAG+GGG + chr8_3:66993613-66993632 None:intergenic 25.0%
! GAAATCTGCTTCATTTATAA+GGG + chr8_3:66993614-66993633 None:intergenic 25.0%
! TGAAATCTGCTTCATTTATA+AGG + chr8_3:66993615-66993634 None:intergenic 25.0%
! TATTATGCATGTGAGTTAAA+AGG - chr8_3:66993672-66993691 Msa1303720:intron 25.0%
!!! AAGAAAAAAGTGTCTTAGAA+TGG + chr8_3:66993728-66993747 None:intergenic 25.0%
! GGTGAAAATATATATTGAGA+GGG - chr8_3:66993808-66993827 Msa1303720:CDS 25.0%
! GTGAAAATATATATTGAGAG+GGG - chr8_3:66993809-66993828 Msa1303720:CDS 25.0%
! TGTTAAAAGGTTACATCAAA+GGG + chr8_3:66993946-66993965 None:intergenic 25.0%
! TTGTTAAAAGGTTACATCAA+AGG + chr8_3:66993947-66993966 None:intergenic 25.0%
! TCAAATTTGAATGAATCTCA+AGG + chr8_3:66994098-66994117 None:intergenic 25.0%
!!! AGTTTTGACTTTTTGATAAG+TGG - chr8_3:66994122-66994141 Msa1303720:five_prime_UTR 25.0%
! ATTCAATGTTATAGTACTCT+GGG - chr8_3:66994223-66994242 Msa1303720:five_prime_UTR 25.0%
!!! AGAAAGGCTTTGTTTTGTAT+TGG - chr8_3:66987413-66987432 Msa1303720:three_prime_UTR 30.0%
GAAGAAGGATTCAAATTCAA+TGG + chr8_3:66987599-66987618 None:intergenic 30.0%
GTAGCCATTGAAATTGAAAA+TGG + chr8_3:66987729-66987748 None:intergenic 30.0%
AGTGAAAAGATGTTCTGATA+CGG + chr8_3:66987815-66987834 None:intergenic 30.0%
! ATGAATGGATGGTTTTTGTT+TGG + chr8_3:66987883-66987902 None:intergenic 30.0%
TTATTAAAAGCTTGTGGGTT+TGG - chr8_3:66987990-66988009 Msa1303720:exon 30.0%
ACGAGGTATGAAAAAAACTA+TGG + chr8_3:66988211-66988230 None:intergenic 30.0%
CCTTAACGCATTAAGTATAT+GGG + chr8_3:66988589-66988608 None:intergenic 30.0%
ACCTTAACGCATTAAGTATA+TGG + chr8_3:66988590-66988609 None:intergenic 30.0%
GTTCAAAATACCAATGAACA+AGG + chr8_3:66988777-66988796 None:intergenic 30.0%
TAAATCGTATGGAAGTTGTT+AGG + chr8_3:66988969-66988988 None:intergenic 30.0%
TCCATATGCATAACAAATCA+CGG + chr8_3:66989087-66989106 None:intergenic 30.0%
CTGATGAGTAAAATCAACTT+TGG - chr8_3:66989121-66989140 Msa1303720:intron 30.0%
! GCTCATCTAAAGTGAATAAA+GGG + chr8_3:66989162-66989181 None:intergenic 30.0%
CTTGAAATTTGACAATTCCA+AGG + chr8_3:66989398-66989417 None:intergenic 30.0%
CTTGGAATTGTCAAATTTCA+AGG - chr8_3:66989396-66989415 Msa1303720:intron 30.0%
!! AAAAAAGCATTGGTTAATGC+TGG - chr8_3:66989805-66989824 Msa1303720:intron 30.0%
GAGTTAGATAAAACCAAATG+TGG - chr8_3:66989850-66989869 Msa1303720:intron 30.0%
!! ACCAAATGTGGAGTTTTAAT+CGG - chr8_3:66989862-66989881 Msa1303720:intron 30.0%
!! TGACTATTTTGTTTGTGTTG+TGG - chr8_3:66990012-66990031 Msa1303720:CDS 30.0%
! TCCTTTTGCAACAACAAATA+TGG - chr8_3:66990106-66990125 Msa1303720:intron 30.0%
! CCTTTTGCAACAACAAATAT+GGG - chr8_3:66990107-66990126 Msa1303720:intron 30.0%
AAGAACTAATTAAACGAACC+AGG + chr8_3:66990154-66990173 None:intergenic 30.0%
! TGGTTCGTTTAATTAGTTCT+TGG - chr8_3:66990153-66990172 Msa1303720:intron 30.0%
GAAAAATCATTTACTGGACA+TGG + chr8_3:66990248-66990267 None:intergenic 30.0%
!! TGATTTTTCTTATGGATTGC+AGG - chr8_3:66990259-66990278 Msa1303720:intron 30.0%
!! GATTTTTCTTATGGATTGCA+GGG - chr8_3:66990260-66990279 Msa1303720:intron 30.0%
GCTGTAGAGATAGAATAATT+TGG + chr8_3:66990296-66990315 None:intergenic 30.0%
GAATGAAGATAACTAAAAGG+TGG + chr8_3:66990441-66990460 None:intergenic 30.0%
TAAGTATTACAGTATCCCAA+GGG + chr8_3:66990744-66990763 None:intergenic 30.0%
ATAAGTATTACAGTATCCCA+AGG + chr8_3:66990745-66990764 None:intergenic 30.0%
!!! TTTTTTTATCCCTGTACTGT+AGG - chr8_3:66990783-66990802 Msa1303720:intron 30.0%
GACACCACCTAAAATTTATA+AGG - chr8_3:66990966-66990985 Msa1303720:intron 30.0%
!!! ACTGCAATATTTTAGTCTCT+GGG + chr8_3:66991130-66991149 None:intergenic 30.0%
!!! AACTGCAATATTTTAGTCTC+TGG + chr8_3:66991131-66991150 None:intergenic 30.0%
TGTTACTAACCAACATCTTA+TGG - chr8_3:66991205-66991224 Msa1303720:intron 30.0%
ATGATATTACAGAATCGTGA+TGG - chr8_3:66991230-66991249 Msa1303720:intron 30.0%
!!! ACTGTTTTAACACAAGGTTA+GGG + chr8_3:66991366-66991385 None:intergenic 30.0%
!!! AACTGTTTTAACACAAGGTT+AGG + chr8_3:66991367-66991386 None:intergenic 30.0%
!!! GTATCAACTGTTTTAACACA+AGG + chr8_3:66991372-66991391 None:intergenic 30.0%
ATATATGCAGAATTTCTTGG+TGG - chr8_3:66991538-66991557 Msa1303720:CDS 30.0%
TAAAATTTACCATCAGGATG+TGG + chr8_3:66991598-66991617 None:intergenic 30.0%
AAGGTGTAAAATTTACCATC+AGG + chr8_3:66991604-66991623 None:intergenic 30.0%
! TAAGTGTATGTATGTTTTCC+TGG - chr8_3:66992008-66992027 Msa1303720:CDS 30.0%
TTAGAAATGTAAAGGAAGTG+TGG + chr8_3:66992197-66992216 None:intergenic 30.0%
!! GTGTCTTATTTCTTGGAATT+TGG - chr8_3:66992223-66992242 Msa1303720:intron 30.0%
ACATCTATAATGCAGACTAA+TGG - chr8_3:66992313-66992332 Msa1303720:intron 30.0%
CATCTATAATGCAGACTAAT+GGG - chr8_3:66992314-66992333 Msa1303720:intron 30.0%
ATCTATAATGCAGACTAATG+GGG - chr8_3:66992315-66992334 Msa1303720:intron 30.0%
CTGATACCATCTAAGAATTT+AGG - chr8_3:66992418-66992437 Msa1303720:intron 30.0%
! GAATTTAGGTTTGTAAAGTG+AGG - chr8_3:66992432-66992451 Msa1303720:intron 30.0%
TGTTATTCCAAAAAACCCAT+TGG + chr8_3:66992557-66992576 None:intergenic 30.0%
TTATAAGGTGAGAATTGTGT+AGG - chr8_3:66992638-66992657 Msa1303720:intron 30.0%
GTGTAATACTTTGCATTGAA+AGG - chr8_3:66992881-66992900 Msa1303720:intron 30.0%
TGAAAAGGATAATTTACCTC+GGG + chr8_3:66993027-66993046 None:intergenic 30.0%
TTCGTCTTTCCTTGATATAT+AGG - chr8_3:66993322-66993341 Msa1303720:intron 30.0%
AAATCCAAATGAATTGGACA+AGG + chr8_3:66993562-66993581 None:intergenic 30.0%
TTGTCCAATTCATTTGGATT+TGG - chr8_3:66993561-66993580 Msa1303720:intron 30.0%
TGTCCAATTCATTTGGATTT+GGG - chr8_3:66993562-66993581 Msa1303720:intron 30.0%
! TATATATTTTCACCCAACCA+AGG + chr8_3:66993802-66993821 None:intergenic 30.0%
GGGTGAAAATATATATTGAG+AGG - chr8_3:66993807-66993826 Msa1303720:CDS 30.0%
TTAAAAGGTTACATCAAAGG+GGG + chr8_3:66993944-66993963 None:intergenic 30.0%
GTTAAAAGGTTACATCAAAG+GGG + chr8_3:66993945-66993964 None:intergenic 30.0%
AAGTGGCTGTTATTGTTAAA+AGG + chr8_3:66993959-66993978 None:intergenic 30.0%
! TTTTAACAATAACAGCCACT+TGG - chr8_3:66993958-66993977 Msa1303720:five_prime_UTR 30.0%
CATTCAATGTTATAGTACTC+TGG - chr8_3:66994222-66994241 Msa1303720:five_prime_UTR 30.0%
GAAAAATAAGAGAGCAAAGG+AGG - chr8_3:66987363-66987382 Msa1303720:three_prime_UTR 35.0%
CAAATTCAATGGATCTCTTC+TGG + chr8_3:66987588-66987607 None:intergenic 35.0%
TGAAAATGGAGAAAAGATCG+AGG + chr8_3:66987715-66987734 None:intergenic 35.0%
CAAAAACCATCCATTCATTC+TGG - chr8_3:66987885-66987904 Msa1303720:intron 35.0%
AGATTACCAGAATGAATGGA+TGG + chr8_3:66987894-66987913 None:intergenic 35.0%
GTTGAGATTACCAGAATGAA+TGG + chr8_3:66987898-66987917 None:intergenic 35.0%
!! TTTGGTTTGGATCTTTGTCT+TGG - chr8_3:66988013-66988032 Msa1303720:CDS 35.0%
!! TTGGTTTGGATCTTTGTCTT+GGG - chr8_3:66988014-66988033 Msa1303720:CDS 35.0%
!!! TGGGTTGGTTTTACTTTAAG+TGG - chr8_3:66988033-66988052 Msa1303720:CDS 35.0%
!!! GGGTTGGTTTTACTTTAAGT+GGG - chr8_3:66988034-66988053 Msa1303720:CDS 35.0%
!!! GGTTGGTTTTACTTTAAGTG+GGG - chr8_3:66988035-66988054 Msa1303720:CDS 35.0%
CTCGTACATATCGTATGTAT+GGG - chr8_3:66988226-66988245 Msa1303720:CDS 35.0%
CAGCACATAAAAGTGACAAT+TGG + chr8_3:66988310-66988329 None:intergenic 35.0%
! CCAACATTTTATCCATTCAG+AGG + chr8_3:66988550-66988569 None:intergenic 35.0%
CCTCTGAATGGATAAAATGT+TGG - chr8_3:66988547-66988566 Msa1303720:intron 35.0%
CCCATATACTTAATGCGTTA+AGG - chr8_3:66988586-66988605 Msa1303720:intron 35.0%
!! TAATGCGTTAAGGTTTTGTG+TGG - chr8_3:66988596-66988615 Msa1303720:CDS 35.0%
CAAAATACCAATGAACAAGG+AGG + chr8_3:66988774-66988793 None:intergenic 35.0%
TAATAATTGGATCATCTCCG+AGG + chr8_3:66988835-66988854 None:intergenic 35.0%
AAGCACGTATATGCCAAATA+GGG + chr8_3:66988930-66988949 None:intergenic 35.0%
TAAGCACGTATATGCCAAAT+AGG + chr8_3:66988931-66988950 None:intergenic 35.0%
TATTTGGCATATACGTGCTT+AGG - chr8_3:66988930-66988949 Msa1303720:intron 35.0%
!! TCCGTGATTTGTTATGCATA+TGG - chr8_3:66989083-66989102 Msa1303720:intron 35.0%
! GGCTCATCTAAAGTGAATAA+AGG + chr8_3:66989163-66989182 None:intergenic 35.0%
TTGTCATATGGAAGCAGATT+TGG + chr8_3:66989184-66989203 None:intergenic 35.0%
ATGATATGGTTTGAACTCCA+AGG - chr8_3:66989278-66989297 Msa1303720:intron 35.0%
ATTTGACAATTCCAAGGCAT+AGG + chr8_3:66989392-66989411 None:intergenic 35.0%
TAAAACAATGGCAGTAGCTT+TGG - chr8_3:66989419-66989438 Msa1303720:intron 35.0%
! TTTCTTTGTTGTGACCTCTT+GGG + chr8_3:66989451-66989470 None:intergenic 35.0%
!! TTTTCTTTGTTGTGACCTCT+TGG + chr8_3:66989452-66989471 None:intergenic 35.0%
AACTTCCTACAAAGCAAAGA+CGG - chr8_3:66989472-66989491 Msa1303720:intron 35.0%
! AATTTACTCAATGGTGTCAG+TGG - chr8_3:66989558-66989577 Msa1303720:intron 35.0%
TGGAATTACTGAAGATGTGA+TGG - chr8_3:66989825-66989844 Msa1303720:intron 35.0%
!! GCAAGTTCTGAAAGAAGTTA+TGG + chr8_3:66989936-66989955 None:intergenic 35.0%
TGATATTCGTAAAGCTTCGA+TGG + chr8_3:66990060-66990079 None:intergenic 35.0%
GTTGCAAAAGGAATACAGAA+AGG + chr8_3:66990098-66990117 None:intergenic 35.0%
!! CCCATATTTGTTGTTGCAAA+AGG + chr8_3:66990110-66990129 None:intergenic 35.0%
GACTCTGCTATTATTCCAAT+TGG - chr8_3:66990567-66990586 Msa1303720:intron 35.0%
!! AATCCAATGATATTTGGTGC+AGG - chr8_3:66990652-66990671 Msa1303720:intron 35.0%
AAACCTGCACCAAATATCAT+TGG + chr8_3:66990658-66990677 None:intergenic 35.0%
!! AATGATATTTGGTGCAGGTT+TGG - chr8_3:66990657-66990676 Msa1303720:intron 35.0%
!! ATGATATTTGGTGCAGGTTT+GGG - chr8_3:66990658-66990677 Msa1303720:intron 35.0%
ATGTGTCAGCTTAAGGAATT+GGG + chr8_3:66991033-66991052 None:intergenic 35.0%
AATGTGTCAGCTTAAGGAAT+TGG + chr8_3:66991034-66991053 None:intergenic 35.0%
!! CAACGATTTTGACGAAGTAA+TGG - chr8_3:66991081-66991100 Msa1303720:intron 35.0%
!!! ATATTTTAGTCTCTGGGACT+TGG + chr8_3:66991124-66991143 None:intergenic 35.0%
!! AATCGTGATGGATTTGTCAT+GGG - chr8_3:66991242-66991261 Msa1303720:intron 35.0%
GGAAAAAATAACCCAACACA+AGG + chr8_3:66991405-66991424 None:intergenic 35.0%
TTTGTTACATGTGTACTTCC+TGG - chr8_3:66991475-66991494 Msa1303720:CDS 35.0%
GTAAAAAATTGGATGTCACC+AGG + chr8_3:66991496-66991515 None:intergenic 35.0%
TTCTCTGCGAGGTAAAAAAT+TGG + chr8_3:66991507-66991526 None:intergenic 35.0%
ATTGTACAGACATCTTCATG+AGG - chr8_3:66991681-66991700 Msa1303720:intron 35.0%
CTTTGATCATGCAAATTCAG+AGG + chr8_3:66991882-66991901 None:intergenic 35.0%
ACTTTCGCATTAAAATGACC+AGG + chr8_3:66992029-66992048 None:intergenic 35.0%
!! TGGTCATTTTAATGCGAAAG+TGG - chr8_3:66992028-66992047 Msa1303720:CDS 35.0%
! AAATGTAAAGGAAGTGTGGT+AGG + chr8_3:66992193-66992212 None:intergenic 35.0%
!! CTAGCTTTATCCCATAAAAC+CGG - chr8_3:66992255-66992274 Msa1303720:intron 35.0%
TAATCCTAAAGCACGAGAAA+GGG + chr8_3:66992292-66992311 None:intergenic 35.0%
TCTATAATGCAGACTAATGG+GGG - chr8_3:66992316-66992335 Msa1303720:intron 35.0%
TCTGCCCAATAACAAGTTTA+TGG - chr8_3:66992389-66992408 Msa1303720:intron 35.0%
!! CCTGCCATAAACTTGTTATT+GGG + chr8_3:66992396-66992415 None:intergenic 35.0%
ATCAACTAGAAATACGGTCT+AGG + chr8_3:66992482-66992501 None:intergenic 35.0%
!! ACCGTATTTCTAGTTGATGA+GGG - chr8_3:66992484-66992503 Msa1303720:intron 35.0%
TCCCTCATCAACTAGAAATA+CGG + chr8_3:66992488-66992507 None:intergenic 35.0%
AAAATCTAGTGTGGACCAAT+GGG - chr8_3:66992539-66992558 Msa1303720:intron 35.0%
!!! GGGTTTTTTGGAATAACAGT+AGG - chr8_3:66992559-66992578 Msa1303720:intron 35.0%
ACAATTCTCACCTTATAAGC+TGG + chr8_3:66992636-66992655 None:intergenic 35.0%
AGACTTAGGTGGTACTTATA+AGG + chr8_3:66992664-66992683 None:intergenic 35.0%
AACTAGAGATAAGACTTAGG+TGG + chr8_3:66992675-66992694 None:intergenic 35.0%
AGCAACTAGAGATAAGACTT+AGG + chr8_3:66992678-66992697 None:intergenic 35.0%
TATTCCTTAAGATCACCAGA+TGG + chr8_3:66992973-66992992 None:intergenic 35.0%
CAAAACAATGAATCAGAGCT+TGG + chr8_3:66992996-66993015 None:intergenic 35.0%
!! CAAGCTCTGATTCATTGTTT+TGG - chr8_3:66992994-66993013 Msa1303720:intron 35.0%
GAAAAGGATAATTTACCTCG+GGG + chr8_3:66993026-66993045 None:intergenic 35.0%
TCCTTGATATATAGGCAATC+AGG - chr8_3:66993330-66993349 Msa1303720:intron 35.0%
TCCTGATTGCCTATATATCA+AGG + chr8_3:66993334-66993353 None:intergenic 35.0%
ATATATAGGCAATCAGGACA+GGG - chr8_3:66993336-66993355 Msa1303720:intron 35.0%
!! GGGTTTTCAAGGTTTATGTT+AGG + chr8_3:66993371-66993390 None:intergenic 35.0%
AACATACCACGTCTTTATCT+GGG + chr8_3:66993391-66993410 None:intergenic 35.0%
TAACATACCACGTCTTTATC+TGG + chr8_3:66993392-66993411 None:intergenic 35.0%
GTCCAATTCATTTGGATTTG+GGG - chr8_3:66993563-66993582 Msa1303720:intron 35.0%
TCCAATTCATTTGGATTTGG+GGG - chr8_3:66993564-66993583 Msa1303720:intron 35.0%
TATGCATGTGAGTTAAAAGG+AGG - chr8_3:66993675-66993694 Msa1303720:intron 35.0%
TAATATGCAACACATTGCCT+TGG + chr8_3:66993771-66993790 None:intergenic 35.0%
TGCATATTAACTCTACTCCT+TGG - chr8_3:66993782-66993801 Msa1303720:CDS 35.0%
TATTAACTCTACTCCTTGGT+TGG - chr8_3:66993786-66993805 Msa1303720:CDS 35.0%
ATTAACTCTACTCCTTGGTT+GGG - chr8_3:66993787-66993806 Msa1303720:CDS 35.0%
ATGCACTTTCTGATTCTACA+AGG + chr8_3:66993844-66993863 None:intergenic 35.0%
! TCAGAAAGTGCATAGATATG+TGG - chr8_3:66993851-66993870 Msa1303720:CDS 35.0%
ATCCTCTATCTTAGCATGAA+TGG - chr8_3:66993900-66993919 Msa1303720:five_prime_UTR 35.0%
TTAGCATGAATGGCTGAAAT+AGG - chr8_3:66993910-66993929 Msa1303720:five_prime_UTR 35.0%
TAAAAGGTTACATCAAAGGG+GGG + chr8_3:66993943-66993962 None:intergenic 35.0%
TTTCATATCAGTAGTACACC+TGG - chr8_3:66994021-66994040 Msa1303720:five_prime_UTR 35.0%
GAAGAAGAGTGAGAAGAAGA+AGG + chr8_3:66987614-66987633 None:intergenic 40.0%
GAAGAAGAGGAAGATGAAGT+TGG + chr8_3:66987646-66987665 None:intergenic 40.0%
AGCAGAAGAAGAAGAAGAAG+AGG + chr8_3:66987659-66987678 None:intergenic 40.0%
!! TCGAAAAAGAGCGTTGTTGT+TGG + chr8_3:66987847-66987866 None:intergenic 40.0%
! AAAAGCTTGTGGGTTTGGTT+TGG - chr8_3:66987995-66988014 Msa1303720:exon 40.0%
TTTGGATCTTTGTCTTGGGT+TGG - chr8_3:66988018-66988037 Msa1303720:CDS 40.0%
! GGTTTTACTTTAAGTGGGGT+TGG - chr8_3:66988039-66988058 Msa1303720:CDS 40.0%
ATAGTAGAGTAGAGTAGAGC+AGG + chr8_3:66988103-66988122 None:intergenic 40.0%
GGAGAGTTTAAATGGCACAT+GGG + chr8_3:66988190-66988209 None:intergenic 40.0%
TGGAGAGTTTAAATGGCACA+TGG + chr8_3:66988191-66988210 None:intergenic 40.0%
CCATACATACGATATGTACG+AGG + chr8_3:66988228-66988247 None:intergenic 40.0%
CCTCGTACATATCGTATGTA+TGG - chr8_3:66988225-66988244 Msa1303720:CDS 40.0%
GTGCATGTGATGAACAATCT+TGG + chr8_3:66988345-66988364 None:intergenic 40.0%
TGTAGAAGCTGCATCATAAG+TGG - chr8_3:66988744-66988763 Msa1303720:intron 40.0%
AGCATTGTACTGGGATTACA+GGG + chr8_3:66988812-66988831 None:intergenic 40.0%
AGCACGTATATGCCAAATAG+GGG + chr8_3:66988929-66988948 None:intergenic 40.0%
TATGGAAGTTGTTAGGTACC+GGG + chr8_3:66988962-66988981 None:intergenic 40.0%
GTATGGAAGTTGTTAGGTAC+CGG + chr8_3:66988963-66988982 None:intergenic 40.0%
CACTAGAGAGCTAAATCGTA+TGG + chr8_3:66988980-66988999 None:intergenic 40.0%
ACTTCCTACAAAGCAAAGAC+GGG - chr8_3:66989473-66989492 Msa1303720:intron 40.0%
ATATCTGGATCATGACCAAG+TGG + chr8_3:66989528-66989547 None:intergenic 40.0%
TTCTTTCTTCAGAGGATTGC+TGG - chr8_3:66989691-66989710 Msa1303720:intron 40.0%
!!! AGTCTTTTTCAACTGACGGA+TGG - chr8_3:66989722-66989741 Msa1303720:intron 40.0%
!!! GTCTTTTTCAACTGACGGAT+GGG - chr8_3:66989723-66989742 Msa1303720:intron 40.0%
TATGCTCTATCTGCTAACAG+CGG - chr8_3:66989780-66989799 Msa1303720:intron 40.0%
! AACAGCGGGAAAAAAAGCAT+TGG - chr8_3:66989795-66989814 Msa1303720:intron 40.0%
GCCGATTAAAACTCCACATT+TGG + chr8_3:66989866-66989885 None:intergenic 40.0%
!! GTTTTAATCGGCTCAGCATT+AGG - chr8_3:66989874-66989893 Msa1303720:intron 40.0%
GTCACACAAATCAATGCGAT+AGG + chr8_3:66989996-66990015 None:intergenic 40.0%
! GTTTGTGTTGTGGATTGAAC+AGG - chr8_3:66990022-66990041 Msa1303720:CDS 40.0%
ACACCATAATTGGGTGTCTT+GGG - chr8_3:66990188-66990207 Msa1303720:intron 40.0%
! TTTCTTATGGATTGCAGGGA+TGG - chr8_3:66990264-66990283 Msa1303720:intron 40.0%
TTCACCTCTGATGATATGGT+TGG + chr8_3:66990354-66990373 None:intergenic 40.0%
TGTAGGATGTGATGCTTTGT+GGG - chr8_3:66990538-66990557 Msa1303720:intron 40.0%
AGAAGGATCGGTATTCCTTT+GGG + chr8_3:66990710-66990729 None:intergenic 40.0%
TAGAAGGATCGGTATTCCTT+TGG + chr8_3:66990711-66990730 None:intergenic 40.0%
CTTACTACACCTACAGTACA+GGG + chr8_3:66990795-66990814 None:intergenic 40.0%
TCTTACTACACCTACAGTAC+AGG + chr8_3:66990796-66990815 None:intergenic 40.0%
! AACCAGAGTCTTTTTCCACT+GGG + chr8_3:66990869-66990888 None:intergenic 40.0%
!!! AGGTGGTGTCTTTGTTTTCT+AGG + chr8_3:66990956-66990975 None:intergenic 40.0%
CGATACAATGTGTCAGCTTA+AGG + chr8_3:66991040-66991059 None:intergenic 40.0%
TGGTTAGTAACACAAGTGCA+GGG + chr8_3:66991197-66991216 None:intergenic 40.0%
TTGGTTAGTAACACAAGTGC+AGG + chr8_3:66991198-66991217 None:intergenic 40.0%
!! GAATCGTGATGGATTTGTCA+TGG - chr8_3:66991241-66991260 Msa1303720:intron 40.0%
!! ATCGTGATGGATTTGTCATG+GGG - chr8_3:66991243-66991262 Msa1303720:CDS 40.0%
AGAAGAATTGGAGCATGCTA+AGG - chr8_3:66991289-66991308 Msa1303720:CDS 40.0%
ACACATGTTCTACCTTGTGT+TGG - chr8_3:66991390-66991409 Msa1303720:intron 40.0%
CACATGTTCTACCTTGTGTT+GGG - chr8_3:66991391-66991410 Msa1303720:intron 40.0%
!!! TTTTTTACCTCGCAGAGAAG+AGG - chr8_3:66991508-66991527 Msa1303720:CDS 40.0%
ACATCTTCATGAGGACTATC+TGG - chr8_3:66991690-66991709 Msa1303720:intron 40.0%
CATCTTCATGAGGACTATCT+GGG - chr8_3:66991691-66991710 Msa1303720:intron 40.0%
TTCTTGGAATTTGGGCTTAG+AGG - chr8_3:66992232-66992251 Msa1303720:intron 40.0%
CTAATCCTAAAGCACGAGAA+AGG + chr8_3:66992293-66992312 None:intergenic 40.0%
CCCAATAACAAGTTTATGGC+AGG - chr8_3:66992393-66992412 Msa1303720:intron 40.0%
!! GCCTGCCATAAACTTGTTAT+TGG + chr8_3:66992397-66992416 None:intergenic 40.0%
AGGTGGTGCTTATATGGTTT+GGG + chr8_3:66992462-66992481 None:intergenic 40.0%
TAGGTGGTGCTTATATGGTT+TGG + chr8_3:66992463-66992482 None:intergenic 40.0%
AACTAGAAATACGGTCTAGG+TGG + chr8_3:66992479-66992498 None:intergenic 40.0%
!! GACCGTATTTCTAGTTGATG+AGG - chr8_3:66992483-66992502 Msa1303720:intron 40.0%
CAAAACCTCACTCATGCTTT+CGG - chr8_3:66992512-66992531 Msa1303720:intron 40.0%
TTCGGACTGAAAATCTAGTG+TGG - chr8_3:66992530-66992549 Msa1303720:intron 40.0%
GAAAATCTAGTGTGGACCAA+TGG - chr8_3:66992538-66992557 Msa1303720:intron 40.0%
!! TGGTCTTGTGAGATCGAATT+AGG + chr8_3:66992616-66992635 None:intergenic 40.0%
TCTCACAAGACCAGCTTATA+AGG - chr8_3:66992623-66992642 Msa1303720:intron 40.0%
! AGTCTTATCTCTAGTTGCTG+TGG - chr8_3:66992679-66992698 Msa1303720:intron 40.0%
GTCTTATCTCTAGTTGCTGT+GGG - chr8_3:66992680-66992699 Msa1303720:intron 40.0%
AGAATTGGTACTTACATCCG+AGG - chr8_3:66992805-66992824 Msa1303720:intron 40.0%
!! TTCATGATTAAGGAGCACCT+CGG + chr8_3:66992825-66992844 None:intergenic 40.0%
! ACTTTGCATTGAAAGGGCAT+TGG - chr8_3:66992888-66992907 Msa1303720:intron 40.0%
AACACCATCTGGTGATCTTA+AGG - chr8_3:66992966-66992985 Msa1303720:intron 40.0%
!!! TTGTTTTGGTAAAAACCCCG+AGG - chr8_3:66993008-66993027 Msa1303720:intron 40.0%
TCTATGATCGGTCATCTACT+AGG - chr8_3:66993189-66993208 Msa1303720:intron 40.0%
GATATATAGGCAATCAGGAC+AGG - chr8_3:66993335-66993354 Msa1303720:intron 40.0%
! CGTCTTTATCTGGGTTTTCA+AGG + chr8_3:66993382-66993401 None:intergenic 40.0%
TGAAAACCCAGATAAAGACG+TGG - chr8_3:66993382-66993401 Msa1303720:intron 40.0%
CAAAATGTCAATGTTGCAGC+AGG + chr8_3:66993415-66993434 None:intergenic 40.0%
! CAGGATACTAAAGTGCTTGT+AGG - chr8_3:66993504-66993523 Msa1303720:intron 40.0%
TCCCCCAAATCCAAATGAAT+TGG + chr8_3:66993568-66993587 None:intergenic 40.0%
AGCCATTCATGCTAAGATAG+AGG + chr8_3:66993905-66993924 None:intergenic 40.0%
AAAAGGTTACATCAAAGGGG+GGG + chr8_3:66993942-66993961 None:intergenic 40.0%
AACAATAACAGCCACTTGGT+TGG - chr8_3:66993962-66993981 Msa1303720:five_prime_UTR 40.0%
GTATATGATAGCCAACCAAG+TGG + chr8_3:66993976-66993995 None:intergenic 40.0%
! TTATTTTCCAATGTGCAGCC+AGG + chr8_3:66994042-66994061 None:intergenic 40.0%
CGTGTAGAGTGATGAAGAAG+TGG + chr8_3:66987751-66987770 None:intergenic 45.0%
CTTCTTCATCACTCTACACG+TGG - chr8_3:66987751-66987770 Msa1303720:three_prime_UTR 45.0%
!! CTTGTGGGTTTGGTTTGGTT+TGG - chr8_3:66988000-66988019 Msa1303720:CDS 45.0%
! TATTGATCCACGTATCGGCA+TGG - chr8_3:66988445-66988464 Msa1303720:intron 45.0%
! TCTCGGTCTCTGTTTTCTCA+GGG - chr8_3:66988473-66988492 Msa1303720:intron 45.0%
CAATCTTCTATGCGTGTGAG+TGG - chr8_3:66988508-66988527 Msa1303720:intron 45.0%
! TGGTTTGCCTCCTTGTTCAT+TGG - chr8_3:66988764-66988783 Msa1303720:intron 45.0%
! GAGCATTGTACTGGGATTAC+AGG + chr8_3:66988813-66988832 None:intergenic 45.0%
AATCCCAGTACAATGCTCCT+CGG - chr8_3:66988815-66988834 Msa1303720:intron 45.0%
TGCCAAATAGGGGAGTTAGA+GGG + chr8_3:66988919-66988938 None:intergenic 45.0%
ATGCCAAATAGGGGAGTTAG+AGG + chr8_3:66988920-66988939 None:intergenic 45.0%
! ACTCCAAGGTTGTGTTGATG+TGG - chr8_3:66989292-66989311 Msa1303720:intron 45.0%
CTTCCACATCAACACAACCT+TGG + chr8_3:66989298-66989317 None:intergenic 45.0%
ACTACCCGTCTTTGCTTTGT+AGG + chr8_3:66989480-66989499 None:intergenic 45.0%
ATGCTCTATCTGCTAACAGC+GGG - chr8_3:66989781-66989800 Msa1303720:intron 45.0%
! TTAATCGGCTCAGCATTAGG+TGG - chr8_3:66989877-66989896 Msa1303720:intron 45.0%
GACACCATAATTGGGTGTCT+TGG - chr8_3:66990187-66990206 Msa1303720:intron 45.0%
CACCATAATTGGGTGTCTTG+GGG - chr8_3:66990189-66990208 Msa1303720:intron 45.0%
AACCCCAAGACACCCAATTA+TGG + chr8_3:66990194-66990213 None:intergenic 45.0%
! TTATGGATTGCAGGGATGGA+TGG - chr8_3:66990268-66990287 Msa1303720:intron 45.0%
! TATGGATTGCAGGGATGGAT+GGG - chr8_3:66990269-66990288 Msa1303720:intron 45.0%
CAGCTTCACCTCTGATGATA+TGG + chr8_3:66990358-66990377 None:intergenic 45.0%
CTGTAGGATGTGATGCTTTG+TGG - chr8_3:66990537-66990556 Msa1303720:intron 45.0%
GTAGGATGTGATGCTTTGTG+GGG - chr8_3:66990539-66990558 Msa1303720:intron 45.0%
TAGGATGTGATGCTTTGTGG+GGG - chr8_3:66990540-66990559 Msa1303720:intron 45.0%
!! ATATTTGGTGCAGGTTTGGG+AGG - chr8_3:66990661-66990680 Msa1303720:intron 45.0%
!! GCGTGATGCTTTAGAAGGAT+CGG + chr8_3:66990722-66990741 None:intergenic 45.0%
!! TTCTAAAGCATCACGCCCTT+GGG - chr8_3:66990726-66990745 Msa1303720:intron 45.0%
! AGAGTCTTTTTCCACTGGGT+CGG + chr8_3:66990865-66990884 None:intergenic 45.0%
! CAACCAGAGTCTTTTTCCAC+TGG + chr8_3:66990870-66990889 None:intergenic 45.0%
!! TCGTGATGGATTTGTCATGG+GGG - chr8_3:66991244-66991263 Msa1303720:CDS 45.0%
ATGGATTTGTCATGGGGGAA+GGG - chr8_3:66991249-66991268 Msa1303720:CDS 45.0%
AAGAGGGAAGCTGCAAAGAA+GGG + chr8_3:66991835-66991854 None:intergenic 45.0%
AAAGAGGGAAGCTGCAAAGA+AGG + chr8_3:66991836-66991855 None:intergenic 45.0%
TGACCATCGTGTCTATCTTC+TGG - chr8_3:66991964-66991983 Msa1303720:intron 45.0%
CTACCAGAAGATAGACACGA+TGG + chr8_3:66991970-66991989 None:intergenic 45.0%
CATCGTGTCTATCTTCTGGT+AGG - chr8_3:66991968-66991987 Msa1303720:intron 45.0%
AACAGGATGGCATGAAGTGT+TGG + chr8_3:66992098-66992117 None:intergenic 45.0%
!! TATCCCATAAAACCGGCTTG+TGG - chr8_3:66992262-66992281 Msa1303720:intron 45.0%
!! ATCCCATAAAACCGGCTTGT+GGG - chr8_3:66992263-66992282 Msa1303720:intron 45.0%
ATGGGGGTTGTGGAATAACA+TGG - chr8_3:66992332-66992351 Msa1303720:intron 45.0%
ACATGGAGCGCATATGAATG+TGG - chr8_3:66992349-66992368 Msa1303720:intron 45.0%
CATGGAGCGCATATGAATGT+GGG - chr8_3:66992350-66992369 Msa1303720:intron 45.0%
!!! GTGTGGACCAATGGGTTTTT+TGG - chr8_3:66992547-66992566 Msa1303720:intron 45.0%
!! AAGGGTTGGTCATTTGGACT+TGG - chr8_3:66992727-66992746 Msa1303720:intron 45.0%
ATCCAATCGAAAATAGGGGC+TGG - chr8_3:66992859-66992878 Msa1303720:intron 45.0%
CATGCTACATCAACACCATC+TGG - chr8_3:66992955-66992974 Msa1303720:intron 45.0%
AGAAGCTGTAGCAACAGTAC+AGG - chr8_3:66993227-66993246 Msa1303720:intron 45.0%
GCTGCCTTGTCCAATTCATT+TGG - chr8_3:66993555-66993574 Msa1303720:intron 45.0%
! CTTGGTACTTGGTAACTGTG+AGG + chr8_3:66993753-66993772 None:intergenic 45.0%
CTCACAGTTACCAAGTACCA+AGG - chr8_3:66993751-66993770 Msa1303720:CDS 45.0%
CAACACATTGCCTTGGTACT+TGG + chr8_3:66993764-66993783 None:intergenic 45.0%
GCATAGATATGTGGTGCTTG+TGG - chr8_3:66993860-66993879 Msa1303720:exon 45.0%
TAGATATGTGGTGCTTGTGG+TGG - chr8_3:66993863-66993882 Msa1303720:exon 45.0%
AGATATGTGGTGCTTGTGGT+GGG - chr8_3:66993864-66993883 Msa1303720:exon 45.0%
!!! TTCTTTTATTTTTTATTTTT+TGG - chr8_3:66990594-66990613 Msa1303720:intron 5.0%
GAGAGTGAGACAGAGAGAGA+TGG + chr8_3:66987533-66987552 None:intergenic 50.0%
CACGTGACTGACATGCAAGA+TGG + chr8_3:66987783-66987802 None:intergenic 50.0%
! GTATCGGCATGGCAAACTCT+CGG - chr8_3:66988456-66988475 Msa1303720:intron 50.0%
! CTCTCGGTCTCTGTTTTCTC+AGG - chr8_3:66988472-66988491 Msa1303720:intron 50.0%
! CTCGGTCTCTGTTTTCTCAG+GGG - chr8_3:66988474-66988493 Msa1303720:intron 50.0%
! TCCATTCAGAGGTGCAGTGT+GGG + chr8_3:66988539-66988558 None:intergenic 50.0%
! ATCCATTCAGAGGTGCAGTG+TGG + chr8_3:66988540-66988559 None:intergenic 50.0%
TGTGACGTCTCCTTCTCTTG+TGG - chr8_3:66988622-66988641 Msa1303720:CDS 50.0%
! ATTGGCCTGTTGTTGCTTCC+TGG - chr8_3:66988654-66988673 Msa1303720:CDS 50.0%
ATGCTCCAGGAAGCAACAAC+AGG + chr8_3:66988662-66988681 None:intergenic 50.0%
! TTGTTGCTTCCTGGAGCATG+CGG - chr8_3:66988663-66988682 Msa1303720:CDS 50.0%
!! TCTCCGAGGAGCATTGTACT+GGG + chr8_3:66988821-66988840 None:intergenic 50.0%
!! ATCTCCGAGGAGCATTGTAC+TGG + chr8_3:66988822-66988841 None:intergenic 50.0%
TCCCCTCTAACTCCCCTATT+TGG - chr8_3:66988914-66988933 Msa1303720:intron 50.0%
GCCAAATAGGGGAGTTAGAG+GGG + chr8_3:66988918-66988937 None:intergenic 50.0%
TACGTGCTTAGGCTAATGCC+CGG - chr8_3:66988941-66988960 Msa1303720:intron 50.0%
! TTGTGTGCTGACCTATGCCT+TGG - chr8_3:66989378-66989397 Msa1303720:intron 50.0%
! TTTGTTGTGACCTCTTGGGC+AGG + chr8_3:66989447-66989466 None:intergenic 50.0%
CAAAGACGGGTAGTTGTGAC+AGG - chr8_3:66989486-66989505 Msa1303720:intron 50.0%
TTGGGTGTGGTTACACCACT+TGG - chr8_3:66989510-66989529 Msa1303720:intron 50.0%
CTCAGCATTAGGTGGCTTCA+AGG - chr8_3:66989885-66989904 Msa1303720:intron 50.0%
AACCAGGTCCATTGCAAGCA+TGG + chr8_3:66990138-66990157 None:intergenic 50.0%
GCAGCCAACCATATCATCAG+AGG - chr8_3:66990347-66990366 Msa1303720:CDS 50.0%
!! TATTCCTTTGGGAGAGTGCC+CGG + chr8_3:66990699-66990718 None:intergenic 50.0%
! CAAGGGCGTGATGCTTTAGA+AGG + chr8_3:66990727-66990746 None:intergenic 50.0%
!! CTTCTAAAGCATCACGCCCT+TGG - chr8_3:66990725-66990744 Msa1303720:intron 50.0%
! GAGTCTTTTTCCACTGGGTC+GGG + chr8_3:66990864-66990883 None:intergenic 50.0%
GACCCAGTGGAAAAAGACTC+TGG - chr8_3:66990864-66990883 Msa1303720:intron 50.0%
! GATGGATTTGTCATGGGGGA+AGG - chr8_3:66991248-66991267 Msa1303720:CDS 50.0%
TGGATTTGTCATGGGGGAAG+GGG - chr8_3:66991250-66991269 Msa1303720:CDS 50.0%
AGTCACGTGATATGCATCGC+AGG + chr8_3:66991572-66991591 None:intergenic 50.0%
AGAGGGAAGCTGCAAAGAAG+GGG + chr8_3:66991834-66991853 None:intergenic 50.0%
!! GTCCCACAAGCCGGTTTTAT+GGG + chr8_3:66992268-66992287 None:intergenic 50.0%
!! TGTCCCACAAGCCGGTTTTA+TGG + chr8_3:66992269-66992288 None:intergenic 50.0%
GACACCCTTTCTCGTGCTTT+AGG - chr8_3:66992285-66992304 Msa1303720:intron 50.0%
ATGCAGACTAATGGGGGTTG+TGG - chr8_3:66992322-66992341 Msa1303720:intron 50.0%
CGGTCTAGGTGGTGCTTATA+TGG + chr8_3:66992468-66992487 None:intergenic 50.0%
! TCAGTCCGAAAGCATGAGTG+AGG + chr8_3:66992520-66992539 None:intergenic 50.0%
AACACATCCCCTCGTGCTAA+GGG - chr8_3:66992709-66992728 Msa1303720:intron 50.0%
ATGACCAACCCTTAGCACGA+GGG + chr8_3:66992720-66992739 None:intergenic 50.0%
AATGACCAACCCTTAGCACG+AGG + chr8_3:66992721-66992740 None:intergenic 50.0%
!! CGTGCTAAGGGTTGGTCATT+TGG - chr8_3:66992721-66992740 Msa1303720:intron 50.0%
! CACCAGCCCCTATTTTCGAT+TGG + chr8_3:66992864-66992883 None:intergenic 50.0%
!! TGAAAGGGCATTGGTCCAGT+CGG - chr8_3:66992897-66992916 Msa1303720:intron 50.0%
!!! CCTCTTTTGAAACTCCCGAC+TGG + chr8_3:66992915-66992934 None:intergenic 50.0%
CCAGTCGGGAGTTTCAAAAG+AGG - chr8_3:66992912-66992931 Msa1303720:intron 50.0%
GGTCATCTACTAGGTGCATC+CGG - chr8_3:66993198-66993217 Msa1303720:intron 50.0%
TGCTACAGCTTCTACACCAC+CGG + chr8_3:66993220-66993239 None:intergenic 50.0%
TATAGGCAATCAGGACAGGG+TGG - chr8_3:66993339-66993358 Msa1303720:intron 50.0%
ATAGGCAATCAGGACAGGGT+GGG - chr8_3:66993340-66993359 Msa1303720:intron 50.0%
TAGTACACCTGGCTGCACAT+TGG - chr8_3:66994032-66994051 Msa1303720:five_prime_UTR 50.0%
GAGTTTGCCATGCCGATACG+TGG + chr8_3:66988455-66988474 None:intergenic 55.0%
TCCCACACTGCACCTCTGAA+TGG - chr8_3:66988535-66988554 Msa1303720:intron 55.0%
GTCTCCTTCTCTTGTGGTCC+TGG - chr8_3:66988628-66988647 Msa1303720:CDS 55.0%
TGCTCCAGGACCACAAGAGA+AGG + chr8_3:66988635-66988654 None:intergenic 55.0%
CTCTTGTGGTCCTGGAGCAT+TGG - chr8_3:66988636-66988655 Msa1303720:CDS 55.0%
CAACAACAGGCCAATGCTCC+AGG + chr8_3:66988649-66988668 None:intergenic 55.0%
GAGGAATCCCCCACAAGAGA+GGG + chr8_3:66988694-66988713 None:intergenic 55.0%
!! AGCTTTGGAACCTGCCCAAG+AGG - chr8_3:66989434-66989453 Msa1303720:intron 55.0%
ACGGGTAGTTGTGACAGGCT+TGG - chr8_3:66989491-66989510 Msa1303720:intron 55.0%
CGGGTAGTTGTGACAGGCTT+GGG - chr8_3:66989492-66989511 Msa1303720:intron 55.0%
AGTTGTGACAGGCTTGGGTG+TGG - chr8_3:66989497-66989516 Msa1303720:intron 55.0%
AATCTGCAGCACGCGACAAC+TGG + chr8_3:66989657-66989676 None:intergenic 55.0%
TGCCATGCTTGCAATGGACC+TGG - chr8_3:66990133-66990152 Msa1303720:intron 55.0%
TGCAGGTTTGGGAGGCTTTG+TGG - chr8_3:66990669-66990688 Msa1303720:intron 55.0%
TGGCATTTATCCCGACCCAG+TGG - chr8_3:66990851-66990870 Msa1303720:intron 55.0%
GTTTGCACCTCTTCTCTGCG+AGG + chr8_3:66991518-66991537 None:intergenic 55.0%
GTGACTGAGCCACATCCTGA+TGG - chr8_3:66991586-66991605 Msa1303720:intron 55.0%
!! AGAAAGGGTGTCCCACAAGC+CGG + chr8_3:66992277-66992296 None:intergenic 55.0%
GGAGCGCATATGAATGTGGG+TGG - chr8_3:66992353-66992372 Msa1303720:intron 55.0%
CAACACATCCCCTCGTGCTA+AGG - chr8_3:66992708-66992727 Msa1303720:intron 55.0%
TGACCAACCCTTAGCACGAG+GGG + chr8_3:66992719-66992738 None:intergenic 55.0%
!! GAAAGGGCATTGGTCCAGTC+GGG - chr8_3:66992898-66992917 Msa1303720:intron 55.0%
CATCTACTAGGTGCATCCGG+TGG - chr8_3:66993201-66993220 Msa1303720:intron 55.0%
CGAGGAATCCCCCACAAGAG+AGG + chr8_3:66988695-66988714 None:intergenic 60.0%
GGGCTCTGCCATGCTTGCAA+TGG - chr8_3:66990127-66990146 Msa1303720:intron 60.0%
! TGGGAGGCTTTGTGGCATGC+CGG - chr8_3:66990677-66990696 Msa1303720:intron 60.0%
TTTGTCATGGGGGAAGGGGC+TGG - chr8_3:66991254-66991273 Msa1303720:CDS 60.0%
CATCCCCTCGTGCTAAGGGT+TGG - chr8_3:66992713-66992732 Msa1303720:intron 60.0%
! TGCTTGTGGTGGGAGCGAGT+GGG - chr8_3:66993874-66993893 Msa1303720:exon 60.0%
TGCGGCGTCTCCCTCTCTTG+TGG - chr8_3:66988681-66988700 Msa1303720:CDS 65.0%
GCGGCGTCTCCCTCTCTTGT+GGG - chr8_3:66988682-66988701 Msa1303720:CDS 65.0%
CGGCGTCTCCCTCTCTTGTG+GGG - chr8_3:66988683-66988702 Msa1303720:CDS 65.0%
GGCGTCTCCCTCTCTTGTGG+GGG - chr8_3:66988684-66988703 Msa1303720:CDS 65.0%
! GGGAGGCTTTGTGGCATGCC+GGG - chr8_3:66990678-66990697 Msa1303720:intron 65.0%
CATGCCGGGCACTCTCCCAA+AGG - chr8_3:66990692-66990711 Msa1303720:intron 65.0%
!! GGGGGAAGGGGCTGGTGTTT+TGG - chr8_3:66991262-66991281 Msa1303720:CDS 65.0%
! GTGCTTGTGGTGGGAGCGAG+TGG - chr8_3:66993873-66993892 Msa1303720:exon 65.0%
AGGGAGACGCCGCATGCTCC+AGG + chr8_3:66988675-66988694 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 66987362 66994257 66987362 ID=Msa1303720;Name=Msa1303720
chr8_3 mRNA 66987362 66994257 66987362 ID=Msa1303720-mRNA-1;Parent=Msa1303720;Name=Msa1303720-mRNA-1;_AED=0.07;_eAED=0.07;_QI=379|1|1|1|0.92|0.92|14|543|491
chr8_3 exon 66987362 66987861 66987362 ID=Msa1303720-mRNA-1:exon:20463;Parent=Msa1303720-mRNA-1
chr8_3 exon 66987953 66988112 66987953 ID=Msa1303720-mRNA-1:exon:20462;Parent=Msa1303720-mRNA-1
chr8_3 exon 66988216 66988275 66988216 ID=Msa1303720-mRNA-1:exon:20461;Parent=Msa1303720-mRNA-1
chr8_3 exon 66988371 66988451 66988371 ID=Msa1303720-mRNA-1:exon:20460;Parent=Msa1303720-mRNA-1
chr8_3 exon 66988590 66988744 66988590 ID=Msa1303720-mRNA-1:exon:20459;Parent=Msa1303720-mRNA-1
chr8_3 exon 66990012 66990096 66990012 ID=Msa1303720-mRNA-1:exon:20458;Parent=Msa1303720-mRNA-1
chr8_3 exon 66990309 66990377 66990309 ID=Msa1303720-mRNA-1:exon:20457;Parent=Msa1303720-mRNA-1
chr8_3 exon 66990866 66990945 66990866 ID=Msa1303720-mRNA-1:exon:20456;Parent=Msa1303720-mRNA-1
chr8_3 exon 66991031 66991076 66991031 ID=Msa1303720-mRNA-1:exon:20455;Parent=Msa1303720-mRNA-1
chr8_3 exon 66991243 66991338 66991243 ID=Msa1303720-mRNA-1:exon:20454;Parent=Msa1303720-mRNA-1
chr8_3 exon 66991465 66991575 66991465 ID=Msa1303720-mRNA-1:exon:20453;Parent=Msa1303720-mRNA-1
chr8_3 exon 66991713 66991916 66991713 ID=Msa1303720-mRNA-1:exon:20452;Parent=Msa1303720-mRNA-1
chr8_3 exon 66991996 66992201 66991996 ID=Msa1303720-mRNA-1:exon:20451;Parent=Msa1303720-mRNA-1
chr8_3 exon 66993713 66994257 66993713 ID=Msa1303720-mRNA-1:exon:20450;Parent=Msa1303720-mRNA-1
chr8_3 five_prime_UTR 66993879 66994257 66993879 ID=Msa1303720-mRNA-1:five_prime_utr;Parent=Msa1303720-mRNA-1
chr8_3 CDS 66993713 66993878 66993713 ID=Msa1303720-mRNA-1:cds;Parent=Msa1303720-mRNA-1
chr8_3 CDS 66991996 66992201 66991996 ID=Msa1303720-mRNA-1:cds;Parent=Msa1303720-mRNA-1
chr8_3 CDS 66991713 66991916 66991713 ID=Msa1303720-mRNA-1:cds;Parent=Msa1303720-mRNA-1
chr8_3 CDS 66991465 66991575 66991465 ID=Msa1303720-mRNA-1:cds;Parent=Msa1303720-mRNA-1
chr8_3 CDS 66991243 66991338 66991243 ID=Msa1303720-mRNA-1:cds;Parent=Msa1303720-mRNA-1
chr8_3 CDS 66991031 66991076 66991031 ID=Msa1303720-mRNA-1:cds;Parent=Msa1303720-mRNA-1
chr8_3 CDS 66990866 66990945 66990866 ID=Msa1303720-mRNA-1:cds;Parent=Msa1303720-mRNA-1
chr8_3 CDS 66990309 66990377 66990309 ID=Msa1303720-mRNA-1:cds;Parent=Msa1303720-mRNA-1
chr8_3 CDS 66990012 66990096 66990012 ID=Msa1303720-mRNA-1:cds;Parent=Msa1303720-mRNA-1
chr8_3 CDS 66988590 66988744 66988590 ID=Msa1303720-mRNA-1:cds;Parent=Msa1303720-mRNA-1
chr8_3 CDS 66988371 66988451 66988371 ID=Msa1303720-mRNA-1:cds;Parent=Msa1303720-mRNA-1
chr8_3 CDS 66988216 66988275 66988216 ID=Msa1303720-mRNA-1:cds;Parent=Msa1303720-mRNA-1
chr8_3 CDS 66987996 66988112 66987996 ID=Msa1303720-mRNA-1:cds;Parent=Msa1303720-mRNA-1
chr8_3 three_prime_UTR 66987953 66987995 66987953 ID=Msa1303720-mRNA-1:three_prime_utr;Parent=Msa1303720-mRNA-1
chr8_3 three_prime_UTR 66987362 66987861 66987362 ID=Msa1303720-mRNA-1:three_prime_utr;Parent=Msa1303720-mRNA-1
Gene Sequence

>Msa1303720

ATGGCTACCACTTCTTCATCACTCTACACGTGGCTTGAACCATCTTGCATGTCAGTCACGTGCGAAGCTGACCGTATCAGAACATCTTTTCACTCTCGCAGAACCAACAACAACGCTCTTTTTCGATCCAATTTCAATACCAAACAAAAACCATCCATTCATTCTGGTAAAACAATGGCAGTAGCTTTGGAACCTGCCCAAGAGGTCACAACAAAGAAAAAACTTCCTACAAAGCAAAGACGGGTAGTTGTGACAGGCTTGGGTGTGGTTACACCACTTGGTCATGATCCAGATATCTTCTACAATAATTTACTCAATGGTGTCAGTGGTATAAGTGAGATTGAGAATTTTGATTGTGCAGAATTTCCGACAAGGATTGCTGGTGAAATTAAGTCTTTTTCAACTGACGGATGGGTAGCACCAAAATTTGTAAAGAGAATGGATAAATTTATGCTCTATCTGCTAACAGCGGGAAAAAAAGCATTGGTTAATGCTGGAATTACTGAAGATGTGATGGATGAGTTAGATAAAACCAAATGTGGAGTTTTAATCGGCTCAGCATTAGGTGGCTTCAAGGTTATTAGTGATTCCATCGAAGCTTTACGAATATCATATAGGAAGATGAATCCTTTCTGTATTCCTTTTGCAACAACAAATATGGGCTCTGCCATGCTTGCAATGGACCTGGGATGGATGGGCCCAAATTATTCTATCTCTACAGCTTGTGCGACAAGTAACTATTGTATATTGAATGCAGCCAACCATATCATCAGAGGTGAAGCTGATGTGATGCTTTGTGGGGGCTCAGACTCTGCTATTATTCCAATTGGTTTGGGAGGCTTTGTGGCATGCCGGGCACTCTCCCAAAGGAATACCGATCCTTCTAAAGCATCACGCCCTTGGGATACTAATCGTGATGGATTTGTCATGGGGGAAGGGGCTGGTGTTTTGGTTTTAGAAGAATTGGAGCATGCTAAGAGAAGAGGTGCAAACATATATGCAGAATTTCTTGGTGGAAGTTTCACCTGCGATGCATATCACGTGACTGAGCCACATCCTGATGGGGCTGGTGTAATACTTTGCATTGAAAGGGCATTGGTCCAGTCGGGAGTTTCAAAAGAGGATGTGAATTACATAAATGCTCATGCTACATCAACACCATCTGGTGATCTTAAGGAATACCAAGCTCTGATTCATTGTTTTGGTAAAAACCCCGAGCTTAGAGTGAATTCTACAAAATCTATGATCGGTCATCTACTAGGTGCATCCGGTGGTGTAGAAGCTGTAGCAACAGTACAGGCAATCAGGACAGGGTGGGTTCATCCTAACATAAACCTTGAAAACCCAGATAAAGACGTGGATACTAAAGTGCTTGTAGGCCCAACAAAAGAGAGATTGAAAATCAAGGCTGCCTTGTCCAATTCATTTGGATTTGGGGGACACAATTCTTCAATTGTATTTGCCCCTTATAAATGA

Protein sequence

>Msa1303720

MATTSSSLYTWLEPSCMSVTCEADRIRTSFHSRRTNNNALFRSNFNTKQKPSIHSGKTMAVALEPAQEVTTKKKLPTKQRRVVVTGLGVVTPLGHDPDIFYNNLLNGVSGISEIENFDCAEFPTRIAGEIKSFSTDGWVAPKFVKRMDKFMLYLLTAGKKALVNAGITEDVMDELDKTKCGVLIGSALGGFKVISDSIEALRISYRKMNPFCIPFATTNMGSAMLAMDLGWMGPNYSISTACATSNYCILNAANHIIRGEADVMLCGGSDSAIIPIGLGGFVACRALSQRNTDPSKASRPWDTNRDGFVMGEGAGVLVLEELEHAKRRGANIYAEFLGGSFTCDAYHVTEPHPDGAGVILCIERALVQSGVSKEDVNYINAHATSTPSGDLKEYQALIHCFGKNPELRVNSTKSMIGHLLGASGGVEAVATVQAIRTGWVHPNINLENPDKDVDTKVLVGPTKERLKIKAALSNSFGFGGHNSSIVFAPYK*