AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0421220


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0421220 MtrunA17_Chr3g0121121 93.651 504 19 1 1 504 1 491 0.0 863
Msa0421220 MtrunA17_Chr7g0275561 35.509 383 225 6 16 390 47 415 1.52e-67 226
Msa0421220 MtrunA17_Chr6g0473071 28.507 442 267 12 32 446 14 433 5.36e-36 139
Msa0421220 MtrunA17_Chr3g0136561 28.668 443 265 15 32 446 7 426 1.94e-35 140
Msa0421220 MtrunA17_Chr6g0462491 26.535 456 277 15 34 454 25 457 1.71e-30 124
Msa0421220 MtrunA17_Chr7g0268361 25.490 408 278 9 38 434 14 406 4.47e-30 122
Msa0421220 MtrunA17_Chr8g0381061 27.666 347 231 8 54 393 35 368 1.06e-29 120
Msa0421220 MtrunA17_Chr7g0255281 25.330 379 261 8 22 395 12 373 2.52e-27 114
Msa0421220 MtrunA17_Chr1g0185761 27.200 375 249 12 44 407 18 379 2.27e-26 110
Msa0421220 MtrunA17_Chr1g0153201 27.688 372 229 9 83 447 52 390 1.78e-25 108
Msa0421220 MtrunA17_Chr3g0115901 28.528 326 213 5 72 391 73 384 1.93e-25 108
Msa0421220 MtrunA17_Chr3g0088781 27.913 369 232 9 83 447 52 390 2.73e-25 107
Msa0421220 MtrunA17_Chr1g0161181 27.123 365 247 10 50 407 27 379 7.45e-25 106
Msa0421220 MtrunA17_Chr3g0088811 29.200 250 170 4 153 402 4 246 9.27e-22 95.9
Msa0421220 MtrunA17_Chr6g0467331 25.672 335 232 7 57 389 31 350 1.36e-21 98.6
Msa0421220 MtrunA17_Chr8g0358271 26.879 346 218 9 62 390 41 368 1.76e-20 93.2
Msa0421220 MtrunA17_Chr7g0220971 25.779 353 242 7 54 401 49 386 2.66e-20 93.2
Msa0421220 MtrunA17_Chr3g0109091 25.220 341 203 13 81 395 77 391 1.08e-19 91.3
Msa0421220 MtrunA17_Chr2g0311491 25.309 324 208 9 175 480 1 308 8.32e-16 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0421220 AT5G62990.1 60.641 437 152 4 32 468 35 451 7.29e-169 486
Msa0421220 AT4G01037.1 33.012 415 229 6 6 390 12 407 3.21e-65 220
Msa0421220 AT5G48040.1 31.564 358 222 8 38 393 28 364 2.58e-35 137
Msa0421220 AT5G45790.2 28.857 350 219 9 58 398 70 398 1.62e-32 129
Msa0421220 AT5G45790.1 29.483 329 204 7 80 398 3 313 8.15e-31 123
Msa0421220 AT3G63090.1 28.534 382 251 11 30 402 9 377 8.81e-30 121
Msa0421220 AT5G21970.1 29.282 362 223 9 52 397 44 388 9.44e-29 119
Msa0421220 AT5G21970.2 29.282 362 223 9 52 397 44 388 9.44e-29 119
Msa0421220 AT2G31290.1 28.000 350 231 8 52 401 24 352 1.59e-28 117
Msa0421220 AT2G31290.2 28.000 350 231 8 52 401 24 352 1.59e-28 117
Msa0421220 AT3G58520.1 27.049 366 242 9 54 408 33 384 4.84e-26 110
Msa0421220 AT4G33495.1 27.226 393 230 11 57 423 47 409 5.36e-26 110
Msa0421220 AT4G08940.1 28.571 315 210 5 72 385 81 381 4.10e-25 107
Msa0421220 AT1G71850.1 25.758 396 257 13 53 429 28 405 5.84e-25 108
Msa0421220 AT4G24320.1 29.781 319 185 10 112 407 79 381 3.59e-24 104
Msa0421220 AT1G79120.1 29.096 354 206 13 58 389 64 394 1.87e-23 102
Msa0421220 AT1G79120.2 29.096 354 206 13 58 389 64 394 1.87e-23 102
Msa0421220 AT1G06440.1 28.025 314 199 8 90 390 71 370 2.83e-23 102
Msa0421220 AT2G39120.1 25.659 417 258 13 31 427 2 386 2.05e-22 99.4
Msa0421220 AT3G58520.2 27.632 304 197 8 116 408 81 372 2.20e-22 99.8

Find 120 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATTCCTCTCAATTTATT+TGG 0.066976 3_2:+70108516 None:intergenic
ACAACAAGATTGGAGAATTT+TGG 0.158344 3_2:-70108089 Msa0421220:CDS
TGATGAGAAGGGTAACTTAT+TGG 0.227907 3_2:-70108421 Msa0421220:CDS
GCTAGGATTGATAAAGAATT+TGG 0.238807 3_2:-70108315 Msa0421220:CDS
CTCTCAGCAGGGTTGTTATA+AGG 0.249237 3_2:+70108666 None:intergenic
CAAACTCGTATAAAATAATT+CGG 0.271674 3_2:+70108482 None:intergenic
TTCTGCTTCAATTGATTCCT+TGG 0.285857 3_2:+70108638 None:intergenic
GTTCACCTTGCTCCTGATCT+TGG 0.289171 3_2:-70108954 Msa0421220:CDS
GAGATAGCATAAGAAGCTTT+TGG 0.290608 3_2:+70109006 None:intergenic
TCTCTCTCTTCTCATTCTCT+TGG 0.292427 3_2:+70108344 None:intergenic
TTGTTATAAGGGCACACTTC+TGG 0.313439 3_2:+70108678 None:intergenic
TAACAACCCTGCTGAGAGTT+TGG 0.314464 3_2:-70108661 Msa0421220:CDS
TCATTCCTCTCAATTTATTT+GGG 0.340961 3_2:+70108517 None:intergenic
ACCCATTTCAGAAAGGAGTT+TGG 0.341767 3_2:-70108543 Msa0421220:CDS
GTCCATCCATTTATCTTGTA+AGG 0.345869 3_2:+70108380 None:intergenic
GTCCAAACTCCTTTCTGAAA+TGG 0.358720 3_2:+70108541 None:intergenic
CTGGATGGTCATTGCACAAC+CGG 0.365261 3_2:+70108910 None:intergenic
ATCGTCTATTTCAACAGTAT+TGG 0.374767 3_2:-70109039 Msa0421220:CDS
TTCAAAGATGATTATGATGA+TGG 0.377284 3_2:-70108180 Msa0421220:CDS
ACTGCAAGTGCGGCTGCAGC+TGG 0.378235 3_2:+70109080 None:intergenic
CACAACCGGGATCTAAAATT+AGG 0.378289 3_2:+70108924 None:intergenic
TTAATCGGAAGAAAATGTTT+TGG 0.380320 3_2:+70109266 None:intergenic
TTGAGAGGTGTGGGTGGCCA+TGG 0.383690 3_2:+70109143 None:intergenic
GCTGTTATAAGAGAGGTTCT+TGG 0.393796 3_2:-70108603 Msa0421220:CDS
TCTCAGCAGGGTTGTTATAA+GGG 0.401018 3_2:+70108667 None:intergenic
TCCAAACTCCTTTCTGAAAT+GGG 0.403617 3_2:+70108542 None:intergenic
GATTTGTTTGACAACAAGAT+TGG 0.413459 3_2:-70108099 Msa0421220:CDS
AAACTCGTATAAAATAATTC+GGG 0.414063 3_2:+70108483 None:intergenic
TCAATGATCTTGAATTTGTC+TGG 0.419429 3_2:+70108891 None:intergenic
CTCAATTGTTTGAACTTCAA+AGG 0.419774 3_2:+70108765 None:intergenic
TTAAAATTCTGTCCAAATGT+AGG 0.422916 3_2:-70109247 Msa0421220:CDS
TCCTTGGCCAAACTCTCAGC+AGG 0.434855 3_2:+70108654 None:intergenic
TGAAAGATAAGCCCTACATT+TGG 0.441339 3_2:+70109235 None:intergenic
CCTTTCTTAGTCAGCAATAA+CGG 0.444662 3_2:-70109506 Msa0421220:CDS
TCTCATCAAATCGCTCTACT+AGG 0.444788 3_2:+70108436 None:intergenic
CAACTATTAAATCAAGAGAA+TGG 0.444997 3_2:+70108793 None:intergenic
TGAGGATGTATTTGAAGACT+TGG 0.457000 3_2:-70108154 Msa0421220:CDS
TGGGACTCACGCGGAGGTAA+AGG 0.457292 3_2:+70108813 None:intergenic
GAAGAGAGAGAAGGAAGGCT+AGG 0.457822 3_2:-70108332 Msa0421220:CDS
AACTATTAAATCAAGAGAAT+GGG 0.459579 3_2:+70108794 None:intergenic
CCAACTTTGCCAGTAGTAAC+CGG 0.459749 3_2:+70108976 None:intergenic
TTGTCATGAGGAACAGAATC+CGG 0.464090 3_2:-70109325 Msa0421220:CDS
TAAAATTCTGTCCAAATGTA+GGG 0.464670 3_2:-70109246 Msa0421220:CDS
TAATTTAAAGAGGCCTCACC+GGG 0.468128 3_2:-70108727 Msa0421220:CDS
GTGGAACTGAGGGAATTTAC+CGG 0.468878 3_2:+70109482 None:intergenic
GAAAGGGGCTTAATTTAAAG+AGG 0.470084 3_2:-70108737 Msa0421220:CDS
AAGATCATTGACACTTCCTA+TGG 0.476208 3_2:-70108879 Msa0421220:CDS
TTCGCGACCGCACTCTTGAC+AGG 0.476319 3_2:-70109352 Msa0421220:CDS
ATAATCAATATCACTGTCAT+CGG 0.482631 3_2:+70108266 None:intergenic
TCCTCACCGCCGGTTACTAC+TGG 0.486639 3_2:-70108985 Msa0421220:CDS
TTAATTTAAAGAGGCCTCAC+CGG 0.489651 3_2:-70108728 Msa0421220:CDS
TTTGAAAGGGCAAAGGGACT+CGG 0.493718 3_2:-70108463 Msa0421220:CDS
TCTTAACTTTGACAATTACC+AGG 0.497120 3_2:+70108014 None:intergenic
TGCAGCCGCACTTGCAGTTG+AGG 0.498535 3_2:-70109075 Msa0421220:CDS
TACGAGTTTGAAAGGGCAAA+GGG 0.499162 3_2:-70108469 Msa0421220:CDS
TTGGAATGACAATTGAAAAG+AGG 0.501920 3_2:-70108584 Msa0421220:CDS
CCGTTATTGCTGACTAAGAA+AGG 0.503193 3_2:+70109506 None:intergenic
AAGCTCAAGTGCACGTCCAT+AGG 0.503889 3_2:+70108863 None:intergenic
TAACTTATTGGAGAAGGATG+AGG 0.511987 3_2:-70108409 Msa0421220:CDS
CCGGTTACTACTGGCAAAGT+TGG 0.519367 3_2:-70108976 Msa0421220:CDS
GGATTGATAAAGAATTTGGC+AGG 0.519833 3_2:-70108311 Msa0421220:CDS
TTGAATTGTTTACTATCCCA+TGG 0.520794 3_2:-70109160 Msa0421220:CDS
TGTCAAACAAATCGTTTCCC+AGG 0.524973 3_2:+70108109 None:intergenic
ATTGTTTGAACTTCAAAGGT+CGG 0.526316 3_2:+70108769 None:intergenic
GAAGCTGAGGATTATGACCT+GGG 0.526953 3_2:-70108126 Msa0421220:CDS
TTAGGAGGAAGACCAAGATC+AGG 0.528609 3_2:+70108942 None:intergenic
TGAGAGGTGTGGGTGGCCAT+GGG 0.529539 3_2:+70109144 None:intergenic
TGAAGCTGAGGATTATGACC+TGG 0.537130 3_2:-70108127 Msa0421220:CDS
ACAAGATAAATGGATGGACT+TGG 0.544745 3_2:-70108376 Msa0421220:CDS
TAATCAATATCACTGTCATC+GGG 0.545096 3_2:+70108267 None:intergenic
TGTTGTTCCACGAAGAAAAG+TGG 0.545285 3_2:+70109463 None:intergenic
ATACGAGTTTGAAAGGGCAA+AGG 0.549737 3_2:-70108470 Msa0421220:CDS
TGTATCGTGCGATACCAACT+TGG 0.550835 3_2:-70108841 Msa0421220:CDS
TCGATGGATCATAGACAGTA+AGG 0.551421 3_2:+70109196 None:intergenic
AGGTAAAGGCTTTGCCAAGT+TGG 0.553621 3_2:+70108827 None:intergenic
GAAGGGTAACTTATTGGAGA+AGG 0.555429 3_2:-70108415 Msa0421220:CDS
TTATGCTATCTCCTCACCGC+CGG 0.555653 3_2:-70108995 Msa0421220:CDS
CCACTTGACCCATTTCAGAA+AGG 0.560006 3_2:-70108550 Msa0421220:CDS
AAACAATTGAGACTTCGAAA+GGG 0.564618 3_2:-70108753 Msa0421220:CDS
CAAACAATTGAGACTTCGAA+AGG 0.569475 3_2:-70108754 Msa0421220:CDS
AATGAGAAGAGAGAGAAGGA+AGG 0.573040 3_2:-70108337 Msa0421220:CDS
CTTAGTTGCGTTGAGAGGTG+TGG 0.573460 3_2:+70109133 None:intergenic
CCTTTCTGAAATGGGTCAAG+TGG 0.574688 3_2:+70108550 None:intergenic
TGATCTTGAATTTGTCTGGA+TGG 0.575399 3_2:+70108895 None:intergenic
CAAACTTTAGCAAGTAATCC+CGG 0.575661 3_2:+70108709 None:intergenic
GGACTCCCAAATAAATTGAG+AGG 0.578071 3_2:-70108522 Msa0421220:CDS
CAATTCCTCAACTGCAAGTG+CGG 0.581658 3_2:+70109070 None:intergenic
AGTAGAGCGATTTGATGAGA+AGG 0.582051 3_2:-70108433 Msa0421220:CDS
CCCTGCTGAGAGTTTGGCCA+AGG 0.582438 3_2:-70108655 Msa0421220:CDS
AACAATTGAGACTTCGAAAG+GGG 0.584929 3_2:-70108752 Msa0421220:CDS
TATAACTTAGTTGCGTTGAG+AGG 0.585447 3_2:+70109128 None:intergenic
CTTAGTCAGCAATAACGGAC+CGG 0.589570 3_2:-70109501 Msa0421220:CDS
ATAAATGGATGGACTTGGCG+AGG 0.596180 3_2:-70108371 Msa0421220:CDS
TGGATGGTCATTGCACAACC+GGG 0.597590 3_2:+70108911 None:intergenic
AGCCTTACAAGATAAATGGA+TGG 0.598756 3_2:-70108382 Msa0421220:CDS
TTAGTTGCGTTGAGAGGTGT+GGG 0.602056 3_2:+70109134 None:intergenic
ACGAAGAAAAGTGGAACTGA+GGG 0.606364 3_2:+70109472 None:intergenic
CTTAACTTTGACAATTACCA+GGG 0.609265 3_2:+70108015 None:intergenic
GAAGACCAAGATCAGGAGCA+AGG 0.612166 3_2:+70108949 None:intergenic
ATGTTGTGCTGTTATAAGAG+AGG 0.617545 3_2:-70108610 Msa0421220:CDS
AACCGGGATCTAAAATTAGG+AGG 0.618298 3_2:+70108927 None:intergenic
TATTGCTGACTAAGAAAGGA+TGG 0.618511 3_2:+70109510 None:intergenic
AATTGAGAGGAATGATTGTG+AGG 0.622196 3_2:-70108509 Msa0421220:CDS
CACGAAGAAAAGTGGAACTG+AGG 0.624701 3_2:+70109471 None:intergenic
TAAATGGATGGACTTGGCGA+GGG 0.625962 3_2:-70108370 Msa0421220:CDS
GTAGAGCGATTTGATGAGAA+GGG 0.626749 3_2:-70108432 Msa0421220:CDS
GCCAGTAGTAACCGGCGGTG+AGG 0.629295 3_2:+70108984 None:intergenic
ATAGAGAACAGAAGCAACCC+TGG 0.633738 3_2:-70108032 Msa0421220:CDS
GTCAAACGAACACATAGTTG+AGG 0.640241 3_2:+70109104 None:intergenic
AGAGAATGAGAAGAGAGAGA+AGG 0.640932 3_2:-70108341 Msa0421220:CDS
CCTTGGCCAAACTCTCAGCA+GGG 0.650031 3_2:+70108655 None:intergenic
AACTCGTATAAAATAATTCG+GGG 0.651846 3_2:+70108484 None:intergenic
TTGACAGGCATGTTGTCATG+AGG 0.677083 3_2:-70109337 Msa0421220:CDS
GTTGCGTTGAGAGGTGTGGG+TGG 0.687295 3_2:+70109137 None:intergenic
TCAAGAGAATGGGACTCACG+CGG 0.693646 3_2:+70108804 None:intergenic
CAACATGCCTGTCAAGAGTG+CGG 0.698613 3_2:+70109345 None:intergenic
AGAGAATGGGACTCACGCGG+AGG 0.722473 3_2:+70108807 None:intergenic
TTTAGCAAGTAATCCCGGTG+AGG 0.724164 3_2:+70108714 None:intergenic
ATCATAGACAGTAAGGAACG+AGG 0.740778 3_2:+70109203 None:intergenic
ACTTTGCCAGTAGTAACCGG+CGG 0.778731 3_2:+70108979 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAGGTTACATGTTTT+TGG + chr3_2:70108140-70108159 None:intergenic 20.0%
!!! TTGAAACAGATAGATTTTTA+AGG + chr3_2:70108154-70108173 None:intergenic 20.0%
!! GATAGTAAACAATTCAAAAA+TGG + chr3_2:70108387-70108406 None:intergenic 20.0%
!! AACTATTAAATCAAGAGAAT+GGG + chr3_2:70108759-70108778 None:intergenic 20.0%
!! AAACTCGTATAAAATAATTC+GGG + chr3_2:70109070-70109089 None:intergenic 20.0%
!! CAAACTCGTATAAAATAATT+CGG + chr3_2:70109071-70109090 None:intergenic 20.0%
!!! TTATTTTATACGAGTTTGAA+AGG - chr3_2:70109073-70109092 Msa0421220:CDS 20.0%
!!! TATTTTATACGAGTTTGAAA+GGG - chr3_2:70109074-70109093 Msa0421220:CDS 20.0%
!!! TTTTTAAGGTTACATGTTTT+TGG + chr3_2:70108140-70108159 None:intergenic 20.0%
!!! TTGAAACAGATAGATTTTTA+AGG + chr3_2:70108154-70108173 None:intergenic 20.0%
!! GATAGTAAACAATTCAAAAA+TGG + chr3_2:70108387-70108406 None:intergenic 20.0%
!! AACTATTAAATCAAGAGAAT+GGG + chr3_2:70108759-70108778 None:intergenic 20.0%
!! AAACTCGTATAAAATAATTC+GGG + chr3_2:70109070-70109089 None:intergenic 20.0%
!! CAAACTCGTATAAAATAATT+CGG + chr3_2:70109071-70109090 None:intergenic 20.0%
!!! TTATTTTATACGAGTTTGAA+AGG - chr3_2:70109073-70109092 Msa0421220:CDS 20.0%
!!! TATTTTATACGAGTTTGAAA+GGG - chr3_2:70109074-70109093 Msa0421220:CDS 20.0%
!! TTAATCGGAAGAAAATGTTT+TGG + chr3_2:70108287-70108306 None:intergenic 25.0%
!!! CATTTGGACAGAATTTTAAT+CGG + chr3_2:70108302-70108321 None:intergenic 25.0%
! TTAAAATTCTGTCCAAATGT+AGG - chr3_2:70108303-70108322 Msa0421220:CDS 25.0%
! TAAAATTCTGTCCAAATGTA+GGG - chr3_2:70108304-70108323 Msa0421220:CDS 25.0%
! GTAAACAATTCAAAAATGGA+TGG + chr3_2:70108383-70108402 None:intergenic 25.0%
! CAACTATTAAATCAAGAGAA+TGG + chr3_2:70108760-70108779 None:intergenic 25.0%
! TCATTCCTCTCAATTTATTT+GGG + chr3_2:70109036-70109055 None:intergenic 25.0%
! ATCATTCCTCTCAATTTATT+TGG + chr3_2:70109037-70109056 None:intergenic 25.0%
! AACTCGTATAAAATAATTCG+GGG + chr3_2:70109069-70109088 None:intergenic 25.0%
!!! TTTTAGCCTTACAAGATAAA+TGG - chr3_2:70109164-70109183 Msa0421220:CDS 25.0%
! ATAATCAATATCACTGTCAT+CGG + chr3_2:70109287-70109306 None:intergenic 25.0%
! TTCAAAGATGATTATGATGA+TGG - chr3_2:70109331-70109350 Msa0421220:CDS 25.0%
!! TTTTCCAATTCAAAATGGTT+CGG - chr3_2:70109495-70109514 Msa0421220:CDS 25.0%
!! TTAATCGGAAGAAAATGTTT+TGG + chr3_2:70108287-70108306 None:intergenic 25.0%
!!! CATTTGGACAGAATTTTAAT+CGG + chr3_2:70108302-70108321 None:intergenic 25.0%
! TTAAAATTCTGTCCAAATGT+AGG - chr3_2:70108303-70108322 Msa0421220:CDS 25.0%
! TAAAATTCTGTCCAAATGTA+GGG - chr3_2:70108304-70108323 Msa0421220:CDS 25.0%
! GTAAACAATTCAAAAATGGA+TGG + chr3_2:70108383-70108402 None:intergenic 25.0%
! CAACTATTAAATCAAGAGAA+TGG + chr3_2:70108760-70108779 None:intergenic 25.0%
! TCATTCCTCTCAATTTATTT+GGG + chr3_2:70109036-70109055 None:intergenic 25.0%
! ATCATTCCTCTCAATTTATT+TGG + chr3_2:70109037-70109056 None:intergenic 25.0%
! AACTCGTATAAAATAATTCG+GGG + chr3_2:70109069-70109088 None:intergenic 25.0%
!!! TTTTAGCCTTACAAGATAAA+TGG - chr3_2:70109164-70109183 Msa0421220:CDS 25.0%
! ATAATCAATATCACTGTCAT+CGG + chr3_2:70109287-70109306 None:intergenic 25.0%
! TTCAAAGATGATTATGATGA+TGG - chr3_2:70109331-70109350 Msa0421220:CDS 25.0%
!! TTTTCCAATTCAAAATGGTT+CGG - chr3_2:70109495-70109514 Msa0421220:CDS 25.0%
CTATTCACAGAAAAAGATGA+AGG + chr3_2:70108113-70108132 None:intergenic 30.0%
! TTTTCAGCTTTTGAACAAAC+CGG + chr3_2:70108247-70108266 None:intergenic 30.0%
TTGAATTGTTTACTATCCCA+TGG - chr3_2:70108390-70108409 Msa0421220:CDS 30.0%
ATCGTCTATTTCAACAGTAT+TGG - chr3_2:70108511-70108530 Msa0421220:CDS 30.0%
TCAATGATCTTGAATTTGTC+TGG + chr3_2:70108662-70108681 None:intergenic 30.0%
ATTGTTTGAACTTCAAAGGT+CGG + chr3_2:70108784-70108803 None:intergenic 30.0%
CTCAATTGTTTGAACTTCAA+AGG + chr3_2:70108788-70108807 None:intergenic 30.0%
AAACAATTGAGACTTCGAAA+GGG - chr3_2:70108797-70108816 Msa0421220:CDS 30.0%
TTGGAATGACAATTGAAAAG+AGG - chr3_2:70108966-70108985 Msa0421220:CDS 30.0%
GCTAGGATTGATAAAGAATT+TGG - chr3_2:70109235-70109254 Msa0421220:CDS 30.0%
TAATCAATATCACTGTCATC+GGG + chr3_2:70109286-70109305 None:intergenic 30.0%
!!! TGATTATGATGATGGTTTTG+AGG - chr3_2:70109378-70109397 Msa0421220:CDS 30.0%
! GATTTGTTTGACAACAAGAT+TGG - chr3_2:70109451-70109470 Msa0421220:CDS 30.0%
! ACAACAAGATTGGAGAATTT+TGG - chr3_2:70109461-70109480 Msa0421220:CDS 30.0%
! GAACCATTTTGAATTGGAAA+AGG + chr3_2:70109496-70109515 None:intergenic 30.0%
CTATTCACAGAAAAAGATGA+AGG + chr3_2:70108113-70108132 None:intergenic 30.0%
! TTTTCAGCTTTTGAACAAAC+CGG + chr3_2:70108247-70108266 None:intergenic 30.0%
TTGAATTGTTTACTATCCCA+TGG - chr3_2:70108390-70108409 Msa0421220:CDS 30.0%
ATCGTCTATTTCAACAGTAT+TGG - chr3_2:70108511-70108530 Msa0421220:CDS 30.0%
TCAATGATCTTGAATTTGTC+TGG + chr3_2:70108662-70108681 None:intergenic 30.0%
ATTGTTTGAACTTCAAAGGT+CGG + chr3_2:70108784-70108803 None:intergenic 30.0%
CTCAATTGTTTGAACTTCAA+AGG + chr3_2:70108788-70108807 None:intergenic 30.0%
AAACAATTGAGACTTCGAAA+GGG - chr3_2:70108797-70108816 Msa0421220:CDS 30.0%
TTGGAATGACAATTGAAAAG+AGG - chr3_2:70108966-70108985 Msa0421220:CDS 30.0%
GCTAGGATTGATAAAGAATT+TGG - chr3_2:70109235-70109254 Msa0421220:CDS 30.0%
TAATCAATATCACTGTCATC+GGG + chr3_2:70109286-70109305 None:intergenic 30.0%
!!! TGATTATGATGATGGTTTTG+AGG - chr3_2:70109378-70109397 Msa0421220:CDS 30.0%
! GATTTGTTTGACAACAAGAT+TGG - chr3_2:70109451-70109470 Msa0421220:CDS 30.0%
! ACAACAAGATTGGAGAATTT+TGG - chr3_2:70109461-70109480 Msa0421220:CDS 30.0%
! GAACCATTTTGAATTGGAAA+AGG + chr3_2:70109496-70109515 None:intergenic 30.0%
! TATTGCTGACTAAGAAAGGA+TGG + chr3_2:70108043-70108062 None:intergenic 35.0%
CCTTTCTTAGTCAGCAATAA+CGG - chr3_2:70108044-70108063 Msa0421220:CDS 35.0%
TGAAAGATAAGCCCTACATT+TGG + chr3_2:70108318-70108337 None:intergenic 35.0%
CAAAAATGGATGGATATCGA+TGG + chr3_2:70108373-70108392 None:intergenic 35.0%
TATAACTTAGTTGCGTTGAG+AGG + chr3_2:70108425-70108444 None:intergenic 35.0%
! GAGATAGCATAAGAAGCTTT+TGG + chr3_2:70108547-70108566 None:intergenic 35.0%
! TTCCTCCTAATTTTAGATCC+CGG - chr3_2:70108621-70108640 Msa0421220:CDS 35.0%
TGATCTTGAATTTGTCTGGA+TGG + chr3_2:70108658-70108677 None:intergenic 35.0%
AAGATCATTGACACTTCCTA+TGG - chr3_2:70108671-70108690 Msa0421220:CDS 35.0%
CAAACAATTGAGACTTCGAA+AGG - chr3_2:70108796-70108815 Msa0421220:CDS 35.0%
AACAATTGAGACTTCGAAAG+GGG - chr3_2:70108798-70108817 Msa0421220:CDS 35.0%
GAAAGGGGCTTAATTTAAAG+AGG - chr3_2:70108813-70108832 Msa0421220:CDS 35.0%
TTAATTTAAAGAGGCCTCAC+CGG - chr3_2:70108822-70108841 Msa0421220:CDS 35.0%
CAAACTTTAGCAAGTAATCC+CGG + chr3_2:70108844-70108863 None:intergenic 35.0%
! TTCTGCTTCAATTGATTCCT+TGG + chr3_2:70108915-70108934 None:intergenic 35.0%
! ATGTTGTGCTGTTATAAGAG+AGG - chr3_2:70108940-70108959 Msa0421220:CDS 35.0%
!! TCCAAACTCCTTTCTGAAAT+GGG + chr3_2:70109011-70109030 None:intergenic 35.0%
AATTGAGAGGAATGATTGTG+AGG - chr3_2:70109041-70109060 Msa0421220:CDS 35.0%
TGATGAGAAGGGTAACTTAT+TGG - chr3_2:70109129-70109148 Msa0421220:CDS 35.0%
TAACTTATTGGAGAAGGATG+AGG - chr3_2:70109141-70109160 Msa0421220:CDS 35.0%
AGCCTTACAAGATAAATGGA+TGG - chr3_2:70109168-70109187 Msa0421220:CDS 35.0%
GTCCATCCATTTATCTTGTA+AGG + chr3_2:70109173-70109192 None:intergenic 35.0%
! ACAAGATAAATGGATGGACT+TGG - chr3_2:70109174-70109193 Msa0421220:CDS 35.0%
GGATTGATAAAGAATTTGGC+AGG - chr3_2:70109239-70109258 Msa0421220:CDS 35.0%
TGAGGATGTATTTGAAGACT+TGG - chr3_2:70109396-70109415 Msa0421220:CDS 35.0%
! GGACCTTTTCCAATTCAAAA+TGG - chr3_2:70109490-70109509 Msa0421220:CDS 35.0%
! CTATCCGAACCATTTTGAAT+TGG + chr3_2:70109502-70109521 None:intergenic 35.0%
! TATTGCTGACTAAGAAAGGA+TGG + chr3_2:70108043-70108062 None:intergenic 35.0%
CCTTTCTTAGTCAGCAATAA+CGG - chr3_2:70108044-70108063 Msa0421220:CDS 35.0%
TGAAAGATAAGCCCTACATT+TGG + chr3_2:70108318-70108337 None:intergenic 35.0%
CAAAAATGGATGGATATCGA+TGG + chr3_2:70108373-70108392 None:intergenic 35.0%
TATAACTTAGTTGCGTTGAG+AGG + chr3_2:70108425-70108444 None:intergenic 35.0%
! GAGATAGCATAAGAAGCTTT+TGG + chr3_2:70108547-70108566 None:intergenic 35.0%
! TTCCTCCTAATTTTAGATCC+CGG - chr3_2:70108621-70108640 Msa0421220:CDS 35.0%
TGATCTTGAATTTGTCTGGA+TGG + chr3_2:70108658-70108677 None:intergenic 35.0%
AAGATCATTGACACTTCCTA+TGG - chr3_2:70108671-70108690 Msa0421220:CDS 35.0%
CAAACAATTGAGACTTCGAA+AGG - chr3_2:70108796-70108815 Msa0421220:CDS 35.0%
AACAATTGAGACTTCGAAAG+GGG - chr3_2:70108798-70108817 Msa0421220:CDS 35.0%
GAAAGGGGCTTAATTTAAAG+AGG - chr3_2:70108813-70108832 Msa0421220:CDS 35.0%
TTAATTTAAAGAGGCCTCAC+CGG - chr3_2:70108822-70108841 Msa0421220:CDS 35.0%
CAAACTTTAGCAAGTAATCC+CGG + chr3_2:70108844-70108863 None:intergenic 35.0%
! TTCTGCTTCAATTGATTCCT+TGG + chr3_2:70108915-70108934 None:intergenic 35.0%
! ATGTTGTGCTGTTATAAGAG+AGG - chr3_2:70108940-70108959 Msa0421220:CDS 35.0%
!! TCCAAACTCCTTTCTGAAAT+GGG + chr3_2:70109011-70109030 None:intergenic 35.0%
AATTGAGAGGAATGATTGTG+AGG - chr3_2:70109041-70109060 Msa0421220:CDS 35.0%
TGATGAGAAGGGTAACTTAT+TGG - chr3_2:70109129-70109148 Msa0421220:CDS 35.0%
TAACTTATTGGAGAAGGATG+AGG - chr3_2:70109141-70109160 Msa0421220:CDS 35.0%
AGCCTTACAAGATAAATGGA+TGG - chr3_2:70109168-70109187 Msa0421220:CDS 35.0%
GTCCATCCATTTATCTTGTA+AGG + chr3_2:70109173-70109192 None:intergenic 35.0%
! ACAAGATAAATGGATGGACT+TGG - chr3_2:70109174-70109193 Msa0421220:CDS 35.0%
GGATTGATAAAGAATTTGGC+AGG - chr3_2:70109239-70109258 Msa0421220:CDS 35.0%
TGAGGATGTATTTGAAGACT+TGG - chr3_2:70109396-70109415 Msa0421220:CDS 35.0%
! GGACCTTTTCCAATTCAAAA+TGG - chr3_2:70109490-70109509 Msa0421220:CDS 35.0%
! CTATCCGAACCATTTTGAAT+TGG + chr3_2:70109502-70109521 None:intergenic 35.0%
! CCGTTATTGCTGACTAAGAA+AGG + chr3_2:70108047-70108066 None:intergenic 40.0%
ACGAAGAAAAGTGGAACTGA+GGG + chr3_2:70108081-70108100 None:intergenic 40.0%
TGTTGTTCCACGAAGAAAAG+TGG + chr3_2:70108090-70108109 None:intergenic 40.0%
TTGTCATGAGGAACAGAATC+CGG - chr3_2:70108225-70108244 Msa0421220:CDS 40.0%
ATCATAGACAGTAAGGAACG+AGG + chr3_2:70108350-70108369 None:intergenic 40.0%
TCGATGGATCATAGACAGTA+AGG + chr3_2:70108357-70108376 None:intergenic 40.0%
GTCAAACGAACACATAGTTG+AGG + chr3_2:70108449-70108468 None:intergenic 40.0%
! AACCGGGATCTAAAATTAGG+AGG + chr3_2:70108626-70108645 None:intergenic 40.0%
! CACAACCGGGATCTAAAATT+AGG + chr3_2:70108629-70108648 None:intergenic 40.0%
TAATTTAAAGAGGCCTCACC+GGG - chr3_2:70108823-70108842 Msa0421220:CDS 40.0%
! TTGTTATAAGGGCACACTTC+TGG + chr3_2:70108875-70108894 None:intergenic 40.0%
TCTCAGCAGGGTTGTTATAA+GGG + chr3_2:70108886-70108905 None:intergenic 40.0%
GCTGTTATAAGAGAGGTTCT+TGG - chr3_2:70108947-70108966 Msa0421220:CDS 40.0%
ACCCATTTCAGAAAGGAGTT+TGG - chr3_2:70109007-70109026 Msa0421220:CDS 40.0%
! GTCCAAACTCCTTTCTGAAA+TGG + chr3_2:70109012-70109031 None:intergenic 40.0%
GGACTCCCAAATAAATTGAG+AGG - chr3_2:70109028-70109047 Msa0421220:CDS 40.0%
ATACGAGTTTGAAAGGGCAA+AGG - chr3_2:70109080-70109099 Msa0421220:CDS 40.0%
TACGAGTTTGAAAGGGCAAA+GGG - chr3_2:70109081-70109100 Msa0421220:CDS 40.0%
TCTCATCAAATCGCTCTACT+AGG + chr3_2:70109117-70109136 None:intergenic 40.0%
AGTAGAGCGATTTGATGAGA+AGG - chr3_2:70109117-70109136 Msa0421220:CDS 40.0%
GTAGAGCGATTTGATGAGAA+GGG - chr3_2:70109118-70109137 Msa0421220:CDS 40.0%
GAAGGGTAACTTATTGGAGA+AGG - chr3_2:70109135-70109154 Msa0421220:CDS 40.0%
TCTCTCTCTTCTCATTCTCT+TGG + chr3_2:70109209-70109228 None:intergenic 40.0%
AGAGAATGAGAAGAGAGAGA+AGG - chr3_2:70109209-70109228 Msa0421220:CDS 40.0%
AATGAGAAGAGAGAGAAGGA+AGG - chr3_2:70109213-70109232 Msa0421220:CDS 40.0%
!!! AGACTTGGATTTTGAAGCTG+AGG - chr3_2:70109411-70109430 Msa0421220:CDS 40.0%
TGTCAAACAAATCGTTTCCC+AGG + chr3_2:70109444-70109463 None:intergenic 40.0%
! ATTGGAGAATTTTGGACTGC+AGG - chr3_2:70109469-70109488 Msa0421220:CDS 40.0%
! CCGTTATTGCTGACTAAGAA+AGG + chr3_2:70108047-70108066 None:intergenic 40.0%
ACGAAGAAAAGTGGAACTGA+GGG + chr3_2:70108081-70108100 None:intergenic 40.0%
TGTTGTTCCACGAAGAAAAG+TGG + chr3_2:70108090-70108109 None:intergenic 40.0%
TTGTCATGAGGAACAGAATC+CGG - chr3_2:70108225-70108244 Msa0421220:CDS 40.0%
ATCATAGACAGTAAGGAACG+AGG + chr3_2:70108350-70108369 None:intergenic 40.0%
TCGATGGATCATAGACAGTA+AGG + chr3_2:70108357-70108376 None:intergenic 40.0%
GTCAAACGAACACATAGTTG+AGG + chr3_2:70108449-70108468 None:intergenic 40.0%
! AACCGGGATCTAAAATTAGG+AGG + chr3_2:70108626-70108645 None:intergenic 40.0%
! CACAACCGGGATCTAAAATT+AGG + chr3_2:70108629-70108648 None:intergenic 40.0%
TAATTTAAAGAGGCCTCACC+GGG - chr3_2:70108823-70108842 Msa0421220:CDS 40.0%
! TTGTTATAAGGGCACACTTC+TGG + chr3_2:70108875-70108894 None:intergenic 40.0%
TCTCAGCAGGGTTGTTATAA+GGG + chr3_2:70108886-70108905 None:intergenic 40.0%
GCTGTTATAAGAGAGGTTCT+TGG - chr3_2:70108947-70108966 Msa0421220:CDS 40.0%
ACCCATTTCAGAAAGGAGTT+TGG - chr3_2:70109007-70109026 Msa0421220:CDS 40.0%
! GTCCAAACTCCTTTCTGAAA+TGG + chr3_2:70109012-70109031 None:intergenic 40.0%
GGACTCCCAAATAAATTGAG+AGG - chr3_2:70109028-70109047 Msa0421220:CDS 40.0%
ATACGAGTTTGAAAGGGCAA+AGG - chr3_2:70109080-70109099 Msa0421220:CDS 40.0%
TACGAGTTTGAAAGGGCAAA+GGG - chr3_2:70109081-70109100 Msa0421220:CDS 40.0%
TCTCATCAAATCGCTCTACT+AGG + chr3_2:70109117-70109136 None:intergenic 40.0%
AGTAGAGCGATTTGATGAGA+AGG - chr3_2:70109117-70109136 Msa0421220:CDS 40.0%
GTAGAGCGATTTGATGAGAA+GGG - chr3_2:70109118-70109137 Msa0421220:CDS 40.0%
GAAGGGTAACTTATTGGAGA+AGG - chr3_2:70109135-70109154 Msa0421220:CDS 40.0%
TCTCTCTCTTCTCATTCTCT+TGG + chr3_2:70109209-70109228 None:intergenic 40.0%
AGAGAATGAGAAGAGAGAGA+AGG - chr3_2:70109209-70109228 Msa0421220:CDS 40.0%
AATGAGAAGAGAGAGAAGGA+AGG - chr3_2:70109213-70109232 Msa0421220:CDS 40.0%
!!! AGACTTGGATTTTGAAGCTG+AGG - chr3_2:70109411-70109430 Msa0421220:CDS 40.0%
TGTCAAACAAATCGTTTCCC+AGG + chr3_2:70109444-70109463 None:intergenic 40.0%
! ATTGGAGAATTTTGGACTGC+AGG - chr3_2:70109469-70109488 Msa0421220:CDS 40.0%
!! CTTAGTCAGCAATAACGGAC+CGG - chr3_2:70108049-70108068 Msa0421220:CDS 45.0%
GTGGAACTGAGGGAATTTAC+CGG + chr3_2:70108071-70108090 None:intergenic 45.0%
CACGAAGAAAAGTGGAACTG+AGG + chr3_2:70108082-70108101 None:intergenic 45.0%
!! CTCAGTTCCACTTTTCTTCG+TGG - chr3_2:70108080-70108099 Msa0421220:CDS 45.0%
TTGACAGGCATGTTGTCATG+AGG - chr3_2:70108213-70108232 Msa0421220:CDS 45.0%
! TTAGTTGCGTTGAGAGGTGT+GGG + chr3_2:70108419-70108438 None:intergenic 45.0%
CAATTCCTCAACTGCAAGTG+CGG + chr3_2:70108483-70108502 None:intergenic 45.0%
CCAACTTTGCCAGTAGTAAC+CGG + chr3_2:70108577-70108596 None:intergenic 45.0%
TTAGGAGGAAGACCAAGATC+AGG + chr3_2:70108611-70108630 None:intergenic 45.0%
TGTATCGTGCGATACCAACT+TGG - chr3_2:70108709-70108728 Msa0421220:CDS 45.0%
AGGTAAAGGCTTTGCCAAGT+TGG + chr3_2:70108726-70108745 None:intergenic 45.0%
TTTAGCAAGTAATCCCGGTG+AGG + chr3_2:70108839-70108858 None:intergenic 45.0%
CTCTCAGCAGGGTTGTTATA+AGG + chr3_2:70108887-70108906 None:intergenic 45.0%
TAACAACCCTGCTGAGAGTT+TGG - chr3_2:70108889-70108908 Msa0421220:CDS 45.0%
!! CCTTTCTGAAATGGGTCAAG+TGG + chr3_2:70109003-70109022 None:intergenic 45.0%
CCACTTGACCCATTTCAGAA+AGG - chr3_2:70109000-70109019 Msa0421220:CDS 45.0%
TTTGAAAGGGCAAAGGGACT+CGG - chr3_2:70109087-70109106 Msa0421220:CDS 45.0%
! ATAAATGGATGGACTTGGCG+AGG - chr3_2:70109179-70109198 Msa0421220:CDS 45.0%
! TAAATGGATGGACTTGGCGA+GGG - chr3_2:70109180-70109199 Msa0421220:CDS 45.0%
TGAAGCTGAGGATTATGACC+TGG - chr3_2:70109423-70109442 Msa0421220:CDS 45.0%
GAAGCTGAGGATTATGACCT+GGG - chr3_2:70109424-70109443 Msa0421220:CDS 45.0%
ATAGAGAACAGAAGCAACCC+TGG - chr3_2:70109518-70109537 Msa0421220:CDS 45.0%
!! CTTAGTCAGCAATAACGGAC+CGG - chr3_2:70108049-70108068 Msa0421220:CDS 45.0%
GTGGAACTGAGGGAATTTAC+CGG + chr3_2:70108071-70108090 None:intergenic 45.0%
CACGAAGAAAAGTGGAACTG+AGG + chr3_2:70108082-70108101 None:intergenic 45.0%
!! CTCAGTTCCACTTTTCTTCG+TGG - chr3_2:70108080-70108099 Msa0421220:CDS 45.0%
TTGACAGGCATGTTGTCATG+AGG - chr3_2:70108213-70108232 Msa0421220:CDS 45.0%
! TTAGTTGCGTTGAGAGGTGT+GGG + chr3_2:70108419-70108438 None:intergenic 45.0%
CAATTCCTCAACTGCAAGTG+CGG + chr3_2:70108483-70108502 None:intergenic 45.0%
CCAACTTTGCCAGTAGTAAC+CGG + chr3_2:70108577-70108596 None:intergenic 45.0%
TTAGGAGGAAGACCAAGATC+AGG + chr3_2:70108611-70108630 None:intergenic 45.0%
TGTATCGTGCGATACCAACT+TGG - chr3_2:70108709-70108728 Msa0421220:CDS 45.0%
AGGTAAAGGCTTTGCCAAGT+TGG + chr3_2:70108726-70108745 None:intergenic 45.0%
TTTAGCAAGTAATCCCGGTG+AGG + chr3_2:70108839-70108858 None:intergenic 45.0%
CTCTCAGCAGGGTTGTTATA+AGG + chr3_2:70108887-70108906 None:intergenic 45.0%
TAACAACCCTGCTGAGAGTT+TGG - chr3_2:70108889-70108908 Msa0421220:CDS 45.0%
!! CCTTTCTGAAATGGGTCAAG+TGG + chr3_2:70109003-70109022 None:intergenic 45.0%
CCACTTGACCCATTTCAGAA+AGG - chr3_2:70109000-70109019 Msa0421220:CDS 45.0%
TTTGAAAGGGCAAAGGGACT+CGG - chr3_2:70109087-70109106 Msa0421220:CDS 45.0%
! ATAAATGGATGGACTTGGCG+AGG - chr3_2:70109179-70109198 Msa0421220:CDS 45.0%
! TAAATGGATGGACTTGGCGA+GGG - chr3_2:70109180-70109199 Msa0421220:CDS 45.0%
TGAAGCTGAGGATTATGACC+TGG - chr3_2:70109423-70109442 Msa0421220:CDS 45.0%
GAAGCTGAGGATTATGACCT+GGG - chr3_2:70109424-70109443 Msa0421220:CDS 45.0%
ATAGAGAACAGAAGCAACCC+TGG - chr3_2:70109518-70109537 Msa0421220:CDS 45.0%
CAACATGCCTGTCAAGAGTG+CGG + chr3_2:70108208-70108227 None:intergenic 50.0%
CTTAGTTGCGTTGAGAGGTG+TGG + chr3_2:70108420-70108439 None:intergenic 50.0%
TTATGCTATCTCCTCACCGC+CGG - chr3_2:70108555-70108574 Msa0421220:CDS 50.0%
ACTTTGCCAGTAGTAACCGG+CGG + chr3_2:70108574-70108593 None:intergenic 50.0%
CCGGTTACTACTGGCAAAGT+TGG - chr3_2:70108574-70108593 Msa0421220:CDS 50.0%
GTTCACCTTGCTCCTGATCT+TGG - chr3_2:70108596-70108615 Msa0421220:CDS 50.0%
GAAGACCAAGATCAGGAGCA+AGG + chr3_2:70108604-70108623 None:intergenic 50.0%
TGGATGGTCATTGCACAACC+GGG + chr3_2:70108642-70108661 None:intergenic 50.0%
CTGGATGGTCATTGCACAAC+CGG + chr3_2:70108643-70108662 None:intergenic 50.0%
AAGCTCAAGTGCACGTCCAT+AGG + chr3_2:70108690-70108709 None:intergenic 50.0%
TCAAGAGAATGGGACTCACG+CGG + chr3_2:70108749-70108768 None:intergenic 50.0%
GAAGAGAGAGAAGGAAGGCT+AGG - chr3_2:70109218-70109237 Msa0421220:CDS 50.0%
CAACATGCCTGTCAAGAGTG+CGG + chr3_2:70108208-70108227 None:intergenic 50.0%
CTTAGTTGCGTTGAGAGGTG+TGG + chr3_2:70108420-70108439 None:intergenic 50.0%
TTATGCTATCTCCTCACCGC+CGG - chr3_2:70108555-70108574 Msa0421220:CDS 50.0%
ACTTTGCCAGTAGTAACCGG+CGG + chr3_2:70108574-70108593 None:intergenic 50.0%
CCGGTTACTACTGGCAAAGT+TGG - chr3_2:70108574-70108593 Msa0421220:CDS 50.0%
GTTCACCTTGCTCCTGATCT+TGG - chr3_2:70108596-70108615 Msa0421220:CDS 50.0%
GAAGACCAAGATCAGGAGCA+AGG + chr3_2:70108604-70108623 None:intergenic 50.0%
TGGATGGTCATTGCACAACC+GGG + chr3_2:70108642-70108661 None:intergenic 50.0%
CTGGATGGTCATTGCACAAC+CGG + chr3_2:70108643-70108662 None:intergenic 50.0%
AAGCTCAAGTGCACGTCCAT+AGG + chr3_2:70108690-70108709 None:intergenic 50.0%
TCAAGAGAATGGGACTCACG+CGG + chr3_2:70108749-70108768 None:intergenic 50.0%
GAAGAGAGAGAAGGAAGGCT+AGG - chr3_2:70109218-70109237 Msa0421220:CDS 50.0%
CCTTGGCCAAACTCTCAGCA+GGG + chr3_2:70108898-70108917 None:intergenic 55.0%
TCCTTGGCCAAACTCTCAGC+AGG + chr3_2:70108899-70108918 None:intergenic 55.0%
CCTTGGCCAAACTCTCAGCA+GGG + chr3_2:70108898-70108917 None:intergenic 55.0%
TCCTTGGCCAAACTCTCAGC+AGG + chr3_2:70108899-70108918 None:intergenic 55.0%
TTCGCGACCGCACTCTTGAC+AGG - chr3_2:70108198-70108217 Msa0421220:CDS 60.0%
! TGAGAGGTGTGGGTGGCCAT+GGG + chr3_2:70108409-70108428 None:intergenic 60.0%
! TTGAGAGGTGTGGGTGGCCA+TGG + chr3_2:70108410-70108429 None:intergenic 60.0%
! GTTGCGTTGAGAGGTGTGGG+TGG + chr3_2:70108416-70108435 None:intergenic 60.0%
TGCAGCCGCACTTGCAGTTG+AGG - chr3_2:70108475-70108494 Msa0421220:CDS 60.0%
! TCCTCACCGCCGGTTACTAC+TGG - chr3_2:70108565-70108584 Msa0421220:CDS 60.0%
TGGGACTCACGCGGAGGTAA+AGG + chr3_2:70108740-70108759 None:intergenic 60.0%
AGAGAATGGGACTCACGCGG+AGG + chr3_2:70108746-70108765 None:intergenic 60.0%
CCCTGCTGAGAGTTTGGCCA+AGG - chr3_2:70108895-70108914 Msa0421220:CDS 60.0%
TTCGCGACCGCACTCTTGAC+AGG - chr3_2:70108198-70108217 Msa0421220:CDS 60.0%
! TGAGAGGTGTGGGTGGCCAT+GGG + chr3_2:70108409-70108428 None:intergenic 60.0%
! TTGAGAGGTGTGGGTGGCCA+TGG + chr3_2:70108410-70108429 None:intergenic 60.0%
! GTTGCGTTGAGAGGTGTGGG+TGG + chr3_2:70108416-70108435 None:intergenic 60.0%
TGCAGCCGCACTTGCAGTTG+AGG - chr3_2:70108475-70108494 Msa0421220:CDS 60.0%
! TCCTCACCGCCGGTTACTAC+TGG - chr3_2:70108565-70108584 Msa0421220:CDS 60.0%
TGGGACTCACGCGGAGGTAA+AGG + chr3_2:70108740-70108759 None:intergenic 60.0%
AGAGAATGGGACTCACGCGG+AGG + chr3_2:70108746-70108765 None:intergenic 60.0%
CCCTGCTGAGAGTTTGGCCA+AGG - chr3_2:70108895-70108914 Msa0421220:CDS 60.0%
ACTGCAAGTGCGGCTGCAGC+TGG + chr3_2:70108473-70108492 None:intergenic 65.0%
GCCAGTAGTAACCGGCGGTG+AGG + chr3_2:70108569-70108588 None:intergenic 65.0%
ACTGCAAGTGCGGCTGCAGC+TGG + chr3_2:70108473-70108492 None:intergenic 65.0%
GCCAGTAGTAACCGGCGGTG+AGG + chr3_2:70108569-70108588 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 70108029 70109543 70108029 ID=Msa0421220;Name=Msa0421220
chr3_2 mRNA 70108029 70109543 70108029 ID=Msa0421220-mRNA-1;Parent=Msa0421220;Name=Msa0421220-mRNA-1;_AED=0.18;_eAED=0.21;_QI=0|-1|0|1|-1|1|1|0|504
chr3_2 exon 70108029 70109543 70108029 ID=Msa0421220-mRNA-1:exon:16818;Parent=Msa0421220-mRNA-1
chr3_2 CDS 70108029 70109543 70108029 ID=Msa0421220-mRNA-1:cds;Parent=Msa0421220-mRNA-1
Gene Sequence

>Msa0421220

ATGGCATTGTGCCATCCTTTCTTAGTCAGCAATAACGGACCGGTAAATTCCCTCAGTTCCACTTTTCTTCGTGGAACAACACCTTCATCTTTTTCTGTGAATAGAAAACCAAAAACATGTAACCTTAAAAATCTATCTGTTTCAATTAGTTGTTCGTCTCTTAAAACTGTTCGCGACCGCACTCTTGACAGGCATGTTGTCATGAGGAACAGAATCCGGTTTGTTCAAAAGCTGAAAACTTTGCTTCTTTCTAAACCAAAACATTTTCTTCCGATTAAAATTCTGTCCAAATGTAGGGCTTATCTTTCACTTCATAAGCCTCGTTCCTTACTGTCTATGATCCATCGATATCCATCCATTTTTGAATTGTTTACTATCCCATGGCCACCCACACCTCTCAACGCAACTAAGTTATATCCTCAACTATGTGTTCGTTTGACTCCAGCTGCAGCCGCACTTGCAGTTGAGGAATTGAATCTTAAATCGTCTATTTCAACAGTATTGGCAAACAAACTCCAAAAGCTTCTTATGCTATCTCCTCACCGCCGGTTACTACTGGCAAAGTTGGTTCACCTTGCTCCTGATCTTGGTCTTCCTCCTAATTTTAGATCCCGGTTGTGCAATGACCATCCAGACAAATTCAAGATCATTGACACTTCCTATGGACGTGCACTTGAGCTTGTATCGTGCGATACCAACTTGGCAAAGCCTTTACCTCCGCGTGAGTCCCATTCTCTTGATTTAATAGTTGACCGACCTTTGAAGTTCAAACAATTGAGACTTCGAAAGGGGCTTAATTTAAAGAGGCCTCACCGGGATTACTTGCTAAAGTTTGAAGAAGTGCCAGAAGTGTGCCCTTATAACAACCCTGCTGAGAGTTTGGCCAAGGAATCAATTGAAGCAGAAAAGAGATGTTGTGCTGTTATAAGAGAGGTTCTTGGAATGACAATTGAAAAGAGGACATTAATAGACCACTTGACCCATTTCAGAAAGGAGTTTGGACTCCCAAATAAATTGAGAGGAATGATTGTGAGGCACCCCGAATTATTTTATACGAGTTTGAAAGGGCAAAGGGACTCGGTTTTCCTAGTAGAGCGATTTGATGAGAAGGGTAACTTATTGGAGAAGGATGAGGTTTTAGCCTTACAAGATAAATGGATGGACTTGGCGAGGGAGTCCAAGAGAATGAGAAGAGAGAGAAGGAAGGCTAGGATTGATAAAGAATTTGGCAGGTTGAGTGATGTAAATCAAAATCCCGATGACAGTGATATTGATTATGATGATGATATTGAGATTGATAATTTCAAAGATGATTATGATGATGATATTGAGATTGATAATTTCAAAGATGATTATGATGATGGTTTTGAGGATGTATTTGAAGACTTGGATTTTGAAGCTGAGGATTATGACCTGGGAAACGATTTGTTTGACAACAAGATTGGAGAATTTTGGACTGCAGGACCTTTTCCAATTCAAAATGGTTCGGATAGAGAACAGAAGCAACCCTGGTAA

Protein sequence

>Msa0421220

MALCHPFLVSNNGPVNSLSSTFLRGTTPSSFSVNRKPKTCNLKNLSVSISCSSLKTVRDRTLDRHVVMRNRIRFVQKLKTLLLSKPKHFLPIKILSKCRAYLSLHKPRSLLSMIHRYPSIFELFTIPWPPTPLNATKLYPQLCVRLTPAAAALAVEELNLKSSISTVLANKLQKLLMLSPHRRLLLAKLVHLAPDLGLPPNFRSRLCNDHPDKFKIIDTSYGRALELVSCDTNLAKPLPPRESHSLDLIVDRPLKFKQLRLRKGLNLKRPHRDYLLKFEEVPEVCPYNNPAESLAKESIEAEKRCCAVIREVLGMTIEKRTLIDHLTHFRKEFGLPNKLRGMIVRHPELFYTSLKGQRDSVFLVERFDEKGNLLEKDEVLALQDKWMDLARESKRMRRERRKARIDKEFGRLSDVNQNPDDSDIDYDDDIEIDNFKDDYDDDIEIDNFKDDYDDGFEDVFEDLDFEAEDYDLGNDLFDNKIGEFWTAGPFPIQNGSDREQKQPW*