AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1234390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1234390 MtrunA17_Chr8g0345311 99.878 821 1 0 1 821 1 821 0.0 1675
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1234390 AT5G12370.1 81.005 816 136 5 18 820 12 821 0.0 1313
Msa1234390 AT5G12370.2 81.005 816 136 5 18 820 12 821 0.0 1313
Msa1234390 AT5G12370.3 80.392 816 136 6 18 820 12 816 0.0 1298

Find 220 sgRNAs with CRISPR-Local

Find 662 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGATGCGTTGTTCGGGAATT+TGG 0.126049 8_2:+11699051 Msa1234390:CDS
TTAATTTCTGCAGTACTTAA+TGG 0.176363 8_2:+11701284 Msa1234390:intron
TATTACCTGAGACAAAATTT+TGG 0.259562 8_2:-11702919 None:intergenic
TTCTCGTTCGATGCGTTGTT+CGG 0.268377 8_2:+11699043 Msa1234390:CDS
AGTTGCAGTTGCTAATTTAC+AGG 0.271879 8_2:+11701571 Msa1234390:CDS
AGCAGCGGAGGATGCGGATT+TGG 0.272779 8_2:-11698875 None:intergenic
TTGCGCATCTTTCCGAATGC+TGG 0.291509 8_2:-11708345 None:intergenic
TGATTGTTGCAGCCTCTTTA+CGG 0.294367 8_2:-11703588 None:intergenic
TATATTTACTCGGTCTAAAC+AGG 0.299125 8_2:-11709020 None:intergenic
GGAGATCTCTAGCAATTTCT+TGG 0.301544 8_2:-11703999 None:intergenic
GCCTAGATTTATTCAACTTC+GGG 0.314366 8_2:+11708641 Msa1234390:intron
GCAGCGAGTCACCGCCCTTC+TGG 0.324255 8_2:+11703777 Msa1234390:CDS
CAGCTAGAGAAAGGTGTAGA+TGG 0.326386 8_2:+11700910 Msa1234390:intron
GACAAAAGCTTCTCAACTTC+AGG 0.326594 8_2:-11699175 None:intergenic
GCAGAGGCCGCGGCTGCTGC+TGG 0.329546 8_2:+11705735 Msa1234390:CDS
ACAAGGGTTGCCAGTGTAGA+AGG 0.332707 8_2:-11705351 None:intergenic
TTGGGTTGCTTCTTCAACTT+TGG 0.333189 8_2:+11698580 None:intergenic
CATCCTTGTGACTTGAAAAC+AGG 0.334802 8_2:-11704665 None:intergenic
TCATTTGCTGAAGAAGATAT+TGG 0.334971 8_2:+11701488 Msa1234390:CDS
AGCCAGATTTCTGATTCATC+TGG 0.335866 8_2:+11704838 Msa1234390:CDS
GCGGACACCAGGCTGGTTCT+AGG 0.336230 8_2:+11703409 Msa1234390:CDS
AGCCCACGAGCAACATTATT+AGG 0.340459 8_2:-11703454 None:intergenic
GGCTTATCTTTCTCGGGTGC+TGG 0.343834 8_2:+11707051 Msa1234390:CDS
TCTCGTTCGATGCGTTGTTC+GGG 0.347784 8_2:+11699044 Msa1234390:CDS
TGGAGAATAGATTGCTTTCT+CGG 0.349635 8_2:+11702847 Msa1234390:CDS
AGAGATGCCTGCTCATATTC+AGG 0.349710 8_2:-11704693 None:intergenic
ACAAGCATTTCTGTCTGAAT+TGG 0.352400 8_2:+11707108 Msa1234390:CDS
GGGTTGTGGCTTATCTTTCT+CGG 0.358924 8_2:+11707044 Msa1234390:intron
TTTATTTGGGGATATGAAAC+TGG 0.363704 8_2:+11708778 Msa1234390:three_prime_UTR
TCTTTGCAATTCAGTTCAAC+AGG 0.365052 8_2:+11703320 Msa1234390:intron
GTTCTTTGATTGTATCGTTA+TGG 0.370656 8_2:-11698710 None:intergenic
ACACTGTTGTAATCCTTTGT+AGG 0.372676 8_2:-11706022 None:intergenic
TTCCCTCAAATTAGCAGCTT+CGG 0.376021 8_2:-11705552 None:intergenic
TCTTGTAAATTTACCTTCCA+TGG 0.376363 8_2:+11703822 Msa1234390:CDS
CGGTGCGGTGGTGGTGGTGG+TGG 0.378424 8_2:-11698797 None:intergenic
GCATTAGTTGGCCGGTGGTC+GGG 0.380439 8_2:-11706340 None:intergenic
TCTGCATTCACTGCTTTAGA+AGG 0.381680 8_2:+11707076 Msa1234390:CDS
AAGCGTGACATTACCGAGTA+TGG 0.382442 8_2:+11708112 Msa1234390:CDS
TCTGATTCATCTGGGACAAT+TGG 0.388160 8_2:+11704847 Msa1234390:CDS
TTTGTTCAAGGATTCTTGTA+AGG 0.398340 8_2:+11699198 Msa1234390:CDS
AATATAATTACTTTCACAAA+TGG 0.401495 8_2:-11708951 None:intergenic
CTCATAATCTCCACCAGATC+GGG 0.403138 8_2:+11698753 Msa1234390:five_prime_UTR
ACGCGGTGCGGTGGTGGTGG+TGG 0.404647 8_2:-11698800 None:intergenic
GGGAAATGCAACTGCGAGCC+GGG 0.404849 8_2:+11701541 Msa1234390:CDS
CAAAAGCCTAGATATAGAAT+TGG 0.406005 8_2:-11705926 None:intergenic
AAAATTGACATAACTTCGTT+GGG 0.407066 8_2:-11703628 None:intergenic
CATCAGCACCTTCCGCTTCA+AGG 0.409002 8_2:-11699108 None:intergenic
CATCCAAACTGAGTTCTTTG+TGG 0.409434 8_2:+11708688 Msa1234390:CDS
TAAAATTGACATAACTTCGT+TGG 0.411385 8_2:-11703629 None:intergenic
AGACCACAAAGAACTCAGTT+TGG 0.414387 8_2:-11708691 None:intergenic
TCTCGACATCGATGATTTCA+AGG 0.414959 8_2:+11698912 Msa1234390:CDS
AACCTGTGATTTCTTTGTAC+AGG 0.417363 8_2:-11703483 None:intergenic
CACCTTGTGCAGGCATTAGT+TGG 0.421090 8_2:-11706352 None:intergenic
TCCCAGATGAATCAGAAATC+TGG 0.424906 8_2:-11704840 None:intergenic
TGCGCATCTTTCCGAATGCT+GGG 0.425011 8_2:-11708344 None:intergenic
GGCATTAGTTGGCCGGTGGT+CGG 0.425834 8_2:-11706341 None:intergenic
TCGGGAGCCATTCCATCATC+AGG 0.427235 8_2:-11706322 None:intergenic
GACGGAACGCGGTGCGGTGG+TGG 0.427443 8_2:-11698806 None:intergenic
TTGTATCGTTATGGCGTGTT+TGG 0.435311 8_2:-11698701 None:intergenic
TTTGAGGGAAAGATTTGTGC+TGG 0.437594 8_2:+11705565 Msa1234390:CDS
GGTTGTGGCTTATCTTTCTC+GGG 0.442710 8_2:+11707045 Msa1234390:CDS
CCGATCTGGTGGAGATTATG+AGG 0.444714 8_2:-11698752 None:intergenic
TATCAGCTCAATAGTTTGAC+TGG 0.445366 8_2:-11701191 None:intergenic
GGAACGCGGTGCGGTGGTGG+TGG 0.446470 8_2:-11698803 None:intergenic
GTTTGAAAGCTTTGCGAGGT+TGG 0.449304 8_2:+11700936 Msa1234390:CDS
CTTGAACTGCTTCTCAAGCT+TGG 0.449410 8_2:+11708735 Msa1234390:three_prime_UTR
TGCTGCTGCTTGTGAAGAAA+TGG 0.450519 8_2:+11705969 Msa1234390:CDS
ATTGCTTGAGCTACGCAAAC+AGG 0.451671 8_2:+11699222 Msa1234390:CDS
ACGTCTTCAACACCACCAAA+TGG 0.451906 8_2:-11708815 None:intergenic
GAGTCTTTCAACTTTGTTTG+AGG 0.453466 8_2:+11708316 Msa1234390:CDS
TGCCTAGATTTATTCAACTT+CGG 0.454376 8_2:+11708640 Msa1234390:intron
TGGTGGTGTTGAAGACGTTT+TGG 0.457037 8_2:+11708820 Msa1234390:three_prime_UTR
ATGGTTGCTGTACAACGTTC+AGG 0.460896 8_2:+11705780 Msa1234390:CDS
ATATGAAACTGGCGCTCAAA+CGG 0.461467 8_2:+11708789 Msa1234390:three_prime_UTR
CAATGTCTTCATTGTTGCTC+CGG 0.462455 8_2:+11708292 Msa1234390:CDS
TTGAAAACAGGGACTCTGTC+AGG 0.463495 8_2:-11704653 None:intergenic
GAGATCTCTAGCAATTTCTT+GGG 0.466903 8_2:-11703998 None:intergenic
GGTCAGACAGCTGCAAAGAT+AGG 0.468831 8_2:+11700979 Msa1234390:CDS
TGACCGAAGCTGCTAATTTG+AGG 0.470299 8_2:+11705549 Msa1234390:CDS
CTTTGTGGTCTTAACAAAAG+TGG 0.470302 8_2:+11708703 Msa1234390:exon
GAAGGTAAATTTACAAGAGA+TGG 0.473391 8_2:-11703817 None:intergenic
GATTATAAATCCCCTGATGA+TGG 0.475182 8_2:+11706310 Msa1234390:CDS
ATTTACTTACTTGGTCTAGC+AGG 0.475682 8_2:-11705392 None:intergenic
GGGACAATTGGACGCTCAAA+GGG 0.479565 8_2:+11704859 Msa1234390:CDS
TTGAGGGTACACCCAGCATT+CGG 0.483355 8_2:+11708333 Msa1234390:CDS
GCTGCAGTATCTTCGCATGC+TGG 0.484675 8_2:+11703957 Msa1234390:intron
TGATATGCAGGCAGAGGCCG+CGG 0.485096 8_2:+11705725 Msa1234390:intron
AGTCTTTCAACTTTGTTTGA+GGG 0.486146 8_2:+11708317 Msa1234390:CDS
GAAAGCTCCATCAGGTCACC+AGG 0.489966 8_2:-11701321 None:intergenic
GTTGCATTTCCCACCGCTGA+TGG 0.490919 8_2:-11701530 None:intergenic
TATAGCTGAAGGTCTTGAAC+GGG 0.492792 8_2:+11705514 Msa1234390:CDS
GACATAACTTCGTTGGGTGA+AGG 0.494136 8_2:-11703622 None:intergenic
ACTCAGTTTGGATGCCAGCT+TGG 0.495845 8_2:-11708679 None:intergenic
TAGGACTACTTTGTGCAGCC+TGG 0.497139 8_2:-11703435 None:intergenic
GGTGGTGGTGGAGGTTGCGA+CGG 0.498133 8_2:-11698785 None:intergenic
GAAGGAAGCAGCGGAGGATG+CGG 0.499532 8_2:-11698881 None:intergenic
TAACTAATAGTTTGTCCAGA+AGG 0.500273 8_2:-11703792 None:intergenic
TGGGAAATGCAACTGCGAGC+CGG 0.502525 8_2:+11701540 Msa1234390:CDS
ATGGAATGGCTCCCGACCAC+CGG 0.502883 8_2:+11706329 Msa1234390:CDS
CGTCTTCAACACCACCAAAT+GGG 0.504042 8_2:-11708814 None:intergenic
AACAAAGTTGAAAGACTCTC+CGG 0.505806 8_2:-11708311 None:intergenic
TGGGACAATTGGACGCTCAA+AGG 0.511647 8_2:+11704858 Msa1234390:CDS
TTGTGCAGGCATTAGTTGGC+CGG 0.512518 8_2:-11706348 None:intergenic
TTCATATCCCCAAATAAAAG+AGG 0.512714 8_2:-11708773 None:intergenic
TTTGTGGTCTTAACAAAAGT+GGG 0.513737 8_2:+11708704 Msa1234390:exon
AAAGAGGAGAAAGCTCCATC+AGG 0.514653 8_2:-11701329 None:intergenic
AAGTGCCATGCAACATTATG+TGG 0.515645 8_2:+11703348 Msa1234390:CDS
GACCGAAGCTGCTAATTTGA+GGG 0.517004 8_2:+11705550 Msa1234390:CDS
TGCAGATGCTCAGCGAGAAA+CGG 0.519365 8_2:+11701168 Msa1234390:CDS
ACGTCCAATGTTTATTGATG+TGG 0.519877 8_2:+11703375 Msa1234390:CDS
TAGCAGCCCTGGTGACCTGA+TGG 0.522478 8_2:+11701314 Msa1234390:CDS
ACATAACTTCGTTGGGTGAA+GGG 0.523172 8_2:-11703621 None:intergenic
GGACTACAAGAGTGCCAAGC+TGG 0.525447 8_2:+11708665 Msa1234390:CDS
ATGGAGTTCAATAGCAGCCC+TGG 0.527765 8_2:+11701303 Msa1234390:CDS
ACCTGTGATTTCTTTGTACA+GGG 0.529358 8_2:-11703482 None:intergenic
AGCTAGAGAAAGGTGTAGAT+GGG 0.530266 8_2:+11700911 Msa1234390:intron
TGCAGATACTGTCCGTAAAG+AGG 0.531935 8_2:+11703576 Msa1234390:intron
AACTGTAGGATGTGGTGACT+TGG 0.533812 8_2:+11704023 Msa1234390:CDS
CCTCATAATCTCCACCAGAT+CGG 0.537415 8_2:+11698752 Msa1234390:five_prime_UTR
TGGGTACAAGTGTTAGCCGT+AGG 0.538929 8_2:+11705585 Msa1234390:CDS
AACTAATAGTTTGTCCAGAA+GGG 0.539419 8_2:-11703791 None:intergenic
AATTTACAGGAATACTGTAA+TGG 0.540802 8_2:+11701584 Msa1234390:CDS
ATGTGGTGACTTGGATGTTG+AGG 0.541509 8_2:+11704032 Msa1234390:CDS
GTAGGCAGCAGCCTCTGCAC+TGG 0.542317 8_2:-11706004 None:intergenic
CAGGCTGGTTCTAGGTGACC+AGG 0.542457 8_2:+11703417 Msa1234390:CDS
ACAAGGTTCTGCTAAACCAT+TGG 0.545268 8_2:+11707877 Msa1234390:CDS
TCTTATACACGTTGGAGTGA+AGG 0.545555 8_2:-11698619 None:intergenic
GCTTTCACCAGCAGCAGCCG+CGG 0.547349 8_2:-11705742 None:intergenic
TGAATATCCTGAATATGAGC+AGG 0.548573 8_2:+11704686 Msa1234390:CDS
AAGTAACGTCCACCTTGTGC+AGG 0.548777 8_2:-11706362 None:intergenic
TAGACAATTATATAAAGTGA+AGG 0.550063 8_2:+11704716 Msa1234390:CDS
TAAATCCCCTGATGATGGAA+TGG 0.550669 8_2:+11706315 Msa1234390:CDS
AAGTAATGAATGCGGACACC+AGG 0.550979 8_2:+11703398 Msa1234390:CDS
TAGGAGCCCACCTTCCTCCA+TGG 0.552048 8_2:-11703839 None:intergenic
GATTCACGTATATCAAGTGT+TGG 0.552442 8_2:+11700958 Msa1234390:CDS
ATTGCTTTCTGCTGAGCAGA+AGG 0.554493 8_2:+11706282 Msa1234390:CDS
CACGACGGAACGCGGTGCGG+TGG 0.554901 8_2:-11698809 None:intergenic
GCCAGATTTCTGATTCATCT+GGG 0.555340 8_2:+11704839 Msa1234390:CDS
TACCTTCCATGGAGGAAGGT+GGG 0.556270 8_2:+11703833 Msa1234390:CDS
CAGCTGCAGCAGCCACCCTA+CGG 0.557577 8_2:-11705601 None:intergenic
AAGTATAGATTATATTTACT+CGG 0.558589 8_2:-11709030 None:intergenic
GCTAGAGATCTCCGAACTGT+AGG 0.560698 8_2:+11704009 Msa1234390:CDS
TCATCGATGTCGAGAATGAG+AGG 0.561802 8_2:-11698904 None:intergenic
CGGAGCAACAATGAAGACAT+TGG 0.565132 8_2:-11708291 None:intergenic
CTGGTCACCTAGAACCAGCC+TGG 0.568405 8_2:-11703416 None:intergenic
ACTTCCACATCAATAAACAT+TGG 0.568426 8_2:-11703379 None:intergenic
GCAGAGGCTGCTGCCTACAA+AGG 0.569095 8_2:+11706009 Msa1234390:CDS
AATGAATGCGGACACCAGGC+TGG 0.570633 8_2:+11703402 Msa1234390:CDS
TTTGGCACATTCTGCCATTG+TGG 0.570870 8_2:-11702901 None:intergenic
AGTCACCACATCCTACAGTT+CGG 0.571064 8_2:-11704020 None:intergenic
TGTGGTGACTTGGATGTTGA+GGG 0.572093 8_2:+11704033 Msa1234390:CDS
TTGAGGGAAAGATTTGTGCT+GGG 0.572490 8_2:+11705566 Msa1234390:CDS
AGTCCTAATAATGTTGCTCG+TGG 0.576648 8_2:+11703451 Msa1234390:CDS
TTCTCAACTTCAGGAAACAA+AGG 0.579565 8_2:-11699166 None:intergenic
GCAGCATGTGCACCATCCAC+AGG 0.579600 8_2:-11705952 None:intergenic
GAGAGGGAAGGAAGCAGCGG+AGG 0.581601 8_2:-11698887 None:intergenic
AATTTACCTTCCATGGAGGA+AGG 0.581654 8_2:+11703829 Msa1234390:CDS
CTTTGCAATTCAGTTCAACA+GGG 0.582185 8_2:+11703321 Msa1234390:intron
GTTAGTCAATATATAGCTGA+AGG 0.582343 8_2:+11705503 Msa1234390:CDS
GATCTCCGAACTGTAGGATG+TGG 0.583156 8_2:+11704015 Msa1234390:CDS
AGGTCTTCTAATTTGAACGA+TGG 0.584353 8_2:-11699088 None:intergenic
GGGTACAAGTGTTAGCCGTA+GGG 0.584528 8_2:+11705586 Msa1234390:CDS
ATCTGAAGGCATGACTTGAA+AGG 0.585683 8_2:+11708866 Msa1234390:three_prime_UTR
ATATAGCTGAAGGTCTTGAA+CGG 0.587830 8_2:+11705513 Msa1234390:CDS
TATAACTGCACCATCAGCGG+TGG 0.589728 8_2:+11701520 Msa1234390:CDS
CAACTGCAACTTCTAATCCC+CGG 0.592935 8_2:-11701559 None:intergenic
TTACCTTCCATGGAGGAAGG+TGG 0.594101 8_2:+11703832 Msa1234390:CDS
CGGGAGCCATTCCATCATCA+GGG 0.594514 8_2:-11706321 None:intergenic
CTCTTACTGAACGTATCTGA+AGG 0.596969 8_2:+11708852 Msa1234390:three_prime_UTR
CTCAAACGGAACCCATTTGG+TGG 0.597031 8_2:+11708803 Msa1234390:three_prime_UTR
AGCCCACCTTCCTCCATGGA+AGG 0.599178 8_2:-11703835 None:intergenic
TGATGATAGCCGTGTTGCTG+AGG 0.600567 8_2:+11701356 Msa1234390:CDS
ACGCACAAACTCTCCATACT+CGG 0.602894 8_2:-11708125 None:intergenic
AACTTCAGGAAACAAAGGAC+TGG 0.603994 8_2:-11699161 None:intergenic
CTGTTCAAGACTCTAAGCAT+CGG 0.604463 8_2:+11700426 Msa1234390:CDS
TTACTCGGTCTAAACAGGGT+CGG 0.604623 8_2:-11709015 None:intergenic
TGCAGGCATTAGTTGGCCGG+TGG 0.606547 8_2:-11706345 None:intergenic
TTAGGGAAATCGCTTGCACA+AGG 0.607632 8_2:+11707860 Msa1234390:intron
GTCCTAATAATGTTGCTCGT+GGG 0.607795 8_2:+11703452 Msa1234390:CDS
TGCATTCCATAAATAAAACA+TGG 0.609682 8_2:-11709077 None:intergenic
ATCCTTGTGACTTGAAAACA+GGG 0.615448 8_2:-11704664 None:intergenic
AATGAGAGGGAAGGAAGCAG+CGG 0.618027 8_2:-11698890 None:intergenic
TACAGCAATGTCCAGTGCAG+AGG 0.619762 8_2:+11705993 Msa1234390:CDS
TGGTATAACTGCACCATCAG+CGG 0.620234 8_2:+11701517 Msa1234390:CDS
GGTCTTGAACGGGCTAGAGA+CGG 0.622203 8_2:+11705524 Msa1234390:CDS
CAAATTAGAAGACCTTGAAG+CGG 0.623512 8_2:+11699096 Msa1234390:CDS
GGAAATGCAACTGCGAGCCG+GGG 0.626908 8_2:+11701542 Msa1234390:CDS
TAGATTTATTCAACTTCGGG+AGG 0.627343 8_2:+11708644 Msa1234390:intron
ATATTTACTCGGTCTAAACA+GGG 0.633916 8_2:-11709019 None:intergenic
AAAGATAGGAGATCATCTCC+AGG 0.636715 8_2:+11700993 Msa1234390:CDS
TACAAGTGTTAGCCGTAGGG+TGG 0.637190 8_2:+11705589 Msa1234390:CDS
TCTCTCATCACGACGGAACG+CGG 0.639010 8_2:-11698817 None:intergenic
TTAGAAGACCTTGAAGCGGA+AGG 0.640761 8_2:+11699100 Msa1234390:CDS
TATACACGTTGGAGTGAAGG+AGG 0.641796 8_2:-11698616 None:intergenic
TGTTGCCACATAATGTTGCA+TGG 0.641848 8_2:-11703353 None:intergenic
GGCCAACTAATGCCTGCACA+AGG 0.644940 8_2:+11706350 Msa1234390:CDS
TTGAAGCAGCCTCAGCAACA+CGG 0.645175 8_2:-11701365 None:intergenic
TGTGATTTCTTTGTACAGGG+AGG 0.651555 8_2:-11703479 None:intergenic
CATCGATGTCGAGAATGAGA+GGG 0.653616 8_2:-11698903 None:intergenic
ATAACTGCACCATCAGCGGT+GGG 0.654091 8_2:+11701521 Msa1234390:CDS
GAAAAGAGAATTGACCACAA+TGG 0.656741 8_2:+11702887 Msa1234390:CDS
TATTGAAACTGTCATGGCTG+AGG 0.659500 8_2:+11706044 Msa1234390:CDS
GCATTCGGAAAGATGCGCAA+AGG 0.660387 8_2:+11708348 Msa1234390:CDS
TAATAGTTTGTCCAGAAGGG+CGG 0.661141 8_2:-11703788 None:intergenic
GAAGAAGATATTGGAAGACA+TGG 0.664292 8_2:+11701497 Msa1234390:CDS
CATCACGACGGAACGCGGTG+CGG 0.668021 8_2:-11698812 None:intergenic
GATGTCGAGAATGAGAGGGA+AGG 0.673517 8_2:-11698899 None:intergenic
TCCCTGTACAAAGAAATCAC+AGG 0.674837 8_2:+11703481 Msa1234390:CDS
TGTAGAAGAAATTACCTGTG+AGG 0.676230 8_2:-11704980 None:intergenic
GCATCGGAGGACACTAGCTG+AGG 0.679017 8_2:+11700442 Msa1234390:CDS
TTCAAGACTCTAAGCATCGG+AGG 0.680226 8_2:+11700429 Msa1234390:CDS
TTTGCAATTCAGTTCAACAG+GGG 0.681285 8_2:+11703322 Msa1234390:intron
ACAGTGTATTGAAACTGTCA+TGG 0.681812 8_2:+11706038 Msa1234390:CDS
GGGAGCCATTCCATCATCAG+GGG 0.688385 8_2:-11706320 None:intergenic
TGTAAATTTACCTTCCATGG+AGG 0.688790 8_2:+11703825 Msa1234390:CDS
GGTTGTTTGAAAGCTTTGCG+AGG 0.691348 8_2:+11700932 Msa1234390:CDS
TTGTAACAGAGTTTGTGCGT+TGG 0.693074 8_2:+11704923 Msa1234390:CDS
AAAGCTCCATCAGGTCACCA+GGG 0.716414 8_2:-11701320 None:intergenic
TCGAGGTTCTCTCATCACGA+CGG 0.734692 8_2:-11698824 None:intergenic
TGATGTGGAAGTAATGAATG+CGG 0.755616 8_2:+11703390 Msa1234390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATAAAATTATTTATTTT+TGG - chr8_2:11705114-11705133 None:intergenic 0.0%
!!! TTTAACTTTATTTTATCTTA+TGG + chr8_2:11700202-11700221 Msa1234390:intron 10.0%
!! ATTAATATTATATAGTTCAA+TGG + chr8_2:11704464-11704483 Msa1234390:intron 10.0%
!! ATTTATATATAAAAATACGT+GGG - chr8_2:11706211-11706230 None:intergenic 10.0%
!! AATTTATATATAAAAATACG+TGG - chr8_2:11706212-11706231 None:intergenic 10.0%
!!! CTTTTTAATTTTAATTATTC+TGG + chr8_2:11707229-11707248 Msa1234390:intron 10.0%
!! GAATTTAAAAACATTATAAT+TGG - chr8_2:11707519-11707538 None:intergenic 10.0%
!!! ATATTATTATTATTTCCTTT+TGG + chr8_2:11708418-11708437 Msa1234390:intron 10.0%
!!! TATTATTATTATTTCCTTTT+GGG + chr8_2:11708419-11708438 Msa1234390:intron 10.0%
!!! TAATGTTATTTTTGTGTTTT+TGG + chr8_2:11700359-11700378 Msa1234390:intron 15.0%
!! AGAAAAAAAAAAAAAACACT+TGG - chr8_2:11700511-11700530 None:intergenic 15.0%
!!! TTTGGTATTTTTGATTTTTA+CGG + chr8_2:11700645-11700664 Msa1234390:intron 15.0%
!!! CTATATTTCTTCATTTTTAA+AGG - chr8_2:11701646-11701665 None:intergenic 15.0%
!!! GTAATTTTATATTGTTATTC+TGG + chr8_2:11703737-11703756 Msa1234390:intron 15.0%
!!! TTTTTTTAATTTCTTAACAG+TGG + chr8_2:11704247-11704266 Msa1234390:intron 15.0%
!!! TTTTGATGAAGTATTTTTAA+TGG + chr8_2:11704422-11704441 Msa1234390:intron 15.0%
!!! TAAAACTTGTTTTTTTTTTG+AGG + chr8_2:11705299-11705318 Msa1234390:intron 15.0%
!!! AAAACTTGTTTTTTTTTTGA+GGG + chr8_2:11705300-11705319 Msa1234390:intron 15.0%
!!! TTTTCTTTTTCAAAAAAAGA+AGG + chr8_2:11706556-11706575 Msa1234390:intron 15.0%
!!! TTTAATTTTAATTATTCTGG+AGG + chr8_2:11707232-11707251 Msa1234390:intron 15.0%
!! AAAAATTTCTTAATAGTTCA+AGG - chr8_2:11707259-11707278 None:intergenic 15.0%
!!! ACTATAAACTATTTAGTTTA+GGG - chr8_2:11707290-11707309 None:intergenic 15.0%
!!! AACTATAAACTATTTAGTTT+AGG - chr8_2:11707291-11707310 None:intergenic 15.0%
!! ACAAATTATTTAAAAGTTCA+GGG - chr8_2:11707318-11707337 None:intergenic 15.0%
!! TACAAATTATTTAAAAGTTC+AGG - chr8_2:11707319-11707338 None:intergenic 15.0%
!! ACTAAATTATTTAAATGTTG+AGG + chr8_2:11707368-11707387 Msa1234390:intron 15.0%
!! CTAAATTATTTAAATGTTGA+GGG + chr8_2:11707369-11707388 Msa1234390:intron 15.0%
!!! ATTAAACACTTTTCATATTA+GGG + chr8_2:11707460-11707479 Msa1234390:intron 15.0%
!!! ATTATTATTATTTCCTTTTG+GGG + chr8_2:11708420-11708439 Msa1234390:intron 15.0%
!! AACATTCAATTATTTATTTG+AGG - chr8_2:11708580-11708599 None:intergenic 15.0%
!! AATATAATTACTTTCACAAA+TGG - chr8_2:11708954-11708973 None:intergenic 15.0%
!!! ATATTTGATTTGTTGATTTT+TGG + chr8_2:11708985-11709004 Msa1234390:three_prime_UTR 15.0%
!! AAGTATAGATTATATTTACT+CGG - chr8_2:11709033-11709052 None:intergenic 15.0%
!! AAATGTGATGAAATGAAATT+CGG + chr8_2:11699005-11699024 Msa1234390:intron 20.0%
!! TATTCTTACTAACTAACTAA+CGG + chr8_2:11699365-11699384 Msa1234390:intron 20.0%
!! TTATTGCTTATAAGTTCATA+TGG - chr8_2:11699533-11699552 None:intergenic 20.0%
!! ACTTATAAGCAATAAGTTAT+CGG + chr8_2:11699538-11699557 Msa1234390:intron 20.0%
!! AAATAGTAGTTTGATCAAAT+TGG + chr8_2:11699632-11699651 Msa1234390:intron 20.0%
!! AATAGTAGTTTGATCAAATT+GGG + chr8_2:11699633-11699652 Msa1234390:intron 20.0%
!!! TTTTTTTCAAGTAAGATTTC+AGG + chr8_2:11700032-11700051 Msa1234390:intron 20.0%
!!! TTTTTTCAAGTAAGATTTCA+GGG + chr8_2:11700033-11700052 Msa1234390:intron 20.0%
!! AATAAGTTGTTTATCCAAAA+AGG + chr8_2:11700283-11700302 Msa1234390:intron 20.0%
!! ATAAGTTGTTTATCCAAAAA+GGG + chr8_2:11700284-11700303 Msa1234390:intron 20.0%
!!! TTTTGTTTGTGTTGTTATAT+TGG + chr8_2:11700480-11700499 Msa1234390:intron 20.0%
!! TTCTAAATGTAATGAAGAAA+AGG + chr8_2:11700535-11700554 Msa1234390:intron 20.0%
!! TATTATGATGTTCTATTTGT+AGG + chr8_2:11701083-11701102 Msa1234390:intron 20.0%
!! AGATTATATTTAACACACAA+AGG - chr8_2:11701118-11701137 None:intergenic 20.0%
!!! AAATTTTCCAACATTAATGA+TGG - chr8_2:11701250-11701269 None:intergenic 20.0%
!! GATTTCAGTACTTATTAAAT+AGG + chr8_2:11701901-11701920 Msa1234390:intron 20.0%
!!! ATTAAATAGGTTTTTGCTAT+AGG + chr8_2:11701914-11701933 Msa1234390:intron 20.0%
!!! TTAAATAGGTTTTTGCTATA+GGG + chr8_2:11701915-11701934 Msa1234390:intron 20.0%
!! ATAATTAGATAACTTTGTCT+AGG + chr8_2:11702010-11702029 Msa1234390:intron 20.0%
!! AATAGAAAAAATACATCGAA+GGG - chr8_2:11702078-11702097 None:intergenic 20.0%
!!! GATGTATTTTTTCTATTGAA+AGG + chr8_2:11702081-11702100 Msa1234390:intron 20.0%
!!! AAAGGCAAATATCTAATTTT+GGG + chr8_2:11702099-11702118 Msa1234390:intron 20.0%
!! TGTCTAATACTTCTTATATA+TGG + chr8_2:11702140-11702159 Msa1234390:intron 20.0%
!! TATTGAGAAATTAAGTTATG+TGG + chr8_2:11702183-11702202 Msa1234390:intron 20.0%
!! ATAATTAGATAACTTTGTCT+AGG + chr8_2:11702010-11702029 Msa1234390:intron 20.0%
!! AATAGAAAAAATACATCGAA+TGG - chr8_2:11702078-11702097 None:intergenic 20.0%
!!! GATGTATTTTTTCTATTGAA+AGG + chr8_2:11702081-11702100 Msa1234390:intron 20.0%
!!! AAAGGCAAATATCTAATTTT+GGG + chr8_2:11702099-11702118 Msa1234390:intron 20.0%
!! TGTCTAATACTTCTTATATA+TGG + chr8_2:11702140-11702159 Msa1234390:intron 20.0%
!! TATTGAGAAATTAAGTTATG+TGG + chr8_2:11702183-11702202 Msa1234390:intron 20.0%
!! TAAAAAACTTAAACAAGCAA+TGG - chr8_2:11703009-11703028 None:intergenic 20.0%
!! GTTACATAAAATTATAATGC+AGG - chr8_2:11704280-11704299 None:intergenic 20.0%
!! AAAAGTTAAAAATTGCAATG+AGG - chr8_2:11704534-11704553 None:intergenic 20.0%
!! TAGACAATTATATAAAGTGA+AGG + chr8_2:11704716-11704735 Msa1234390:CDS 20.0%
!! AATTGTGAAATTTACTTACT+TGG - chr8_2:11705404-11705423 None:intergenic 20.0%
!!! ATATTTGATACTCTTTTTGT+GGG + chr8_2:11705437-11705456 Msa1234390:intron 20.0%
!!! TCATTCTTGATTTATTTTAC+AGG + chr8_2:11705481-11705500 Msa1234390:intron 20.0%
!!! TGCTTTTATTATTTTTTGCA+TGG - chr8_2:11706644-11706663 None:intergenic 20.0%
!! TAGTTCTTAACAACTATATT+CGG + chr8_2:11707009-11707028 Msa1234390:intron 20.0%
!! CTCTGATAATTGATTATATA+TGG + chr8_2:11707144-11707163 Msa1234390:intron 20.0%
!!! CTATTAAGAAATTTTTAGTC+AGG + chr8_2:11707263-11707282 Msa1234390:intron 20.0%
!!! ACATTAAATAGTTTGTCATT+AGG - chr8_2:11707430-11707449 None:intergenic 20.0%
!!! CATTAAACACTTTTCATATT+AGG + chr8_2:11707459-11707478 Msa1234390:intron 20.0%
!! AAATGCTGTATTATGTTATA+AGG - chr8_2:11707618-11707637 None:intergenic 20.0%
!!! CTTATGAAATATTTTGTAGT+GGG + chr8_2:11708077-11708096 Msa1234390:intron 20.0%
!!! TTATGAAATATTTTGTAGTG+GGG + chr8_2:11708078-11708097 Msa1234390:intron 20.0%
!! TATAATAATGATGAATACGT+TGG + chr8_2:11708371-11708390 Msa1234390:intron 20.0%
!!! TAACTTCCATGTTTTATTTA+TGG + chr8_2:11709071-11709090 Msa1234390:three_prime_UTR 20.0%
! ATGAAAAATCTTATACACGT+TGG - chr8_2:11698630-11698649 None:intergenic 25.0%
! AAATTGAAGAATTGAAAGTG+TGG - chr8_2:11698952-11698971 None:intergenic 25.0%
!! CAATTCTTCAATTTCGTTTT+TGG + chr8_2:11698958-11698977 Msa1234390:intron 25.0%
! AAATGAAATTCGGTTATGTT+AGG + chr8_2:11699015-11699034 Msa1234390:intron 25.0%
! AATGAAATTCGGTTATGTTA+GGG + chr8_2:11699016-11699035 Msa1234390:intron 25.0%
! TGAGAAAAATTGTTACCAAA+CGG + chr8_2:11699495-11699514 Msa1234390:intron 25.0%
!! TTTGACAATATTTTGTACTG+AGG + chr8_2:11699696-11699715 Msa1234390:intron 25.0%
!! TTGACAATATTTTGTACTGA+GGG + chr8_2:11699697-11699716 Msa1234390:intron 25.0%
! TAAGCTCTATAATATAGCTT+AGG + chr8_2:11699845-11699864 Msa1234390:intron 25.0%
!!! TATCCACTATTTTTGTCAAA+CGG - chr8_2:11699887-11699906 None:intergenic 25.0%
!!! TTTTTCAAGTAAGATTTCAG+GGG + chr8_2:11700034-11700053 Msa1234390:intron 25.0%
! AAAAAAGATAAGCTATAAGC+CGG + chr8_2:11700073-11700092 Msa1234390:intron 25.0%
!!! TTTTTGGAATGAAGATTGAT+GGG + chr8_2:11700375-11700394 Msa1234390:intron 25.0%
! AAAGTTTCCAAACATCATAA+GGG - chr8_2:11700577-11700596 None:intergenic 25.0%
!!! TGTTTTCCTTTGAAATACAT+TGG + chr8_2:11700596-11700615 Msa1234390:intron 25.0%
!! CAACAACTCTTTTCAATTAT+AGG - chr8_2:11700770-11700789 None:intergenic 25.0%
!!! AATCTTTGGGAATTTTGAAT+TGG + chr8_2:11700852-11700871 Msa1234390:intron 25.0%
! TGTTGGAAAATTTACCTTTA+TGG + chr8_2:11701257-11701276 Msa1234390:intron 25.0%
! CAGAAATTAATCAACCATAA+AGG - chr8_2:11701274-11701293 None:intergenic 25.0%
! TTAATTTCTGCAGTACTTAA+TGG + chr8_2:11701284-11701303 Msa1234390:intron 25.0%
!! TTAATGCTTACGCAATTTTT+GGG - chr8_2:11701394-11701413 None:intergenic 25.0%
! AATTTACAGGAATACTGTAA+TGG + chr8_2:11701584-11701603 Msa1234390:CDS 25.0%
! TCAAACAAACTGAATAATCA+AGG + chr8_2:11701694-11701713 Msa1234390:intron 25.0%
! CAAACAAACTGAATAATCAA+GGG + chr8_2:11701695-11701714 Msa1234390:intron 25.0%
! CAATAGAAAAAATACATCGA+AGG - chr8_2:11702079-11702098 None:intergenic 25.0%
!! GAAAGGCAAATATCTAATTT+TGG + chr8_2:11702098-11702117 Msa1234390:intron 25.0%
!! AAGGCAAATATCTAATTTTG+GGG + chr8_2:11702100-11702119 Msa1234390:intron 25.0%
!! GAAAGGCAAATATCTAATTT+TGG + chr8_2:11702098-11702117 Msa1234390:intron 25.0%
!! AAGGCAAATATCTAATTTTG+GGG + chr8_2:11702100-11702119 Msa1234390:intron 25.0%
! TTCTCAATATTCACTGTATT+AGG - chr8_2:11702511-11702530 None:intergenic 25.0%
! TTATGCTCTTAATAGTAAAG+AGG - chr8_2:11702681-11702700 None:intergenic 25.0%
!! AATGTTAAAATCTGCCTTTT+TGG + chr8_2:11702775-11702794 Msa1234390:intron 25.0%
!! TATTACCTGAGACAAAATTT+TGG - chr8_2:11702922-11702941 None:intergenic 25.0%
! GGAATTTAGTGTTCAATAAA+TGG + chr8_2:11703052-11703071 Msa1234390:intron 25.0%
! CAAATCATAAATCAAAGTCA+CGG - chr8_2:11703130-11703149 None:intergenic 25.0%
!! TTATGATTTGTACAATGTTG+TGG + chr8_2:11703140-11703159 Msa1234390:intron 25.0%
! AAAATTGACATAACTTCGTT+GGG - chr8_2:11703631-11703650 None:intergenic 25.0%
! TAAAATTGACATAACTTCGT+TGG - chr8_2:11703632-11703651 None:intergenic 25.0%
!!! AGTTATGTCAATTTTAGTTC+AGG + chr8_2:11703636-11703655 Msa1234390:CDS 25.0%
! TGTCATAAAATACGTCTAAT+GGG - chr8_2:11704164-11704183 None:intergenic 25.0%
! AGTTATATTGCAATTGTTGT+GGG + chr8_2:11704301-11704320 Msa1234390:intron 25.0%
!! ATATCAGTTTTTACAGTCAT+TGG - chr8_2:11704345-11704364 None:intergenic 25.0%
!!! AGTATTTTTAATGGTAAACG+TGG + chr8_2:11704431-11704450 Msa1234390:intron 25.0%
! ATCAGTGCATATTTATAAGA+TGG - chr8_2:11704591-11704610 None:intergenic 25.0%
!!! TTTTGAAACCAGATTCAATT+AGG - chr8_2:11704770-11704789 None:intergenic 25.0%
! TGGTTTCAAAAATCTTTACA+TGG + chr8_2:11704779-11704798 Msa1234390:intron 25.0%
! TTTCTTCTACAATTGGAAAT+TGG + chr8_2:11704992-11705011 Msa1234390:intron 25.0%
! TTGGAAATTGGAATTTGAAA+AGG + chr8_2:11705004-11705023 Msa1234390:intron 25.0%
!! AAAGACTGGTGAAATATTTT+TGG - chr8_2:11705166-11705185 None:intergenic 25.0%
! ATTCTTAACTACCAAAAAGT+TGG - chr8_2:11705216-11705235 None:intergenic 25.0%
! AATTATAGTTGCACTTACTA+AGG - chr8_2:11705279-11705298 None:intergenic 25.0%
!! GATATTTGATACTCTTTTTG+TGG + chr8_2:11705436-11705455 Msa1234390:intron 25.0%
! TCTGTGTAGTATGAAATTAA+AGG + chr8_2:11705669-11705688 Msa1234390:intron 25.0%
! AAAAAGTCATATCTGTTAAG+AGG - chr8_2:11705891-11705910 None:intergenic 25.0%
!! ACTTTTCCAATTCTATATCT+AGG + chr8_2:11705920-11705939 Msa1234390:CDS 25.0%
!! CATGATAGAAGTTTTACAAT+AGG - chr8_2:11706115-11706134 None:intergenic 25.0%
!!! ATGGCAGTATTTTAAAAACT+GGG + chr8_2:11706497-11706516 Msa1234390:intron 25.0%
! AAGAAGGAAAGATTCAAAAT+TGG + chr8_2:11706572-11706591 Msa1234390:intron 25.0%
! AGATTAATCTTATGCAACAT+AGG + chr8_2:11706881-11706900 Msa1234390:intron 25.0%
! TAATTGAGTCTCTAAATTCA+CGG - chr8_2:11707349-11707368 None:intergenic 25.0%
! ACATTATTTAGAAATTCCTG+TGG + chr8_2:11707402-11707421 Msa1234390:intron 25.0%
! CATTATTTAGAAATTCCTGT+GGG + chr8_2:11707403-11707422 Msa1234390:intron 25.0%
!! TATCAAACCAGCTTTATATA+AGG + chr8_2:11707584-11707603 Msa1234390:intron 25.0%
!!! CATAATACAGCATTTTGATT+AGG + chr8_2:11707623-11707642 Msa1234390:intron 25.0%
! AACCAGTAACAAAACTAATA+CGG - chr8_2:11707723-11707742 None:intergenic 25.0%
!!! GATGAATGTTGTGTTATTTT+CGG + chr8_2:11707794-11707813 Msa1234390:intron 25.0%
!!! ATAGTTGATTTGTCATCTTA+GGG + chr8_2:11707843-11707862 Msa1234390:intron 25.0%
! AAAAATACACTTTCAATCCA+AGG + chr8_2:11707901-11707920 Msa1234390:CDS 25.0%
!!! TTTTGTGTTGTAACTTGTAT+GGG + chr8_2:11708007-11708026 Msa1234390:intron 25.0%
!! GCTTATGAAATATTTTGTAG+TGG + chr8_2:11708076-11708095 Msa1234390:intron 25.0%
!! TATGAAATATTTTGTAGTGG+GGG + chr8_2:11708079-11708098 Msa1234390:intron 25.0%
! TGACGAAAAATTTGAATTGT+TGG + chr8_2:11708168-11708187 Msa1234390:CDS 25.0%
! GACGAAAAATTTGAATTGTT+GGG + chr8_2:11708169-11708188 Msa1234390:CDS 25.0%
! AGAAATCAGTTTGACAAAAT+TGG - chr8_2:11708250-11708269 None:intergenic 25.0%
! AATTTACCTAGTAAATGGTA+AGG - chr8_2:11708449-11708468 None:intergenic 25.0%
! CCAAAAATTTACCTAGTAAA+TGG - chr8_2:11708454-11708473 None:intergenic 25.0%
!! CCATTTACTAGGTAAATTTT+TGG + chr8_2:11708451-11708470 Msa1234390:intron 25.0%
! AATTCTTCACTGCAAAAAAA+AGG + chr8_2:11708549-11708568 Msa1234390:intron 25.0%
! ATTCTTCACTGCAAAAAAAA+GGG + chr8_2:11708550-11708569 Msa1234390:intron 25.0%
!! ACACATTTACCTCTTTTATT+TGG + chr8_2:11708764-11708783 Msa1234390:three_prime_UTR 25.0%
!!! CACATTTACCTCTTTTATTT+GGG + chr8_2:11708765-11708784 Msa1234390:three_prime_UTR 25.0%
!!! ACATTTACCTCTTTTATTTG+GGG + chr8_2:11708766-11708785 Msa1234390:three_prime_UTR 25.0%
! TTTCACAAATGGAAAAACTT+TGG - chr8_2:11708943-11708962 None:intergenic 25.0%
! TGCATTCCATAAATAAAACA+TGG - chr8_2:11709080-11709099 None:intergenic 25.0%
GTTCTTTGATTGTATCGTTA+TGG - chr8_2:11698713-11698732 None:intergenic 30.0%
TTTGTTCAAGGATTCTTGTA+AGG + chr8_2:11699198-11699217 Msa1234390:CDS 30.0%
GAGAAAAATTGTTACCAAAC+GGG + chr8_2:11699496-11699515 Msa1234390:intron 30.0%
AGAAAAATTGTTACCAAACG+GGG + chr8_2:11699497-11699516 Msa1234390:intron 30.0%
ATTGATATTGCATCAACCTA+AGG - chr8_2:11699596-11699615 None:intergenic 30.0%
TGATGCAATATCAATAATCG+CGG + chr8_2:11699601-11699620 Msa1234390:intron 30.0%
CCACTAGATAAACTCAAATA+AGG - chr8_2:11699736-11699755 None:intergenic 30.0%
! CCTTATTTGAGTTTATCTAG+TGG + chr8_2:11699733-11699752 Msa1234390:intron 30.0%
TTGTGACTGAAAACAACTTA+TGG + chr8_2:11699785-11699804 Msa1234390:intron 30.0%
!!! ATCCACTATTTTTGTCAAAC+GGG - chr8_2:11699886-11699905 None:intergenic 30.0%
!! AAGCTTGTTGATTGAATTTG+CGG + chr8_2:11699932-11699951 Msa1234390:intron 30.0%
!!! AGGTAACATTTTTTTCTCAC+CGG - chr8_2:11700095-11700114 None:intergenic 30.0%
TATGACAAAAAAGACTCGTT+AGG - chr8_2:11700115-11700134 None:intergenic 30.0%
AATAGCTTACGTATATCCTA+TGG - chr8_2:11700184-11700203 None:intergenic 30.0%
!!! GTTTTTGGAATGAAGATTGA+TGG + chr8_2:11700374-11700393 Msa1234390:intron 30.0%
AATGTTACCCTTATGATGTT+TGG + chr8_2:11700567-11700586 Msa1234390:intron 30.0%
CAAAGTTTCCAAACATCATA+AGG - chr8_2:11700578-11700597 None:intergenic 30.0%
ACTTAGCCAATGTATTTCAA+AGG - chr8_2:11700605-11700624 None:intergenic 30.0%
AGAATTCCTCTTTAAACGAA+TGG + chr8_2:11700792-11700811 Msa1234390:intron 30.0%
GAATTCCTCTTTAAACGAAT+GGG + chr8_2:11700793-11700812 Msa1234390:intron 30.0%
AATTCCTCTTTAAACGAATG+GGG + chr8_2:11700794-11700813 Msa1234390:intron 30.0%
TAAATACCAGCCAATTCATT+TGG + chr8_2:11701218-11701237 Msa1234390:intron 30.0%
AAATACCAGCCAATTCATTT+GGG + chr8_2:11701219-11701238 Msa1234390:intron 30.0%
ATGGTATAACCCAAATGAAT+TGG - chr8_2:11701231-11701250 None:intergenic 30.0%
GGTTATACCATCATTAATGT+TGG + chr8_2:11701240-11701259 Msa1234390:intron 30.0%
! CTTAATGCTTACGCAATTTT+TGG - chr8_2:11701395-11701414 None:intergenic 30.0%
GAGTCAATTCTGTTAATTTC+AGG + chr8_2:11701464-11701483 Msa1234390:intron 30.0%
! TCATTTGCTGAAGAAGATAT+TGG + chr8_2:11701488-11701507 Msa1234390:CDS 30.0%
ATGTTCATAACAGTTGTAAC+AGG - chr8_2:11701741-11701760 None:intergenic 30.0%
TGATCTATCAGTGATGATAA+CGG + chr8_2:11701879-11701898 Msa1234390:intron 30.0%
ATTAGATAACTTTGTCTAGG+TGG + chr8_2:11702013-11702032 Msa1234390:intron 30.0%
! TCATAGACAATTTTCCCTTA+AGG + chr8_2:11702040-11702059 Msa1234390:intron 30.0%
! AGGCAAATATCTAATTTTGG+GGG + chr8_2:11702101-11702120 Msa1234390:intron 30.0%
TTCTCAATACTCGTTGTATT+AGG - chr8_2:11702172-11702191 None:intergenic 30.0%
ACCTTCATAACAAAGAGATA+GGG - chr8_2:11702225-11702244 None:intergenic 30.0%
TACCTTCATAACAAAGAGAT+AGG - chr8_2:11702226-11702245 None:intergenic 30.0%
ATTAGATAACTTTGTCTAGG+TGG + chr8_2:11702013-11702032 Msa1234390:intron 30.0%
! TCATAGACAATTTTCCCTTA+AGG + chr8_2:11702040-11702059 Msa1234390:intron 30.0%
ATACATCGAATGGATAAATG+CGG - chr8_2:11702407-11702426 None:intergenic 30.0%
! AGGCAAATATCTAATTTTGG+GGG + chr8_2:11702101-11702120 Msa1234390:intron 30.0%
ACCTTCATATCAAAGAGATA+GGG - chr8_2:11702564-11702583 None:intergenic 30.0%
TACCTTCATATCAAAGAGAT+AGG - chr8_2:11702565-11702584 None:intergenic 30.0%
TTTACCTTTCCTTTATACCA+TGG + chr8_2:11702634-11702653 Msa1234390:intron 30.0%
TAACTGACCTTCTTACATAA+GGG + chr8_2:11702723-11702742 Msa1234390:intron 30.0%
GGGTAAGAACAAAATATTTG+TGG + chr8_2:11702743-11702762 Msa1234390:intron 30.0%
TATTGCTAGAGAAACCAAAA+AGG - chr8_2:11702792-11702811 None:intergenic 30.0%
GCAATGGACAAATATTGTTA+GGG - chr8_2:11702993-11703012 None:intergenic 30.0%
AGCAATGGACAAATATTGTT+AGG - chr8_2:11702994-11703013 None:intergenic 30.0%
ATTTGTACAATGTTGTGGTT+TGG + chr8_2:11703145-11703164 Msa1234390:intron 30.0%
ACTTCCACATCAATAAACAT+TGG - chr8_2:11703382-11703401 None:intergenic 30.0%
! AACTAATAGTTTGTCCAGAA+GGG - chr8_2:11703794-11703813 None:intergenic 30.0%
! TAACTAATAGTTTGTCCAGA+AGG - chr8_2:11703795-11703814 None:intergenic 30.0%
GAAGGTAAATTTACAAGAGA+TGG - chr8_2:11703820-11703839 None:intergenic 30.0%
TCTTGTAAATTTACCTTCCA+TGG + chr8_2:11703822-11703841 Msa1234390:CDS 30.0%
GGTTAATTATACTCACGAAT+AGG - chr8_2:11703861-11703880 None:intergenic 30.0%
ATCTCAATGTAAATTGCCTT+TGG + chr8_2:11703928-11703947 Msa1234390:intron 30.0%
!! TTTATTGACTCGTCTCTAAA+AGG + chr8_2:11704085-11704104 Msa1234390:intron 30.0%
CTGTCATAAAATACGTCTAA+TGG - chr8_2:11704165-11704184 None:intergenic 30.0%
GAGTTATATTGCAATTGTTG+TGG + chr8_2:11704300-11704319 Msa1234390:intron 30.0%
! TCATTGGTAACTAAAGAACA+AGG - chr8_2:11704329-11704348 None:intergenic 30.0%
! ATTTTTAATGGTAAACGTGG+AGG + chr8_2:11704434-11704453 Msa1234390:intron 30.0%
CATATTTATAAGATGGTCAG+AGG - chr8_2:11704584-11704603 None:intergenic 30.0%
CATTCTTGTATTACTCTTTG+CGG + chr8_2:11704624-11704643 Msa1234390:intron 30.0%
AAACCAGATTCAATTAGGAA+GGG - chr8_2:11704765-11704784 None:intergenic 30.0%
CAGGTAATTTCTTCTACAAT+TGG + chr8_2:11704985-11705004 Msa1234390:intron 30.0%
! TGTTGCTTGTAACTTCAATA+TGG + chr8_2:11705067-11705086 Msa1234390:intron 30.0%
!! AGTAAACACTGCTTTTACAA+GGG - chr8_2:11705370-11705389 None:intergenic 30.0%
!! AAGTAAACACTGCTTTTACA+AGG - chr8_2:11705371-11705390 None:intergenic 30.0%
GTTAGTCAATATATAGCTGA+AGG + chr8_2:11705503-11705522 Msa1234390:CDS 30.0%
!!! AAGCAGTTTTAGATCTTTCA+TGG + chr8_2:11705761-11705780 Msa1234390:CDS 30.0%
ATCATTCAACAAGTATGATG+AGG + chr8_2:11705816-11705835 Msa1234390:intron 30.0%
CAAAAGCCTAGATATAGAAT+TGG - chr8_2:11705929-11705948 None:intergenic 30.0%
!!! TCTTGATGCATATTTTGACA+TGG + chr8_2:11706478-11706497 Msa1234390:intron 30.0%
!! CATGGCAGTATTTTAAAAAC+TGG + chr8_2:11706496-11706515 Msa1234390:intron 30.0%
!! CAGTATTTTAAAAACTGGGT+TGG + chr8_2:11706501-11706520 Msa1234390:intron 30.0%
CATAAAATCTTTCCCTTTCT+TGG - chr8_2:11706535-11706554 None:intergenic 30.0%
TTCAAAATTGGAGAACAAAC+TGG + chr8_2:11706584-11706603 Msa1234390:intron 30.0%
TGCAAATTAATGACAAGTTC+AGG + chr8_2:11707490-11707509 Msa1234390:intron 30.0%
GCAAATTAATGACAAGTTCA+GGG + chr8_2:11707491-11707510 Msa1234390:intron 30.0%
!! AAGCTGGTTTGATAACTATT+TGG - chr8_2:11707578-11707597 None:intergenic 30.0%
TATTCAGTACAATCACTAGA+TGG - chr8_2:11707686-11707705 None:intergenic 30.0%
ATTGTACTGAATAATCATCG+TGG + chr8_2:11707693-11707712 Msa1234390:intron 30.0%
!!! TACCGTATTAGTTTTGTTAC+TGG + chr8_2:11707718-11707737 Msa1234390:intron 30.0%
!! CATAGTTGATTTGTCATCTT+AGG + chr8_2:11707842-11707861 Msa1234390:intron 30.0%
!! TGAAAGTGTATTTTTGCCAA+TGG - chr8_2:11707896-11707915 None:intergenic 30.0%
!! CTTTTGTGTTGTAACTTGTA+TGG + chr8_2:11708006-11708025 Msa1234390:intron 30.0%
GCACAACAATTGAAAAATCA+AGG - chr8_2:11708044-11708063 None:intergenic 30.0%
! TCAAATTTTTCGTCAACAGA+AGG - chr8_2:11708163-11708182 None:intergenic 30.0%
ATCAGTTTGACAAAATTGGT+AGG - chr8_2:11708246-11708265 None:intergenic 30.0%
! CTGAACATTTTTCTGTAGAT+TGG + chr8_2:11708268-11708287 Msa1234390:intron 30.0%
! AGTCTTTCAACTTTGTTTGA+GGG + chr8_2:11708317-11708336 Msa1234390:CDS 30.0%
GACTAATCCCCAAAAATAAT+AGG + chr8_2:11708485-11708504 Msa1234390:intron 30.0%
!! AAGGGTGACCTATTATTTTT+GGG - chr8_2:11708496-11708515 None:intergenic 30.0%
ACAGCCATAAAATTAGTGAA+GGG - chr8_2:11708514-11708533 None:intergenic 30.0%
TGCCTAGATTTATTCAACTT+CGG + chr8_2:11708640-11708659 Msa1234390:intron 30.0%
! TTTGTGGTCTTAACAAAAGT+GGG + chr8_2:11708704-11708723 Msa1234390:exon 30.0%
TTCATATCCCCAAATAAAAG+AGG - chr8_2:11708776-11708795 None:intergenic 30.0%
TTTATTTGGGGATATGAAAC+TGG + chr8_2:11708778-11708797 Msa1234390:three_prime_UTR 30.0%
ATATTTACTCGGTCTAAACA+GGG - chr8_2:11709022-11709041 None:intergenic 30.0%
TATATTTACTCGGTCTAAAC+AGG - chr8_2:11709023-11709042 None:intergenic 30.0%
! TGAAGAATTGAAAGTGTGGA+AGG - chr8_2:11698948-11698967 None:intergenic 35.0%
AGGTCTTCTAATTTGAACGA+TGG - chr8_2:11699091-11699110 None:intergenic 35.0%
CAAATTAGAAGACCTTGAAG+CGG + chr8_2:11699096-11699115 Msa1234390:CDS 35.0%
TTCTCAACTTCAGGAAACAA+AGG - chr8_2:11699169-11699188 None:intergenic 35.0%
! GAAGCTTTTGTCTTTGTTCA+AGG + chr8_2:11699186-11699205 Msa1234390:CDS 35.0%
!! AAGTTAGTTGATAGCATACG+AGG + chr8_2:11699327-11699346 Msa1234390:intron 35.0%
! TTGATAGCATACGAGGTTAT+AGG + chr8_2:11699334-11699353 Msa1234390:intron 35.0%
TGATAGCATACGAGGTTATA+GGG + chr8_2:11699335-11699354 Msa1234390:intron 35.0%
CTAGCTAATTCTACCAAACA+CGG - chr8_2:11699401-11699420 None:intergenic 35.0%
ATATGTTTGTGAGACTGTCT+GGG + chr8_2:11699757-11699776 Msa1234390:intron 35.0%
AGCTTAGGAAAACAGCTTAT+AGG + chr8_2:11699860-11699879 Msa1234390:intron 35.0%
! TCCACTATAAGCTAGCTTAT+CGG - chr8_2:11699911-11699930 None:intergenic 35.0%
TTGATTGAATTTGCGGTGTT+TGG + chr8_2:11699939-11699958 Msa1234390:intron 35.0%
TAAGCTATAAGCTCAAAAGC+TGG + chr8_2:11700143-11700162 Msa1234390:intron 35.0%
! GTATATCCTATGGCTCTATT+TGG - chr8_2:11700174-11700193 None:intergenic 35.0%
! TACACAATTTAGGCCCTTTT+TGG - chr8_2:11700300-11700319 None:intergenic 35.0%
CGTTCTACGATACACAATTT+AGG - chr8_2:11700310-11700329 None:intergenic 35.0%
!! TCCTTTTGAGTGATGCTTTT+TGG + chr8_2:11700627-11700646 Msa1234390:intron 35.0%
!! ACCAAAAAGCATCACTCAAA+AGG - chr8_2:11700631-11700650 None:intergenic 35.0%
CAAAAGGTGATCAAATTACG+AGG - chr8_2:11700718-11700737 None:intergenic 35.0%
ATATCACCACACTCTTCAAA+AGG - chr8_2:11700734-11700753 None:intergenic 35.0%
!! AGAGTGTGGTGATATTTTAG+AGG + chr8_2:11700739-11700758 Msa1234390:intron 35.0%
!! TGTGGTGATATTTTAGAGGA+TGG + chr8_2:11700743-11700762 Msa1234390:intron 35.0%
!! GTGGTGATATTTTAGAGGAT+GGG + chr8_2:11700744-11700763 Msa1234390:intron 35.0%
ATTCCTCTTTAAACGAATGG+GGG + chr8_2:11700795-11700814 Msa1234390:intron 35.0%
!! AAACTGCGCTGATTAATCTT+TGG + chr8_2:11700838-11700857 Msa1234390:intron 35.0%
!! AACTGCGCTGATTAATCTTT+GGG + chr8_2:11700839-11700858 Msa1234390:intron 35.0%
! TTTCCTTTTCAGCTAGAGAA+AGG + chr8_2:11700901-11700920 Msa1234390:intron 35.0%
GATTCACGTATATCAAGTGT+TGG + chr8_2:11700958-11700977 Msa1234390:CDS 35.0%
CTCCATCAAACACAGATTAA+GGG - chr8_2:11701039-11701058 None:intergenic 35.0%
TATCAGCTCAATAGTTTGAC+TGG - chr8_2:11701194-11701213 None:intergenic 35.0%
TATAACCCAAATGAATTGGC+TGG - chr8_2:11701227-11701246 None:intergenic 35.0%
! AGCTTTGACCAAATTATGTC+AGG + chr8_2:11701438-11701457 Msa1234390:intron 35.0%
GCTTTGACCAAATTATGTCA+GGG + chr8_2:11701439-11701458 Msa1234390:intron 35.0%
GAAGAAGATATTGGAAGACA+TGG + chr8_2:11701497-11701516 Msa1234390:CDS 35.0%
AGTTGCAGTTGCTAATTTAC+AGG + chr8_2:11701571-11701590 Msa1234390:CDS 35.0%
CTGAATAATCAAGGGAACAA+AGG + chr8_2:11701703-11701722 Msa1234390:intron 35.0%
CAAGAATTGCATGAATGACA+AGG + chr8_2:11701778-11701797 Msa1234390:intron 35.0%
!! CAAAGTTGATCAGCTTTTGA+AGG - chr8_2:11701835-11701854 None:intergenic 35.0%
AAAGCTGATCAACTTTGTCT+AGG + chr8_2:11701838-11701857 Msa1234390:intron 35.0%
! ACCCTATCTCTTTGTTATGA+AGG + chr8_2:11702221-11702240 Msa1234390:intron 35.0%
! AAACTATTGAGTTGTGCTCA+AGG - chr8_2:11702268-11702287 None:intergenic 35.0%
ACCCTATCTCTTTGATATGA+AGG + chr8_2:11702560-11702579 Msa1234390:intron 35.0%
! TAACTATTGAGTTGTGCTCA+AGG - chr8_2:11702607-11702626 None:intergenic 35.0%
GGAGTAAAAAAACTGACCAT+GGG - chr8_2:11702660-11702679 None:intergenic 35.0%
AGGAGTAAAAAAACTGACCA+TGG - chr8_2:11702661-11702680 None:intergenic 35.0%
AGAAGGTCAGTTACTTCAAA+AGG - chr8_2:11702716-11702735 None:intergenic 35.0%
GTAACTGACCTTCTTACATA+AGG + chr8_2:11702722-11702741 Msa1234390:intron 35.0%
GTTCTTACCCTTATGTAAGA+AGG - chr8_2:11702733-11702752 None:intergenic 35.0%
TGGAGAATAGATTGCTTTCT+CGG + chr8_2:11702847-11702866 Msa1234390:CDS 35.0%
GAAAAGAGAATTGACCACAA+TGG + chr8_2:11702887-11702906 Msa1234390:CDS 35.0%
! ATGTGCCAAAATTTTGTCTC+AGG + chr8_2:11702914-11702933 Msa1234390:CDS 35.0%
TGGACAAATATTGTTAGGGA+GGG - chr8_2:11702989-11703008 None:intergenic 35.0%
ATGGACAAATATTGTTAGGG+AGG - chr8_2:11702990-11703009 None:intergenic 35.0%
ATGAATTTGCCAATACTGCA+AGG + chr8_2:11703031-11703050 Msa1234390:intron 35.0%
CACTAAATTCCTTGCAGTAT+TGG - chr8_2:11703043-11703062 None:intergenic 35.0%
TCTTTGCAATTCAGTTCAAC+AGG + chr8_2:11703320-11703339 Msa1234390:intron 35.0%
CTTTGCAATTCAGTTCAACA+GGG + chr8_2:11703321-11703340 Msa1234390:intron 35.0%
TTTGCAATTCAGTTCAACAG+GGG + chr8_2:11703322-11703341 Msa1234390:intron 35.0%
ACGTCCAATGTTTATTGATG+TGG + chr8_2:11703375-11703394 Msa1234390:CDS 35.0%
TGATGTGGAAGTAATGAATG+CGG + chr8_2:11703390-11703409 Msa1234390:CDS 35.0%
ACCTGTGATTTCTTTGTACA+GGG - chr8_2:11703485-11703504 None:intergenic 35.0%
AACCTGTGATTTCTTTGTAC+AGG - chr8_2:11703486-11703505 None:intergenic 35.0%
TGTAAATTTACCTTCCATGG+AGG + chr8_2:11703825-11703844 Msa1234390:CDS 35.0%
CAAATGTCAGTTTAGACTGA+AGG + chr8_2:11703902-11703921 Msa1234390:intron 35.0%
!! TGTAAATTGCCTTTGGTTTG+AGG + chr8_2:11703935-11703954 Msa1234390:intron 35.0%
GAGATCTCTAGCAATTTCTT+GGG - chr8_2:11704001-11704020 None:intergenic 35.0%
GAGACGAGTCAATAAAAATC+AGG - chr8_2:11704081-11704100 None:intergenic 35.0%
! CTCGTCTCTAAAAGGAATAA+TGG + chr8_2:11704093-11704112 Msa1234390:intron 35.0%
!! GTTTTGAACACACATGCAAT+TGG + chr8_2:11704115-11704134 Msa1234390:intron 35.0%
TACTCGAGTATATGCAGAAA+AGG + chr8_2:11704185-11704204 Msa1234390:intron 35.0%
ATCCTTGTGACTTGAAAACA+GGG - chr8_2:11704667-11704686 None:intergenic 35.0%
TGAATATCCTGAATATGAGC+AGG + chr8_2:11704686-11704705 Msa1234390:CDS 35.0%
GAAACCAGATTCAATTAGGA+AGG - chr8_2:11704766-11704785 None:intergenic 35.0%
ATGGATAAATGCAATGCAGA+TGG + chr8_2:11704798-11704817 Msa1234390:intron 35.0%
!!! ATGCAATCTTTTTTCCTCAC+AGG + chr8_2:11704966-11704985 Msa1234390:CDS 35.0%
TGTAGAAGAAATTACCTGTG+AGG - chr8_2:11704983-11705002 None:intergenic 35.0%
!!! TATTTTTGGTCAAGTAGCCT+AGG - chr8_2:11705100-11705119 None:intergenic 35.0%
! TTTGATATTCCTACGCGTTT+TGG + chr8_2:11705183-11705202 Msa1234390:intron 35.0%
! TTGATATTCCTACGCGTTTT+GGG + chr8_2:11705184-11705203 Msa1234390:intron 35.0%
! TATTTTACAGCCTTCTACAC+TGG + chr8_2:11705341-11705360 Msa1234390:intron 35.0%
ATTTACTTACTTGGTCTAGC+AGG - chr8_2:11705395-11705414 None:intergenic 35.0%
ATATAGCTGAAGGTCTTGAA+CGG + chr8_2:11705513-11705532 Msa1234390:CDS 35.0%
! AGAGTTACTTGTTGATATGC+AGG + chr8_2:11705713-11705732 Msa1234390:intron 35.0%
ACACTGTTGTAATCCTTTGT+AGG - chr8_2:11706025-11706044 None:intergenic 35.0%
ACAGTGTATTGAAACTGTCA+TGG + chr8_2:11706038-11706057 Msa1234390:CDS 35.0%
TACAATAGGTAGTTGAACAC+TGG - chr8_2:11706101-11706120 None:intergenic 35.0%
TGCAATCTACTCACTACTAA+TGG + chr8_2:11706143-11706162 Msa1234390:intron 35.0%
AAGGTTGAGTGGAATACTTT+AGG - chr8_2:11706247-11706266 None:intergenic 35.0%
GATTATAAATCCCCTGATGA+TGG + chr8_2:11706310-11706329 Msa1234390:CDS 35.0%
! TTGGTCTTTGAACCAAGAAA+GGG + chr8_2:11706520-11706539 Msa1234390:intron 35.0%
TGTCTGAATCAGTAGAATCT+AGG + chr8_2:11706682-11706701 Msa1234390:intron 35.0%
ATGCTAAGAAATCAGTGAAC+TGG - chr8_2:11706736-11706755 None:intergenic 35.0%
!!! CACTGCTTTTAAAACTTAGC+GGG - chr8_2:11706814-11706833 None:intergenic 35.0%
!!! GCACTGCTTTTAAAACTTAG+CGG - chr8_2:11706815-11706834 None:intergenic 35.0%
TACAGATCTGAATGTTGTTC+AGG + chr8_2:11706853-11706872 Msa1234390:intron 35.0%
ACAGATCTGAATGTTGTTCA+GGG + chr8_2:11706854-11706873 Msa1234390:intron 35.0%
TTATGCAACATAGGTGACTT+GGG + chr8_2:11706890-11706909 Msa1234390:intron 35.0%
! TATATTCGGTTTTCCTTGTC+AGG + chr8_2:11707023-11707042 Msa1234390:intron 35.0%
! ATATTCGGTTTTCCTTGTCA+GGG + chr8_2:11707024-11707043 Msa1234390:intron 35.0%
ACAAGCATTTCTGTCTGAAT+TGG + chr8_2:11707108-11707127 Msa1234390:CDS 35.0%
CATTTCTGTCTGAATTGGTA+TGG + chr8_2:11707113-11707132 Msa1234390:intron 35.0%
ACTGCTTGTACCAAAACAAT+AGG + chr8_2:11707198-11707217 Msa1234390:intron 35.0%
! AGAACATCCACCTATTGTTT+TGG - chr8_2:11707211-11707230 None:intergenic 35.0%
AGCAGAACCTTATATAAAGC+TGG - chr8_2:11707594-11707613 None:intergenic 35.0%
TAAGTTTGCGACTAGAATCA+GGG - chr8_2:11707933-11707952 None:intergenic 35.0%
ATAAGTTTGCGACTAGAATC+AGG - chr8_2:11707934-11707953 None:intergenic 35.0%
AACACAAAAGAGAGAGATGA+GGG - chr8_2:11707996-11708015 None:intergenic 35.0%
TTGACAAAATTGGTAGGCAA+GGG - chr8_2:11708240-11708259 None:intergenic 35.0%
TTTGACAAAATTGGTAGGCA+AGG - chr8_2:11708241-11708260 None:intergenic 35.0%
AACAAAGTTGAAAGACTCTC+CGG - chr8_2:11708314-11708333 None:intergenic 35.0%
! GAGTCTTTCAACTTTGTTTG+AGG + chr8_2:11708316-11708335 Msa1234390:CDS 35.0%
!!! AGGGTGACCTATTATTTTTG+GGG - chr8_2:11708495-11708514 None:intergenic 35.0%
! GAAGGGTGACCTATTATTTT+TGG - chr8_2:11708497-11708516 None:intergenic 35.0%
! GTCACCCTTCACTAATTTTA+TGG + chr8_2:11708507-11708526 Msa1234390:intron 35.0%
GACAGCCATAAAATTAGTGA+AGG - chr8_2:11708515-11708534 None:intergenic 35.0%
! AATAAATCTAGGCATCGCAA+AGG - chr8_2:11708634-11708653 None:intergenic 35.0%
GCCTAGATTTATTCAACTTC+GGG + chr8_2:11708641-11708660 Msa1234390:intron 35.0%
TCCCGAAGTTGAATAAATCT+AGG - chr8_2:11708645-11708664 None:intergenic 35.0%
TAGATTTATTCAACTTCGGG+AGG + chr8_2:11708644-11708663 Msa1234390:intron 35.0%
! CTTTGTGGTCTTAACAAAAG+TGG + chr8_2:11708703-11708722 Msa1234390:exon 35.0%
TCTTATACACGTTGGAGTGA+AGG - chr8_2:11698622-11698641 None:intergenic 40.0%
TTGTATCGTTATGGCGTGTT+TGG - chr8_2:11698704-11698723 None:intergenic 40.0%
!!! GGATTTGGCTGTTTTGAGAT+CGG - chr8_2:11698863-11698882 None:intergenic 40.0%
TCTCGACATCGATGATTTCA+AGG + chr8_2:11698912-11698931 Msa1234390:CDS 40.0%
AACTTCAGGAAACAAAGGAC+TGG - chr8_2:11699164-11699183 None:intergenic 40.0%
GACAAAAGCTTCTCAACTTC+AGG - chr8_2:11699178-11699197 None:intergenic 40.0%
CATACGAGGTTATAGGGATA+AGG + chr8_2:11699341-11699360 Msa1234390:intron 40.0%
!! TATCGGCTCAGCTCAAAATT+TGG + chr8_2:11699555-11699574 Msa1234390:intron 40.0%
!! TTTTGTACTGAGGGCTTGTT+TGG + chr8_2:11699706-11699725 Msa1234390:intron 40.0%
CATATGTTTGTGAGACTGTC+TGG + chr8_2:11699756-11699775 Msa1234390:intron 40.0%
! ACCGATAAGCTAGCTTATAG+TGG + chr8_2:11699907-11699926 Msa1234390:intron 40.0%
CTGTTCAAGACTCTAAGCAT+CGG + chr8_2:11700426-11700445 Msa1234390:CDS 40.0%
!! TGATCACCTTTTGAAGAGTG+TGG + chr8_2:11700725-11700744 Msa1234390:intron 40.0%
ACACCTTTCTCTAGCTGAAA+AGG - chr8_2:11700907-11700926 None:intergenic 40.0%
! AGCTAGAGAAAGGTGTAGAT+GGG + chr8_2:11700911-11700930 Msa1234390:intron 40.0%
AAAGATAGGAGATCATCTCC+AGG + chr8_2:11700993-11701012 Msa1234390:CDS 40.0%
CATCAAACACAGATTAAGGG+TGG - chr8_2:11701036-11701055 None:intergenic 40.0%
CACCCTTAATCTGTGTTTGA+TGG + chr8_2:11701034-11701053 Msa1234390:intron 40.0%
CCTCCATCAAACACAGATTA+AGG - chr8_2:11701040-11701059 None:intergenic 40.0%
CCTTAATCTGTGTTTGATGG+AGG + chr8_2:11701037-11701056 Msa1234390:intron 40.0%
CGGCTATCATCAGAAAAAAG+AGG - chr8_2:11701348-11701367 None:intergenic 40.0%
ATACATCGAAGGGATAAACG+CGG - chr8_2:11702068-11702087 None:intergenic 40.0%
GTTCTGCAGAAATGGTGAAA+AGG - chr8_2:11702827-11702846 None:intergenic 40.0%
TTTCACCATTTCTGCAGAAC+TGG + chr8_2:11702827-11702846 Msa1234390:intron 40.0%
ATTCTCCAGTTCTGCAGAAA+TGG - chr8_2:11702835-11702854 None:intergenic 40.0%
TATTGTTAGGGAGGGAGTAA+GGG - chr8_2:11702981-11703000 None:intergenic 40.0%
ATATTGTTAGGGAGGGAGTA+AGG - chr8_2:11702982-11703001 None:intergenic 40.0%
TGCTCACTTGCTTATCGTAA+TGG + chr8_2:11703206-11703225 Msa1234390:intron 40.0%
AAGTGCCATGCAACATTATG+TGG + chr8_2:11703348-11703367 Msa1234390:CDS 40.0%
TGTTGCCACATAATGTTGCA+TGG - chr8_2:11703356-11703375 None:intergenic 40.0%
AGTCCTAATAATGTTGCTCG+TGG + chr8_2:11703451-11703470 Msa1234390:CDS 40.0%
GTCCTAATAATGTTGCTCGT+GGG + chr8_2:11703452-11703471 Msa1234390:CDS 40.0%
TGTGATTTCTTTGTACAGGG+AGG - chr8_2:11703482-11703501 None:intergenic 40.0%
TCCCTGTACAAAGAAATCAC+AGG + chr8_2:11703481-11703500 Msa1234390:CDS 40.0%
TTGCAAGAATCAGCAATGAC+AGG + chr8_2:11703545-11703564 Msa1234390:intron 40.0%
TGATTGTTGCAGCCTCTTTA+CGG - chr8_2:11703591-11703610 None:intergenic 40.0%
ACATAACTTCGTTGGGTGAA+GGG - chr8_2:11703624-11703643 None:intergenic 40.0%
!! TGAGTATCGTGGCTTTGAAT+AGG + chr8_2:11703679-11703698 Msa1234390:intron 40.0%
! TAATAGTTTGTCCAGAAGGG+CGG - chr8_2:11703791-11703810 None:intergenic 40.0%
AATTTACCTTCCATGGAGGA+AGG + chr8_2:11703829-11703848 Msa1234390:CDS 40.0%
GGAGATCTCTAGCAATTTCT+TGG - chr8_2:11704002-11704021 None:intergenic 40.0%
CACATGCAATTGGTACTAGA+AGG + chr8_2:11704125-11704144 Msa1234390:intron 40.0%
! ACGTCTAATGGGCAGATAAA+TGG - chr8_2:11704153-11704172 None:intergenic 40.0%
! GAGGCATGAATAGAGCTTTT+GGG - chr8_2:11704515-11704534 None:intergenic 40.0%
! TGAGGCATGAATAGAGCTTT+TGG - chr8_2:11704516-11704535 None:intergenic 40.0%
TGTATTACTCTTTGCGGATC+AGG + chr8_2:11704630-11704649 Msa1234390:intron 40.0%
CATCCTTGTGACTTGAAAAC+AGG - chr8_2:11704668-11704687 None:intergenic 40.0%
CAGATTCAATTAGGAAGGGA+GGG - chr8_2:11704761-11704780 None:intergenic 40.0%
AGCCAGATTTCTGATTCATC+TGG + chr8_2:11704838-11704857 Msa1234390:CDS 40.0%
GCCAGATTTCTGATTCATCT+GGG + chr8_2:11704839-11704858 Msa1234390:CDS 40.0%
TCCCAGATGAATCAGAAATC+TGG - chr8_2:11704843-11704862 None:intergenic 40.0%
! TCTGATTCATCTGGGACAAT+TGG + chr8_2:11704847-11704866 Msa1234390:CDS 40.0%
TTGTAACAGAGTTTGTGCGT+TGG + chr8_2:11704923-11704942 Msa1234390:CDS 40.0%
AAGCAACAACTATGATGCAG+AGG - chr8_2:11705055-11705074 None:intergenic 40.0%
TTCAATATGGACTTCTGCCT+AGG + chr8_2:11705080-11705099 Msa1234390:intron 40.0%
! TTGATACTCTTTTTGTGGGC+AGG + chr8_2:11705441-11705460 Msa1234390:intron 40.0%
TATAGCTGAAGGTCTTGAAC+GGG + chr8_2:11705514-11705533 Msa1234390:CDS 40.0%
TTCCCTCAAATTAGCAGCTT+CGG - chr8_2:11705555-11705574 None:intergenic 40.0%
TTTGAGGGAAAGATTTGTGC+TGG + chr8_2:11705565-11705584 Msa1234390:CDS 40.0%
TTGAGGGAAAGATTTGTGCT+GGG + chr8_2:11705566-11705585 Msa1234390:CDS 40.0%
TATTGAAACTGTCATGGCTG+AGG + chr8_2:11706044-11706063 Msa1234390:CDS 40.0%
! ATTCCACTCAACCTTTTTGC+AGG + chr8_2:11706252-11706271 Msa1234390:intron 40.0%
CAATCGTTCTACCTGCAAAA+AGG - chr8_2:11706266-11706285 None:intergenic 40.0%
!! TAAATCCCCTGATGATGGAA+TGG + chr8_2:11706315-11706334 Msa1234390:CDS 40.0%
!! GTTGGTCTTTGAACCAAGAA+AGG + chr8_2:11706519-11706538 Msa1234390:intron 40.0%
!!! CTTTTAAAACTTAGCGGGCA+AGG - chr8_2:11706809-11706828 None:intergenic 40.0%
CTTATGCAACATAGGTGACT+TGG + chr8_2:11706889-11706908 Msa1234390:intron 40.0%
TATGCAACATAGGTGACTTG+GGG + chr8_2:11706891-11706910 Msa1234390:intron 40.0%
! TCTGCATTCACTGCTTTAGA+AGG + chr8_2:11707076-11707095 Msa1234390:CDS 40.0%
GCTTGTACCAAAACAATAGG+TGG + chr8_2:11707201-11707220 Msa1234390:intron 40.0%
! TGGAAGTGTAAAACATGCAG+TGG - chr8_2:11707666-11707685 None:intergenic 40.0%
! GTAGATGCTACTTGTTGAGA+TGG + chr8_2:11707767-11707786 Msa1234390:intron 40.0%
ACAAGGTTCTGCTAAACCAT+TGG + chr8_2:11707877-11707896 Msa1234390:CDS 40.0%
TAGAATCAGGGGAAATACCT+TGG - chr8_2:11707921-11707940 None:intergenic 40.0%
AAGTTTGCGACTAGAATCAG+GGG - chr8_2:11707932-11707951 None:intergenic 40.0%
TCGCAAACTTATCTTCGTTG+AGG + chr8_2:11707942-11707961 Msa1234390:intron 40.0%
CGCAAACTTATCTTCGTTGA+GGG + chr8_2:11707943-11707962 Msa1234390:intron 40.0%
CAACACAAAAGAGAGAGATG+AGG - chr8_2:11707997-11708016 None:intergenic 40.0%
!! TTCAATTGTTGTGCTGACTG+TGG + chr8_2:11708050-11708069 Msa1234390:intron 40.0%
CAATGTCTTCATTGTTGCTC+CGG + chr8_2:11708292-11708311 Msa1234390:CDS 40.0%
! TACGTTGGTGCTCTTATTTG+TGG + chr8_2:11708386-11708405 Msa1234390:intron 40.0%
AATGGTAAGGAAACCCCAAA+AGG - chr8_2:11708436-11708455 None:intergenic 40.0%
GGGTTTCCTTACCATTTACT+AGG + chr8_2:11708440-11708459 Msa1234390:intron 40.0%
CATCCAAACTGAGTTCTTTG+TGG + chr8_2:11708688-11708707 Msa1234390:CDS 40.0%
AGACCACAAAGAACTCAGTT+TGG - chr8_2:11708694-11708713 None:intergenic 40.0%
ATATGAAACTGGCGCTCAAA+CGG + chr8_2:11708789-11708808 Msa1234390:three_prime_UTR 40.0%
CTCTTACTGAACGTATCTGA+AGG + chr8_2:11708852-11708871 Msa1234390:three_prime_UTR 40.0%
! ATCTGAAGGCATGACTTGAA+AGG + chr8_2:11708866-11708885 Msa1234390:three_prime_UTR 40.0%
TATACACGTTGGAGTGAAGG+AGG - chr8_2:11698619-11698638 None:intergenic 45.0%
CCTCATAATCTCCACCAGAT+CGG + chr8_2:11698752-11698771 Msa1234390:five_prime_UTR 45.0%
CTCATAATCTCCACCAGATC+GGG + chr8_2:11698753-11698772 Msa1234390:five_prime_UTR 45.0%
!!! GGCTGTTTTGAGATCGGTTT+TGG - chr8_2:11698857-11698876 None:intergenic 45.0%
CATCGATGTCGAGAATGAGA+GGG - chr8_2:11698906-11698925 None:intergenic 45.0%
TCATCGATGTCGAGAATGAG+AGG - chr8_2:11698907-11698926 None:intergenic 45.0%
TTCTCGTTCGATGCGTTGTT+CGG + chr8_2:11699043-11699062 Msa1234390:CDS 45.0%
TTAGAAGACCTTGAAGCGGA+AGG + chr8_2:11699100-11699119 Msa1234390:CDS 45.0%
ATTGCTTGAGCTACGCAAAC+AGG + chr8_2:11699222-11699241 Msa1234390:CDS 45.0%
CGGATTGCATTTACCGTGTT+TGG + chr8_2:11699385-11699404 Msa1234390:intron 45.0%
CATCAACCTAAGGCTCTACT+TGG - chr8_2:11699586-11699605 None:intergenic 45.0%
GGCCCGTTTGACAAAAATAG+TGG + chr8_2:11699881-11699900 Msa1234390:intron 45.0%
! GCGGTGTTTGGTAACATTAG+CGG + chr8_2:11699951-11699970 Msa1234390:intron 45.0%
GCATTGCCAAATAGAGCCAT+AGG + chr8_2:11700165-11700184 Msa1234390:intron 45.0%
!! TTCAAGACTCTAAGCATCGG+AGG + chr8_2:11700429-11700448 Msa1234390:CDS 45.0%
AGACCCCCATTCGTTTAAAG+AGG - chr8_2:11700801-11700820 None:intergenic 45.0%
! CAGCTAGAGAAAGGTGTAGA+TGG + chr8_2:11700910-11700929 Msa1234390:intron 45.0%
GGTTGTTTGAAAGCTTTGCG+AGG + chr8_2:11700932-11700951 Msa1234390:CDS 45.0%
GTTTGAAAGCTTTGCGAGGT+TGG + chr8_2:11700936-11700955 Msa1234390:CDS 45.0%
ATAGGAGATCATCTCCAGGT+AGG + chr8_2:11700997-11701016 Msa1234390:intron 45.0%
TAGGAGATCATCTCCAGGTA+GGG + chr8_2:11700998-11701017 Msa1234390:intron 45.0%
TCTGTGTTTGATGGAGGAAC+TGG + chr8_2:11701043-11701062 Msa1234390:intron 45.0%
CTGTGTTTGATGGAGGAACT+GGG + chr8_2:11701044-11701063 Msa1234390:intron 45.0%
AAAGAGGAGAAAGCTCCATC+AGG - chr8_2:11701332-11701351 None:intergenic 45.0%
GACTCAGCCCTGACATAATT+TGG - chr8_2:11701449-11701468 None:intergenic 45.0%
TGGTATAACTGCACCATCAG+CGG + chr8_2:11701517-11701536 Msa1234390:CDS 45.0%
CAACTGCAACTTCTAATCCC+CGG - chr8_2:11701562-11701581 None:intergenic 45.0%
GCTGATCAACTTTGTCTAGG+TGG + chr8_2:11701841-11701860 Msa1234390:intron 45.0%
GGATAAATGCGGCTCCTTAA+GGG - chr8_2:11702396-11702415 None:intergenic 45.0%
TGGATAAATGCGGCTCCTTA+AGG - chr8_2:11702397-11702416 None:intergenic 45.0%
TGGGCCATGGTATAAAGGAA+AGG - chr8_2:11702641-11702660 None:intergenic 45.0%
TTCCTTTATACCATGGCCCA+TGG + chr8_2:11702641-11702660 Msa1234390:intron 45.0%
AAAAAACTGACCATGGGCCA+TGG - chr8_2:11702654-11702673 None:intergenic 45.0%
TTTGGCACATTCTGCCATTG+TGG - chr8_2:11702904-11702923 None:intergenic 45.0%
ATTGTTAGGGAGGGAGTAAG+GGG - chr8_2:11702980-11702999 None:intergenic 45.0%
AAGTAATGAATGCGGACACC+AGG + chr8_2:11703398-11703417 Msa1234390:CDS 45.0%
AGCCCACGAGCAACATTATT+AGG - chr8_2:11703457-11703476 None:intergenic 45.0%
TGCAGATACTGTCCGTAAAG+AGG + chr8_2:11703576-11703595 Msa1234390:intron 45.0%
GACATAACTTCGTTGGGTGA+AGG - chr8_2:11703625-11703644 None:intergenic 45.0%
! ATGATCCTCACTGAGTATCG+TGG + chr8_2:11703668-11703687 Msa1234390:intron 45.0%
ATACTGCAGCCTCAAACCAA+AGG - chr8_2:11703947-11703966 None:intergenic 45.0%
AGTCACCACATCCTACAGTT+CGG - chr8_2:11704023-11704042 None:intergenic 45.0%
AACTGTAGGATGTGGTGACT+TGG + chr8_2:11704023-11704042 Msa1234390:CDS 45.0%
! ATGTGGTGACTTGGATGTTG+AGG + chr8_2:11704032-11704051 Msa1234390:CDS 45.0%
! TGTGGTGACTTGGATGTTGA+GGG + chr8_2:11704033-11704052 Msa1234390:CDS 45.0%
!! CATACCTAACTTGCTTGCTC+TGG + chr8_2:11704384-11704403 Msa1234390:intron 45.0%
ATTGCCAGAGCAAGCAAGTT+AGG - chr8_2:11704391-11704410 None:intergenic 45.0%
TTGAAAACAGGGACTCTGTC+AGG - chr8_2:11704656-11704675 None:intergenic 45.0%
!!! GTCCCTGTTTTCAAGTCACA+AGG + chr8_2:11704662-11704681 Msa1234390:CDS 45.0%
AGAGATGCCTGCTCATATTC+AGG - chr8_2:11704696-11704715 None:intergenic 45.0%
CCAGATTCAATTAGGAAGGG+AGG - chr8_2:11704762-11704781 None:intergenic 45.0%
CCTCCCTTCCTAATTGAATC+TGG + chr8_2:11704759-11704778 Msa1234390:intron 45.0%
CGCGTAGGAATATCAAAGAC+TGG - chr8_2:11705180-11705199 None:intergenic 45.0%
! TTGGGCACTTGCCAACTTTT+TGG + chr8_2:11705202-11705221 Msa1234390:intron 45.0%
TGACCGAAGCTGCTAATTTG+AGG + chr8_2:11705549-11705568 Msa1234390:CDS 45.0%
GACCGAAGCTGCTAATTTGA+GGG + chr8_2:11705550-11705569 Msa1234390:CDS 45.0%
! ACTTGTTGATATGCAGGCAG+AGG + chr8_2:11705719-11705738 Msa1234390:intron 45.0%
ATGGTTGCTGTACAACGTTC+AGG + chr8_2:11705780-11705799 Msa1234390:CDS 45.0%
! ATCTAGGCTTTTGCTTCCTG+TGG + chr8_2:11705936-11705955 Msa1234390:CDS 45.0%
! TGCTGCTGCTTGTGAAGAAA+TGG + chr8_2:11705969-11705988 Msa1234390:CDS 45.0%
GGTCAGTTGGGTCTGTAATA+TGG + chr8_2:11706065-11706084 Msa1234390:intron 45.0%
CTACCTGCAAAAAGGTTGAG+TGG - chr8_2:11706258-11706277 None:intergenic 45.0%
ATTGCTTTCTGCTGAGCAGA+AGG + chr8_2:11706282-11706301 Msa1234390:CDS 45.0%
! ATGCAACATAGGTGACTTGG+GGG + chr8_2:11706892-11706911 Msa1234390:intron 45.0%
GGGTTGTGGCTTATCTTTCT+CGG + chr8_2:11707044-11707063 Msa1234390:intron 45.0%
GGTTGTGGCTTATCTTTCTC+GGG + chr8_2:11707045-11707064 Msa1234390:CDS 45.0%
AGTTTGTCATTAGGTCCCAC+AGG - chr8_2:11707421-11707440 None:intergenic 45.0%
TTAGGGAAATCGCTTGCACA+AGG + chr8_2:11707860-11707879 Msa1234390:intron 45.0%
AAGCGTGACATTACCGAGTA+TGG + chr8_2:11708112-11708131 Msa1234390:CDS 45.0%
ACGCACAAACTCTCCATACT+CGG - chr8_2:11708128-11708147 None:intergenic 45.0%
CGGAGCAACAATGAAGACAT+TGG - chr8_2:11708294-11708313 None:intergenic 45.0%
! ATCTAGGCATCGCAAAGGAA+TGG - chr8_2:11708629-11708648 None:intergenic 45.0%
CTTGAACTGCTTCTCAAGCT+TGG + chr8_2:11708735-11708754 Msa1234390:three_prime_UTR 45.0%
CGTCTTCAACACCACCAAAT+GGG - chr8_2:11708817-11708836 None:intergenic 45.0%
ACGTCTTCAACACCACCAAA+TGG - chr8_2:11708818-11708837 None:intergenic 45.0%
!! TGGTGGTGTTGAAGACGTTT+TGG + chr8_2:11708820-11708839 Msa1234390:three_prime_UTR 45.0%
TTACTCGGTCTAAACAGGGT+CGG - chr8_2:11709018-11709037 None:intergenic 45.0%
!! TTTATTTATATTTATACTTA+TGG - chr8_2:11705867-11705886 None:intergenic 5.0%
!!! TTTTAAATAATTTGTATTTA+CGG + chr8_2:11707323-11707342 Msa1234390:intron 5.0%
CCGATCTGGTGGAGATTATG+AGG - chr8_2:11698755-11698774 None:intergenic 50.0%
!!! GTGTTGTTTTCCCGATCTGG+TGG - chr8_2:11698766-11698785 None:intergenic 50.0%
!!! ACGGTGTTGTTTTCCCGATC+TGG - chr8_2:11698769-11698788 None:intergenic 50.0%
TCGAGGTTCTCTCATCACGA+CGG - chr8_2:11698827-11698846 None:intergenic 50.0%
!!! TCGGTTTTGGTTGCATCTCG+AGG - chr8_2:11698844-11698863 None:intergenic 50.0%
AATGAGAGGGAAGGAAGCAG+CGG - chr8_2:11698893-11698912 None:intergenic 50.0%
GATGTCGAGAATGAGAGGGA+AGG - chr8_2:11698902-11698921 None:intergenic 50.0%
TCTCGTTCGATGCGTTGTTC+GGG + chr8_2:11699044-11699063 Msa1234390:CDS 50.0%
CGATGCGTTGTTCGGGAATT+TGG + chr8_2:11699051-11699070 Msa1234390:CDS 50.0%
TGGCACAAATAGACCCCGTT+TGG - chr8_2:11699513-11699532 None:intergenic 50.0%
GCATTGCCAAGTAGAGCCTT+AGG + chr8_2:11699577-11699596 Msa1234390:intron 50.0%
GGTCAGACAGCTGCAAAGAT+AGG + chr8_2:11700979-11700998 Msa1234390:CDS 50.0%
TGCAGATGCTCAGCGAGAAA+CGG + chr8_2:11701168-11701187 Msa1234390:CDS 50.0%
ATGGAGTTCAATAGCAGCCC+TGG + chr8_2:11701303-11701322 Msa1234390:CDS 50.0%
AAAGCTCCATCAGGTCACCA+GGG - chr8_2:11701323-11701342 None:intergenic 50.0%
! TGATGATAGCCGTGTTGCTG+AGG + chr8_2:11701356-11701375 Msa1234390:CDS 50.0%
TTGAAGCAGCCTCAGCAACA+CGG - chr8_2:11701368-11701387 None:intergenic 50.0%
TATAACTGCACCATCAGCGG+TGG + chr8_2:11701520-11701539 Msa1234390:CDS 50.0%
ATAACTGCACCATCAGCGGT+GGG + chr8_2:11701521-11701540 Msa1234390:CDS 50.0%
GGATAAACGCGGCTCCTTAA+GGG - chr8_2:11702057-11702076 None:intergenic 50.0%
GACCATGGGCCATGGTATAA+AGG - chr8_2:11702646-11702665 None:intergenic 50.0%
TTGTTAGGGAGGGAGTAAGG+GGG - chr8_2:11702979-11702998 None:intergenic 50.0%
!! ACTGCAAGCACTGGAAGCAA+AGG - chr8_2:11703180-11703199 None:intergenic 50.0%
GCAGCATATACTGCAAGCAC+TGG - chr8_2:11703189-11703208 None:intergenic 50.0%
TAGGACTACTTTGTGCAGCC+TGG - chr8_2:11703438-11703457 None:intergenic 50.0%
CAAAGCCACGATACTCAGTG+AGG - chr8_2:11703676-11703695 None:intergenic 50.0%
TTACCTTCCATGGAGGAAGG+TGG + chr8_2:11703832-11703851 Msa1234390:CDS 50.0%
TACCTTCCATGGAGGAAGGT+GGG + chr8_2:11703833-11703852 Msa1234390:CDS 50.0%
GCTAGAGATCTCCGAACTGT+AGG + chr8_2:11704009-11704028 Msa1234390:CDS 50.0%
GATCTCCGAACTGTAGGATG+TGG + chr8_2:11704015-11704034 Msa1234390:CDS 50.0%
TGGGACAATTGGACGCTCAA+AGG + chr8_2:11704858-11704877 Msa1234390:CDS 50.0%
GGGACAATTGGACGCTCAAA+GGG + chr8_2:11704859-11704878 Msa1234390:CDS 50.0%
ACAAGGGTTGCCAGTGTAGA+AGG - chr8_2:11705354-11705373 None:intergenic 50.0%
TGGGTACAAGTGTTAGCCGT+AGG + chr8_2:11705585-11705604 Msa1234390:CDS 50.0%
GGGTACAAGTGTTAGCCGTA+GGG + chr8_2:11705586-11705605 Msa1234390:CDS 50.0%
TACAAGTGTTAGCCGTAGGG+TGG + chr8_2:11705589-11705608 Msa1234390:CDS 50.0%
! AGGCTTTTGCTTCCTGTGGA+TGG + chr8_2:11705940-11705959 Msa1234390:CDS 50.0%
TACAGCAATGTCCAGTGCAG+AGG + chr8_2:11705993-11706012 Msa1234390:CDS 50.0%
TGTCATGGCTGAGGTCAGTT+GGG + chr8_2:11706053-11706072 Msa1234390:intron 50.0%
TTGTGCAGGCATTAGTTGGC+CGG - chr8_2:11706351-11706370 None:intergenic 50.0%
CACCTTGTGCAGGCATTAGT+TGG - chr8_2:11706355-11706374 None:intergenic 50.0%
CAACTAATGCCTGCACAAGG+TGG + chr8_2:11706353-11706372 Msa1234390:intron 50.0%
AAGTAACGTCCACCTTGTGC+AGG - chr8_2:11706365-11706384 None:intergenic 50.0%
! GGTTTTCCTTGTCAGGGTTG+TGG + chr8_2:11707030-11707049 Msa1234390:intron 50.0%
GATAAGCCACAACCCTGACA+AGG - chr8_2:11707039-11707058 None:intergenic 50.0%
! TTGAGGGTACACCCAGCATT+CGG + chr8_2:11708333-11708352 Msa1234390:CDS 50.0%
TGCGCATCTTTCCGAATGCT+GGG - chr8_2:11708347-11708366 None:intergenic 50.0%
TTGCGCATCTTTCCGAATGC+TGG - chr8_2:11708348-11708367 None:intergenic 50.0%
GCATTCGGAAAGATGCGCAA+AGG + chr8_2:11708348-11708367 Msa1234390:CDS 50.0%
ACTCAGTTTGGATGCCAGCT+TGG - chr8_2:11708682-11708701 None:intergenic 50.0%
CTCAAACGGAACCCATTTGG+TGG + chr8_2:11708803-11708822 Msa1234390:three_prime_UTR 50.0%
TCTCTCATCACGACGGAACG+CGG - chr8_2:11698820-11698839 None:intergenic 55.0%
CATCAGCACCTTCCGCTTCA+AGG - chr8_2:11699111-11699130 None:intergenic 55.0%
GAAGAACTCTGCTCCCTACC+TGG - chr8_2:11701014-11701033 None:intergenic 55.0%
GAAAGCTCCATCAGGTCACC+AGG - chr8_2:11701324-11701343 None:intergenic 55.0%
GTTGCATTTCCCACCGCTGA+TGG - chr8_2:11701533-11701552 None:intergenic 55.0%
TGGGAAATGCAACTGCGAGC+CGG + chr8_2:11701540-11701559 Msa1234390:CDS 55.0%
GGGATAAACGCGGCTCCTTA+AGG - chr8_2:11702058-11702077 None:intergenic 55.0%
AATGAATGCGGACACCAGGC+TGG + chr8_2:11703402-11703421 Msa1234390:CDS 55.0%
GCTGCAGTATCTTCGCATGC+TGG + chr8_2:11703957-11703976 Msa1234390:intron 55.0%
TGGGCAGGAGCTCATTCTTC+TGG + chr8_2:11705456-11705475 Msa1234390:intron 55.0%
!! GGTCTTGAACGGGCTAGAGA+CGG + chr8_2:11705524-11705543 Msa1234390:CDS 55.0%
CTGTCATGGCTGAGGTCAGT+TGG + chr8_2:11706052-11706071 Msa1234390:intron 55.0%
GGGAGCCATTCCATCATCAG+GGG - chr8_2:11706323-11706342 None:intergenic 55.0%
CGGGAGCCATTCCATCATCA+GGG - chr8_2:11706324-11706343 None:intergenic 55.0%
TCGGGAGCCATTCCATCATC+AGG - chr8_2:11706325-11706344 None:intergenic 55.0%
GGCCAACTAATGCCTGCACA+AGG + chr8_2:11706350-11706369 Msa1234390:CDS 55.0%
! CTTAGCGGGCAAGGAAGATC+AGG - chr8_2:11706800-11706819 None:intergenic 55.0%
GGCTTATCTTTCTCGGGTGC+TGG + chr8_2:11707051-11707070 Msa1234390:CDS 55.0%
!! GGACTACAAGAGTGCCAAGC+TGG + chr8_2:11708665-11708684 Msa1234390:CDS 55.0%
GCGCTCAAACGGAACCCATT+TGG + chr8_2:11708800-11708819 Msa1234390:three_prime_UTR 55.0%
AGCAGCGGAGGATGCGGATT+TGG - chr8_2:11698878-11698897 None:intergenic 60.0%
GAAGGAAGCAGCGGAGGATG+CGG - chr8_2:11698884-11698903 None:intergenic 60.0%
GCATCGGAGGACACTAGCTG+AGG + chr8_2:11700442-11700461 Msa1234390:CDS 60.0%
TAGCAGCCCTGGTGACCTGA+TGG + chr8_2:11701314-11701333 Msa1234390:CDS 60.0%
GGGAAATGCAACTGCGAGCC+GGG + chr8_2:11701541-11701560 Msa1234390:CDS 60.0%
GGAAATGCAACTGCGAGCCG+GGG + chr8_2:11701542-11701561 Msa1234390:CDS 60.0%
AGTAAGGGGGCGGCAAGAGA+GGG - chr8_2:11702966-11702985 None:intergenic 60.0%
TTAGGGAGGGAGTAAGGGGG+CGG - chr8_2:11702976-11702995 None:intergenic 60.0%
CTGGTCACCTAGAACCAGCC+TGG - chr8_2:11703419-11703438 None:intergenic 60.0%
!! CAGGCTGGTTCTAGGTGACC+AGG + chr8_2:11703417-11703436 Msa1234390:CDS 60.0%
AGCCCACCTTCCTCCATGGA+AGG - chr8_2:11703838-11703857 None:intergenic 60.0%
TAGGAGCCCACCTTCCTCCA+TGG - chr8_2:11703842-11703861 None:intergenic 60.0%
GGCAAGTGCCCAAAACGCGT+AGG - chr8_2:11705195-11705214 None:intergenic 60.0%
TGATATGCAGGCAGAGGCCG+CGG + chr8_2:11705725-11705744 Msa1234390:intron 60.0%
GCAGCATGTGCACCATCCAC+AGG - chr8_2:11705955-11705974 None:intergenic 60.0%
GCAGAGGCTGCTGCCTACAA+AGG + chr8_2:11706009-11706028 Msa1234390:CDS 60.0%
ATGGAATGGCTCCCGACCAC+CGG + chr8_2:11706329-11706348 Msa1234390:CDS 60.0%
GCATTAGTTGGCCGGTGGTC+GGG - chr8_2:11706343-11706362 None:intergenic 60.0%
GGCATTAGTTGGCCGGTGGT+CGG - chr8_2:11706344-11706363 None:intergenic 60.0%
TGCAGGCATTAGTTGGCCGG+TGG - chr8_2:11706348-11706367 None:intergenic 60.0%
!! GGTGGTGGTGGAGGTTGCGA+CGG - chr8_2:11698788-11698807 None:intergenic 65.0%
CATCACGACGGAACGCGGTG+CGG - chr8_2:11698815-11698834 None:intergenic 65.0%
GAGAGGGAAGGAAGCAGCGG+AGG - chr8_2:11698890-11698909 None:intergenic 65.0%
GCGGCAAGAGAGGGGCAATC+AGG - chr8_2:11702957-11702976 None:intergenic 65.0%
GTAAGGGGGCGGCAAGAGAG+GGG - chr8_2:11702965-11702984 None:intergenic 65.0%
GAGTAAGGGGGCGGCAAGAG+AGG - chr8_2:11702967-11702986 None:intergenic 65.0%
! GCGGACACCAGGCTGGTTCT+AGG + chr8_2:11703409-11703428 Msa1234390:CDS 65.0%
CAGCTGCAGCAGCCACCCTA+CGG - chr8_2:11705604-11705623 None:intergenic 65.0%
GCTTTCACCAGCAGCAGCCG+CGG - chr8_2:11705745-11705764 None:intergenic 65.0%
GTAGGCAGCAGCCTCTGCAC+TGG - chr8_2:11706007-11706026 None:intergenic 65.0%
!! TGCGGTGGTGGTGGTGGTGG+AGG - chr8_2:11698797-11698816 None:intergenic 70.0%
GCAGCGAGTCACCGCCCTTC+TGG + chr8_2:11703777-11703796 Msa1234390:CDS 70.0%
!! CGGTGCGGTGGTGGTGGTGG+TGG - chr8_2:11698800-11698819 None:intergenic 75.0%
!! ACGCGGTGCGGTGGTGGTGG+TGG - chr8_2:11698803-11698822 None:intergenic 75.0%
! GGAACGCGGTGCGGTGGTGG+TGG - chr8_2:11698806-11698825 None:intergenic 75.0%
GACGGAACGCGGTGCGGTGG+TGG - chr8_2:11698809-11698828 None:intergenic 75.0%
CACGACGGAACGCGGTGCGG+TGG - chr8_2:11698812-11698831 None:intergenic 75.0%
! GCAGAGGCCGCGGCTGCTGC+TGG + chr8_2:11705735-11705754 Msa1234390:CDS 80.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 11698593 11709113 11698593 ID=Msa1234390;Name=Msa1234390
chr8_2 mRNA 11698593 11709113 11698593 ID=Msa1234390-mRNA-1;Parent=Msa1234390;Name=Msa1234390-mRNA-1;_AED=0.09;_eAED=0.09;_QI=239|1|1|1|1|1|24|397|821
chr8_2 exon 11698593 11698933 11698593 ID=Msa1234390-mRNA-1:exon:4546;Parent=Msa1234390-mRNA-1
chr8_2 exon 11699037 11699243 11699037 ID=Msa1234390-mRNA-1:exon:4547;Parent=Msa1234390-mRNA-1
chr8_2 exon 11700389 11700463 11700389 ID=Msa1234390-mRNA-1:exon:4548;Parent=Msa1234390-mRNA-1
chr8_2 exon 11700913 11701014 11700913 ID=Msa1234390-mRNA-1:exon:4549;Parent=Msa1234390-mRNA-1
chr8_2 exon 11701166 11701216 11701166 ID=Msa1234390-mRNA-1:exon:4550;Parent=Msa1234390-mRNA-1
chr8_2 exon 11701297 11701402 11701297 ID=Msa1234390-mRNA-1:exon:4551;Parent=Msa1234390-mRNA-1
chr8_2 exon 11701486 11701605 11701486 ID=Msa1234390-mRNA-1:exon:4552;Parent=Msa1234390-mRNA-1
chr8_2 exon 11702844 11702935 11702844 ID=Msa1234390-mRNA-1:exon:4553;Parent=Msa1234390-mRNA-1
chr8_2 exon 11703334 11703502 11703334 ID=Msa1234390-mRNA-1:exon:4554;Parent=Msa1234390-mRNA-1
chr8_2 exon 11703581 11703657 11703581 ID=Msa1234390-mRNA-1:exon:4555;Parent=Msa1234390-mRNA-1
chr8_2 exon 11703766 11703864 11703766 ID=Msa1234390-mRNA-1:exon:4556;Parent=Msa1234390-mRNA-1
chr8_2 exon 11703964 11704054 11703964 ID=Msa1234390-mRNA-1:exon:4557;Parent=Msa1234390-mRNA-1
chr8_2 exon 11704652 11704737 11704652 ID=Msa1234390-mRNA-1:exon:4558;Parent=Msa1234390-mRNA-1
chr8_2 exon 11704817 11704987 11704817 ID=Msa1234390-mRNA-1:exon:4559;Parent=Msa1234390-mRNA-1
chr8_2 exon 11705351 11705404 11705351 ID=Msa1234390-mRNA-1:exon:4560;Parent=Msa1234390-mRNA-1
chr8_2 exon 11705503 11705631 11705503 ID=Msa1234390-mRNA-1:exon:4561;Parent=Msa1234390-mRNA-1
chr8_2 exon 11705735 11705827 11705735 ID=Msa1234390-mRNA-1:exon:4562;Parent=Msa1234390-mRNA-1
chr8_2 exon 11705919 11706065 11705919 ID=Msa1234390-mRNA-1:exon:4563;Parent=Msa1234390-mRNA-1
chr8_2 exon 11706274 11706371 11706274 ID=Msa1234390-mRNA-1:exon:4564;Parent=Msa1234390-mRNA-1
chr8_2 exon 11707045 11707129 11707045 ID=Msa1234390-mRNA-1:exon:4565;Parent=Msa1234390-mRNA-1
chr8_2 exon 11707864 11707922 11707864 ID=Msa1234390-mRNA-1:exon:4566;Parent=Msa1234390-mRNA-1
chr8_2 exon 11708096 11708194 11708096 ID=Msa1234390-mRNA-1:exon:4567;Parent=Msa1234390-mRNA-1
chr8_2 exon 11708286 11708369 11708286 ID=Msa1234390-mRNA-1:exon:4568;Parent=Msa1234390-mRNA-1
chr8_2 exon 11708647 11709113 11708647 ID=Msa1234390-mRNA-1:exon:4569;Parent=Msa1234390-mRNA-1
chr8_2 five_prime_UTR 11698593 11698831 11698593 ID=Msa1234390-mRNA-1:five_prime_utr;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11698832 11698933 11698832 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11699037 11699243 11699037 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11700389 11700463 11700389 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11700913 11701014 11700913 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11701166 11701216 11701166 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11701297 11701402 11701297 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11701486 11701605 11701486 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11702844 11702935 11702844 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11703334 11703502 11703334 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11703581 11703657 11703581 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11703766 11703864 11703766 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11703964 11704054 11703964 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11704652 11704737 11704652 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11704817 11704987 11704817 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11705351 11705404 11705351 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11705503 11705631 11705503 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11705735 11705827 11705735 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11705919 11706065 11705919 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11706274 11706371 11706274 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11707045 11707129 11707045 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11707864 11707922 11707864 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11708096 11708194 11708096 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11708286 11708369 11708286 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 CDS 11708647 11708716 11708647 ID=Msa1234390-mRNA-1:cds;Parent=Msa1234390-mRNA-1
chr8_2 three_prime_UTR 11708717 11709113 11708717 ID=Msa1234390-mRNA-1:three_prime_utr;Parent=Msa1234390-mRNA-1
Gene Sequence

>Msa1234390

ATGAGAGAACCTCGAGATGCAACCAAAACCGATCTCAAAACAGCCAAATCCGCATCCTCCGCTGCTTCCTTCCCTCTCATTCTCGACATCGATGATTTCAAGGGTGATTTCTCGTTCGATGCGTTGTTCGGGAATTTGGTGAACGAGCTTCTTCCATCGTTCAAATTAGAAGACCTTGAAGCGGAAGGTGCTGATGCTGTGCAAAATAAATACTCGCAAGTTGCTACCAGTCCTTTGTTTCCTGAAGTTGAGAAGCTTTTGTCTTTGTTCAAGGATTCTTGTAAGGAATTGCTTGAGCTACGCAAACAGATTGATGGGAGACTACACAATCTCAAGAAAGATGTTTCTGTTCAAGACTCTAAGCATCGGAGGACACTAGCTGAGCTAGAGAAAGGTGTAGATGGGTTGTTTGAAAGCTTTGCGAGGTTGGATTCACGTATATCAAGTGTTGGTCAGACAGCTGCAAAGATAGGAGATCATCTCCAGAGTGCAGATGCTCAGCGAGAAACGGCCAGTCAAACTATTGAGCTGATAAAATACTTAATGGAGTTCAATAGCAGCCCTGGTGACCTGATGGAGCTTTCTCCTCTTTTTTCTGATGATAGCCGTGTTGCTGAGGCTGCTTCAATTGCCCAAAAATTGCGATCATTTGCTGAAGAAGATATTGGAAGACATGGTATAACTGCACCATCAGCGGTGGGAAATGCAACTGCGAGCCGGGGATTAGAAGTTGCAGTTGCTAATTTACAGGAATACTGTAATGAACTGGAGAATAGATTGCTTTCTCGGTTCGATGCAGCGTCACAGAAAAGAGAATTGACCACAATGGCAGAATGTGCCAAAATTTTGTCTCAGTTCAACAGGGGCACAAGTGCCATGCAACATTATGTGGCAACACGTCCAATGTTTATTGATGTGGAAGTAATGAATGCGGACACCAGGCTGGTTCTAGGTGACCAGGCTGCACAAAGTAGTCCTAATAATGTTGCTCGTGGGCTTTCCTCCCTGTACAAAGAAATCACAGATACTGTCCGTAAAGAGGCTGCAACAATCACTGCTGTATTCCCTTCACCCAACGAAGTTATGTCAATTTTAGTTCAGCGAGTCTTAGAGCAGCGAGTCACCGCCCTTCTGGACAAACTATTAGTTAAACCATCTCTTGTAAATTTACCTTCCATGGAGGAAGGTGGGCTCCTATTCTATCTTCGCATGCTGGCTGTGTCGTATGAAAAGACCCAAGAAATTGCTAGAGATCTCCGAACTGTAGGATGTGGTGACTTGGATGTTGAGGGCCTGACAGAGTCCCTGTTTTCAAGTCACAAGGATGAATATCCTGAATATGAGCAGGCATCTCTTAGACAATTATATAAAGTGAAGATGGAAGAATTGCGAGCTGAAAGCCAGATTTCTGATTCATCTGGGACAATTGGACGCTCAAAGGGAGCTACAGTAGCTTCTTCTCAGCAGCAAATATCTGTCACTGTTGTAACAGAGTTTGTGCGTTGGAATGAAGAAGCAATCACAAGATGCAATCTTTTTTCCTCACAGCCTTCTACACTGGCAACCCTTGTAAAAGCAGTGTTTACTTGCCTGCTAGACCAAGTTAGTCAATATATAGCTGAAGGTCTTGAACGGGCTAGAGACGGTCTGACCGAAGCTGCTAATTTGAGGGAAAGATTTGTGCTGGGTACAAGTGTTAGCCGTAGGGTGGCTGCTGCAGCTGCATCTGCTGCAGAGGCCGCGGCTGCTGCTGGTGAAAGCAGTTTTAGATCTTTCATGGTTGCTGTACAACGTTCAGGAAGCAGTGTAGCTATCATTCAACAATACTTTTCCAATTCTATATCTAGGCTTTTGCTTCCTGTGGATGGTGCACATGCTGCTGCTTGTGAAGAAATGGCTACAGCAATGTCCAGTGCAGAGGCTGCTGCCTACAAAGGATTACAACAGTGTATTGAAACTGTCATGGCTGAGGTAGAACGATTGCTTTCTGCTGAGCAGAAGGCTACAGATTATAAATCCCCTGATGATGGAATGGCTCCCGACCACCGGCCAACTAATGCCTGCACAAGGGTTGTGGCTTATCTTTCTCGGGTGCTGGAGTCTGCATTCACTGCTTTAGAAGGACTTAATAAACAAGCATTTCTGTCTGAATTGGGAAATCGCTTGCACAAGGTTCTGCTAAACCATTGGCAAAAATACACTTTCAATCCAAGTGGGGGATTGCGACTTAAGCGTGACATTACCGAGTATGGAGAGTTTGTGCGTAGTTTCAATGCTCCTTCTGTTGACGAAAAATTTGAATTGTTGGGCATATTGGCCAATGTCTTCATTGTTGCTCCGGAGAGTCTTTCAACTTTGTTTGAGGGTACACCCAGCATTCGGAAAGATGCGCAAAGATTTATTCAACTTCGGGAGGACTACAAGAGTGCCAAGCTGGCATCCAAACTGAGTTCTTTGTGGTCTTAA
Protein sequence

>Msa1234390

MREPRDATKTDLKTAKSASSAASFPLILDIDDFKGDFSFDALFGNLVNELLPSFKLEDLEAEGADAVQNKYSQVATSPLFPEVEKLLSLFKDSCKELLELRKQIDGRLHNLKKDVSVQDSKHRRTLAELEKGVDGLFESFARLDSRISSVGQTAAKIGDHLQSADAQRETASQTIELIKYLMEFNSSPGDLMELSPLFSDDSRVAEAASIAQKLRSFAEEDIGRHGITAPSAVGNATASRGLEVAVANLQEYCNELENRLLSRFDAASQKRELTTMAECAKILSQFNRGTSAMQHYVATRPMFIDVEVMNADTRLVLGDQAAQSSPNNVARGLSSLYKEITDTVRKEAATITAVFPSPNEVMSILVQRVLEQRVTALLDKLLVKPSLVNLPSMEEGGLLFYLRMLAVSYEKTQEIARDLRTVGCGDLDVEGLTESLFSSHKDEYPEYEQASLRQLYKVKMEELRAESQISDSSGTIGRSKGATVASSQQQISVTVVTEFVRWNEEAITRCNLFSSQPSTLATLVKAVFTCLLDQVSQYIAEGLERARDGLTEAANLRERFVLGTSVSRRVAAAAASAAEAAAAAGESSFRSFMVAVQRSGSSVAIIQQYFSNSISRLLLPVDGAHAAACEEMATAMSSAEAAAYKGLQQCIETVMAEVERLLSAEQKATDYKSPDDGMAPDHRPTNACTRVVAYLSRVLESAFTALEGLNKQAFLSELGNRLHKVLLNHWQKYTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGILANVFIVAPESLSTLFEGTPSIRKDAQRFIQLREDYKSAKLASKLSSLWS*