Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1234740 | XP_003627378.2 | 86.275 | 102 | 4 | 1 | 19 | 110 | 129 | 230 | 7.29e-54 | 178 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1234740 | sp|Q9LQI7|CIA30_ARATH | 69.792 | 96 | 19 | 1 | 19 | 104 | 130 | 225 | 2.18e-42 | 141 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1234740 | G7L8D3 | 86.275 | 102 | 4 | 1 | 19 | 110 | 129 | 230 | 3.48e-54 | 178 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0703230 | Msa1234740 | 0.800464 | 1.423888e-48 | -8.615850e-47 |
| Msa1234680 | Msa1234740 | 0.838611 | 2.593989e-57 | -8.615850e-47 |
| Msa1081150 | Msa1234740 | 0.801415 | 9.102860e-49 | -8.615850e-47 |
| Msa0268130 | Msa1234740 | 0.802202 | 6.274652e-49 | -8.615850e-47 |
| Msa0298990 | Msa1234740 | 0.800259 | 1.567218e-48 | -8.615850e-47 |
| Msa1126510 | Msa1234740 | 0.806802 | 6.891506e-50 | -8.615850e-47 |
| Msa1166860 | Msa1234740 | 0.811482 | 6.848745e-51 | -8.615850e-47 |
| Msa0508630 | Msa1234740 | 0.805777 | 1.133311e-49 | -8.615850e-47 |
| Msa0541860 | Msa1234740 | 0.801003 | 1.105316e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1234740 | MtrunA17_Chr8g0344731 | 86.275 | 102 | 4 | 1 | 19 | 110 | 129 | 230 | 6.71e-58 | 178 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1234740 | AT1G17350.3 | 69.792 | 96 | 19 | 1 | 19 | 104 | 130 | 225 | 2.22e-43 | 141 |
| Msa1234740 | AT1G17350.5 | 69.792 | 96 | 19 | 1 | 19 | 104 | 130 | 225 | 2.22e-43 | 141 |
| Msa1234740 | AT1G17350.1 | 69.792 | 96 | 19 | 1 | 19 | 104 | 130 | 225 | 2.22e-43 | 141 |
| Msa1234740 | AT1G17350.4 | 69.792 | 96 | 19 | 1 | 19 | 104 | 130 | 225 | 2.22e-43 | 141 |
| Msa1234740 | AT1G72420.4 | 62.887 | 97 | 25 | 2 | 19 | 104 | 119 | 215 | 3.45e-38 | 127 |
| Msa1234740 | AT1G72420.1 | 62.887 | 97 | 25 | 2 | 19 | 104 | 130 | 226 | 3.75e-38 | 128 |
| Msa1234740 | AT1G72420.2 | 62.887 | 97 | 25 | 2 | 19 | 104 | 130 | 226 | 3.75e-38 | 128 |
| Msa1234740 | AT1G17350.2 | 64.894 | 94 | 15 | 1 | 19 | 94 | 130 | 223 | 2.94e-36 | 123 |
Find 32 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGATATACACGGAGAAT+TGG | 0.328795 | 8_2:-12410280 | Msa1234740:intron |
| CAAAACCTATACTACATCAT+TGG | 0.343817 | 8_2:+12407947 | None:intergenic |
| GGGTTTGAAGTTTCATTTCA+TGG | 0.373268 | 8_2:-12410338 | Msa1234740:CDS |
| ATTTCAGACTTGAACTTGAA+TGG | 0.375010 | 8_2:-12407994 | Msa1234740:CDS |
| GGTGTCCCAGGTGCTAGATC+TGG | 0.377828 | 8_2:-12408025 | Msa1234740:CDS |
| ATGAATCCATCACGTGTTCT+TGG | 0.389127 | 8_2:-12408076 | Msa1234740:CDS |
| CATTGGGTTCTCACTTCTCA+TGG | 0.392116 | 8_2:+12407964 | None:intergenic |
| AAATTTCCTAGGATATCATT+TGG | 0.408054 | 8_2:+12410364 | Msa1234750:intron |
| TGATATCCTAGGAAATTTAG+AGG | 0.413569 | 8_2:-12410359 | Msa1234740:CDS |
| AAAACCTATACTACATCATT+GGG | 0.453436 | 8_2:+12407948 | None:intergenic |
| TCAAACCCTCTAAATTTCCT+AGG | 0.453858 | 8_2:+12410353 | Msa1234750:intron |
| AATGCCGAGGGTGGTGTCCC+AGG | 0.459127 | 8_2:-12408037 | Msa1234740:CDS |
| GCAGATATACACGGAGAATT+GGG | 0.459883 | 8_2:-12410279 | Msa1234740:intron |
| CCTGGTCCAGATCTAGCACC+TGG | 0.491978 | 8_2:+12408019 | None:intergenic |
| AAAATGCCAAATGATATCCT+AGG | 0.508182 | 8_2:-12410370 | Msa1234740:CDS |
| GAGTTGTCCTCCATCTGTCC+AGG | 0.525035 | 8_2:+12410248 | Msa1234750:intron |
| TAGCTCGATATGTACCTACT+TGG | 0.540332 | 8_2:-12408129 | Msa1234740:CDS |
| GGTTAACTCACCTGGACAGA+TGG | 0.543070 | 8_2:-12410258 | Msa1234740:CDS |
| GATATCCTAGGAAATTTAGA+GGG | 0.570719 | 8_2:-12410358 | Msa1234740:CDS |
| GACAGATGGAGGACAACTCA+TGG | 0.575304 | 8_2:-12410244 | Msa1234740:CDS |
| AGCACCTGGGACACCACCCT+CGG | 0.576679 | 8_2:+12408033 | None:intergenic |
| CCAGGTGCTAGATCTGGACC+AGG | 0.581357 | 8_2:-12408019 | Msa1234740:CDS |
| GAGAATTGGGTTAACTCACC+TGG | 0.591802 | 8_2:-12410266 | Msa1234740:CDS |
| CGATATGTACCTACTTGGAG+AGG | 0.604855 | 8_2:-12408124 | Msa1234740:CDS |
| GACATGCCAAGAACACGTGA+TGG | 0.606451 | 8_2:+12408070 | None:intergenic |
| GTAGGTACATATCGAGCTAG+AGG | 0.608047 | 8_2:+12408133 | None:intergenic |
| AGTTCAAGTCTGAAATCACC+TGG | 0.640637 | 8_2:+12408001 | None:intergenic |
| ATAACGTTCCCTCTCCAAGT+AGG | 0.644498 | 8_2:+12408115 | None:intergenic |
| TAACTCACCTGGACAGATGG+AGG | 0.644910 | 8_2:-12410255 | Msa1234740:CDS |
| GATATGTACCTACTTGGAGA+GGG | 0.669899 | 8_2:-12408123 | Msa1234740:CDS |
| GATTATGGTGCAGATATACA+CGG | 0.690928 | 8_2:-12410288 | Msa1234740:intron |
| CTGGTCCAGATCTAGCACCT+GGG | 0.695025 | 8_2:+12408020 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTATCAATTTAATGAA+TGG | - | chr8_2:12409013-12409032 | Msa1234740:intron | 10.0% |
| !! | AATATTATCAATTTAATGAA+TGG | - | chr8_2:12409013-12409032 | Msa1234740:intron | 10.0% |
| !!! | CAGAAAAAATATAGAATTTT+TGG | - | chr8_2:12408369-12408388 | Msa1234740:intron | 15.0% |
| !!! | TTAAAAAACACTATCATTTT+AGG | + | chr8_2:12409178-12409197 | Msa1234750:intron | 15.0% |
| !!! | TTTGATTTTGAAGAAAAAAA+AGG | - | chr8_2:12409885-12409904 | Msa1234740:intron | 15.0% |
| !!! | TTGATTTTGAAGAAAAAAAA+GGG | - | chr8_2:12409886-12409905 | Msa1234740:intron | 15.0% |
| !!! | CAGAAAAAATATAGAATTTT+TGG | - | chr8_2:12408369-12408388 | Msa1234740:intron | 15.0% |
| !!! | TTAAAAAACACTATCATTTT+AGG | + | chr8_2:12409178-12409197 | Msa1234750:intron | 15.0% |
| !!! | TTTGATTTTGAAGAAAAAAA+AGG | - | chr8_2:12409885-12409904 | Msa1234740:intron | 15.0% |
| !!! | TTGATTTTGAAGAAAAAAAA+GGG | - | chr8_2:12409886-12409905 | Msa1234740:intron | 15.0% |
| !!! | TTTTTATAATAAGTCACGTT+TGG | + | chr8_2:12408438-12408457 | None:intergenic | 20.0% |
| !!! | ATTTTGCATTCAGATAAAAA+AGG | + | chr8_2:12408548-12408567 | None:intergenic | 20.0% |
| !! | ACCAAATAATTTAAACTTTG+GGG | + | chr8_2:12409057-12409076 | Msa1234750:intron | 20.0% |
| !! | CACCAAATAATTTAAACTTT+GGG | + | chr8_2:12409058-12409077 | Msa1234750:intron | 20.0% |
| !! | TCACCAAATAATTTAAACTT+TGG | + | chr8_2:12409059-12409078 | Msa1234750:intron | 20.0% |
| !!! | TTAAATTATTTGGTGAAATC+AGG | - | chr8_2:12409063-12409082 | Msa1234740:intron | 20.0% |
| !! | ATAACAAGTACAAAATCAAT+GGG | + | chr8_2:12409574-12409593 | Msa1234750:intron | 20.0% |
| !! | TATAACAAGTACAAAATCAA+TGG | + | chr8_2:12409575-12409594 | Msa1234750:intron | 20.0% |
| !!! | TATTTTTGTCTATTTTGTTC+TGG | - | chr8_2:12409667-12409686 | Msa1234740:intron | 20.0% |
| !!! | TGATTTTGAAGAAAAAAAAG+GGG | - | chr8_2:12409887-12409906 | Msa1234740:intron | 20.0% |
| !!! | TTTTTATAATAAGTCACGTT+TGG | + | chr8_2:12408438-12408457 | None:intergenic | 20.0% |
| !!! | ATTTTGCATTCAGATAAAAA+AGG | + | chr8_2:12408548-12408567 | None:intergenic | 20.0% |
| !! | ACCAAATAATTTAAACTTTG+GGG | + | chr8_2:12409057-12409076 | Msa1234750:intron | 20.0% |
| !! | CACCAAATAATTTAAACTTT+GGG | + | chr8_2:12409058-12409077 | Msa1234750:intron | 20.0% |
| !! | TCACCAAATAATTTAAACTT+TGG | + | chr8_2:12409059-12409078 | Msa1234750:intron | 20.0% |
| !!! | TTAAATTATTTGGTGAAATC+AGG | - | chr8_2:12409063-12409082 | Msa1234740:intron | 20.0% |
| !! | ATAACAAGTACAAAATCAAT+GGG | + | chr8_2:12409574-12409593 | Msa1234750:intron | 20.0% |
| !! | TATAACAAGTACAAAATCAA+TGG | + | chr8_2:12409575-12409594 | Msa1234750:intron | 20.0% |
| !!! | TATTTTTGTCTATTTTGTTC+TGG | - | chr8_2:12409667-12409686 | Msa1234740:intron | 20.0% |
| !!! | TGATTTTGAAGAAAAAAAAG+GGG | - | chr8_2:12409887-12409906 | Msa1234740:intron | 20.0% |
| ! | AAATTTCCTAGGATATCATT+TGG | + | chr8_2:12407964-12407983 | None:intergenic | 25.0% |
| ! | TATTGTAACTAGTTGGATTA+TGG | - | chr8_2:12408022-12408041 | Msa1234740:CDS | 25.0% |
| ! | TATCAAAATCTGCTATGTTA+TGG | + | chr8_2:12408254-12408273 | None:intergenic | 25.0% |
| ! | ACTATCTTAGTTTCTCTATT+AGG | - | chr8_2:12408296-12408315 | Msa1234740:intron | 25.0% |
| ! | TTTCTCTATTAGGAAAATAG+CGG | - | chr8_2:12408306-12408325 | Msa1234740:intron | 25.0% |
| ! | ATTCAGATAAAAAAGGAAAC+GGG | + | chr8_2:12408541-12408560 | None:intergenic | 25.0% |
| ! | CATTCAGATAAAAAAGGAAA+CGG | + | chr8_2:12408542-12408561 | None:intergenic | 25.0% |
| ! | TCTATTTAACAATGAAGTTC+TGG | - | chr8_2:12408638-12408657 | Msa1234740:intron | 25.0% |
| !! | ATGATAACCTGTAATTTTGT+AGG | - | chr8_2:12408706-12408725 | Msa1234740:intron | 25.0% |
| ! | AATGAGATAGTATACATTTG+TGG | + | chr8_2:12408797-12408816 | None:intergenic | 25.0% |
| ! | TCCCCAAAGTTTAAATTATT+TGG | - | chr8_2:12409053-12409072 | Msa1234740:intron | 25.0% |
| !! | TATGATTCATTTGTTGCATT+TGG | + | chr8_2:12409206-12409225 | Msa1234750:intron | 25.0% |
| ! | AATGCAACAAATGAATCATA+AGG | - | chr8_2:12409206-12409225 | Msa1234740:intron | 25.0% |
| ! | CTTTACAAACAAGTTCAAAT+TGG | + | chr8_2:12409298-12409317 | Msa1234750:intron | 25.0% |
| !! | CAATTTGAACTTGTTTGTAA+AGG | - | chr8_2:12409296-12409315 | Msa1234740:intron | 25.0% |
| ! | TAAGCTAAATTTAGCTACAA+CGG | - | chr8_2:12409487-12409506 | Msa1234740:intron | 25.0% |
| ! | TTATCTATTGAGTAAACACT+TGG | - | chr8_2:12409856-12409875 | Msa1234740:intron | 25.0% |
| ! | TATCTATTGAGTAAACACTT+GGG | - | chr8_2:12409857-12409876 | Msa1234740:intron | 25.0% |
| ! | CTAAAAGAATAATTGTTGCT+TGG | - | chr8_2:12410004-12410023 | Msa1234740:intron | 25.0% |
| ! | TTCTATGTATATGTAAGTGA+AGG | - | chr8_2:12410045-12410064 | Msa1234740:intron | 25.0% |
| ! | TCTATGTATATGTAAGTGAA+GGG | - | chr8_2:12410046-12410065 | Msa1234740:intron | 25.0% |
| ! | AAATTTCCTAGGATATCATT+TGG | + | chr8_2:12407964-12407983 | None:intergenic | 25.0% |
| ! | TATTGTAACTAGTTGGATTA+TGG | - | chr8_2:12408022-12408041 | Msa1234740:CDS | 25.0% |
| ! | TATCAAAATCTGCTATGTTA+TGG | + | chr8_2:12408254-12408273 | None:intergenic | 25.0% |
| ! | ACTATCTTAGTTTCTCTATT+AGG | - | chr8_2:12408296-12408315 | Msa1234740:intron | 25.0% |
| ! | TTTCTCTATTAGGAAAATAG+CGG | - | chr8_2:12408306-12408325 | Msa1234740:intron | 25.0% |
| ! | ATTCAGATAAAAAAGGAAAC+GGG | + | chr8_2:12408541-12408560 | None:intergenic | 25.0% |
| ! | CATTCAGATAAAAAAGGAAA+CGG | + | chr8_2:12408542-12408561 | None:intergenic | 25.0% |
| ! | TCTATTTAACAATGAAGTTC+TGG | - | chr8_2:12408638-12408657 | Msa1234740:intron | 25.0% |
| !! | ATGATAACCTGTAATTTTGT+AGG | - | chr8_2:12408706-12408725 | Msa1234740:intron | 25.0% |
| ! | AATGAGATAGTATACATTTG+TGG | + | chr8_2:12408797-12408816 | None:intergenic | 25.0% |
| ! | TCCCCAAAGTTTAAATTATT+TGG | - | chr8_2:12409053-12409072 | Msa1234740:intron | 25.0% |
| !! | TATGATTCATTTGTTGCATT+TGG | + | chr8_2:12409206-12409225 | Msa1234750:intron | 25.0% |
| ! | AATGCAACAAATGAATCATA+AGG | - | chr8_2:12409206-12409225 | Msa1234740:intron | 25.0% |
| ! | CTTTACAAACAAGTTCAAAT+TGG | + | chr8_2:12409298-12409317 | Msa1234750:intron | 25.0% |
| !! | CAATTTGAACTTGTTTGTAA+AGG | - | chr8_2:12409296-12409315 | Msa1234740:intron | 25.0% |
| ! | TAAGCTAAATTTAGCTACAA+CGG | - | chr8_2:12409487-12409506 | Msa1234740:intron | 25.0% |
| ! | TTATCTATTGAGTAAACACT+TGG | - | chr8_2:12409856-12409875 | Msa1234740:intron | 25.0% |
| ! | TATCTATTGAGTAAACACTT+GGG | - | chr8_2:12409857-12409876 | Msa1234740:intron | 25.0% |
| ! | CTAAAAGAATAATTGTTGCT+TGG | - | chr8_2:12410004-12410023 | Msa1234740:intron | 25.0% |
| ! | TTCTATGTATATGTAAGTGA+AGG | - | chr8_2:12410045-12410064 | Msa1234740:intron | 25.0% |
| ! | TCTATGTATATGTAAGTGAA+GGG | - | chr8_2:12410046-12410065 | Msa1234740:intron | 25.0% |
| TGATATCCTAGGAAATTTAG+AGG | - | chr8_2:12407966-12407985 | Msa1234740:CDS | 30.0% | |
| GATATCCTAGGAAATTTAGA+GGG | - | chr8_2:12407967-12407986 | Msa1234740:CDS | 30.0% | |
| ! | TTGCAAGTATTGTAACTAGT+TGG | - | chr8_2:12408015-12408034 | Msa1234740:CDS | 30.0% |
| GCAATATACCAGTTATCTTT+GGG | + | chr8_2:12408125-12408144 | None:intergenic | 30.0% | |
| TGCAATATACCAGTTATCTT+TGG | + | chr8_2:12408126-12408145 | None:intergenic | 30.0% | |
| AGATAACTGGTATATTGCAA+AGG | - | chr8_2:12408127-12408146 | Msa1234740:CDS | 30.0% | |
| CATATCGATCATTACTAATC+AGG | + | chr8_2:12408183-12408202 | None:intergenic | 30.0% | |
| TTCTCTATTAGGAAAATAGC+GGG | - | chr8_2:12408307-12408326 | Msa1234740:intron | 30.0% | |
| AGCGAAGCTTACATATTAAA+AGG | + | chr8_2:12408513-12408532 | None:intergenic | 30.0% | |
| TTCAGATAAAAAAGGAAACG+GGG | + | chr8_2:12408540-12408559 | None:intergenic | 30.0% | |
| AGTCAACTATACACAAGAAA+AGG | + | chr8_2:12408572-12408591 | None:intergenic | 30.0% | |
| TGACTTATTTCAATGACATG+CGG | - | chr8_2:12408587-12408606 | Msa1234740:intron | 30.0% | |
| TAAATAGAAGATAGCATTGC+AGG | + | chr8_2:12408626-12408645 | None:intergenic | 30.0% | |
| AATACGTCCTACAAAATTAC+AGG | + | chr8_2:12408716-12408735 | None:intergenic | 30.0% | |
| ! | CTACGTTTTGCAATTTAATC+AGG | + | chr8_2:12408827-12408846 | None:intergenic | 30.0% |
| TTGAGATTAAGGACTAGATA+AGG | - | chr8_2:12408868-12408887 | Msa1234740:intron | 30.0% | |
| ACTTCGATTATGCAAATTTC+TGG | - | chr8_2:12408990-12409009 | Msa1234740:intron | 30.0% | |
| AAACTAGAATCAAGAGTTTG+AGG | - | chr8_2:12409112-12409131 | Msa1234740:intron | 30.0% | |
| ! | CTATCATTTTAGGCATGTAA+AGG | + | chr8_2:12409168-12409187 | Msa1234750:intron | 30.0% |
| ! | TTTGAACTTGTTTGTAAAGG+AGG | - | chr8_2:12409299-12409318 | Msa1234740:intron | 30.0% |
| TTGTTTGTAAAGGAGGTTAA+CGG | - | chr8_2:12409306-12409325 | Msa1234740:intron | 30.0% | |
| AAGTTTGCAATGAAACCAAA+AGG | - | chr8_2:12409415-12409434 | Msa1234740:intron | 30.0% | |
| ! | AAATTTAGCTTAGTAGAGCT+AGG | + | chr8_2:12409479-12409498 | Msa1234750:intron | 30.0% |
| AAGCTAAATTTAGCTACAAC+GGG | - | chr8_2:12409488-12409507 | Msa1234740:intron | 30.0% | |
| TCAATATTACTAAAGAGCGA+CGG | + | chr8_2:12409533-12409552 | Msa1234750:intron | 30.0% | |
| ATCTATTGAGTAAACACTTG+GGG | - | chr8_2:12409858-12409877 | Msa1234740:intron | 30.0% | |
| !! | AGAAAAAAAAGGGGTTTTGA+TGG | - | chr8_2:12409896-12409915 | Msa1234740:intron | 30.0% |
| ATATACATAGAAAGCCAACA+AGG | + | chr8_2:12410037-12410056 | Msa1234750:intron | 30.0% | |
| ATTTCAGACTTGAACTTGAA+TGG | - | chr8_2:12410331-12410350 | Msa1234740:CDS | 30.0% | |
| TGATATCCTAGGAAATTTAG+AGG | - | chr8_2:12407966-12407985 | Msa1234740:CDS | 30.0% | |
| GATATCCTAGGAAATTTAGA+GGG | - | chr8_2:12407967-12407986 | Msa1234740:CDS | 30.0% | |
| ! | TTGCAAGTATTGTAACTAGT+TGG | - | chr8_2:12408015-12408034 | Msa1234740:CDS | 30.0% |
| GCAATATACCAGTTATCTTT+GGG | + | chr8_2:12408125-12408144 | None:intergenic | 30.0% | |
| TGCAATATACCAGTTATCTT+TGG | + | chr8_2:12408126-12408145 | None:intergenic | 30.0% | |
| AGATAACTGGTATATTGCAA+AGG | - | chr8_2:12408127-12408146 | Msa1234740:CDS | 30.0% | |
| CATATCGATCATTACTAATC+AGG | + | chr8_2:12408183-12408202 | None:intergenic | 30.0% | |
| TTCTCTATTAGGAAAATAGC+GGG | - | chr8_2:12408307-12408326 | Msa1234740:intron | 30.0% | |
| AGCGAAGCTTACATATTAAA+AGG | + | chr8_2:12408513-12408532 | None:intergenic | 30.0% | |
| TTCAGATAAAAAAGGAAACG+GGG | + | chr8_2:12408540-12408559 | None:intergenic | 30.0% | |
| AGTCAACTATACACAAGAAA+AGG | + | chr8_2:12408572-12408591 | None:intergenic | 30.0% | |
| TGACTTATTTCAATGACATG+CGG | - | chr8_2:12408587-12408606 | Msa1234740:intron | 30.0% | |
| TAAATAGAAGATAGCATTGC+AGG | + | chr8_2:12408626-12408645 | None:intergenic | 30.0% | |
| AATACGTCCTACAAAATTAC+AGG | + | chr8_2:12408716-12408735 | None:intergenic | 30.0% | |
| ! | CTACGTTTTGCAATTTAATC+AGG | + | chr8_2:12408827-12408846 | None:intergenic | 30.0% |
| TTGAGATTAAGGACTAGATA+AGG | - | chr8_2:12408868-12408887 | Msa1234740:intron | 30.0% | |
| ACTTCGATTATGCAAATTTC+TGG | - | chr8_2:12408990-12409009 | Msa1234740:intron | 30.0% | |
| AAACTAGAATCAAGAGTTTG+AGG | - | chr8_2:12409112-12409131 | Msa1234740:intron | 30.0% | |
| ! | CTATCATTTTAGGCATGTAA+AGG | + | chr8_2:12409168-12409187 | Msa1234750:intron | 30.0% |
| ! | TTTGAACTTGTTTGTAAAGG+AGG | - | chr8_2:12409299-12409318 | Msa1234740:intron | 30.0% |
| TTGTTTGTAAAGGAGGTTAA+CGG | - | chr8_2:12409306-12409325 | Msa1234740:intron | 30.0% | |
| AAGTTTGCAATGAAACCAAA+AGG | - | chr8_2:12409415-12409434 | Msa1234740:intron | 30.0% | |
| ! | AAATTTAGCTTAGTAGAGCT+AGG | + | chr8_2:12409479-12409498 | Msa1234750:intron | 30.0% |
| AAGCTAAATTTAGCTACAAC+GGG | - | chr8_2:12409488-12409507 | Msa1234740:intron | 30.0% | |
| TCAATATTACTAAAGAGCGA+CGG | + | chr8_2:12409533-12409552 | Msa1234750:intron | 30.0% | |
| ATCTATTGAGTAAACACTTG+GGG | - | chr8_2:12409858-12409877 | Msa1234740:intron | 30.0% | |
| !! | AGAAAAAAAAGGGGTTTTGA+TGG | - | chr8_2:12409896-12409915 | Msa1234740:intron | 30.0% |
| ATATACATAGAAAGCCAACA+AGG | + | chr8_2:12410037-12410056 | Msa1234750:intron | 30.0% | |
| ATTTCAGACTTGAACTTGAA+TGG | - | chr8_2:12410331-12410350 | Msa1234740:CDS | 30.0% | |
| TCAAACCCTCTAAATTTCCT+AGG | + | chr8_2:12407975-12407994 | None:intergenic | 35.0% | |
| ! | GGGTTTGAAGTTTCATTTCA+TGG | - | chr8_2:12407987-12408006 | Msa1234740:CDS | 35.0% |
| GATTATGGTGCAGATATACA+CGG | - | chr8_2:12408037-12408056 | Msa1234740:CDS | 35.0% | |
| GTAAGCAGTAAGATGGAAAT+GGG | + | chr8_2:12408158-12408177 | None:intergenic | 35.0% | |
| TGTAAGCAGTAAGATGGAAA+TGG | + | chr8_2:12408159-12408178 | None:intergenic | 35.0% | |
| AATGATCGATATGTTCGACT+AGG | - | chr8_2:12408190-12408209 | Msa1234740:intron | 35.0% | |
| !! | TAGTGTTGAGGTTTTTGTTG+CGG | + | chr8_2:12408280-12408299 | None:intergenic | 35.0% |
| GAGAAACTAAGATAGTGTTG+AGG | + | chr8_2:12408292-12408311 | None:intergenic | 35.0% | |
| TCAGATAAAAAAGGAAACGG+GGG | + | chr8_2:12408539-12408558 | None:intergenic | 35.0% | |
| ACTATTGTAAAACCTTGCAG+TGG | + | chr8_2:12408935-12408954 | None:intergenic | 35.0% | |
| ! | ATTTAAACTTTGGGGAGAGT+TGG | + | chr8_2:12409049-12409068 | Msa1234750:intron | 35.0% |
| TAAAGGACCAACTAAATTGC+AGG | + | chr8_2:12409151-12409170 | Msa1234750:intron | 35.0% | |
| ! | TCTGTGACATTGTTTGAGTT+GGG | + | chr8_2:12409366-12409385 | Msa1234750:intron | 35.0% |
| ! | ATGGGTTTCTTCATGTTTTC+TGG | + | chr8_2:12409389-12409408 | Msa1234750:intron | 35.0% |
| TGTTCTGGTCTATTCTATTG+TGG | - | chr8_2:12409682-12409701 | Msa1234740:intron | 35.0% | |
| TATTGTGGTCTGATCTAGTA+TGG | - | chr8_2:12409697-12409716 | Msa1234740:intron | 35.0% | |
| ATTGTGGTCTGATCTAGTAT+GGG | - | chr8_2:12409698-12409717 | Msa1234740:intron | 35.0% | |
| TGGTCAGGAAATACCATAAA+CGG | - | chr8_2:12409916-12409935 | Msa1234740:intron | 35.0% | |
| AGGAAATACCATAAACGGAT+AGG | - | chr8_2:12409921-12409940 | Msa1234740:intron | 35.0% | |
| TGTATATGTAAGTGAAGGGA+TGG | - | chr8_2:12410050-12410069 | Msa1234740:intron | 35.0% | |
| GTATATGTAAGTGAAGGGAT+GGG | - | chr8_2:12410051-12410070 | Msa1234740:intron | 35.0% | |
| CATCACTTCAGTGCTTAATA+TGG | + | chr8_2:12410087-12410106 | Msa1234750:intron | 35.0% | |
| TCAAACCCTCTAAATTTCCT+AGG | + | chr8_2:12407975-12407994 | None:intergenic | 35.0% | |
| ! | GGGTTTGAAGTTTCATTTCA+TGG | - | chr8_2:12407987-12408006 | Msa1234740:CDS | 35.0% |
| GATTATGGTGCAGATATACA+CGG | - | chr8_2:12408037-12408056 | Msa1234740:CDS | 35.0% | |
| GTAAGCAGTAAGATGGAAAT+GGG | + | chr8_2:12408158-12408177 | None:intergenic | 35.0% | |
| TGTAAGCAGTAAGATGGAAA+TGG | + | chr8_2:12408159-12408178 | None:intergenic | 35.0% | |
| AATGATCGATATGTTCGACT+AGG | - | chr8_2:12408190-12408209 | Msa1234740:intron | 35.0% | |
| !! | TAGTGTTGAGGTTTTTGTTG+CGG | + | chr8_2:12408280-12408299 | None:intergenic | 35.0% |
| GAGAAACTAAGATAGTGTTG+AGG | + | chr8_2:12408292-12408311 | None:intergenic | 35.0% | |
| TCAGATAAAAAAGGAAACGG+GGG | + | chr8_2:12408539-12408558 | None:intergenic | 35.0% | |
| ACTATTGTAAAACCTTGCAG+TGG | + | chr8_2:12408935-12408954 | None:intergenic | 35.0% | |
| ! | ATTTAAACTTTGGGGAGAGT+TGG | + | chr8_2:12409049-12409068 | Msa1234750:intron | 35.0% |
| TAAAGGACCAACTAAATTGC+AGG | + | chr8_2:12409151-12409170 | Msa1234750:intron | 35.0% | |
| ! | TCTGTGACATTGTTTGAGTT+GGG | + | chr8_2:12409366-12409385 | Msa1234750:intron | 35.0% |
| ! | ATGGGTTTCTTCATGTTTTC+TGG | + | chr8_2:12409389-12409408 | Msa1234750:intron | 35.0% |
| TGTTCTGGTCTATTCTATTG+TGG | - | chr8_2:12409682-12409701 | Msa1234740:intron | 35.0% | |
| TATTGTGGTCTGATCTAGTA+TGG | - | chr8_2:12409697-12409716 | Msa1234740:intron | 35.0% | |
| ATTGTGGTCTGATCTAGTAT+GGG | - | chr8_2:12409698-12409717 | Msa1234740:intron | 35.0% | |
| TGGTCAGGAAATACCATAAA+CGG | - | chr8_2:12409916-12409935 | Msa1234740:intron | 35.0% | |
| AGGAAATACCATAAACGGAT+AGG | - | chr8_2:12409921-12409940 | Msa1234740:intron | 35.0% | |
| TGTATATGTAAGTGAAGGGA+TGG | - | chr8_2:12410050-12410069 | Msa1234740:intron | 35.0% | |
| GTATATGTAAGTGAAGGGAT+GGG | - | chr8_2:12410051-12410070 | Msa1234740:intron | 35.0% | |
| CATCACTTCAGTGCTTAATA+TGG | + | chr8_2:12410087-12410106 | Msa1234750:intron | 35.0% | |
| TGCAGATATACACGGAGAAT+TGG | - | chr8_2:12408045-12408064 | Msa1234740:CDS | 40.0% | |
| GCAGATATACACGGAGAATT+GGG | - | chr8_2:12408046-12408065 | Msa1234740:CDS | 40.0% | |
| TTTACGTGCCCAAAGATAAC+TGG | - | chr8_2:12408114-12408133 | Msa1234740:CDS | 40.0% | |
| ! | TCAGGTTGTAAGCAGTAAGA+TGG | + | chr8_2:12408165-12408184 | None:intergenic | 40.0% |
| GCAAAACGTAGTTACCTTGA+CGG | - | chr8_2:12408836-12408855 | Msa1234740:intron | 40.0% | |
| CAAAACGTAGTTACCTTGAC+GGG | - | chr8_2:12408837-12408856 | Msa1234740:intron | 40.0% | |
| !! | GGGCTTGAACTTTGAGATTA+AGG | - | chr8_2:12408857-12408876 | Msa1234740:intron | 40.0% |
| ! | GTAATTTTCCATCCACTGCA+AGG | - | chr8_2:12408920-12408939 | Msa1234740:intron | 40.0% |
| TTGTAAAACCTTGCAGTGGA+TGG | + | chr8_2:12408931-12408950 | None:intergenic | 40.0% | |
| GAAATCAGGTTAACTCGCTT+AGG | - | chr8_2:12409077-12409096 | Msa1234740:intron | 40.0% | |
| GAACAAGCCTGCAATTTAGT+TGG | - | chr8_2:12409141-12409160 | Msa1234740:intron | 40.0% | |
| GTCTGTGACATTGTTTGAGT+TGG | + | chr8_2:12409367-12409386 | Msa1234750:intron | 40.0% | |
| CATTGCAAACTTGCAACGAT+GGG | + | chr8_2:12409407-12409426 | Msa1234750:intron | 40.0% | |
| TCATTGCAAACTTGCAACGA+TGG | + | chr8_2:12409408-12409427 | Msa1234750:intron | 40.0% | |
| AGAGCTAGGTTTCAACTCAT+CGG | + | chr8_2:12409465-12409484 | Msa1234750:intron | 40.0% | |
| CTAAATTTAGCTACAACGGG+AGG | - | chr8_2:12409491-12409510 | Msa1234740:intron | 40.0% | |
| GATCTAGTATGGGTTTAAGC+TGG | - | chr8_2:12409708-12409727 | Msa1234740:intron | 40.0% | |
| !! | AAAAAGGGGTTTTGATGGTC+AGG | - | chr8_2:12409901-12409920 | Msa1234740:intron | 40.0% |
| GAAGCAATCCTATCCGTTTA+TGG | + | chr8_2:12409932-12409951 | Msa1234750:intron | 40.0% | |
| TAGCTCGATATGTACCTACT+TGG | - | chr8_2:12410196-12410215 | Msa1234740:intron | 40.0% | |
| GATATGTACCTACTTGGAGA+GGG | - | chr8_2:12410202-12410221 | Msa1234740:intron | 40.0% | |
| ATGAATCCATCACGTGTTCT+TGG | - | chr8_2:12410249-12410268 | Msa1234740:CDS | 40.0% | |
| ! | TCTTTTTCTGTCAATGCCGA+GGG | - | chr8_2:12410276-12410295 | Msa1234740:CDS | 40.0% |
| ! | AGTTCAAGTCTGAAATCACC+TGG | + | chr8_2:12410327-12410346 | Msa1234750:intron | 40.0% |
| TGCAGATATACACGGAGAAT+TGG | - | chr8_2:12408045-12408064 | Msa1234740:CDS | 40.0% | |
| GCAGATATACACGGAGAATT+GGG | - | chr8_2:12408046-12408065 | Msa1234740:CDS | 40.0% | |
| TTTACGTGCCCAAAGATAAC+TGG | - | chr8_2:12408114-12408133 | Msa1234740:CDS | 40.0% | |
| ! | TCAGGTTGTAAGCAGTAAGA+TGG | + | chr8_2:12408165-12408184 | None:intergenic | 40.0% |
| GCAAAACGTAGTTACCTTGA+CGG | - | chr8_2:12408836-12408855 | Msa1234740:intron | 40.0% | |
| CAAAACGTAGTTACCTTGAC+GGG | - | chr8_2:12408837-12408856 | Msa1234740:intron | 40.0% | |
| !! | GGGCTTGAACTTTGAGATTA+AGG | - | chr8_2:12408857-12408876 | Msa1234740:intron | 40.0% |
| ! | GTAATTTTCCATCCACTGCA+AGG | - | chr8_2:12408920-12408939 | Msa1234740:intron | 40.0% |
| TTGTAAAACCTTGCAGTGGA+TGG | + | chr8_2:12408931-12408950 | None:intergenic | 40.0% | |
| GAAATCAGGTTAACTCGCTT+AGG | - | chr8_2:12409077-12409096 | Msa1234740:intron | 40.0% | |
| GAACAAGCCTGCAATTTAGT+TGG | - | chr8_2:12409141-12409160 | Msa1234740:intron | 40.0% | |
| GTCTGTGACATTGTTTGAGT+TGG | + | chr8_2:12409367-12409386 | Msa1234750:intron | 40.0% | |
| CATTGCAAACTTGCAACGAT+GGG | + | chr8_2:12409407-12409426 | Msa1234750:intron | 40.0% | |
| TCATTGCAAACTTGCAACGA+TGG | + | chr8_2:12409408-12409427 | Msa1234750:intron | 40.0% | |
| AGAGCTAGGTTTCAACTCAT+CGG | + | chr8_2:12409465-12409484 | Msa1234750:intron | 40.0% | |
| CTAAATTTAGCTACAACGGG+AGG | - | chr8_2:12409491-12409510 | Msa1234740:intron | 40.0% | |
| GATCTAGTATGGGTTTAAGC+TGG | - | chr8_2:12409708-12409727 | Msa1234740:intron | 40.0% | |
| !! | AAAAAGGGGTTTTGATGGTC+AGG | - | chr8_2:12409901-12409920 | Msa1234740:intron | 40.0% |
| GAAGCAATCCTATCCGTTTA+TGG | + | chr8_2:12409932-12409951 | Msa1234750:intron | 40.0% | |
| TAGCTCGATATGTACCTACT+TGG | - | chr8_2:12410196-12410215 | Msa1234740:intron | 40.0% | |
| GATATGTACCTACTTGGAGA+GGG | - | chr8_2:12410202-12410221 | Msa1234740:intron | 40.0% | |
| ATGAATCCATCACGTGTTCT+TGG | - | chr8_2:12410249-12410268 | Msa1234740:CDS | 40.0% | |
| ! | TCTTTTTCTGTCAATGCCGA+GGG | - | chr8_2:12410276-12410295 | Msa1234740:CDS | 40.0% |
| ! | AGTTCAAGTCTGAAATCACC+TGG | + | chr8_2:12410327-12410346 | Msa1234750:intron | 40.0% |
| GAGAATTGGGTTAACTCACC+TGG | - | chr8_2:12408059-12408078 | Msa1234740:CDS | 45.0% | |
| !!! | CATTCATCTGGTTGGCCTTT+TGG | + | chr8_2:12409433-12409452 | Msa1234750:intron | 45.0% |
| GTTGGGTTCATTCATCTGGT+TGG | + | chr8_2:12409441-12409460 | Msa1234750:intron | 45.0% | |
| GGTTTCAACTCATCGGAGTT+GGG | + | chr8_2:12409458-12409477 | Msa1234750:intron | 45.0% | |
| AGGTTTCAACTCATCGGAGT+TGG | + | chr8_2:12409459-12409478 | Msa1234750:intron | 45.0% | |
| GTATGGGTTTAAGCTGGATC+TGG | - | chr8_2:12409714-12409733 | Msa1234740:intron | 45.0% | |
| !!! | TGCTTGGTTTTGTGCCTTGT+TGG | - | chr8_2:12410020-12410039 | Msa1234740:intron | 45.0% |
| AGTGAAGGGATGGGTATCAT+TGG | - | chr8_2:12410060-12410079 | Msa1234740:intron | 45.0% | |
| TAGAGGAATCTGGTCAATCG+AGG | + | chr8_2:12410178-12410197 | Msa1234750:intron | 45.0% | |
| CATATCGAGCTAGAGGAATC+TGG | + | chr8_2:12410188-12410207 | Msa1234750:intron | 45.0% | |
| GTAGGTACATATCGAGCTAG+AGG | + | chr8_2:12410195-12410214 | Msa1234750:intron | 45.0% | |
| CGATATGTACCTACTTGGAG+AGG | - | chr8_2:12410201-12410220 | Msa1234740:intron | 45.0% | |
| ATAACGTTCCCTCTCCAAGT+AGG | + | chr8_2:12410213-12410232 | Msa1234750:intron | 45.0% | |
| ! | GTCTTTTTCTGTCAATGCCG+AGG | - | chr8_2:12410275-12410294 | Msa1234740:CDS | 45.0% |
| CATTGGGTTCTCACTTCTCA+TGG | + | chr8_2:12410364-12410383 | Msa1234750:intron | 45.0% | |
| GAGAATTGGGTTAACTCACC+TGG | - | chr8_2:12408059-12408078 | Msa1234740:CDS | 45.0% | |
| !!! | CATTCATCTGGTTGGCCTTT+TGG | + | chr8_2:12409433-12409452 | Msa1234750:intron | 45.0% |
| GTTGGGTTCATTCATCTGGT+TGG | + | chr8_2:12409441-12409460 | Msa1234750:intron | 45.0% | |
| GGTTTCAACTCATCGGAGTT+GGG | + | chr8_2:12409458-12409477 | Msa1234750:intron | 45.0% | |
| AGGTTTCAACTCATCGGAGT+TGG | + | chr8_2:12409459-12409478 | Msa1234750:intron | 45.0% | |
| GTATGGGTTTAAGCTGGATC+TGG | - | chr8_2:12409714-12409733 | Msa1234740:intron | 45.0% | |
| !!! | TGCTTGGTTTTGTGCCTTGT+TGG | - | chr8_2:12410020-12410039 | Msa1234740:intron | 45.0% |
| AGTGAAGGGATGGGTATCAT+TGG | - | chr8_2:12410060-12410079 | Msa1234740:intron | 45.0% | |
| TAGAGGAATCTGGTCAATCG+AGG | + | chr8_2:12410178-12410197 | Msa1234750:intron | 45.0% | |
| CATATCGAGCTAGAGGAATC+TGG | + | chr8_2:12410188-12410207 | Msa1234750:intron | 45.0% | |
| GTAGGTACATATCGAGCTAG+AGG | + | chr8_2:12410195-12410214 | Msa1234750:intron | 45.0% | |
| CGATATGTACCTACTTGGAG+AGG | - | chr8_2:12410201-12410220 | Msa1234740:intron | 45.0% | |
| ATAACGTTCCCTCTCCAAGT+AGG | + | chr8_2:12410213-12410232 | Msa1234750:intron | 45.0% | |
| ! | GTCTTTTTCTGTCAATGCCG+AGG | - | chr8_2:12410275-12410294 | Msa1234740:CDS | 45.0% |
| CATTGGGTTCTCACTTCTCA+TGG | + | chr8_2:12410364-12410383 | Msa1234750:intron | 45.0% | |
| GGTTAACTCACCTGGACAGA+TGG | - | chr8_2:12408067-12408086 | Msa1234740:CDS | 50.0% | |
| TAACTCACCTGGACAGATGG+AGG | - | chr8_2:12408070-12408089 | Msa1234740:CDS | 50.0% | |
| GACAGATGGAGGACAACTCA+TGG | - | chr8_2:12408081-12408100 | Msa1234740:CDS | 50.0% | |
| ACTAGCTGACGCAGTTGCAA+TGG | - | chr8_2:12408346-12408365 | Msa1234740:intron | 50.0% | |
| CTCAAAGTTCAAGCCCGTCA+AGG | + | chr8_2:12408853-12408872 | None:intergenic | 50.0% | |
| CGGAGTTGGGTTCATTCATC+TGG | + | chr8_2:12409445-12409464 | Msa1234750:intron | 50.0% | |
| ACTAAAGAGCGACGGATGAC+TGG | + | chr8_2:12409525-12409544 | Msa1234750:intron | 50.0% | |
| TTTAAGCTGGATCTGGCCTC+AGG | - | chr8_2:12409721-12409740 | Msa1234740:intron | 50.0% | |
| ATCTGGCCTCAGGTGATTTG+TGG | - | chr8_2:12409731-12409750 | Msa1234740:intron | 50.0% | |
| ACACCACCACAAATCACCTG+AGG | + | chr8_2:12409740-12409759 | Msa1234750:intron | 50.0% | |
| ! | TCAGGTGATTTGTGGTGGTG+TGG | - | chr8_2:12409739-12409758 | Msa1234740:intron | 50.0% |
| ! | CAGGTGATTTGTGGTGGTGT+GGG | - | chr8_2:12409740-12409759 | Msa1234740:intron | 50.0% |
| ! | AGGTGATTTGTGGTGGTGTG+GGG | - | chr8_2:12409741-12409760 | Msa1234740:intron | 50.0% |
| GACATGCCAAGAACACGTGA+TGG | + | chr8_2:12410258-12410277 | Msa1234750:intron | 50.0% | |
| ! | TTTTCTGTCAATGCCGAGGG+TGG | - | chr8_2:12410279-12410298 | Msa1234740:intron | 50.0% |
| GGTTAACTCACCTGGACAGA+TGG | - | chr8_2:12408067-12408086 | Msa1234740:CDS | 50.0% | |
| TAACTCACCTGGACAGATGG+AGG | - | chr8_2:12408070-12408089 | Msa1234740:CDS | 50.0% | |
| GACAGATGGAGGACAACTCA+TGG | - | chr8_2:12408081-12408100 | Msa1234740:CDS | 50.0% | |
| ACTAGCTGACGCAGTTGCAA+TGG | - | chr8_2:12408346-12408365 | Msa1234740:intron | 50.0% | |
| CTCAAAGTTCAAGCCCGTCA+AGG | + | chr8_2:12408853-12408872 | None:intergenic | 50.0% | |
| CGGAGTTGGGTTCATTCATC+TGG | + | chr8_2:12409445-12409464 | Msa1234750:intron | 50.0% | |
| ACTAAAGAGCGACGGATGAC+TGG | + | chr8_2:12409525-12409544 | Msa1234750:intron | 50.0% | |
| TTTAAGCTGGATCTGGCCTC+AGG | - | chr8_2:12409721-12409740 | Msa1234740:intron | 50.0% | |
| ATCTGGCCTCAGGTGATTTG+TGG | - | chr8_2:12409731-12409750 | Msa1234740:intron | 50.0% | |
| ACACCACCACAAATCACCTG+AGG | + | chr8_2:12409740-12409759 | Msa1234750:intron | 50.0% | |
| ! | TCAGGTGATTTGTGGTGGTG+TGG | - | chr8_2:12409739-12409758 | Msa1234740:intron | 50.0% |
| ! | CAGGTGATTTGTGGTGGTGT+GGG | - | chr8_2:12409740-12409759 | Msa1234740:intron | 50.0% |
| ! | AGGTGATTTGTGGTGGTGTG+GGG | - | chr8_2:12409741-12409760 | Msa1234740:intron | 50.0% |
| GACATGCCAAGAACACGTGA+TGG | + | chr8_2:12410258-12410277 | Msa1234750:intron | 50.0% | |
| ! | TTTTCTGTCAATGCCGAGGG+TGG | - | chr8_2:12410279-12410298 | Msa1234740:intron | 50.0% |
| GAGTTGTCCTCCATCTGTCC+AGG | + | chr8_2:12408080-12408099 | None:intergenic | 55.0% | |
| CTGCGTCAGCTAGTAGAGAC+TGG | + | chr8_2:12408340-12408359 | None:intergenic | 55.0% | |
| ! | TGGCCTCAGGTGATTTGTGG+TGG | - | chr8_2:12409734-12409753 | Msa1234740:intron | 55.0% |
| ! | TGATTTGTGGTGGTGTGGGG+TGG | - | chr8_2:12409744-12409763 | Msa1234740:intron | 55.0% |
| CTGGTCCAGATCTAGCACCT+GGG | + | chr8_2:12410308-12410327 | Msa1234750:intron | 55.0% | |
| GAGTTGTCCTCCATCTGTCC+AGG | + | chr8_2:12408080-12408099 | None:intergenic | 55.0% | |
| CTGCGTCAGCTAGTAGAGAC+TGG | + | chr8_2:12408340-12408359 | None:intergenic | 55.0% | |
| ! | TGGCCTCAGGTGATTTGTGG+TGG | - | chr8_2:12409734-12409753 | Msa1234740:intron | 55.0% |
| ! | TGATTTGTGGTGGTGTGGGG+TGG | - | chr8_2:12409744-12409763 | Msa1234740:intron | 55.0% |
| CTGGTCCAGATCTAGCACCT+GGG | + | chr8_2:12410308-12410327 | Msa1234750:intron | 55.0% | |
| GAGCGACGGATGACTGGACT+GGG | + | chr8_2:12409519-12409538 | Msa1234750:intron | 60.0% | |
| AGAGCGACGGATGACTGGAC+TGG | + | chr8_2:12409520-12409539 | Msa1234750:intron | 60.0% | |
| GGTGTCCCAGGTGCTAGATC+TGG | - | chr8_2:12410300-12410319 | Msa1234740:intron | 60.0% | |
| CCTGGTCCAGATCTAGCACC+TGG | + | chr8_2:12410309-12410328 | Msa1234750:intron | 60.0% | |
| CCAGGTGCTAGATCTGGACC+AGG | - | chr8_2:12410306-12410325 | Msa1234740:intron | 60.0% | |
| GAGCGACGGATGACTGGACT+GGG | + | chr8_2:12409519-12409538 | Msa1234750:intron | 60.0% | |
| AGAGCGACGGATGACTGGAC+TGG | + | chr8_2:12409520-12409539 | Msa1234750:intron | 60.0% | |
| GGTGTCCCAGGTGCTAGATC+TGG | - | chr8_2:12410300-12410319 | Msa1234740:intron | 60.0% | |
| CCTGGTCCAGATCTAGCACC+TGG | + | chr8_2:12410309-12410328 | Msa1234750:intron | 60.0% | |
| CCAGGTGCTAGATCTGGACC+AGG | - | chr8_2:12410306-12410325 | Msa1234740:intron | 60.0% | |
| ! | TGTGGTGGTGTGGGGTGGTG+CGG | - | chr8_2:12409749-12409768 | Msa1234740:intron | 65.0% |
| TGGTGTGGGGTGGTGCGGTA+CGG | - | chr8_2:12409754-12409773 | Msa1234740:intron | 65.0% | |
| AATGCCGAGGGTGGTGTCCC+AGG | - | chr8_2:12410288-12410307 | Msa1234740:intron | 65.0% | |
| AGCACCTGGGACACCACCCT+CGG | + | chr8_2:12410295-12410314 | Msa1234750:intron | 65.0% | |
| ! | TGTGGTGGTGTGGGGTGGTG+CGG | - | chr8_2:12409749-12409768 | Msa1234740:intron | 65.0% |
| TGGTGTGGGGTGGTGCGGTA+CGG | - | chr8_2:12409754-12409773 | Msa1234740:intron | 65.0% | |
| AATGCCGAGGGTGGTGTCCC+AGG | - | chr8_2:12410288-12410307 | Msa1234740:intron | 65.0% | |
| AGCACCTGGGACACCACCCT+CGG | + | chr8_2:12410295-12410314 | Msa1234750:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 12407958 | 12410389 | 12407958 | ID=Msa1234740;Name=Msa1234740 |
| chr8_2 | mRNA | 12407958 | 12410389 | 12407958 | ID=Msa1234740-mRNA-1;Parent=Msa1234740;Name=Msa1234740-mRNA-1;_AED=0.18;_eAED=0.33;_QI=0|0|0|1|0|0.33|3|0|110 |
| chr8_2 | exon | 12410327 | 12410389 | 12410327 | ID=Msa1234740-mRNA-1:exon:4818;Parent=Msa1234740-mRNA-1 |
| chr8_2 | exon | 12410229 | 12410297 | 12410229 | ID=Msa1234740-mRNA-1:exon:4817;Parent=Msa1234740-mRNA-1 |
| chr8_2 | exon | 12407958 | 12408158 | 12407958 | ID=Msa1234740-mRNA-1:exon:4816;Parent=Msa1234740-mRNA-1 |
| chr8_2 | CDS | 12410327 | 12410389 | 12410327 | ID=Msa1234740-mRNA-1:cds;Parent=Msa1234740-mRNA-1 |
| chr8_2 | CDS | 12410229 | 12410297 | 12410229 | ID=Msa1234740-mRNA-1:cds;Parent=Msa1234740-mRNA-1 |
| chr8_2 | CDS | 12407958 | 12408158 | 12407958 | ID=Msa1234740-mRNA-1:cds;Parent=Msa1234740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
