AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1166860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1166860 MtrunA17_Chr7g0268051 100.000 112 0 0 1 112 1 112 2.03e-79 228
Msa1166860 MtrunA17_Chr5g0436331 94.643 112 6 0 1 112 26 137 4.54e-77 223
Msa1166860 MtrunA17_Chr7g0268081 86.667 90 12 0 18 107 10 99 4.03e-53 161
Msa1166860 MtrunA17_Chr7g0268061 86.667 90 12 0 18 107 10 99 4.03e-53 161
Msa1166860 MtrunA17_Chr7g0268071 92.771 83 6 0 17 99 8 90 4.50e-53 161
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1166860 AT1G74270.1 91.964 112 9 0 1 112 1 112 6.92e-74 214
Msa1166860 AT1G07070.1 91.071 112 10 0 1 112 1 112 7.72e-74 214
Msa1166860 AT3G55750.1 87.387 111 14 0 2 112 1 111 5.18e-71 207
Msa1166860 AT1G41880.1 86.486 111 15 0 2 112 1 111 7.87e-71 207
Msa1166860 AT1G41880.2 86.486 111 15 0 2 112 1 111 7.87e-71 207

Find 75 sgRNAs with CRISPR-Local

Find 525 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTAATCCGTGTCGGGATTT+TGG 0.107146 7_4:+59016348 Msa1166860:five_prime_UTR
TGTTTACATATTTGAAAGTT+TGG 0.192364 7_4:+59016247 None:intergenic
AGGAAGATTTGATTTGAATT+TGG 0.236788 7_4:-59017721 None:intergenic
TGGTGTTCACTCCTTCAATT+TGG 0.242520 7_4:-59017563 None:intergenic
GTAAATTATTACCATTGATT+TGG 0.266957 7_4:-59017745 None:intergenic
CCAAAATCCCGACACGGATT+AGG 0.313817 7_4:-59016348 None:intergenic
GTTTACATATTTGAAAGTTT+GGG 0.342664 7_4:+59016248 None:intergenic
TAAATTATTACCATTGATTT+GGG 0.343670 7_4:-59017744 None:intergenic
AGATGGTTTGATATCTAATA+TGG 0.347646 7_4:-59024020 Msa1166870:intron
TTATGCTTCATTATATGTAT+AGG 0.347864 7_4:+59024214 Msa1166860:three_prime_UTR
CAAAATCCCGACACGGATTA+GGG 0.352631 7_4:-59016347 None:intergenic
GCCCCATATGCAACGGTAAT+GGG 0.353096 7_4:-59017658 None:intergenic
GAACCCATTACCGTTGCATA+TGG 0.373177 7_4:+59017655 Msa1166860:CDS
GGCTTCTATCATGGACGGTT+TGG 0.378675 7_4:-59016300 None:intergenic
GGTTTACCTCATATGTTACT+TGG 0.390121 7_4:-59017867 None:intergenic
CCAGAGATGTGTTTGGGTAC+TGG 0.398125 7_4:-59017539 None:intergenic
TTGGTATGCCGGCAAGAAAA+TGG 0.403183 7_4:+59017599 Msa1166860:CDS
ATTTGGACCAGAGATGTGTT+TGG 0.405595 7_4:-59017546 None:intergenic
GACGTCAAGGAGAGCGTGTC+AGG 0.412439 7_4:+59016402 Msa1166860:CDS
TTTGGACCAGAGATGTGTTT+GGG 0.422500 7_4:-59017545 None:intergenic
GGTTGCAGATTCAGGTGATA+AGG 0.430364 7_4:+59018669 Msa1166860:intron
CTGTTTAGACAGTTCAATGA+TGG 0.441400 7_4:+59018768 Msa1166860:three_prime_UTR
TGCCCCATATGCAACGGTAA+TGG 0.448613 7_4:-59017659 None:intergenic
AACCCATTACCGTTGCATAT+GGG 0.460048 7_4:+59017656 Msa1166860:CDS
ACATCTCTGGTCCAAATTGA+AGG 0.462436 7_4:+59017552 Msa1166860:CDS
GCCATTTGCGATAGTGAAGA+TGG 0.464677 7_4:-59024037 Msa1166870:intron
CAACACTGTGTGTGTGGACT+TGG 0.470471 7_4:+59018835 Msa1166860:three_prime_UTR
TACGTGAGGGGTACAATCCT+TGG 0.470557 7_4:+59017389 Msa1166860:CDS
AATGAAGCATAATTTATCAA+TGG 0.474262 7_4:-59024203 Msa1166870:intron
TTCTGGGCTTCTATCATGGA+CGG 0.481290 7_4:-59016305 None:intergenic
GTTTGCTGCTGCTGTGAAGA+TGG 0.484344 7_4:+59016373 Msa1166860:exon
ACCATCTTCACTATCGCAAA+TGG 0.493545 7_4:+59024036 Msa1166860:three_prime_UTR
GTACAATCCTTGGATACAAA+AGG 0.498010 7_4:+59017399 Msa1166860:CDS
ATAAAACCCTAATCCGTGTC+GGG 0.505300 7_4:+59016341 Msa1166860:five_prime_UTR
ATACCAAGCTACCTCTTCCT+TGG 0.508204 7_4:-59017583 None:intergenic
GAAGAGGTAGCTTGGTATGC+CGG 0.510952 7_4:+59017588 Msa1166860:CDS
GGTTCCGTTCTTCTTCACCT+TGG 0.512346 7_4:-59017637 None:intergenic
GTTTACCTCATATGTTACTT+GGG 0.516767 7_4:-59017866 None:intergenic
AAATCTTCCTCCCAAATCAA+TGG 0.516979 7_4:+59017734 Msa1166860:CDS
GTTTGGGTACTGGTTTACTT+TGG 0.518411 7_4:-59017529 None:intergenic
GATAAGGTCAGCAGGATTGT+GGG 0.519087 7_4:+59018685 Msa1166860:three_prime_UTR
TGATAAGGTCAGCAGGATTG+TGG 0.520862 7_4:+59018684 Msa1166860:three_prime_UTR
ACCCATTACCGTTGCATATG+GGG 0.524799 7_4:+59017657 Msa1166860:CDS
GCATATGGGGCAAGGTTACA+AGG 0.526923 7_4:+59017670 Msa1166860:CDS
CCAGTACCCAAACACATCTC+TGG 0.530530 7_4:+59017539 Msa1166860:CDS
AATGTTGTTTGCCACAGTAT+TGG 0.531465 7_4:+59018791 Msa1166860:three_prime_UTR
TTGTATTAGGCTTTACGTGA+GGG 0.535618 7_4:+59017376 Msa1166860:intron
AGGAGTGAACACCAAGGAAG+AGG 0.555068 7_4:+59017572 Msa1166860:CDS
ATTCAGGTGATAAGGTCAGC+AGG 0.555651 7_4:+59018677 Msa1166860:three_prime_UTR
ATGTACCCAAGTAACATATG+AGG 0.563414 7_4:+59017861 Msa1166860:CDS
AAAATCTCAGACATTGTTGG+TGG 0.564066 7_4:+59024159 Msa1166860:three_prime_UTR
ATAGAAGCCCAGAAAACCTC+GGG 0.571838 7_4:+59016314 Msa1166860:five_prime_UTR
GGCATATATCTACAAGGCCA+AGG 0.574061 7_4:+59017620 Msa1166860:CDS
AATAAAACCCTAATCCGTGT+CGG 0.576123 7_4:+59016340 Msa1166860:five_prime_UTR
GGCAAGGTTACAAGGCCTCA+TGG 0.577972 7_4:+59017678 Msa1166860:CDS
AAAAGAAACAACAATCCTTG+AGG 0.584495 7_4:-59018723 None:intergenic
TTTGTATTAGGCTTTACGTG+AGG 0.589429 7_4:+59017375 Msa1166860:intron
TTACCGTTGCATATGGGGCA+AGG 0.593071 7_4:+59017662 Msa1166860:CDS
ACACCAAGGAAGAGGTAGCT+TGG 0.593143 7_4:+59017580 Msa1166860:CDS
TGTATTAGGCTTTACGTGAG+GGG 0.606295 7_4:+59017377 Msa1166860:intron
AAGATGGTGAAGGGACGTCA+AGG 0.609822 7_4:+59016389 Msa1166860:exon
TGCTGCTGTGAAGATGGTGA+AGG 0.610958 7_4:+59016379 Msa1166860:exon
ATTATTACCATTGATTTGGG+AGG 0.614066 7_4:-59017741 None:intergenic
TATATTCAACACTGTGTGTG+TGG 0.615858 7_4:+59018829 Msa1166860:three_prime_UTR
GATAGAAGCCCAGAAAACCT+CGG 0.628390 7_4:+59016313 Msa1166860:five_prime_UTR
AAGGCCAAGGTGAAGAAGAA+CGG 0.630167 7_4:+59017633 Msa1166860:CDS
GAAAATGGCATATATCTACA+AGG 0.630318 7_4:+59017614 Msa1166860:CDS
GCTGCTGTGAAGATGGTGAA+GGG 0.632435 7_4:+59016380 Msa1166860:exon
AATAGAATGTGAGTAGACAA+AGG 0.638421 7_4:-59024095 Msa1166870:intron
TAACCTTGCCCCATATGCAA+CGG 0.648972 7_4:-59017665 None:intergenic
TTCATTAACAGCCAATACTG+TGG 0.653374 7_4:-59018802 None:intergenic
ACAAGGCCTCATGGTAACAG+TGG 0.683556 7_4:+59017687 Msa1166860:CDS
AAACGCCCAAAATCCCGACA+CGG 0.728606 7_4:-59016354 None:intergenic
ACAATACCACTGTTACCATG+AGG 0.737809 7_4:-59017693 None:intergenic
AATTGAAGGAGTGAACACCA+AGG 0.776962 7_4:+59017566 Msa1166860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTGCAATTTTATAAAT+AGG + chr7_4:59018574-59018593 Msa1166860:intron 10.0%
!!! ATTTTGCAATTTTATAAATA+GGG + chr7_4:59018575-59018594 Msa1166860:intron 10.0%
!!! ATTTTTTTTGCTTATAATTT+GGG - chr7_4:59019511-59019530 None:intergenic 10.0%
!! TTGAAAAAACATATAAAAAT+TGG - chr7_4:59019567-59019586 Msa1166870:three_prime_UTR 10.0%
!!! TCGAATTTTATAATTTTTTT+AGG + chr7_4:59021422-59021441 Msa1166860:intron 10.0%
!!! CGAATTTTATAATTTTTTTA+GGG + chr7_4:59021423-59021442 Msa1166860:intron 10.0%
!! GAATTCAAATAATTAAAATT+CGG - chr7_4:59022545-59022564 Msa1166870:intron 10.0%
!! TTGTATTTCATATAAATAAA+TGG + chr7_4:59022647-59022666 Msa1166860:intron 10.0%
!!! AACTACTTTTTTATGAAATT+TGG - chr7_4:59016274-59016293 None:intergenic 15.0%
!! GATGAAAATACAAATAAAAA+TGG - chr7_4:59016443-59016462 None:intergenic 15.0%
!!! TATCATTGTTTTAATTCATT+TGG + chr7_4:59016497-59016516 Msa1166860:intron 15.0%
!! TATAGAAAAGGAAAAAATAA+AGG - chr7_4:59016908-59016927 None:intergenic 15.0%
!!! TAAAGCTATTTTTATAGAAA+AGG - chr7_4:59016920-59016939 None:intergenic 15.0%
!!! TTTTGGTTTTATTTTTGTTA+GGG + chr7_4:59017149-59017168 Msa1166860:intron 15.0%
!!! TAAATTATTACCATTGATTT+GGG - chr7_4:59017747-59017766 None:intergenic 15.0%
!! TAATAAGAATAAAAATGTGT+TGG - chr7_4:59017770-59017789 None:intergenic 15.0%
!!! AATTTTGCAATTTTTTAAAG+AGG + chr7_4:59018463-59018482 Msa1166860:intron 15.0%
!!! ATTTTGCAATTTTTTAAAGA+GGG + chr7_4:59018464-59018483 Msa1166860:intron 15.0%
!!! GATTTTTTTTGCTTATAATT+TGG - chr7_4:59019512-59019531 None:intergenic 15.0%
!!! GATGTAAAAATAATTTTCAT+TGG - chr7_4:59019670-59019689 Msa1166870:three_prime_UTR 15.0%
!!! TTTTTTCTTTTCTTATAATC+CGG + chr7_4:59019765-59019784 Msa1166860:intron 15.0%
!!! GAAAAGAATAAATTTTTGTT+AGG - chr7_4:59022116-59022135 Msa1166870:intron 15.0%
!!! CAAAAATTTATTCTTTTCAA+AGG + chr7_4:59022118-59022137 Msa1166860:intron 15.0%
!! TCTTACTTAATATTAATCTA+AGG + chr7_4:59023199-59023218 Msa1166860:intron 15.0%
!! TAATTAATGAAATCATATAG+TGG - chr7_4:59023502-59023521 Msa1166870:intron 15.0%
!! GATTTCATTAATTAATTTAG+TGG + chr7_4:59023508-59023527 Msa1166860:intron 15.0%
!!! ATTTTAGACAAGATAATTAT+TGG + chr7_4:59023826-59023845 Msa1166860:intron 15.0%
!! TTTCATAAAAAAGTAGTTAC+TGG + chr7_4:59016276-59016295 Msa1166860:five_prime_UTR 20.0%
!! TTCATAAAAAAGTAGTTACT+GGG + chr7_4:59016277-59016296 Msa1166860:five_prime_UTR 20.0%
!! AATATAGCTGCTAAAAAATT+GGG - chr7_4:59017040-59017059 None:intergenic 20.0%
!! AAATATAGCTGCTAAAAAAT+TGG - chr7_4:59017041-59017060 None:intergenic 20.0%
!!! CTTTTGGTTTTATTTTTGTT+AGG + chr7_4:59017148-59017167 Msa1166860:intron 20.0%
!!! ATTTTTGTTAGGGATTAAAT+TGG + chr7_4:59017159-59017178 Msa1166860:intron 20.0%
!!! TTTTTGTTAGGGATTAAATT+GGG + chr7_4:59017160-59017179 Msa1166860:intron 20.0%
!! AAAAGACACAAAAACATATT+TGG - chr7_4:59017262-59017281 None:intergenic 20.0%
!! TTTCTTGTTCAATTTGTATT+AGG + chr7_4:59017363-59017382 Msa1166860:intron 20.0%
!!! CATCTGTTTTATTTTATGTT+TGG + chr7_4:59017438-59017457 Msa1166860:intron 20.0%
!!! GTAAATTATTACCATTGATT+TGG - chr7_4:59017748-59017767 None:intergenic 20.0%
!! TTCATATTTGTAAAACTTGA+AGG - chr7_4:59018041-59018060 None:intergenic 20.0%
!! TAGAAACATAGTTTATTGTT+TGG + chr7_4:59018339-59018358 Msa1166860:intron 20.0%
!!! CACTGTATTTTATTAAGAAT+CGG + chr7_4:59018966-59018985 Msa1166860:intron 20.0%
!!! ACTGTATTTTATTAAGAATC+GGG + chr7_4:59018967-59018986 Msa1166860:intron 20.0%
!!! GTCTTTTTTGCTTATAATTT+GGG - chr7_4:59019545-59019564 None:intergenic 20.0%
!!! CAAAAAATTATCTTTTCCAA+AGG + chr7_4:59019584-59019603 Msa1166860:intron 20.0%
!!! TTTTTCTTTTCTTATAATCC+GGG + chr7_4:59019766-59019785 Msa1166860:intron 20.0%
!!! AAAACTCAACCTTTTTTTTT+TGG - chr7_4:59019976-59019995 Msa1166870:intron 20.0%
!!! TTCAAAAATGAGTTTTTTGT+TGG + chr7_4:59020064-59020083 Msa1166860:intron 20.0%
!! ATACCTACAAATACTAAATT+AGG + chr7_4:59020201-59020220 Msa1166860:intron 20.0%
!! TACCTACAAATACTAAATTA+GGG + chr7_4:59020202-59020221 Msa1166860:intron 20.0%
!! GAAAATATATTATTGCTAGT+CGG - chr7_4:59020370-59020389 Msa1166870:intron 20.0%
!!! GCAATAATATATTTTCTTGA+AGG + chr7_4:59020374-59020393 Msa1166860:intron 20.0%
!! AAAGTCATAAACAATACAAA+AGG - chr7_4:59020820-59020839 Msa1166870:intron 20.0%
!! CATGGCAAATATATATAAAA+AGG - chr7_4:59020865-59020884 Msa1166870:intron 20.0%
!!! TGAAATTTTGAGAGAAAAAA+TGG - chr7_4:59021154-59021173 Msa1166870:intron 20.0%
!! CAATATAACTTCATTATAAC+AGG - chr7_4:59021383-59021402 Msa1166870:intron 20.0%
!!! AATTTTTTTAGGGTTTGTTT+AGG + chr7_4:59021433-59021452 Msa1166860:intron 20.0%
!!! CAAGAATTTAATCTTTTCAA+AGG - chr7_4:59022010-59022029 Msa1166870:intron 20.0%
!! GAAAAGATTAAATTCTTGTT+AGG + chr7_4:59022012-59022031 Msa1166860:intron 20.0%
!! ATAATTATCACATTACATTC+CGG - chr7_4:59022486-59022505 Msa1166870:intron 20.0%
!! TACTTAATATTAATCTAAGG+TGG + chr7_4:59023202-59023221 Msa1166860:intron 20.0%
!! AGCTTCATTAATTAATTTAG+TGG + chr7_4:59023439-59023458 Msa1166860:intron 20.0%
!! ATAGACTTATGAGTTAATAA+TGG - chr7_4:59023990-59024009 Msa1166870:intron 20.0%
!! AATGAAGCATAATTTATCAA+TGG - chr7_4:59024206-59024225 Msa1166870:intron 20.0%
!! TTATGCTTCATTATATGTAT+AGG + chr7_4:59024214-59024233 Msa1166860:three_prime_UTR 20.0%
! AAAAAAAAAGAGAGAGAAGT+AGG - chr7_4:59016804-59016823 None:intergenic 25.0%
! TAGTCCAGTTATAAAAATGT+CGG - chr7_4:59017097-59017116 None:intergenic 25.0%
!!! AGGAAGATTTGATTTGAATT+TGG - chr7_4:59017724-59017743 None:intergenic 25.0%
!!! CTATATATGGTTCTAAATCA+TGG + chr7_4:59018264-59018283 Msa1166860:intron 25.0%
! ACATTAACGTTGTTTATTCT+AGG - chr7_4:59018395-59018414 None:intergenic 25.0%
! TAACTGTTACATTGGATATT+TGG + chr7_4:59018648-59018667 Msa1166860:intron 25.0%
!!! ATGATTTTTTAGTAACCTCA+AGG + chr7_4:59018708-59018727 Msa1166860:three_prime_UTR 25.0%
! GTAAATGAAATGAATATACG+TGG + chr7_4:59018929-59018948 Msa1166860:intron 25.0%
!! CATTGACATTGCATTTTAAA+AGG + chr7_4:59019285-59019304 Msa1166860:intron 25.0%
! TTAATGTGCATGATATTCTT+CGG - chr7_4:59019326-59019345 None:intergenic 25.0%
!! ATGCATTTTAAACGATACTT+TGG + chr7_4:59019385-59019404 Msa1166860:intron 25.0%
!! ATTTTAAACGATACTTTGGT+TGG + chr7_4:59019389-59019408 Msa1166860:intron 25.0%
!! TTTTTGCTTATAATTTGGGA+GGG - chr7_4:59019507-59019526 None:intergenic 25.0%
!!! TTTTTTGCTTATAATTTGGG+AGG - chr7_4:59019508-59019527 None:intergenic 25.0%
!!! GGTCTTTTTTGCTTATAATT+TGG - chr7_4:59019546-59019565 None:intergenic 25.0%
!!! CTTTGCATTTAATTTTCCTT+TGG - chr7_4:59019603-59019622 Msa1166870:three_prime_UTR 25.0%
!! TTTGGGATAAAATATATCCA+AGG - chr7_4:59020000-59020019 Msa1166870:intron 25.0%
!!! GCATGTATTTTTTTCTAAGT+TGG + chr7_4:59020115-59020134 Msa1166860:intron 25.0%
!!! GTATTTTTTTCTAAGTTGGT+TGG + chr7_4:59020119-59020138 Msa1166860:intron 25.0%
! AAAAAAGATTAAGAACAGTC+AGG - chr7_4:59020291-59020310 Msa1166870:intron 25.0%
!!! CTGTTCTTAATCTTTTTTCT+TGG + chr7_4:59020293-59020312 Msa1166860:intron 25.0%
!! TTTTTCTTGGTATTCCTTAA+AGG + chr7_4:59020306-59020325 Msa1166860:intron 25.0%
! TATAAGACAAAAAATACCCT+GGG - chr7_4:59020412-59020431 Msa1166870:intron 25.0%
! ATATAAGACAAAAAATACCC+TGG - chr7_4:59020413-59020432 Msa1166870:intron 25.0%
!! GGAAGAAATTTTGAATGATT+TGG - chr7_4:59021197-59021216 Msa1166870:intron 25.0%
!!! AGTTATTTTGTAGATCTGAA+AGG + chr7_4:59021335-59021354 Msa1166860:intron 25.0%
! TAGATCTCTTTAATACACAA+AGG + chr7_4:59022699-59022718 Msa1166860:intron 25.0%
! TTTAATACACAAAGGAAAAG+AGG + chr7_4:59022707-59022726 Msa1166860:intron 25.0%
! AAGAGGTTTATTTCAATGAA+AGG + chr7_4:59022724-59022743 Msa1166860:intron 25.0%
! AATGATAGAAAATGAGAGTA+AGG + chr7_4:59022808-59022827 Msa1166860:intron 25.0%
! GGGAAAAATGTAGAAAAAAT+AGG + chr7_4:59022875-59022894 Msa1166860:intron 25.0%
! GGTTGAATGTTGAAAAAAAT+AGG + chr7_4:59022896-59022915 Msa1166860:intron 25.0%
!! AAAATAGGTTGAATGAATGA+TGG + chr7_4:59022911-59022930 Msa1166860:intron 25.0%
! AGGTAGAATGTAGAAAAAAT+TGG + chr7_4:59022960-59022979 Msa1166860:intron 25.0%
! TGGTTGAATGTAGAAAAAAT+AGG + chr7_4:59022980-59022999 Msa1166860:intron 25.0%
! TTGAATGAATGATGAAAAAG+AGG + chr7_4:59023003-59023022 Msa1166860:intron 25.0%
! ATCATATAGTGGTTGAAAAA+GGG - chr7_4:59023491-59023510 Msa1166870:intron 25.0%
! AATCATATAGTGGTTGAAAA+AGG - chr7_4:59023492-59023511 Msa1166870:intron 25.0%
!! TTTCTCTTTTAGCAAGAAAA+TGG + chr7_4:59023608-59023627 Msa1166860:intron 25.0%
! AAAACACGTTTATCAATCAA+TGG - chr7_4:59023703-59023722 Msa1166870:intron 25.0%
!! ATTGATTGATAAACGTGTTT+TGG + chr7_4:59023702-59023721 Msa1166860:intron 25.0%
!! TATCTTGTCTAAAATTTCTG+TGG - chr7_4:59023821-59023840 Msa1166870:intron 25.0%
!!! CATCATTTATTGAGTTGTTT+TGG + chr7_4:59023877-59023896 Msa1166860:intron 25.0%
! GCAAAAAATAACTAAGTCTA+GGG - chr7_4:59023968-59023987 Msa1166870:intron 25.0%
! AGATGGTTTGATATCTAATA+TGG - chr7_4:59024023-59024042 Msa1166870:intron 25.0%
!!! TCTGAGATTTTTGTTATCTT+TGG - chr7_4:59024150-59024169 Msa1166870:intron 25.0%
ACATTAGCATGCAGTTAATA+AGG + chr7_4:59016544-59016563 Msa1166860:intron 30.0%
CATTAGCATGCAGTTAATAA+GGG + chr7_4:59016545-59016564 Msa1166860:intron 30.0%
AGTCTCACAAAAACTTATGT+TGG - chr7_4:59016697-59016716 None:intergenic 30.0%
!!! ATGCTATGAGCTGTTTTTAT+AGG - chr7_4:59016869-59016888 None:intergenic 30.0%
! ATCACTCCACAAAGTATTAA+GGG - chr7_4:59017001-59017020 None:intergenic 30.0%
!! GTTCAGATTTCATTTTTGTC+AGG - chr7_4:59017067-59017086 None:intergenic 30.0%
ACAAAAATGAAATCTGAACC+TGG + chr7_4:59017068-59017087 Msa1166860:intron 30.0%
AGTCCAGTTATAAAAATGTC+GGG - chr7_4:59017096-59017115 None:intergenic 30.0%
AAAATATTGTGGGACGAAAA+TGG + chr7_4:59017187-59017206 Msa1166860:intron 30.0%
AAATATTGTGGGACGAAAAT+GGG + chr7_4:59017188-59017207 Msa1166860:intron 30.0%
! AAGTTTACCTTTTGTATCCA+AGG - chr7_4:59017409-59017428 None:intergenic 30.0%
! GTTTGGTTTATGAAAATGTC+TGG + chr7_4:59017455-59017474 Msa1166860:intron 30.0%
GAAAATGGCATATATCTACA+AGG + chr7_4:59017614-59017633 Msa1166860:CDS 30.0%
!! ATTATTACCATTGATTTGGG+AGG - chr7_4:59017744-59017763 None:intergenic 30.0%
!!! TTATCTTGACTTTTTGAGTG+TGG + chr7_4:59017806-59017825 Msa1166860:intron 30.0%
! GTTTACCTCATATGTTACTT+GGG - chr7_4:59017869-59017888 None:intergenic 30.0%
!! AAACAATTCAAAAAGCATCC+AGG - chr7_4:59017898-59017917 None:intergenic 30.0%
ACAAAATGCATGAAAAACAC+AGG - chr7_4:59017973-59017992 None:intergenic 30.0%
!! TCATGCATTTTGTCATTTGA+TGG + chr7_4:59017980-59017999 Msa1166860:intron 30.0%
!! CATGCATTTTGTCATTTGAT+GGG + chr7_4:59017981-59018000 Msa1166860:intron 30.0%
!! ATGCATTTTGTCATTTGATG+GGG + chr7_4:59017982-59018001 Msa1166860:intron 30.0%
CATATCTGATCTGAAAAATG+TGG + chr7_4:59018300-59018319 Msa1166860:intron 30.0%
! TTGTTTGGAATTCTATCAGA+AGG + chr7_4:59018354-59018373 Msa1166860:intron 30.0%
ACTCTATCTAACTGTTACAT+TGG + chr7_4:59018640-59018659 Msa1166860:intron 30.0%
AAAAGAAACAACAATCCTTG+AGG - chr7_4:59018726-59018745 None:intergenic 30.0%
!! CTAGATTTTCTTCAAGTTCA+AGG - chr7_4:59018910-59018929 None:intergenic 30.0%
AAATTGTTCCATTCAAACTC+AGG - chr7_4:59019050-59019069 None:intergenic 30.0%
TTGACAGATTCTATCTTGAT+CGG + chr7_4:59019068-59019087 Msa1166860:intron 30.0%
! GACCATATCAAACTTACTTT+TGG + chr7_4:59019858-59019877 Msa1166860:intron 30.0%
GACCAAAAGTAAGTTTGATA+TGG - chr7_4:59019863-59019882 Msa1166870:intron 30.0%
ACATTAAATGTACCATTCTC+AGG - chr7_4:59019923-59019942 Msa1166870:intron 30.0%
! AAAAAGGTTGAGTTTTTCCT+TGG + chr7_4:59019980-59019999 Msa1166860:intron 30.0%
GACCCTAATTTAGTATTTGT+AGG - chr7_4:59020207-59020226 Msa1166870:intron 30.0%
AGAAAAAACTCTCACCTTTA+AGG - chr7_4:59020323-59020342 Msa1166870:intron 30.0%
!!! TAAAGGTGAGAGTTTTTTCT+TGG + chr7_4:59020323-59020342 Msa1166860:intron 30.0%
ATAAGACAAAAAATACCCTG+GGG - chr7_4:59020411-59020430 Msa1166870:intron 30.0%
TACCTTCAAATTTAGTGAGT+CGG + chr7_4:59020465-59020484 Msa1166860:intron 30.0%
CTTAATATTTGGTTGGACTT+GGG + chr7_4:59020488-59020507 Msa1166860:intron 30.0%
TTAATATTTGGTTGGACTTG+GGG + chr7_4:59020489-59020508 Msa1166860:intron 30.0%
AAATTGTTGTATGGTCCTTA+TGG + chr7_4:59020534-59020553 Msa1166860:intron 30.0%
! TATCATGCTGACATCTTTTT+GGG + chr7_4:59020563-59020582 Msa1166860:intron 30.0%
ACATTTGTACTCTAGTTGAT+GGG + chr7_4:59020594-59020613 Msa1166860:intron 30.0%
GTTCATGATCATATATTGTG+TGG - chr7_4:59020668-59020687 Msa1166870:intron 30.0%
! ATCATGAACTCATTTTGTGT+TGG + chr7_4:59020679-59020698 Msa1166860:intron 30.0%
!!! AAGGATTTTTTGTTCCATGT+TGG + chr7_4:59020770-59020789 Msa1166860:intron 30.0%
!!! AGGATTTTTTGTTCCATGTT+GGG + chr7_4:59020771-59020790 Msa1166860:intron 30.0%
TGAATATATCACGAACACAA+CGG - chr7_4:59021087-59021106 Msa1166870:intron 30.0%
TTGTGTTCGTGATATATTCA+AGG + chr7_4:59021087-59021106 Msa1166860:intron 30.0%
TTTGAGAGAAAAAATGGTGA+TGG - chr7_4:59021148-59021167 Msa1166870:intron 30.0%
! AGTGATAACTTGTGATTTAG+TGG - chr7_4:59021218-59021237 Msa1166870:intron 30.0%
!! AGGGTTTGTTTAGGATTTTT+AGG + chr7_4:59021442-59021461 Msa1166860:intron 30.0%
!! GGGTTTGTTTAGGATTTTTA+GGG + chr7_4:59021443-59021462 Msa1166860:intron 30.0%
! ATTGTGTAGATTTGAAGCAA+TGG + chr7_4:59021529-59021548 Msa1166860:intron 30.0%
TTTGAATTACCTCATTTCAG+AGG - chr7_4:59021938-59021957 Msa1166870:intron 30.0%
TTGAATTTACCCAATTTCAG+AGG + chr7_4:59022189-59022208 Msa1166860:intron 30.0%
!! ATTGTCTTACCTCTGAAATT+GGG - chr7_4:59022201-59022220 Msa1166870:intron 30.0%
!! AATTGTCTTACCTCTGAAAT+TGG - chr7_4:59021925-59021944 Msa1166870:intron 30.0%
AGTAAGACAATTGTTGTAGT+TGG - chr7_4:59022246-59022265 Msa1166870:intron 30.0%
!! GGCAATTCAAACTTGTTAAT+CGG + chr7_4:59022274-59022293 Msa1166860:intron 30.0%
CTCTTTCTTCTACAAAATGT+TGG - chr7_4:59022764-59022783 Msa1166870:intron 30.0%
! TGAATGAATGATGGAAAAAG+AGG + chr7_4:59022920-59022939 Msa1166860:intron 30.0%
! AGGTTGAATGATGGAAAAAA+AGG + chr7_4:59022940-59022959 Msa1166860:intron 30.0%
AAAGAGGTTGAAGAATGAAA+AGG + chr7_4:59023019-59023038 Msa1166860:intron 30.0%
AGTAGCTCAATGCAAAATTA+CGG - chr7_4:59023398-59023417 Msa1166870:intron 30.0%
!! CTTAGTCTTAACAACAACTT+TGG - chr7_4:59023421-59023440 Msa1166870:intron 30.0%
!! ATTTAGTGGCTCTAGATAAA+TGG + chr7_4:59023453-59023472 Msa1166860:intron 30.0%
TATGAAGAAACATGAGACAT+TGG - chr7_4:59023562-59023581 Msa1166870:intron 30.0%
ATTGCAAAGTCTCTAATCAT+AGG - chr7_4:59023679-59023698 Msa1166870:intron 30.0%
ACAATAAATTGCAACTTCTC+CGG + chr7_4:59023850-59023869 Msa1166860:intron 30.0%
ACTCAATAAATGATGTTTGC+CGG - chr7_4:59023872-59023891 Msa1166870:intron 30.0%
TAGGGATGTATATATAGGAA+AGG - chr7_4:59023950-59023969 Msa1166870:intron 30.0%
AAGTCTAGGGATGTATATAT+AGG - chr7_4:59023955-59023974 Msa1166870:intron 30.0%
GGCAAAAAATAACTAAGTCT+AGG - chr7_4:59023969-59023988 Msa1166870:intron 30.0%
AATAGAATGTGAGTAGACAA+AGG - chr7_4:59024098-59024117 Msa1166870:intron 30.0%
ACAAAAATCTCAGACATTGT+TGG + chr7_4:59024156-59024175 Msa1166860:three_prime_UTR 30.0%
! TATTATACCCGAGGTTTTCT+GGG - chr7_4:59016324-59016343 None:intergenic 35.0%
! TTATTATACCCGAGGTTTTC+TGG - chr7_4:59016325-59016344 None:intergenic 35.0%
!!! TTAGGGTTTTATTATACCCG+AGG - chr7_4:59016333-59016352 None:intergenic 35.0%
AATAAAACCCTAATCCGTGT+CGG + chr7_4:59016340-59016359 Msa1166860:five_prime_UTR 35.0%
ACTGCATGCTAATGTTTGAA+TGG - chr7_4:59016539-59016558 None:intergenic 35.0%
TCAAATAAGCCAATCCAAAC+AGG - chr7_4:59016665-59016684 None:intergenic 35.0%
CTCACAAAAACTTATGTTGG+TGG - chr7_4:59016694-59016713 None:intergenic 35.0%
! GTTTTTGTGAGACTGTTGTT+TGG + chr7_4:59016703-59016722 Msa1166860:intron 35.0%
AGAACTTGTGAAAATCAGCT+GGG - chr7_4:59016772-59016791 None:intergenic 35.0%
! CAAAGTATTAAGGGCATGTT+TGG - chr7_4:59016992-59017011 None:intergenic 35.0%
AACATGCCCTTAATACTTTG+TGG + chr7_4:59016992-59017011 Msa1166860:intron 35.0%
! CATCACTCCACAAAGTATTA+AGG - chr7_4:59017002-59017021 None:intergenic 35.0%
CTTAATACTTTGTGGAGTGA+TGG + chr7_4:59017000-59017019 Msa1166860:intron 35.0%
ATAGCTGCTAAAAAATTGGG+AGG - chr7_4:59017037-59017056 None:intergenic 35.0%
GTCCAGTTATAAAAATGTCG+GGG - chr7_4:59017095-59017114 None:intergenic 35.0%
TCGCTAGTATGAATATCTCT+GGG + chr7_4:59017122-59017141 Msa1166860:intron 35.0%
AATTGGGTCGCAAAATATTG+TGG + chr7_4:59017176-59017195 Msa1166860:intron 35.0%
ATTGGGTCGCAAAATATTGT+GGG + chr7_4:59017177-59017196 Msa1166860:intron 35.0%
TTTGTATTAGGCTTTACGTG+AGG + chr7_4:59017375-59017394 Msa1166860:intron 35.0%
TTGTATTAGGCTTTACGTGA+GGG + chr7_4:59017376-59017395 Msa1166860:intron 35.0%
GTACAATCCTTGGATACAAA+AGG + chr7_4:59017399-59017418 Msa1166860:CDS 35.0%
AAATGTCTGGTTAGATGCTT+TGG + chr7_4:59017468-59017487 Msa1166860:intron 35.0%
!!! GATATATGCCATTTTCTTGC+CGG - chr7_4:59017610-59017629 None:intergenic 35.0%
AAATCTTCCTCCCAAATCAA+TGG + chr7_4:59017734-59017753 Msa1166860:CDS 35.0%
ATGTACCCAAGTAACATATG+AGG + chr7_4:59017861-59017880 Msa1166860:CDS 35.0%
GGTTTACCTCATATGTTACT+TGG - chr7_4:59017870-59017889 None:intergenic 35.0%
TCTTATACCTCAGAGTTATG+CGG + chr7_4:59018207-59018226 Msa1166860:intron 35.0%
GCTATCAGGAGAACTATATA+TGG + chr7_4:59018251-59018270 Msa1166860:intron 35.0%
TGAAAAATGTGGCAGTTGTA+TGG + chr7_4:59018311-59018330 Msa1166860:intron 35.0%
TATAAATAGGGCTTCTTCTC+TGG + chr7_4:59018587-59018606 Msa1166860:intron 35.0%
CTGTTTAGACAGTTCAATGA+TGG + chr7_4:59018768-59018787 Msa1166860:three_prime_UTR 35.0%
! AATGTTGTTTGCCACAGTAT+TGG + chr7_4:59018791-59018810 Msa1166860:three_prime_UTR 35.0%
TTCATTAACAGCCAATACTG+TGG - chr7_4:59018805-59018824 None:intergenic 35.0%
TATATTCAACACTGTGTGTG+TGG + chr7_4:59018829-59018848 Msa1166860:three_prime_UTR 35.0%
CATTCAAACTCAGGTTAAAG+TGG - chr7_4:59019041-59019060 None:intergenic 35.0%
CACTTTAACCTGAGTTTGAA+TGG + chr7_4:59019039-59019058 Msa1166860:intron 35.0%
AATGTGAATTCACGAATCCA+GGG - chr7_4:59019237-59019256 None:intergenic 35.0%
AATGCAATGTCAATGTTGCT+GGG - chr7_4:59019280-59019299 None:intergenic 35.0%
AAATGCAATGTCAATGTTGC+TGG - chr7_4:59019281-59019300 None:intergenic 35.0%
TTATCAAGCCAAAGATTGTG+CGG - chr7_4:59019350-59019369 None:intergenic 35.0%
CAATAACATAATGCGAATCC+CGG + chr7_4:59019415-59019434 Msa1166860:intron 35.0%
!!! TGGCAATAGTTTTAGCTCAA+AGG + chr7_4:59019464-59019483 Msa1166860:intron 35.0%
!!! GGCAATAGTTTTAGCTCAAA+GGG + chr7_4:59019465-59019484 Msa1166860:intron 35.0%
TTTAGCGTATCTGGATTAAC+CGG - chr7_4:59019829-59019848 Msa1166870:intron 35.0%
ACTTTAGACTTTAGCGTATC+TGG - chr7_4:59019838-59019857 Msa1166870:intron 35.0%
TCAGGAGTTTAATATGGTCA+CGG - chr7_4:59019905-59019924 Msa1166870:intron 35.0%
CCATTCTCAGGAGTTTAATA+TGG - chr7_4:59019911-59019930 Msa1166870:intron 35.0%
CCATATTAAACTCCTGAGAA+TGG + chr7_4:59019908-59019927 Msa1166860:intron 35.0%
!!! ACCTTTTTTTTTTGGCAGCA+CGG - chr7_4:59019968-59019987 Msa1166870:intron 35.0%
TTTATCCCAAAATACTTGCG+AGG + chr7_4:59020009-59020028 Msa1166860:intron 35.0%
GATGTTAAATAGTCCCACAT+AGG + chr7_4:59020258-59020277 Msa1166860:intron 35.0%
GTCAGGATTATATCCTATGT+GGG - chr7_4:59020274-59020293 Msa1166870:intron 35.0%
AGTCAGGATTATATCCTATG+TGG - chr7_4:59020275-59020294 Msa1166870:intron 35.0%
! TATTTTGTAGTGAGTCTGAG+TGG + chr7_4:59020432-59020451 Msa1166860:intron 35.0%
! ATTTTGTAGTGAGTCTGAGT+GGG + chr7_4:59020433-59020452 Msa1166860:intron 35.0%
! TAGTGAGTCGGCTTAATATT+TGG + chr7_4:59020477-59020496 Msa1166860:intron 35.0%
GCTTAATATTTGGTTGGACT+TGG + chr7_4:59020487-59020506 Msa1166860:intron 35.0%
GGTTAGGTTTCATATTAGTC+CGG + chr7_4:59020510-59020529 Msa1166860:intron 35.0%
TAGTCCGGTAAATTGTTGTA+TGG + chr7_4:59020525-59020544 Msa1166860:intron 35.0%
AGGACCATACAACAATTTAC+CGG - chr7_4:59020532-59020551 Msa1166870:intron 35.0%
CAAAAAGATGTCAGCATGAT+AGG - chr7_4:59020564-59020583 Msa1166870:intron 35.0%
! CTATCATGCTGACATCTTTT+TGG + chr7_4:59020562-59020581 Msa1166860:intron 35.0%
! ATCATGCTGACATCTTTTTG+GGG + chr7_4:59020564-59020583 Msa1166860:intron 35.0%
GACATTTGTACTCTAGTTGA+TGG + chr7_4:59020593-59020612 Msa1166860:intron 35.0%
TTAAATTCACCTCTTGAAGC+TGG + chr7_4:59020622-59020641 Msa1166860:intron 35.0%
TGGTTCTTAAGACAACATTC+TGG + chr7_4:59020642-59020661 Msa1166860:intron 35.0%
!! CTTAGTGTTTTTGCACTGTT+GGG + chr7_4:59020743-59020762 Msa1166860:intron 35.0%
!!! TTTTTTGTTCCATGTTGGGT+TGG + chr7_4:59020775-59020794 Msa1166860:intron 35.0%
CGTCATTTACTTGTGTCAAT+AGG - chr7_4:59023151-59023170 Msa1166870:intron 35.0%
!! AAAAATGGTGATGGTGATGA+TGG - chr7_4:59021139-59021158 Msa1166870:intron 35.0%
AACGTTCATGCAGAATTCAA+CGG + chr7_4:59021563-59021582 Msa1166860:intron 35.0%
AACCTCTTAACGTTACATCA+AGG - chr7_4:59021619-59021638 Msa1166870:intron 35.0%
CAGAAGATCGTCATTAGTTA+GGG + chr7_4:59021879-59021898 Msa1166860:intron 35.0%
GGTAAGACAATTGTTGTAGT+TGG - chr7_4:59022210-59022229 Msa1166870:intron 35.0%
!! ATTGTCTTACCTCTGAAATG+AGG + chr7_4:59021926-59021945 Msa1166860:intron 35.0%
! TGTTAGGCTGATTTAGATGA+AGG + chr7_4:59022028-59022047 Msa1166860:intron 35.0%
!! GATGAAGGTATTAAGTGTCA+AGG + chr7_4:59022043-59022062 Msa1166860:intron 35.0%
AGGTATTAAGTGTCAAGGAA+TGG + chr7_4:59022048-59022067 Msa1166860:intron 35.0%
GTTAGGCTTGATTTAGATGA+AGG - chr7_4:59022099-59022118 Msa1166870:intron 35.0%
ATTCAAACTGACCAAACAAC+AGG - chr7_4:59022175-59022194 Msa1166870:intron 35.0%
CTACAACAATTGTCTTACTC+TGG + chr7_4:59022247-59022266 Msa1166860:intron 35.0%
AACAATTGTCTTACTCTGGA+TGG + chr7_4:59022251-59022270 Msa1166860:intron 35.0%
ACAATTGTCTTACTCTGGAT+GGG + chr7_4:59022252-59022271 Msa1166860:intron 35.0%
AGGAATAAACCTCATTTCGT+TGG + chr7_4:59022347-59022366 Msa1166860:intron 35.0%
ACGATCAACATCTTGAATGA+TGG - chr7_4:59022383-59022402 Msa1166870:intron 35.0%
TCAAGATGTTGATCGTATGT+TGG + chr7_4:59022387-59022406 Msa1166860:intron 35.0%
!! ATTCAAACTTGCTAAGCAGA+AGG - chr7_4:59022416-59022435 Msa1166870:intron 35.0%
GAGTAAGAATGAGAGTAAAG+AGG + chr7_4:59022781-59022800 Msa1166860:intron 35.0%
GATAGAAAATGAGAGTAAGG+AGG + chr7_4:59022811-59022830 Msa1166860:intron 35.0%
AGAATGTGAGGGTTTCTATA+GGG + chr7_4:59022854-59022873 Msa1166860:intron 35.0%
TGGAAAAAGAGGTTGAATGA+TGG + chr7_4:59022931-59022950 Msa1166860:intron 35.0%
AGGTTGAAGAATGAAAAGGA+CGG + chr7_4:59023023-59023042 Msa1166860:intron 35.0%
CGTCATTTACTTGTGTCAAT+AGG + chr7_4:59023151-59023170 Msa1166860:intron 35.0%
TCAATTAGGGTTAGGGATTA+TGG - chr7_4:59023237-59023256 Msa1166870:intron 35.0%
TAGAGCTTCAATTAGGGTTA+GGG - chr7_4:59023244-59023263 Msa1166870:intron 35.0%
TTAGAGCTTCAATTAGGGTT+AGG - chr7_4:59023245-59023264 Msa1166870:intron 35.0%
! GGTGATTAGTTGGTTGATTA+GGG - chr7_4:59023302-59023321 Msa1166870:intron 35.0%
! AGGTGATTAGTTGGTTGATT+AGG - chr7_4:59023303-59023322 Msa1166870:intron 35.0%
! CAGCATTTAAGGTGATTAGT+TGG - chr7_4:59023312-59023331 Msa1166870:intron 35.0%
GCAACAAAACTCAGCATTTA+AGG - chr7_4:59023323-59023342 Msa1166870:intron 35.0%
ATTATAAGGCTCAAGAAGCA+AGG - chr7_4:59023367-59023386 Msa1166870:intron 35.0%
AACATGAGACATTGGATCTT+AGG - chr7_4:59023554-59023573 Msa1166870:intron 35.0%
CTCTAATCATAGGCACATAT+AGG - chr7_4:59023669-59023688 Msa1166870:intron 35.0%
CGTGTTTGCCTATACTAATT+TGG + chr7_4:59023901-59023920 Msa1166860:intron 35.0%
CTATACTAATTTGGCAGTGT+GGG + chr7_4:59023910-59023929 Msa1166860:intron 35.0%
TATACTAATTTGGCAGTGTG+GGG + chr7_4:59023911-59023930 Msa1166860:intron 35.0%
!!! TTTTGTTATCTTTGGAGCGT+TGG - chr7_4:59024142-59024161 Msa1166870:intron 35.0%
AAAATCTCAGACATTGTTGG+TGG + chr7_4:59024159-59024178 Msa1166860:three_prime_UTR 35.0%
ATAAAACCCTAATCCGTGTC+GGG + chr7_4:59016341-59016360 Msa1166860:five_prime_UTR 40.0%
ACTGATGTCTAATGCCTGTT+TGG + chr7_4:59016648-59016667 Msa1166860:intron 40.0%
TGTCTAATGCCTGTTTGGAT+TGG + chr7_4:59016653-59016672 Msa1166860:intron 40.0%
GAACTTGTGAAAACAGCTCA+TGG + chr7_4:59016727-59016746 Msa1166860:intron 40.0%
GAGAACTTGTGAAAATCAGC+TGG - chr7_4:59016773-59016792 None:intergenic 40.0%
AAAATTGGGAGGACCAACAT+AGG - chr7_4:59017026-59017045 None:intergenic 40.0%
TTATAAAAATGTCGGGGACC+AGG - chr7_4:59017089-59017108 None:intergenic 40.0%
! GTCCCCGACATTTTTATAAC+TGG + chr7_4:59017090-59017109 Msa1166860:intron 40.0%
GTCGCTAGTATGAATATCTC+TGG + chr7_4:59017121-59017140 Msa1166860:intron 40.0%
!! GAATATCTCTGGGCTACTTT+TGG + chr7_4:59017132-59017151 Msa1166860:intron 40.0%
TGTATTAGGCTTTACGTGAG+GGG + chr7_4:59017377-59017396 Msa1166860:intron 40.0%
!! GTTTGGGTACTGGTTTACTT+TGG - chr7_4:59017532-59017551 None:intergenic 40.0%
TTTGGACCAGAGATGTGTTT+GGG - chr7_4:59017548-59017567 None:intergenic 40.0%
ATTTGGACCAGAGATGTGTT+TGG - chr7_4:59017549-59017568 None:intergenic 40.0%
ACATCTCTGGTCCAAATTGA+AGG + chr7_4:59017552-59017571 Msa1166860:CDS 40.0%
TGGTGTTCACTCCTTCAATT+TGG - chr7_4:59017566-59017585 None:intergenic 40.0%
AATTGAAGGAGTGAACACCA+AGG + chr7_4:59017566-59017585 Msa1166860:CDS 40.0%
AACCCATTACCGTTGCATAT+GGG + chr7_4:59017656-59017675 Msa1166860:CDS 40.0%
ACAATACCACTGTTACCATG+AGG - chr7_4:59017696-59017715 None:intergenic 40.0%
!! TCAAAAAGCATCCAGGACAT+GGG - chr7_4:59017891-59017910 None:intergenic 40.0%
!! TTCAAAAAGCATCCAGGACA+TGG - chr7_4:59017892-59017911 None:intergenic 40.0%
TGTAGACAGACATCAGTTCT+TGG + chr7_4:59018140-59018159 Msa1166860:intron 40.0%
! CTGCACTTTGTCTTATTACG+AGG + chr7_4:59018183-59018202 Msa1166860:intron 40.0%
GGATATTTGGTTGCAGATTC+AGG + chr7_4:59018661-59018680 Msa1166860:intron 40.0%
ACAGATTCTATCTTGATCGG+TGG + chr7_4:59019071-59019090 Msa1166860:intron 40.0%
AGAACCAGTAAAAACATCCC+TGG + chr7_4:59019217-59019236 Msa1166860:intron 40.0%
!! GAATCCAGGGATGTTTTTAC+TGG - chr7_4:59019224-59019243 None:intergenic 40.0%
CAATGTGAATTCACGAATCC+AGG - chr7_4:59019238-59019257 None:intergenic 40.0%
!!! GTTGCTGGGATGTTTTTTAC+TGG - chr7_4:59019266-59019285 None:intergenic 40.0%
ACATTAAGCCGCACAATCTT+TGG + chr7_4:59019339-59019358 Msa1166860:intron 40.0%
CGGGATTCGCATTATGTTAT+TGG - chr7_4:59019417-59019436 None:intergenic 40.0%
!! ACCTGCTGAGAAACTTGTTT+TGG + chr7_4:59019444-59019463 Msa1166860:intron 40.0%
TGCTTATAATTTGGGAGGGA+GGG - chr7_4:59019503-59019522 None:intergenic 40.0%
TTGCTTATAATTTGGGAGGG+AGG - chr7_4:59019504-59019523 None:intergenic 40.0%
TTTCTTATAATCCGGGACGA+AGG + chr7_4:59019773-59019792 Msa1166860:intron 40.0%
TTCTTATAATCCGGGACGAA+GGG + chr7_4:59019774-59019793 Msa1166860:intron 40.0%
TTCCACACTTACCATTCTTC+CGG + chr7_4:59019807-59019826 Msa1166860:intron 40.0%
ATCTGGATTAACCGGAAGAA+TGG - chr7_4:59019821-59019840 Msa1166870:intron 40.0%
GTCACGGCTAGAATAGTAAA+AGG - chr7_4:59019889-59019908 Msa1166870:intron 40.0%
TCCGTGCTGCCAAAAAAAAA+AGG + chr7_4:59019964-59019983 Msa1166860:intron 40.0%
! ACCAACCTCGCAAGTATTTT+GGG - chr7_4:59020017-59020036 Msa1166870:intron 40.0%
TCTGTGCAAACAATGGTCTA+AGG - chr7_4:59020145-59020164 Msa1166870:intron 40.0%
TTAGACCATTGTTTGCACAG+AGG + chr7_4:59020144-59020163 Msa1166860:intron 40.0%
AAGGATTATAGTTGACCCCA+GGG + chr7_4:59020393-59020412 Msa1166860:intron 40.0%
! AGCCGACTCACTAAATTTGA+AGG - chr7_4:59020470-59020489 Msa1166870:intron 40.0%
! GAGTCGGCTTAATATTTGGT+TGG + chr7_4:59020481-59020500 Msa1166860:intron 40.0%
AGCATGATAGGATCTCCATA+AGG - chr7_4:59020552-59020571 Msa1166870:intron 40.0%
! TCATGCTGACATCTTTTTGG+GGG + chr7_4:59020565-59020584 Msa1166860:intron 40.0%
TCTTAAGAACCAGCTTCAAG+AGG - chr7_4:59020634-59020653 Msa1166870:intron 40.0%
!! GCTTAGTGTTTTTGCACTGT+TGG + chr7_4:59020742-59020761 Msa1166860:intron 40.0%
! TGTAGATTTGAAGCAATGGC+CGG + chr7_4:59021533-59021552 Msa1166860:intron 40.0%
TGCCTTGATGTAACGTTAAG+AGG + chr7_4:59021614-59021633 Msa1166860:intron 40.0%
! AAAACGTGACGAGCATGTTT+TGG + chr7_4:59021774-59021793 Msa1166860:intron 40.0%
! AAACGTGACGAGCATGTTTT+GGG + chr7_4:59021775-59021794 Msa1166860:intron 40.0%
AACTAATGACGATCTTCTGG+CGG - chr7_4:59021878-59021897 Msa1166870:intron 40.0%
CCTAACTAATGACGATCTTC+TGG - chr7_4:59021881-59021900 Msa1166870:intron 40.0%
CCAGAAGATCGTCATTAGTT+AGG + chr7_4:59021878-59021897 Msa1166860:intron 40.0%
GATCGTCATTAGTTAGGGTA+AGG + chr7_4:59021884-59021903 Msa1166860:intron 40.0%
GGTAATTCAAACGTGCCAAA+CGG + chr7_4:59021947-59021966 Msa1166860:intron 40.0%
TCAAGGAATGGACCTCATTT+CGG + chr7_4:59022060-59022079 Msa1166860:intron 40.0%
AATCCTTGAGTCCTGTTGTT+TGG + chr7_4:59022161-59022180 Msa1166860:intron 40.0%
CAATTGTCTTACTCTGGATG+GGG + chr7_4:59022253-59022272 Msa1166860:intron 40.0%
TCAAGAGGCTTATCGTATGT+TGG - chr7_4:59022307-59022326 Msa1166870:intron 40.0%
CTTGAATACCAGCATTCAAG+AGG - chr7_4:59022322-59022341 Msa1166870:intron 40.0%
ATGCTGGTATTCAAGTGTCA+AGG + chr7_4:59022327-59022346 Msa1166860:intron 40.0%
ATTCAAGTGCCAACGAAATG+AGG - chr7_4:59022359-59022378 Msa1166870:intron 40.0%
AGTTTGAATTTGCCCCATTC+AGG + chr7_4:59022427-59022446 Msa1166860:intron 40.0%
AATTGTCTTGCTCCTGAATG+GGG - chr7_4:59022442-59022461 Msa1166870:intron 40.0%
CAATTGTCTTGCTCCTGAAT+GGG - chr7_4:59022443-59022462 Msa1166870:intron 40.0%
ACAATTGTCTTGCTCCTGAA+TGG - chr7_4:59022444-59022463 Msa1166870:intron 40.0%
AGCAAGACAATTGTTGCAGT+TGG + chr7_4:59022450-59022469 Msa1166860:intron 40.0%
AGACAATTGTTGCAGTTGGA+AGG + chr7_4:59022454-59022473 Msa1166860:intron 40.0%
AGTAAGGAGGAGAAAATGTG+AGG + chr7_4:59022824-59022843 Msa1166860:intron 40.0%
TGAGGAAATGTGAGAATGTG+AGG + chr7_4:59022842-59022861 Msa1166860:intron 40.0%
GAGGAAATGTGAGAATGTGA+GGG + chr7_4:59022843-59022862 Msa1166860:intron 40.0%
GAGAATGTGAGGGTTTCTAT+AGG + chr7_4:59022853-59022872 Msa1166860:intron 40.0%
GAATGTGAGGGTTTCTATAG+GGG + chr7_4:59022855-59022874 Msa1166860:intron 40.0%
TATCAGCGGTTGTTAACTAC+CGG + chr7_4:59023087-59023106 Msa1166860:intron 40.0%
CGGTTATTAACTACCGCTAA+GGG + chr7_4:59023122-59023141 Msa1166860:intron 40.0%
! AATGACGCTTTTACCCTTAG+CGG - chr7_4:59023138-59023157 Msa1166870:intron 40.0%
TGGGGTTAGAGCTTCAATTA+GGG - chr7_4:59023250-59023269 Msa1166870:intron 40.0%
! TAACCCCACCTTTTGCATTT+TGG + chr7_4:59023262-59023281 Msa1166860:intron 40.0%
GATTAGCGCCAAAATGCAAA+AGG - chr7_4:59023273-59023292 Msa1166870:intron 40.0%
GCAAGGCCAGTGTTAATAAT+GGG - chr7_4:59023350-59023369 Msa1166870:intron 40.0%
AGCAAGGCCAGTGTTAATAA+TGG - chr7_4:59023351-59023370 Msa1166870:intron 40.0%
TTACGGCTGAGGCAATTATA+AGG - chr7_4:59023381-59023400 Msa1166870:intron 40.0%
TCAATGCAAAATTACGGCTG+AGG - chr7_4:59023392-59023411 Msa1166870:intron 40.0%
CCACACTGCCAAATTAGTAT+AGG - chr7_4:59023912-59023931 Msa1166870:intron 40.0%
CCTATACTAATTTGGCAGTG+TGG + chr7_4:59023909-59023928 Msa1166860:intron 40.0%
ACCATCTTCACTATCGCAAA+TGG + chr7_4:59024036-59024055 Msa1166860:three_prime_UTR 40.0%
TTCTGGGCTTCTATCATGGA+CGG - chr7_4:59016308-59016327 None:intergenic 45.0%
! GGTTTTCTGGGCTTCTATCA+TGG - chr7_4:59016312-59016331 None:intergenic 45.0%
GATAGAAGCCCAGAAAACCT+CGG + chr7_4:59016313-59016332 Msa1166860:five_prime_UTR 45.0%
ATAGAAGCCCAGAAAACCTC+GGG + chr7_4:59016314-59016333 Msa1166860:five_prime_UTR 45.0%
! CAAAATCCCGACACGGATTA+GGG - chr7_4:59016350-59016369 None:intergenic 45.0%
! CTAATCCGTGTCGGGATTTT+GGG + chr7_4:59016349-59016368 Msa1166860:five_prime_UTR 45.0%
ATACCAAGCTACCTCTTCCT+TGG - chr7_4:59017586-59017605 None:intergenic 45.0%
TTGGTATGCCGGCAAGAAAA+TGG + chr7_4:59017599-59017618 Msa1166860:CDS 45.0%
GGCATATATCTACAAGGCCA+AGG + chr7_4:59017620-59017639 Msa1166860:CDS 45.0%
AAGGCCAAGGTGAAGAAGAA+CGG + chr7_4:59017633-59017652 Msa1166860:CDS 45.0%
GAACCCATTACCGTTGCATA+TGG + chr7_4:59017655-59017674 Msa1166860:CDS 45.0%
ACCCATTACCGTTGCATATG+GGG + chr7_4:59017657-59017676 Msa1166860:CDS 45.0%
TAACCTTGCCCCATATGCAA+CGG - chr7_4:59017668-59017687 None:intergenic 45.0%
TTTGAGTGTGGATGCATTGC+AGG + chr7_4:59017818-59017837 Msa1166860:intron 45.0%
TTGAGTGTGGATGCATTGCA+GGG + chr7_4:59017819-59017838 Msa1166860:intron 45.0%
TATGAGGTAAACCCATGTCC+TGG + chr7_4:59017877-59017896 Msa1166860:intron 45.0%
ACAAAGACCGCATAACTCTG+AGG - chr7_4:59018217-59018236 None:intergenic 45.0%
GAGTTATGCGGTCTTTGTAC+TGG + chr7_4:59018219-59018238 Msa1166860:intron 45.0%
TTTAAAGAGGGCCTCTTCTC+TGG + chr7_4:59018476-59018495 Msa1166860:intron 45.0%
CTACAGATAGACCAGAGAAG+AGG - chr7_4:59018490-59018509 None:intergenic 45.0%
GGTTGCAGATTCAGGTGATA+AGG + chr7_4:59018669-59018688 Msa1166860:intron 45.0%
ATTCAGGTGATAAGGTCAGC+AGG + chr7_4:59018677-59018696 Msa1166860:three_prime_UTR 45.0%
TGATAAGGTCAGCAGGATTG+TGG + chr7_4:59018684-59018703 Msa1166860:three_prime_UTR 45.0%
GATAAGGTCAGCAGGATTGT+GGG + chr7_4:59018685-59018704 Msa1166860:three_prime_UTR 45.0%
ACTACCTTTCTCAACTGCGA+AGG + chr7_4:59019173-59019192 Msa1166860:intron 45.0%
CTACCTTTCTCAACTGCGAA+GGG + chr7_4:59019174-59019193 Msa1166860:intron 45.0%
TTCTTCGGATACAACAGAGC+TGG - chr7_4:59019311-59019330 None:intergenic 45.0%
TTTCTCAGCAGGTTATGCAC+CGG - chr7_4:59019437-59019456 None:intergenic 45.0%
GCCAAAACAAGTTTCTCAGC+AGG - chr7_4:59019448-59019467 None:intergenic 45.0%
AACCGGAAGAATGGTAAGTG+TGG - chr7_4:59019812-59019831 Msa1166870:intron 45.0%
TCCCAAAATACTTGCGAGGT+TGG + chr7_4:59020013-59020032 Msa1166860:intron 45.0%
! CACCAACCTCGCAAGTATTT+TGG - chr7_4:59020018-59020037 Msa1166870:intron 45.0%
TGTTGGACTTGTGAGAGCAA+AGG + chr7_4:59020081-59020100 Msa1166860:intron 45.0%
GTTGGACTTGTGAGAGCAAA+GGG + chr7_4:59020082-59020101 Msa1166860:intron 45.0%
GATTGCCTCTGTGCAAACAA+TGG - chr7_4:59020152-59020171 Msa1166870:intron 45.0%
CTTGGCAACTGCTTCATGAT+AGG + chr7_4:59020341-59020360 Msa1166860:intron 45.0%
GAAGGATTATAGTTGACCCC+AGG + chr7_4:59020392-59020411 Msa1166860:intron 45.0%
ATTTGGTTGGACTTGGGGTT+AGG + chr7_4:59020494-59020513 Msa1166860:intron 45.0%
!! GTGTTTTTGCACTGTTGGGA+AGG + chr7_4:59020747-59020766 Msa1166860:intron 45.0%
! TTTTGCACTGTTGGGAAGGA+AGG + chr7_4:59020751-59020770 Msa1166860:intron 45.0%
! GTAAATGACGCTTTTACCCC+CGG + chr7_4:59020992-59021011 Msa1166860:intron 45.0%
TGGAGTGAGTGTCTGGATTA+TGG - chr7_4:59021119-59021138 Msa1166870:intron 45.0%
! GTAGATTTGAAGCAATGGCC+GGG + chr7_4:59021534-59021553 Msa1166860:intron 45.0%
GTTCATGCAGAATTCAACGG+CGG + chr7_4:59021566-59021585 Msa1166860:intron 45.0%
AACCTCAGAGGTTGAAGGTT+CGG + chr7_4:59021591-59021610 Msa1166860:intron 45.0%
TAAACATCCAAAGCTCGACG+AGG + chr7_4:59021712-59021731 Msa1166860:intron 45.0%
AAACATCCAAAGCTCGACGA+GGG + chr7_4:59021713-59021732 Msa1166860:intron 45.0%
!! AGGGGAGAGTATCATTCACT+TGG + chr7_4:59021732-59021751 Msa1166860:intron 45.0%
!! GGGGAGAGTATCATTCACTT+GGG + chr7_4:59021733-59021752 Msa1166860:intron 45.0%
!! GAGAGTATCATTCACTTGGG+TGG + chr7_4:59021736-59021755 Msa1166860:intron 45.0%
TGTTCCAGTGGATCGATATG+CGG + chr7_4:59021807-59021826 Msa1166860:intron 45.0%
TGACCAAACAACAGGACTCA+AGG - chr7_4:59022167-59022186 Msa1166870:intron 45.0%
ACGATAAGCCTCTTGAATGC+TGG + chr7_4:59022311-59022330 Msa1166860:intron 45.0%
! TGCAGTTGGAAGGTACATTC+CGG + chr7_4:59022464-59022483 Msa1166860:intron 45.0%
TTAACCGGCGCTTATATCAG+CGG + chr7_4:59023073-59023092 Msa1166860:intron 45.0%
TAGCGGTAGTTAATAACCGC+TGG - chr7_4:59023121-59023140 Msa1166870:intron 45.0%
GCGGTTATTAACTACCGCTA+AGG + chr7_4:59023121-59023140 Msa1166860:intron 45.0%
GTGGGGTTAGAGCTTCAATT+AGG - chr7_4:59023251-59023270 Msa1166870:intron 45.0%
AGCGCCAAAATGCAAAAGGT+GGG - chr7_4:59023269-59023288 Msa1166870:intron 45.0%
TAGCGCCAAAATGCAAAAGG+TGG - chr7_4:59023270-59023289 Msa1166870:intron 45.0%
! AGGCCAGTGTTAATAATGGG+AGG - chr7_4:59023347-59023366 Msa1166870:intron 45.0%
GCCATTTGCGATAGTGAAGA+TGG - chr7_4:59024040-59024059 Msa1166870:intron 45.0%
!! AAAAAATAAATTAATTCAAA+CGG - chr7_4:59020229-59020248 Msa1166870:intron 5.0%
!!! AATATTAATAATTTTTTTCA+TGG - chr7_4:59020883-59020902 Msa1166870:intron 5.0%
GGCTTCTATCATGGACGGTT+TGG - chr7_4:59016303-59016322 None:intergenic 50.0%
CCAAAATCCCGACACGGATT+AGG - chr7_4:59016351-59016370 None:intergenic 50.0%
! CCTAATCCGTGTCGGGATTT+TGG + chr7_4:59016348-59016367 Msa1166860:five_prime_UTR 50.0%
AAACGCCCAAAATCCCGACA+CGG - chr7_4:59016357-59016376 None:intergenic 50.0%
! GTTTGCTGCTGCTGTGAAGA+TGG + chr7_4:59016373-59016392 Msa1166860:exon 50.0%
TGCTGCTGTGAAGATGGTGA+AGG + chr7_4:59016379-59016398 Msa1166860:exon 50.0%
GCTGCTGTGAAGATGGTGAA+GGG + chr7_4:59016380-59016399 Msa1166860:exon 50.0%
AAGATGGTGAAGGGACGTCA+AGG + chr7_4:59016389-59016408 Msa1166860:exon 50.0%
TGTGGAGTGATGGCCTATGT+TGG + chr7_4:59017010-59017029 Msa1166860:intron 50.0%
! TACGTGAGGGGTACAATCCT+TGG + chr7_4:59017389-59017408 Msa1166860:CDS 50.0%
CCAGAGATGTGTTTGGGTAC+TGG - chr7_4:59017542-59017561 None:intergenic 50.0%
CCAGTACCCAAACACATCTC+TGG + chr7_4:59017539-59017558 Msa1166860:CDS 50.0%
AGGAGTGAACACCAAGGAAG+AGG + chr7_4:59017572-59017591 Msa1166860:CDS 50.0%
ACACCAAGGAAGAGGTAGCT+TGG + chr7_4:59017580-59017599 Msa1166860:CDS 50.0%
GAAGAGGTAGCTTGGTATGC+CGG + chr7_4:59017588-59017607 Msa1166860:CDS 50.0%
GGTTCCGTTCTTCTTCACCT+TGG - chr7_4:59017640-59017659 None:intergenic 50.0%
GCCCCATATGCAACGGTAAT+GGG - chr7_4:59017661-59017680 None:intergenic 50.0%
TGCCCCATATGCAACGGTAA+TGG - chr7_4:59017662-59017681 None:intergenic 50.0%
TTACCGTTGCATATGGGGCA+AGG + chr7_4:59017662-59017681 Msa1166860:CDS 50.0%
GCATATGGGGCAAGGTTACA+AGG + chr7_4:59017670-59017689 Msa1166860:CDS 50.0%
ACAAGGCCTCATGGTAACAG+TGG + chr7_4:59017687-59017706 Msa1166860:CDS 50.0%
ACTGGCACATGCTAGCTATC+AGG + chr7_4:59018237-59018256 Msa1166860:intron 50.0%
CAACACTGTGTGTGTGGACT+TGG + chr7_4:59018835-59018854 Msa1166860:three_prime_UTR 50.0%
TTGCCCTTCGCAGTTGAGAA+AGG - chr7_4:59019180-59019199 None:intergenic 50.0%
TTCTCAGCAGGTTATGCACC+GGG - chr7_4:59019436-59019455 None:intergenic 50.0%
TTGCAATACTCCCTTCGTCC+CGG - chr7_4:59019787-59019806 Msa1166870:intron 50.0%
GCAGCACGGAAAAACGTTTC+GGG - chr7_4:59019954-59019973 Msa1166870:intron 50.0%
GGCAGCACGGAAAAACGTTT+CGG - chr7_4:59019955-59019974 Msa1166870:intron 50.0%
GTACTCAAGCCAACCCAACA+TGG - chr7_4:59020787-59020806 Msa1166870:intron 50.0%
AGCGGTTGTTAACTACTGCC+GGG - chr7_4:59021013-59021032 Msa1166870:intron 50.0%
CAGCGGTTGTTAACTACTGC+CGG - chr7_4:59021014-59021033 Msa1166870:intron 50.0%
AGCCAGCGGTTGTTAACTAC+CGG - chr7_4:59021046-59021065 Msa1166870:intron 50.0%
!! GTGATGATGGAGTGAGTGTC+TGG - chr7_4:59021126-59021145 Msa1166870:intron 50.0%
TGCATGAACGTTGATCCACC+CGG - chr7_4:59021555-59021574 Msa1166870:intron 50.0%
! CAAGGAGGGTGCAAAACGTT+CGG + chr7_4:59021687-59021706 Msa1166860:intron 50.0%
AACATCCAAAGCTCGACGAG+GGG + chr7_4:59021714-59021733 Msa1166860:intron 50.0%
GTTCCAGTGGATCGATATGC+GGG + chr7_4:59021808-59021827 Msa1166860:intron 50.0%
TTACCCGCATATCGATCCAC+TGG - chr7_4:59021814-59021833 Msa1166870:intron 50.0%
AGGAATGGACCTCATTTCGG+TGG + chr7_4:59022063-59022082 Msa1166860:intron 50.0%
ATGCAAGTGCCACCGAAATG+AGG - chr7_4:59022075-59022094 Msa1166870:intron 50.0%
GCATCCTAGAACGCACATAG+CGG + chr7_4:59023047-59023066 Msa1166860:intron 50.0%
ACTACCGCTATGTGCGTTCT+AGG - chr7_4:59023054-59023073 Msa1166870:intron 50.0%
CGCACATAGCGGTAGTTAAC+CGG + chr7_4:59023058-59023077 Msa1166860:intron 50.0%
ACAACCGCTGATATAAGCGC+CGG - chr7_4:59023080-59023099 Msa1166870:intron 50.0%
ATAACCGCTGGTATAAGCGC+CGG - chr7_4:59023109-59023128 Msa1166870:intron 50.0%
GCGCCAAAATGCAAAAGGTG+GGG - chr7_4:59023268-59023287 Msa1166870:intron 50.0%
GCGCCTCCCATTATTAACAC+TGG + chr7_4:59023341-59023360 Msa1166860:intron 50.0%
GGCAAGGTTACAAGGCCTCA+TGG + chr7_4:59017678-59017697 Msa1166860:CDS 55.0%
GGACTTGTGAGAGCAAAGGG+AGG + chr7_4:59020085-59020104 Msa1166860:intron 55.0%
! GAGAGCAAAGGGAGGTGTGA+AGG + chr7_4:59020093-59020112 Msa1166860:intron 55.0%
CGGTTGTTAACTACTGCCGG+GGG - chr7_4:59021011-59021030 Msa1166870:intron 55.0%
GCGGTTGTTAACTACTGCCG+GGG - chr7_4:59021012-59021031 Msa1166870:intron 55.0%
CGGCAGTAGTTAACAACCGC+TGG + chr7_4:59021012-59021031 Msa1166860:intron 55.0%
ACAACCGCTGGTATAAGCGC+CGG + chr7_4:59021024-59021043 Msa1166860:intron 55.0%
ACTACCGGCGCTTATACCAG+CGG - chr7_4:59023102-59023121 Msa1166870:intron 55.0%
!! TAACAACCGCTGGCTTCCAG+CGG + chr7_4:59021051-59021070 Msa1166860:intron 55.0%
CAACGGTAGTTAACTGCCGC+TGG - chr7_4:59021070-59021089 Msa1166870:intron 55.0%
! GATTTGAAGCAATGGCCGGG+TGG + chr7_4:59021537-59021556 Msa1166860:intron 55.0%
CGGAGAACCTCAGAGGTTGA+AGG + chr7_4:59021586-59021605 Msa1166860:intron 55.0%
CACCGAACCTTCAACCTCTG+AGG - chr7_4:59021596-59021615 Msa1166870:intron 55.0%
!! TGTCTCTGGGGTTGGATGCT+TGG - chr7_4:59021667-59021686 Msa1166870:intron 55.0%
CATCCAACCCCAGAGACACA+AGG + chr7_4:59021669-59021688 Msa1166860:intron 55.0%
CAACCCCAGAGACACAAGGA+GGG + chr7_4:59021673-59021692 Msa1166860:intron 55.0%
TGCACCCTCCTTGTGTCTCT+GGG - chr7_4:59021680-59021699 Msa1166870:intron 55.0%
TTGCACCCTCCTTGTGTCTC+TGG - chr7_4:59021681-59021700 Msa1166870:intron 55.0%
TCAAACGTGCCAAACGGCCA+AGG + chr7_4:59021953-59021972 Msa1166860:intron 55.0%
ATGCTTGAGCCTTGGCCGTT+TGG - chr7_4:59021965-59021984 Msa1166870:intron 55.0%
CGAGCGAAATGCTTGAGCCT+TGG - chr7_4:59021973-59021992 Msa1166870:intron 55.0%
ACTACCGGCGCTTATACCAG+CGG + chr7_4:59023102-59023121 Msa1166860:intron 55.0%
! GACGTCAAGGAGAGCGTGTC+AGG + chr7_4:59016402-59016421 Msa1166860:CDS 60.0%
CGCCGGTAGTTAACAACCGC+TGG + chr7_4:59021041-59021060 Msa1166860:intron 60.0%
TAACTGCCGCTGGAAGCCAG+CGG - chr7_4:59021060-59021079 Msa1166870:intron 60.0%
TCAACGGCGGAGAACCTCAG+AGG + chr7_4:59021579-59021598 Msa1166860:intron 60.0%
!! CCTCCTTGTGTCTCTGGGGT+TGG - chr7_4:59021675-59021694 Msa1166870:intron 60.0%
CCAACCCCAGAGACACAAGG+AGG + chr7_4:59021672-59021691 Msa1166860:intron 60.0%
GCACCCTCCTTGTGTCTCTG+GGG - chr7_4:59021679-59021698 Msa1166870:intron 60.0%
ACTCTCCCCTCGTCGAGCTT+TGG - chr7_4:59021722-59021741 Msa1166870:intron 60.0%
! GGGAGCACAGCATGTTCCAG+TGG + chr7_4:59021795-59021814 Msa1166860:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 59016261 59024261 59016261 ID=Msa1166860;Name=Msa1166860
chr7_4 mRNA 59016261 59024261 59016261 ID=Msa1166860-mRNA-1;Parent=Msa1166860;Name=Msa1166860-mRNA-1;_AED=0.07;_eAED=0.07;_QI=131|1|1|1|0.6|0.5|6|451|112
chr7_4 exon 59016261 59016423 59016261 ID=Msa1166860-mRNA-1:exon:18242;Parent=Msa1166860-mRNA-1
chr7_4 exon 59017385 59017420 59017385 ID=Msa1166860-mRNA-1:exon:18243;Parent=Msa1166860-mRNA-1
chr7_4 exon 59017527 59017755 59017527 ID=Msa1166860-mRNA-1:exon:18244;Parent=Msa1166860-mRNA-1
chr7_4 exon 59017840 59017882 59017840 ID=Msa1166860-mRNA-1:exon:18245;Parent=Msa1166860-mRNA-1
chr7_4 exon 59018677 59018861 59018677 ID=Msa1166860-mRNA-1:exon:18246;Parent=Msa1166860-mRNA-1
chr7_4 exon 59023997 59024261 59023997 ID=Msa1166860-mRNA-1:exon:18247;Parent=Msa1166860-mRNA-1
chr7_4 five_prime_UTR 59016261 59016391 59016261 ID=Msa1166860-mRNA-1:five_prime_utr;Parent=Msa1166860-mRNA-1
chr7_4 CDS 59016392 59016423 59016392 ID=Msa1166860-mRNA-1:cds;Parent=Msa1166860-mRNA-1
chr7_4 CDS 59017385 59017420 59017385 ID=Msa1166860-mRNA-1:cds;Parent=Msa1166860-mRNA-1
chr7_4 CDS 59017527 59017755 59017527 ID=Msa1166860-mRNA-1:cds;Parent=Msa1166860-mRNA-1
chr7_4 CDS 59017840 59017881 59017840 ID=Msa1166860-mRNA-1:cds;Parent=Msa1166860-mRNA-1
chr7_4 three_prime_UTR 59017882 59017882 59017882 ID=Msa1166860-mRNA-1:three_prime_utr;Parent=Msa1166860-mRNA-1
chr7_4 three_prime_UTR 59018677 59018861 59018677 ID=Msa1166860-mRNA-1:three_prime_utr;Parent=Msa1166860-mRNA-1
chr7_4 three_prime_UTR 59023997 59024261 59023997 ID=Msa1166860-mRNA-1:three_prime_utr;Parent=Msa1166860-mRNA-1
Gene Sequence

>Msa1166860

ATGGTGAAGGGACGTCAAGGAGAGCGTGTCAGGCTTTACGTGAGGGGTACAATCCTTGGATACAAAAGATCCAAAGTAAACCAGTACCCAAACACATCTCTGGTCCAAATTGAAGGAGTGAACACCAAGGAAGAGGTAGCTTGGTATGCCGGCAAGAAAATGGCATATATCTACAAGGCCAAGGTGAAGAAGAACGGAACCCATTACCGTTGCATATGGGGCAAGGTTACAAGGCCTCATGGTAACAGTGGTATTGTTCGTGCCAAATTCAAATCAAATCTTCCTCCCAAATCAATGGGATCTCGCGTAAGAGTATTTATGTACCCAAGTAACATATGA

Protein sequence

>Msa1166860

MVKGRQGERVRLYVRGTILGYKRSKVNQYPNTSLVQIEGVNTKEEVAWYAGKKMAYIYKAKVKKNGTHYRCIWGKVTRPHGNSGIVRAKFKSNLPPKSMGSRVRVFMYPSNI*