AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1251470


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1251470 MtrunA17_Chr8g0366841 98.020 303 6 0 1 303 1 303 0.0 616
Msa1251470 MtrunA17_Chr4g0053271 34.979 243 138 4 4 243 68 293 1.64e-34 129
Msa1251470 MtrunA17_Chr8g0335201 97.674 43 1 0 183 225 34 76 9.46e-23 91.3
Msa1251470 MtrunA17_Chr3g0145331 29.200 250 154 7 1 243 334 567 1.93e-22 97.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1251470 AT3G49640.4 71.947 303 85 0 1 303 1 303 3.41e-169 471
Msa1251470 AT3G49640.1 71.947 303 85 0 1 303 1 303 2.75e-168 470
Msa1251470 AT3G49640.5 71.200 250 72 0 54 303 15 264 4.04e-135 384
Msa1251470 AT3G49640.2 71.200 250 72 0 54 303 15 264 2.39e-134 382
Msa1251470 AT3G49640.3 77.391 230 52 0 1 230 1 230 4.37e-133 378
Msa1251470 AT5G67220.1 34.568 243 139 4 4 243 87 312 3.02e-34 129
Msa1251470 AT4G38890.1 28.667 300 179 11 1 281 334 617 2.71e-22 97.4

Find 110 sgRNAs with CRISPR-Local

Find 620 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTTATGCGCATTCTATTT+TGG 0.188596 8_2:+47569054 None:intergenic
ACTCCACTTTGCCGGATCTC+TGG 0.244698 8_2:+47572449 None:intergenic
GATAGAGTTGTGTTTCAAAT+AGG 0.280513 8_2:-47575270 Msa1251470:CDS
TTGACCACGGCCCTCCATTC+AGG 0.284520 8_2:+47569381 None:intergenic
CGCTATCTCTGCTGTGGTCT+CGG 0.290167 8_2:+47569356 None:intergenic
TAACAAGAGCCATGAAAATA+TGG 0.308689 8_2:-47568955 Msa1251470:three_prime_UTR
ACATCACCATTTGCTATAAC+TGG 0.317526 8_2:+47572393 None:intergenic
GAAGCACCAAGCATACATTA+AGG 0.322141 8_2:-47569437 Msa1251470:CDS
TTAAAATCAGTAAGTTCCTT+AGG 0.336304 8_2:-47569182 Msa1251470:three_prime_UTR
TCTAGGTTTACTATAGGTAT+AGG 0.343818 8_2:+47568927 None:intergenic
CTCCACTTTGCCGGATCTCT+GGG 0.350694 8_2:+47572450 None:intergenic
AGATTACTAGCTGCTGAATA+TGG 0.352000 8_2:-47576866 Msa1251470:CDS
TGACAACAACTGACTTTGTT+TGG 0.352529 8_2:+47577065 None:intergenic
AGTCGAATCTTACATGTTAC+AGG 0.358585 8_2:+47573389 None:intergenic
GCAATTCCACTCCACTTTGC+CGG 0.367627 8_2:+47572441 None:intergenic
AACATATATCACAAGGATAA+AGG 0.375147 8_2:+47569310 None:intergenic
TTTACAGATATGTCTTAGAT+AGG 0.377928 8_2:-47572473 Msa1251470:intron
CTTAGGGGACTAGTTGATCA+TGG 0.398413 8_2:-47569165 Msa1251470:three_prime_UTR
ACACTAACTGAGCAGCAGTT+AGG 0.403336 8_2:+47575226 None:intergenic
TCATAAGAAACTTCGCCTTC+AGG 0.405440 8_2:+47569647 None:intergenic
TAAAATCAGTAAGTTCCTTA+GGG 0.405814 8_2:-47569181 Msa1251470:three_prime_UTR
TTCAGATCTTAACAACATTA+CGG 0.406436 8_2:-47573427 Msa1251470:intron
ATTTCTTGGTCAGAACATCT+TGG 0.411985 8_2:-47575357 Msa1251470:intron
ATCACTGATAAGCTCTGGTT+TGG 0.427978 8_2:+47573700 None:intergenic
TAAAATCACAGAAAAGTGAT+TGG 0.430252 8_2:+47569239 None:intergenic
CTTAGATAGGCCCAGAGATC+CGG 0.433888 8_2:-47572460 Msa1251470:CDS
GCCAGGCGAATTGAGAAAAC+TGG 0.435894 8_2:-47573335 Msa1251470:CDS
CACTAACTGAGCAGCAGTTA+GGG 0.436616 8_2:+47575227 None:intergenic
CCTTCAGGTGAAAATATTGA+AGG 0.443848 8_2:+47569662 None:intergenic
CCACTCAAAGAAAATGCCTT+GGG 0.446113 8_2:+47573746 None:intergenic
ATGATACAGTGGAGCTTGCC+AGG 0.449136 8_2:-47573352 Msa1251470:CDS
CATATCCCTTAATGTATGCT+TGG 0.458469 8_2:+47569431 None:intergenic
TGAAGGCGAAGTTTCTTATG+AGG 0.460045 8_2:-47569645 Msa1251470:CDS
TCTATTCCAGTTATAGCAAA+TGG 0.466108 8_2:-47572399 Msa1251470:CDS
AATTTGGAGATTACCTTCCA+TGG 0.468028 8_2:+47573294 None:intergenic
CGCCATTTGGTATCCTGAGT+TGG 0.469289 8_2:+47568868 None:intergenic
CAACGCATTAAATCTGCTAC+AGG 0.473736 8_2:-47572351 Msa1251470:intron
AATGAATTGAATATCGAGAT+GGG 0.473794 8_2:+47577103 None:intergenic
GGAAGAGTGTACCGTTGATT+CGG 0.476162 8_2:+47576786 None:intergenic
TTGATTTCAGTGCATCTTGT+GGG 0.476491 8_2:-47569472 Msa1251470:intron
CAGTTGTTGTCAAACAAAGA+TGG 0.479054 8_2:-47577054 Msa1251470:exon
TCAATTCATTCATTCTGTAT+CGG 0.485612 8_2:-47577090 Msa1251470:five_prime_UTR
ACCACTCAAAGAAAATGCCT+TGG 0.485665 8_2:+47573745 None:intergenic
AAGCACCAAGCATACATTAA+GGG 0.492478 8_2:-47569436 Msa1251470:CDS
TGACCACGGCCCTCCATTCA+GGG 0.494351 8_2:+47569382 None:intergenic
ACCCTCTCCTTCCCCGCACA+AGG 0.496219 8_2:-47569102 Msa1251470:three_prime_UTR
CTCTTGAAGTCCCTGAATGG+AGG 0.502906 8_2:-47569392 Msa1251470:CDS
GTTGATGCTCTTGCAGTCCA+TGG 0.506359 8_2:-47573311 Msa1251470:CDS
CCTCTCTTGAAGTCCCTGAA+TGG 0.515169 8_2:-47569395 Msa1251470:CDS
TTAGGGGACTAGTTGATCAT+GGG 0.515787 8_2:-47569164 Msa1251470:three_prime_UTR
TCTAAGACCTTGTGCGGGGA+AGG 0.517075 8_2:+47569095 None:intergenic
AAAGAATTTCTCTCCAACTC+AGG 0.518637 8_2:-47568881 Msa1251470:three_prime_UTR
GAATGAATTGAATATCGAGA+TGG 0.521406 8_2:+47577102 None:intergenic
CATGGGGTAGAATCCTAGTC+AGG 0.523783 8_2:-47569147 Msa1251470:three_prime_UTR
GTCGGTGATGGCTGCAAGAG+GGG 0.530783 8_2:-47569696 Msa1251470:CDS
GGAGGATCTGAAATAATCCT+TGG 0.534802 8_2:-47568987 Msa1251470:three_prime_UTR
AAACTCACAACGCGAACCAT+AGG 0.535701 8_2:+47577005 None:intergenic
CTCCAACTCAGGATACCAAA+TGG 0.536922 8_2:-47568870 Msa1251470:three_prime_UTR
ATAAGGTGCTTCGTCGGTGA+TGG 0.537137 8_2:-47569708 Msa1251470:intron
CGTCGGTGATGGCTGCAAGA+GGG 0.537292 8_2:-47569697 Msa1251470:CDS
CTTACATCACTGATAAGCTC+TGG 0.538803 8_2:+47573695 None:intergenic
TATGGTGCAGATATCACTTA+CGG 0.544347 8_2:-47576848 Msa1251470:CDS
TCGTCGGTGATGGCTGCAAG+AGG 0.548580 8_2:-47569698 Msa1251470:CDS
AGCAGCAGTTAGGGCCCTCA+CGG 0.548803 8_2:+47575236 None:intergenic
TGAATTGAATATCGAGATGG+GGG 0.552462 8_2:+47577105 None:intergenic
GACCTTGTGCGGGGAAGGAG+AGG 0.553025 8_2:+47569100 None:intergenic
AAAATCAAAACAGCCTGACT+AGG 0.554623 8_2:+47569134 None:intergenic
AAATGCGAACGCCGAATCAA+CGG 0.555297 8_2:-47576797 Msa1251470:intron
TTTGATTTCAGTGCATCTTG+TGG 0.562054 8_2:-47569473 Msa1251470:intron
CTGTAGCAGATTTAATGCGT+TGG 0.562302 8_2:+47572352 None:intergenic
TTGTGCGGGGAAGGAGAGGG+TGG 0.565129 8_2:+47569104 None:intergenic
AGAGGTCTAAGACCTTGTGC+GGG 0.568317 8_2:+47569090 None:intergenic
TCAGCAGCTAGTAATCTAAG+TGG 0.570303 8_2:+47576872 None:intergenic
CCCTTTCTCCACAAAATCAG+TGG 0.575858 8_2:+47575332 None:intergenic
TCTTGAAGTCCCTGAATGGA+GGG 0.575937 8_2:-47569391 Msa1251470:CDS
CAGAGGTCTAAGACCTTGTG+CGG 0.579438 8_2:+47569089 None:intergenic
ACCTTGTGCGGGGAAGGAGA+GGG 0.582678 8_2:+47569101 None:intergenic
TCTTGTTAGTATTCAGACCA+AGG 0.585388 8_2:+47568970 None:intergenic
CTCACTTAGTAGACATGCAG+TGG 0.590602 8_2:+47569009 None:intergenic
GTTTACTATAGGTATAGGAC+AGG 0.590925 8_2:+47568932 None:intergenic
ATGCTCTTGCAGTCCATGGA+AGG 0.599355 8_2:-47573307 Msa1251470:intron
AGTCCCTGAATGGAGGGCCG+TGG 0.602370 8_2:-47569385 Msa1251470:CDS
AGAGATCCGGCAAAGTGGAG+TGG 0.604997 8_2:-47572447 Msa1251470:CDS
TTTGGCATAAGGTGCTTCGT+CGG 0.606608 8_2:-47569714 Msa1251470:intron
TGCTGCAATAGATATTAACA+TGG 0.611209 8_2:-47573774 Msa1251470:CDS
AGGCACATCTGATGCCGTGA+GGG 0.612052 8_2:-47575250 Msa1251470:CDS
CATGATCAACTAGTCCCCTA+AGG 0.612461 8_2:+47569166 None:intergenic
AAAATCAGTAAGTTCCTTAG+GGG 0.619097 8_2:-47569180 Msa1251470:three_prime_UTR
CACTGCATGTCTACTAAGTG+AGG 0.619273 8_2:-47569008 Msa1251470:three_prime_UTR
AACTTACGCTATCTCTGCTG+TGG 0.623296 8_2:+47569350 None:intergenic
ATGAATTGAATATCGAGATG+GGG 0.625121 8_2:+47577104 None:intergenic
CCATTCAGGGACTTCAAGAG+AGG 0.637722 8_2:+47569395 None:intergenic
TATTAACATGGGATGCCCCA+AGG 0.638952 8_2:-47573762 Msa1251470:CDS
TGTGGTCTCGGATTTGACCA+CGG 0.644228 8_2:+47569368 None:intergenic
TTTGGACACAAATTATACAG+AGG 0.649691 8_2:+47569072 None:intergenic
TAGGGGACTAGTTGATCATG+GGG 0.652848 8_2:-47569163 Msa1251470:three_prime_UTR
AAAATTACCGCATGATACAG+TGG 0.653849 8_2:-47573363 Msa1251470:CDS
GAATCTTACATGTTACAGGT+AGG 0.659712 8_2:+47573393 None:intergenic
GCAAGCTCCACTGTATCATG+CGG 0.672086 8_2:+47573356 None:intergenic
TGCATGTCTACTAAGTGAGG+AGG 0.678343 8_2:-47569005 Msa1251470:three_prime_UTR
AGATAGTGCTGACACAACAT+CGG 0.679463 8_2:+47572419 None:intergenic
CACTCAAAGAAAATGCCTTG+GGG 0.682276 8_2:+47573747 None:intergenic
TCACTTAGTAGACATGCAGT+GGG 0.682847 8_2:+47569010 None:intergenic
TAGGCACATCTGATGCCGTG+AGG 0.684402 8_2:-47575251 Msa1251470:CDS
GAGGTCTAAGACCTTGTGCG+GGG 0.696780 8_2:+47569091 None:intergenic
AGATCTTAACAACATTACGG+AGG 0.701161 8_2:-47573424 Msa1251470:CDS
TCAACACAACATATATCACA+AGG 0.701415 8_2:+47569303 None:intergenic
GAATTGAATATCGAGATGGG+GGG 0.711928 8_2:+47577106 None:intergenic
GCTGCAATAGATATTAACAT+GGG 0.721113 8_2:-47573773 Msa1251470:CDS
TGGCTGCAAGAGGGGCACTG+TGG 0.746795 8_2:-47569688 Msa1251470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAATATTACTGATAAA+TGG - chr8_2:47569568-47569587 Msa1251470:intron 10.0%
!! AAATAATATTACTGATAAAT+GGG - chr8_2:47569569-47569588 Msa1251470:intron 10.0%
!! TCTAATATTAGTATAAATAA+GGG + chr8_2:47570147-47570166 None:intergenic 10.0%
!!! TCTATTATTTAATTTGAATT+AGG + chr8_2:47570172-47570191 None:intergenic 10.0%
!! AAAAATACTAATAAAATTCA+AGG - chr8_2:47574437-47574456 Msa1251470:intron 10.0%
!! CATTAATTAACTAATTTGAA+TGG + chr8_2:47569372-47569391 None:intergenic 15.0%
!! TTAATTAATGACTTAAAGTA+GGG - chr8_2:47569382-47569401 Msa1251470:CDS 15.0%
!! AAAAAAAAGAGAAATAAAGA+GGG - chr8_2:47569834-47569853 Msa1251470:intron 15.0%
!! GTCTAATATTAGTATAAATA+AGG + chr8_2:47570148-47570167 None:intergenic 15.0%
!! AATATCAACATATTATAAGA+TGG - chr8_2:47570304-47570323 Msa1251470:intron 15.0%
!! ATTTGTGTTTATCAAAAATT+AGG - chr8_2:47570405-47570424 Msa1251470:intron 15.0%
!!! CCAATAATAAGTAATTATTT+TGG + chr8_2:47570849-47570868 None:intergenic 15.0%
!! CCAAAATAATTACTTATTAT+TGG - chr8_2:47570846-47570865 Msa1251470:intron 15.0%
!! TTTACTTTATTAGAATTGAA+AGG - chr8_2:47570987-47571006 Msa1251470:intron 15.0%
!!! GGAATTTTATAATAAATCAT+TGG + chr8_2:47571104-47571123 None:intergenic 15.0%
!! CTTATCTTATAATAAAAAGT+AGG + chr8_2:47571357-47571376 None:intergenic 15.0%
!!! TTTTTTTTTCCATTATAATC+TGG - chr8_2:47571524-47571543 Msa1251470:intron 15.0%
!! TAGAATATCTATATAATCTT+AGG - chr8_2:47573026-47573045 Msa1251470:intron 15.0%
!! AGAATATCTATATAATCTTA+GGG - chr8_2:47573027-47573046 Msa1251470:intron 15.0%
!!! ACAGCTTTAATTTTTATATT+TGG + chr8_2:47573276-47573295 None:intergenic 15.0%
!!! TTTTAGTATTTTTTTTCAAC+AGG + chr8_2:47574329-47574348 None:intergenic 15.0%
!!! TATAATATTTAGAATATCCA+AGG - chr8_2:47575078-47575097 Msa1251470:intron 15.0%
!!! TATTTATTTTCTAATTGACA+TGG - chr8_2:47576255-47576274 Msa1251470:intron 15.0%
!! TTACACAAAAAGAATATATT+AGG - chr8_2:47576370-47576389 Msa1251470:intron 15.0%
!! TATGATAAAAGATAATATGT+TGG + chr8_2:47576441-47576460 None:intergenic 15.0%
!!! AAAGAATTTTTTTTTTCTCT+AGG + chr8_2:47577085-47577104 None:intergenic 15.0%
!!! AGTTGAATTGAATTGAATTT+TGG + chr8_2:47569034-47569053 None:intergenic 20.0%
!!! TTGAATATACTGTTTTGTTT+AGG - chr8_2:47569089-47569108 Msa1251470:three_prime_UTR 20.0%
!!! TGAATATACTGTTTTGTTTA+GGG - chr8_2:47569090-47569109 Msa1251470:three_prime_UTR 20.0%
!! TAATTAACTAATTTGAATGG+CGG + chr8_2:47569369-47569388 None:intergenic 20.0%
!! GTTAATTAATGACTTAAAGT+AGG - chr8_2:47569381-47569400 Msa1251470:CDS 20.0%
!! AACTAGAAATAACAAAGATT+AGG - chr8_2:47569406-47569425 Msa1251470:CDS 20.0%
!! GAAAAAAAAGAGAAATAAAG+AGG - chr8_2:47569833-47569852 Msa1251470:intron 20.0%
!! AAAAAAAGAGAAATAAAGAG+GGG - chr8_2:47569835-47569854 Msa1251470:intron 20.0%
!! AAAACAAAGTAAAAACAATG+TGG + chr8_2:47569944-47569963 None:intergenic 20.0%
!!! AAATAAGGGTCATTTTTTAA+AGG + chr8_2:47570133-47570152 None:intergenic 20.0%
!! GTTTGAAAACTAATTATAAG+AGG - chr8_2:47570219-47570238 Msa1251470:intron 20.0%
!!! ATCTTCTAAAGATTACAAAT+TGG - chr8_2:47570333-47570352 Msa1251470:intron 20.0%
!!! AAATATTTCTTTTCCAGTAA+TGG + chr8_2:47570490-47570509 None:intergenic 20.0%
!! GGAAAAGAAATATTTCATTA+AGG - chr8_2:47570495-47570514 Msa1251470:intron 20.0%
!!! TTTTAATGTAAACACATGAA+CGG + chr8_2:47571013-47571032 None:intergenic 20.0%
!! TAATAAATCATTGGTGTATT+TGG + chr8_2:47571095-47571114 None:intergenic 20.0%
!! TTATTATAAGATAAGATACC+TGG - chr8_2:47571362-47571381 Msa1251470:intron 20.0%
!!! CTAATCATATTTAAAAGTGT+CGG + chr8_2:47571629-47571648 None:intergenic 20.0%
!!! TTTCATACTATTTTGTTCTT+GGG - chr8_2:47572490-47572509 Msa1251470:intron 20.0%
!!! TAAGATCTGAATTTTTAAAG+AGG + chr8_2:47572556-47572575 None:intergenic 20.0%
!! CTGAAAAAAGAAACAAAATT+TGG + chr8_2:47572717-47572736 None:intergenic 20.0%
!!! CAAATTTTGTTTCTTTTTTC+AGG - chr8_2:47572715-47572734 Msa1251470:intron 20.0%
!! ATAAAGTTAAAACAACCATA+TGG + chr8_2:47572766-47572785 None:intergenic 20.0%
!! TGTCATGTTCAATAAAATTT+GGG + chr8_2:47572879-47572898 None:intergenic 20.0%
!! ATGTCATGTTCAATAAAATT+TGG + chr8_2:47572880-47572899 None:intergenic 20.0%
!!! AATTTTATTGAACATGACAT+CGG - chr8_2:47572880-47572899 Msa1251470:intron 20.0%
!!! TGAATTTTGAGTATTGTTTA+AGG + chr8_2:47574354-47574373 None:intergenic 20.0%
!!! TGTGACTTTTATTTCAAATT+AGG + chr8_2:47574386-47574405 None:intergenic 20.0%
!!! TTGTTAAATTTTTAATTGGG+AGG + chr8_2:47574533-47574552 None:intergenic 20.0%
!!! TTCACTTAAAACTGTTTTAA+GGG + chr8_2:47574805-47574824 None:intergenic 20.0%
!!! TTTCACTTAAAACTGTTTTA+AGG + chr8_2:47574806-47574825 None:intergenic 20.0%
!! GTATTTGATCTGTAATTAAT+AGG + chr8_2:47575548-47575567 None:intergenic 20.0%
!! ACAAAAAGAATATATTAGGA+AGG - chr8_2:47576374-47576393 Msa1251470:intron 20.0%
! AATGAATTGAATATCGAGAT+GGG + chr8_2:47568892-47568911 None:intergenic 25.0%
! TCAATTCATTCATTCTGTAT+CGG - chr8_2:47568902-47568921 Msa1251470:three_prime_UTR 25.0%
!!! ACACAACAAGTTGATAATAA+AGG + chr8_2:47569230-47569249 None:intergenic 25.0%
! TAGAAATAACAAAGATTAGG+AGG - chr8_2:47569409-47569428 Msa1251470:CDS 25.0%
! TTATTTATACATACATGCGA+TGG + chr8_2:47569555-47569574 None:intergenic 25.0%
! AAGTTATAAACTAATTGCGA+GGG - chr8_2:47569635-47569654 Msa1251470:CDS 25.0%
!! AGGTATAATGTTCTAGTTAT+AGG - chr8_2:47569789-47569808 Msa1251470:intron 25.0%
!! GGTATAATGTTCTAGTTATA+GGG - chr8_2:47569790-47569809 Msa1251470:intron 25.0%
! TTTCAGTCTATGTAATGTAA+TGG - chr8_2:47569867-47569886 Msa1251470:intron 25.0%
!!! TTTTTAAAGGAGTGCAAATA+AGG + chr8_2:47570120-47570139 None:intergenic 25.0%
! TCAAACTTCTTAGTTGTTAT+CGG + chr8_2:47570205-47570224 None:intergenic 25.0%
!!! AGTATTTTAGATTCTCTGTT+GGG + chr8_2:47570277-47570296 None:intergenic 25.0%
!! ATTGGTGATTTAGTAAATGT+AGG - chr8_2:47570351-47570370 Msa1251470:intron 25.0%
! ACATTTAGTCTAGATATTAG+TGG + chr8_2:47570582-47570601 None:intergenic 25.0%
!! TAGACTAAATGTTTTCGTTT+TGG - chr8_2:47570590-47570609 Msa1251470:intron 25.0%
!! CAATCCATTATCTTATTTCT+TGG - chr8_2:47570621-47570640 Msa1251470:intron 25.0%
! ATCATGCCTTATAGATAAAA+AGG - chr8_2:47570919-47570938 Msa1251470:intron 25.0%
!! AACCAACCTTTTTATCTATA+AGG + chr8_2:47570928-47570947 None:intergenic 25.0%
!! TAGTCATTTGTTAGTGAATT+TGG - chr8_2:47571259-47571278 Msa1251470:intron 25.0%
!! AGTCATTTGTTAGTGAATTT+GGG - chr8_2:47571260-47571279 Msa1251470:intron 25.0%
!! CGTCTTTTAAATATGAATGA+AGG - chr8_2:47571444-47571463 Msa1251470:intron 25.0%
!!! TTTTTTTATCATAGCTGTTC+TGG - chr8_2:47571497-47571516 Msa1251470:intron 25.0%
! TAATAGGGGATAGTATTAAT+AGG - chr8_2:47571820-47571839 Msa1251470:intron 25.0%
!!! TGGTCATTTAGTAAGTTTTT+TGG - chr8_2:47571851-47571870 Msa1251470:intron 25.0%
!!! GGTCATTTAGTAAGTTTTTT+GGG - chr8_2:47571852-47571871 Msa1251470:intron 25.0%
!!! GTCATTTAGTAAGTTTTTTG+GGG - chr8_2:47571853-47571872 Msa1251470:intron 25.0%
! GTTGGAATAATTAGAGAATA+AGG - chr8_2:47571875-47571894 Msa1251470:intron 25.0%
! CAATTAACACTTCATTACTA+AGG + chr8_2:47572133-47572152 None:intergenic 25.0%
!! TTGTGTTCTTTATGTTACTT+TGG - chr8_2:47572150-47572169 Msa1251470:intron 25.0%
! TCTAATAGTTTATTGTTGCT+TGG - chr8_2:47572320-47572339 Msa1251470:intron 25.0%
! TTTGTTAAGTGGGAAATTAT+AGG - chr8_2:47572431-47572450 Msa1251470:CDS 25.0%
! TTGTTAAGTGGGAAATTATA+GGG - chr8_2:47572432-47572451 Msa1251470:CDS 25.0%
!! CTTTCATACTATTTTGTTCT+TGG - chr8_2:47572489-47572508 Msa1251470:intron 25.0%
! TTGCAAAATTACAATCTGAT+AGG + chr8_2:47572518-47572537 None:intergenic 25.0%
!!! ATCTGAATTTTTAAAGAGGA+AGG + chr8_2:47572552-47572571 None:intergenic 25.0%
! TTCAGATCTTAACAACATTA+CGG - chr8_2:47572565-47572584 Msa1251470:intron 25.0%
!!! ATGTTACCTTTTTAGAACAT+TGG - chr8_2:47573120-47573139 Msa1251470:intron 25.0%
! AAAAAATCCAATATGTCGTT+TGG - chr8_2:47573195-47573214 Msa1251470:intron 25.0%
! ATAAGTTGCATAAGAATGAA+AGG - chr8_2:47573308-47573327 Msa1251470:CDS 25.0%
!! AGAATGAAAGGTGTATAAAA+AGG - chr8_2:47573320-47573339 Msa1251470:CDS 25.0%
! AAATTCATGATCTAACTTAG+CGG + chr8_2:47573443-47573462 None:intergenic 25.0%
! TAGATTAAAACAAAAACGTG+AGG + chr8_2:47573499-47573518 None:intergenic 25.0%
! TTTACAGATATGTCTTAGAT+AGG - chr8_2:47573519-47573538 Msa1251470:intron 25.0%
!!! ACAAACAAATTTGTTAGCTT+TGG + chr8_2:47573911-47573930 None:intergenic 25.0%
! TATGCAATATATAGATGTCA+TGG + chr8_2:47573935-47573954 None:intergenic 25.0%
!!! TTTGTTACTTTAAGCTTTAG+AGG + chr8_2:47574479-47574498 None:intergenic 25.0%
! ACAACAGAGATTTCATAATA+TGG - chr8_2:47574975-47574994 Msa1251470:intron 25.0%
! GTAAACTATACATTGAATGT+AGG - chr8_2:47575020-47575039 Msa1251470:intron 25.0%
! AAAACAATACAATAACTCCA+AGG - chr8_2:47575048-47575067 Msa1251470:intron 25.0%
! AAATATTATAAGAACTGCCT+TGG + chr8_2:47575068-47575087 None:intergenic 25.0%
!! ACTGATATTGTGTGTATTTT+TGG - chr8_2:47575133-47575152 Msa1251470:intron 25.0%
!! CTGATATTGTGTGTATTTTT+GGG - chr8_2:47575134-47575153 Msa1251470:intron 25.0%
!!! TGATATTGTGTGTATTTTTG+GGG - chr8_2:47575135-47575154 Msa1251470:intron 25.0%
!! AGTTAGTTTAAAGGAAAGTT+AGG - chr8_2:47575288-47575307 Msa1251470:CDS 25.0%
!! CTGATAATTTTCTTCACTTA+AGG + chr8_2:47575345-47575364 None:intergenic 25.0%
! ACAGATCAAATACCTTAAAT+TGG - chr8_2:47575555-47575574 Msa1251470:intron 25.0%
! ATGACTATTCACCAATTTAA+GGG + chr8_2:47575607-47575626 None:intergenic 25.0%
! CATCTCATCTTTCATTAATA+AGG - chr8_2:47575742-47575761 Msa1251470:intron 25.0%
! GAATGGTGTCTTTAATTATT+AGG + chr8_2:47576147-47576166 None:intergenic 25.0%
!! ATTTTCTAATTGACATGGTT+TGG - chr8_2:47576260-47576279 Msa1251470:intron 25.0%
!! TCTTTTATCATATGCACTAT+CGG - chr8_2:47576449-47576468 Msa1251470:intron 25.0%
! AACATATATCACAAGGATAA+AGG + chr8_2:47576685-47576704 None:intergenic 25.0%
! TAAAATCACAGAAAAGTGAT+TGG + chr8_2:47576756-47576775 None:intergenic 25.0%
! TTAAAATCAGTAAGTTCCTT+AGG - chr8_2:47576810-47576829 Msa1251470:CDS 25.0%
! TAAAATCAGTAAGTTCCTTA+GGG - chr8_2:47576811-47576830 Msa1251470:CDS 25.0%
!! TTTTTCTCTAGGTTTACTAT+AGG + chr8_2:47577074-47577093 None:intergenic 25.0%
ATGAATTGAATATCGAGATG+GGG + chr8_2:47568891-47568910 None:intergenic 30.0%
GAATGAATTGAATATCGAGA+TGG + chr8_2:47568893-47568912 None:intergenic 30.0%
! GAGCAAGAATCTTTTTGTTA+CGG + chr8_2:47568968-47568987 None:intergenic 30.0%
!! GTTCGCATTTGATAATTTTG+TGG + chr8_2:47569185-47569204 None:intergenic 30.0%
GAAGTTATAAACTAATTGCG+AGG - chr8_2:47569634-47569653 Msa1251470:CDS 30.0%
AGTTATAAACTAATTGCGAG+GGG - chr8_2:47569636-47569655 Msa1251470:CDS 30.0%
AGTTGGATATGAATATGCAA+AGG - chr8_2:47569769-47569788 Msa1251470:intron 30.0%
!!! TAGTTATAGGGTTTTAGACA+AGG - chr8_2:47569802-47569821 Msa1251470:intron 30.0%
ATGTAATGTAATGGTCTGTT+TGG - chr8_2:47569876-47569895 Msa1251470:intron 30.0%
! GTTTTCAACGTTTTGTACAT+AGG - chr8_2:47569966-47569985 Msa1251470:intron 30.0%
AAAACCCTCTAACTTCAATA+TGG + chr8_2:47570015-47570034 None:intergenic 30.0%
!! GAGTATTTTAGATTCTCTGT+TGG + chr8_2:47570278-47570297 None:intergenic 30.0%
ATCTATCTGTAATGATTGAC+TGG + chr8_2:47570440-47570459 None:intergenic 30.0%
! CATTACAGATAGATGTTTTC+AGG - chr8_2:47570446-47570465 Msa1251470:intron 30.0%
!! CAAAACTTTTTAGCCATTAC+TGG - chr8_2:47570474-47570493 Msa1251470:intron 30.0%
CTGACCAAGAAATAAGATAA+TGG + chr8_2:47570628-47570647 None:intergenic 30.0%
! TCTATCTTTTTCTTGATCAC+AGG + chr8_2:47570708-47570727 None:intergenic 30.0%
GATAGAGTTGTGTTTCAAAT+AGG - chr8_2:47570722-47570741 Msa1251470:intron 30.0%
TGCCTTATAGATAAAAAGGT+TGG - chr8_2:47570923-47570942 Msa1251470:intron 30.0%
AATCTTAGTTATAGTCACGA+TGG - chr8_2:47571041-47571060 Msa1251470:intron 30.0%
ATCTTAGTTATAGTCACGAT+GGG - chr8_2:47571042-47571061 Msa1251470:intron 30.0%
! ATCATTGGTGTATTTGGAAT+TGG + chr8_2:47571089-47571108 None:intergenic 30.0%
CATGCTGCCAATAAATAAAA+GGG - chr8_2:47571217-47571236 Msa1251470:intron 30.0%
ATGCTGCCAATAAATAAAAG+GGG - chr8_2:47571218-47571237 Msa1251470:intron 30.0%
CAATTCTGCATAAAACTTGA+GGG + chr8_2:47571317-47571336 None:intergenic 30.0%
ACAATTCTGCATAAAACTTG+AGG + chr8_2:47571318-47571337 None:intergenic 30.0%
AGATAACTGCCAGATTATAA+TGG + chr8_2:47571536-47571555 None:intergenic 30.0%
AAATAGCAGCAAATAGTTCT+TGG - chr8_2:47571747-47571766 Msa1251470:intron 30.0%
AATAGCAGCAAATAGTTCTT+GGG - chr8_2:47571748-47571767 Msa1251470:intron 30.0%
AGTATTAATAGGTACTCTCA+TGG - chr8_2:47571831-47571850 Msa1251470:intron 30.0%
!!! TTTAGTAAGTTTTTTGGGGT+TGG - chr8_2:47571857-47571876 Msa1251470:intron 30.0%
CATATGAATCACTCATGTAT+AGG + chr8_2:47572044-47572063 None:intergenic 30.0%
CTATACATGAGTGATTCATA+TGG - chr8_2:47572042-47572061 Msa1251470:intron 30.0%
TCTAACACTAAACTAGCAAA+TGG - chr8_2:47572069-47572088 Msa1251470:intron 30.0%
TTTATCTTTATTGACGTTGC+AGG - chr8_2:47572184-47572203 Msa1251470:intron 30.0%
TGCTGCAATAGATATTAACA+TGG - chr8_2:47572218-47572237 Msa1251470:intron 30.0%
GCTGCAATAGATATTAACAT+GGG - chr8_2:47572219-47572238 Msa1251470:intron 30.0%
! CCAGATATGTTAACTGTTTT+CGG - chr8_2:47572948-47572967 Msa1251470:intron 30.0%
TTTGGCATCTTGTAGTTATT+TGG + chr8_2:47572988-47573007 None:intergenic 30.0%
ACAAAAATGTGCCAATAGTT+TGG + chr8_2:47573006-47573025 None:intergenic 30.0%
!! CTTAGCTTGTACTATCAATA+TGG - chr8_2:47573143-47573162 Msa1251470:intron 30.0%
TATTGTTTGTAAGTGCACAT+GGG + chr8_2:47573418-47573437 None:intergenic 30.0%
TCTATTCCAGTTATAGCAAA+TGG - chr8_2:47573593-47573612 Msa1251470:intron 30.0%
! GCTCATATAAGTTTGTTTCA+TGG + chr8_2:47573732-47573751 None:intergenic 30.0%
TTGTGAAGAACTCATTAACA+AGG + chr8_2:47573830-47573849 None:intergenic 30.0%
GTAGAAATAACTCAATCTCT+TGG - chr8_2:47573869-47573888 Msa1251470:intron 30.0%
AGATTACCAATAAGATGATG+TGG + chr8_2:47574062-47574081 None:intergenic 30.0%
! TGAGTTGAAGTTACACAAAT+GGG + chr8_2:47574092-47574111 None:intergenic 30.0%
TTCATACTCTGTTGTTAAAG+CGG - chr8_2:47574192-47574211 Msa1251470:intron 30.0%
AATGCAGAAGAGTAATAGTT+AGG - chr8_2:47574758-47574777 Msa1251470:intron 30.0%
ATGCAGAAGAGTAATAGTTA+GGG - chr8_2:47574759-47574778 Msa1251470:intron 30.0%
ACAGAGATTTCATAATATGG+AGG - chr8_2:47574978-47574997 Msa1251470:intron 30.0%
AAAAGTAACACCAAAGAGAT+TGG - chr8_2:47575105-47575124 Msa1251470:intron 30.0%
AATATTATGCATGTATGACG+TGG - chr8_2:47575186-47575205 Msa1251470:intron 30.0%
! CAAGTCACAAGTTAGTTTAA+AGG - chr8_2:47575279-47575298 Msa1251470:CDS 30.0%
!! GATGAGAATTCATTTTGACA+TGG - chr8_2:47575379-47575398 Msa1251470:intron 30.0%
TGTTCTGATCCGATATATAT+AGG - chr8_2:47575449-47575468 Msa1251470:intron 30.0%
CACTCGTAATAAATGCTAAT+CGG - chr8_2:47575473-47575492 Msa1251470:intron 30.0%
TAAATGCTAATCGGTCAATA+AGG - chr8_2:47575482-47575501 Msa1251470:intron 30.0%
TGACTATTCACCAATTTAAG+GGG + chr8_2:47575606-47575625 None:intergenic 30.0%
GATGACTATTCACCAATTTA+AGG + chr8_2:47575608-47575627 None:intergenic 30.0%
TAATCCCTTGTCAAAACATT+TGG - chr8_2:47575672-47575691 Msa1251470:intron 30.0%
ATCGAGTTATTAGAAAGTCT+AGG - chr8_2:47575857-47575876 Msa1251470:intron 30.0%
TCGAGTTATTAGAAAGTCTA+GGG - chr8_2:47575858-47575877 Msa1251470:intron 30.0%
TGGTTCAATTTAGTGAAGAT+TGG - chr8_2:47575893-47575912 Msa1251470:intron 30.0%
TGTAGTTCTCTTATCGAATT+GGG + chr8_2:47575936-47575955 None:intergenic 30.0%
TTGTAGTTCTCTTATCGAAT+TGG + chr8_2:47575937-47575956 None:intergenic 30.0%
TATAAACAACTCCTGATCTT+GGG + chr8_2:47575984-47576003 None:intergenic 30.0%
TATGCCAAAGATATGCTAAT+CGG - chr8_2:47576075-47576094 Msa1251470:intron 30.0%
! TTTTCCGATTAGCATATCTT+TGG + chr8_2:47576082-47576101 None:intergenic 30.0%
GATATGCTAATCGGAAAATA+AGG - chr8_2:47576084-47576103 Msa1251470:intron 30.0%
! TTTTTCATCATGATAGAGAC+TGG - chr8_2:47576218-47576237 Msa1251470:intron 30.0%
!! AACAGCAACATCTTTTAGTT+AGG + chr8_2:47576492-47576511 None:intergenic 30.0%
TCAACACAACATATATCACA+AGG + chr8_2:47576692-47576711 None:intergenic 30.0%
AAAATCAGTAAGTTCCTTAG+GGG - chr8_2:47576812-47576831 Msa1251470:CDS 30.0%
TTTGGACACAAATTATACAG+AGG + chr8_2:47576923-47576942 None:intergenic 30.0%
! ATGTTATGCGCATTCTATTT+TGG + chr8_2:47576941-47576960 None:intergenic 30.0%
TAACAAGAGCCATGAAAATA+TGG - chr8_2:47577037-47577056 Msa1251470:CDS 30.0%
TCTAGGTTTACTATAGGTAT+AGG + chr8_2:47577068-47577087 None:intergenic 30.0%
TGAATTGAATATCGAGATGG+GGG + chr8_2:47568890-47568909 None:intergenic 35.0%
! TGACAACAACTGACTTTGTT+TGG + chr8_2:47568930-47568949 None:intergenic 35.0%
CAGTTGTTGTCAAACAAAGA+TGG - chr8_2:47568938-47568957 Msa1251470:three_prime_UTR 35.0%
CAAAAAGATTCTTGCTCCTA+TGG - chr8_2:47568971-47568990 Msa1251470:three_prime_UTR 35.0%
!! AATTTTGGCGTGAAAGAGAA+GGG + chr8_2:47569019-47569038 None:intergenic 35.0%
AGATTACTAGCTGCTGAATA+TGG - chr8_2:47569126-47569145 Msa1251470:three_prime_UTR 35.0%
TATGGTGCAGATATCACTTA+CGG - chr8_2:47569144-47569163 Msa1251470:three_prime_UTR 35.0%
! TGGAGCATCACAATAATTTG+TGG + chr8_2:47569535-47569554 None:intergenic 35.0%
TATTACTGATAAATGGGCCT+TGG - chr8_2:47569575-47569594 Msa1251470:intron 35.0%
ATTACTGATAAATGGGCCTT+GGG - chr8_2:47569576-47569595 Msa1251470:intron 35.0%
GTTATAAACTAATTGCGAGG+GGG - chr8_2:47569637-47569656 Msa1251470:CDS 35.0%
TTATAAACTAATTGCGAGGG+GGG - chr8_2:47569638-47569657 Msa1251470:CDS 35.0%
! ATCTCAACACGTTTTCAGTT+GGG - chr8_2:47569693-47569712 Msa1251470:CDS 35.0%
TATCCAACTAATGTTACCCT+CGG + chr8_2:47569758-47569777 None:intergenic 35.0%
AGAAATAAAGAGGGGTGAAT+TGG - chr8_2:47569843-47569862 Msa1251470:intron 35.0%
! TCAACGTTTTGTACATAGGT+TGG - chr8_2:47569970-47569989 Msa1251470:intron 35.0%
TCGTTCCATATTGAAGTTAG+AGG - chr8_2:47570007-47570026 Msa1251470:intron 35.0%
CGTTCCATATTGAAGTTAGA+GGG - chr8_2:47570008-47570027 Msa1251470:intron 35.0%
!!! AAGTTAGAGGGTTTTAGACA+AGG - chr8_2:47570020-47570039 Msa1251470:intron 35.0%
GCAAACATAATCGAAAGTCA+TGG + chr8_2:47570066-47570085 None:intergenic 35.0%
ATAAACTGCACAAACACATG+GGG + chr8_2:47570524-47570543 None:intergenic 35.0%
GATAAACTGCACAAACACAT+GGG + chr8_2:47570525-47570544 None:intergenic 35.0%
TGATAAACTGCACAAACACA+TGG + chr8_2:47570526-47570545 None:intergenic 35.0%
TTTGTGCAGTTTATCATCAC+TGG - chr8_2:47570530-47570549 Msa1251470:intron 35.0%
ATTTCTTGGTCAGAACATCT+TGG - chr8_2:47570635-47570654 Msa1251470:intron 35.0%
! TTGGTTGTCATTGTTGTTGT+TGG - chr8_2:47570942-47570961 Msa1251470:intron 35.0%
ATTCCACGATGATGTATGTA+TGG - chr8_2:47571119-47571138 Msa1251470:intron 35.0%
GATGATGTATGTATGGTGAT+AGG - chr8_2:47571126-47571145 Msa1251470:intron 35.0%
! TGTATGGTGATAGGTATTGT+AGG - chr8_2:47571135-47571154 Msa1251470:intron 35.0%
GGGGTGATTAGAGAAATATA+AGG - chr8_2:47571194-47571213 Msa1251470:intron 35.0%
GCATGCTGCCAATAAATAAA+AGG - chr8_2:47571216-47571235 Msa1251470:intron 35.0%
!! TCTCAGCCCCTTTTATTTAT+TGG + chr8_2:47571227-47571246 None:intergenic 35.0%
AATAAATAAAAGGGGCTGAG+AGG - chr8_2:47571226-47571245 Msa1251470:intron 35.0%
GTTAGCAATTAATAAGCACC+AGG + chr8_2:47571383-47571402 None:intergenic 35.0%
ATCAATGCACTATTTCCAGT+AGG + chr8_2:47571726-47571745 None:intergenic 35.0%
! TGCTGCTTATAAAGAAGAAG+AGG - chr8_2:47571900-47571919 Msa1251470:intron 35.0%
GCTGCTTATAAAGAAGAAGA+GGG - chr8_2:47571901-47571920 Msa1251470:intron 35.0%
CTGCTTATAAAGAAGAAGAG+GGG - chr8_2:47571902-47571921 Msa1251470:intron 35.0%
GGCTATATTGTTGCAAAGAA+GGG + chr8_2:47571986-47572005 None:intergenic 35.0%
TGGCTATATTGTTGCAAAGA+AGG + chr8_2:47571987-47572006 None:intergenic 35.0%
TGCATGTGTGAAAATCTGAT+GGG + chr8_2:47572013-47572032 None:intergenic 35.0%
! TATTGTTGCTTGGTTGTGAT+AGG - chr8_2:47572330-47572349 Msa1251470:intron 35.0%
TGATAGGATATTGGAGGATT+TGG - chr8_2:47572346-47572365 Msa1251470:intron 35.0%
GATAGGATATTGGAGGATTT+GGG - chr8_2:47572347-47572366 Msa1251470:intron 35.0%
TTAGAGTGGAATGCTGATAT+GGG - chr8_2:47572401-47572420 Msa1251470:CDS 35.0%
!! TGGGTAGTTTGTTTGTTAAG+TGG - chr8_2:47572420-47572439 Msa1251470:CDS 35.0%
!! GGGTAGTTTGTTTGTTAAGT+GGG - chr8_2:47572421-47572440 Msa1251470:CDS 35.0%
AGATCTTAACAACATTACGG+AGG - chr8_2:47572568-47572587 Msa1251470:intron 35.0%
GAATCTTACATGTTACAGGT+AGG + chr8_2:47572602-47572621 None:intergenic 35.0%
AGTCGAATCTTACATGTTAC+AGG + chr8_2:47572606-47572625 None:intergenic 35.0%
AAAATTACCGCATGATACAG+TGG - chr8_2:47572629-47572648 Msa1251470:intron 35.0%
AATTTGGAGATTACCTTCCA+TGG + chr8_2:47572701-47572720 None:intergenic 35.0%
TTCAGGACCTTTCCAAATTA+AGG - chr8_2:47572732-47572751 Msa1251470:intron 35.0%
TCAGGACCTTTCCAAATTAA+GGG - chr8_2:47572733-47572752 Msa1251470:intron 35.0%
! TGTTTCCCCTTAATTTGGAA+AGG + chr8_2:47572742-47572761 None:intergenic 35.0%
! ATGGTTGTTTCCCCTTAATT+TGG + chr8_2:47572747-47572766 None:intergenic 35.0%
ATTAAGGGGAAACAACCATA+TGG - chr8_2:47572748-47572767 Msa1251470:intron 35.0%
GTTCTCAAATCAGTCAAAGT+AGG - chr8_2:47572914-47572933 Msa1251470:intron 35.0%
CCGAAAACAGTTAACATATC+TGG + chr8_2:47572951-47572970 None:intergenic 35.0%
ACTACAAGATGCCAAACTAT+TGG - chr8_2:47572992-47573011 Msa1251470:intron 35.0%
!! GCTAAGCCAATGTTCTAAAA+AGG + chr8_2:47573129-47573148 None:intergenic 35.0%
! AAATCCAATATGTCGTTTGG+CGG - chr8_2:47573198-47573217 Msa1251470:intron 35.0%
GTATTGTTTGTAAGTGCACA+TGG + chr8_2:47573419-47573438 None:intergenic 35.0%
!! ACATCACCATTTGCTATAAC+TGG + chr8_2:47573602-47573621 None:intergenic 35.0%
TTGCAACAGAACATGAAGTA+AGG + chr8_2:47573795-47573814 None:intergenic 35.0%
CATTAACAAGGACAGAGATT+AGG + chr8_2:47573818-47573837 None:intergenic 35.0%
AAACATTCCTGCAGAATTGA+GGG + chr8_2:47573988-47574007 None:intergenic 35.0%
TCAATTCTGCAGGAATGTTT+GGG - chr8_2:47573988-47574007 Msa1251470:intron 35.0%
CTTGATCCAAAACGTTTGTT+GGG + chr8_2:47574036-47574055 None:intergenic 35.0%
TTACCAATAAGATGATGTGG+CGG + chr8_2:47574059-47574078 None:intergenic 35.0%
! CTGAGTTGAAGTTACACAAA+TGG + chr8_2:47574093-47574112 None:intergenic 35.0%
! GAATGTCAAGTGTTGTCATA+TGG + chr8_2:47574149-47574168 None:intergenic 35.0%
AAAGATGATGAGATGAGAAG+AGG - chr8_2:47574630-47574649 Msa1251470:intron 35.0%
GAAATCTCTGTTGTCAATAG+CGG + chr8_2:47574969-47574988 None:intergenic 35.0%
!!! TGGTGTTACTTTTGTAACCT+TGG + chr8_2:47575098-47575117 None:intergenic 35.0%
TCAGTTTAGTCCAATCTCTT+TGG + chr8_2:47575118-47575137 None:intergenic 35.0%
!! TTACCTTTATCGACTCACAA+GGG + chr8_2:47575246-47575265 None:intergenic 35.0%
TACGAGTGGCCTATATATAT+CGG + chr8_2:47575461-47575480 None:intergenic 35.0%
CGATTAGCATTTATTACGAG+TGG + chr8_2:47575475-47575494 None:intergenic 35.0%
ACGTAGACATCTCCAATTTA+AGG + chr8_2:47575570-47575589 None:intergenic 35.0%
GACTATTCACCAATTTAAGG+GGG + chr8_2:47575605-47575624 None:intergenic 35.0%
! TACTTGCAAGTTGAGAATGA+TGG + chr8_2:47575630-47575649 None:intergenic 35.0%
!!! GCTACCAAATGTTTTGACAA+GGG + chr8_2:47575679-47575698 None:intergenic 35.0%
!!! AGCTACCAAATGTTTTGACA+AGG + chr8_2:47575680-47575699 None:intergenic 35.0%
! TTGTCAAAACATTTGGTAGC+TGG - chr8_2:47575679-47575698 Msa1251470:intron 35.0%
AAGGAACTGAAGATAGTTTC+TGG - chr8_2:47575709-47575728 Msa1251470:intron 35.0%
TGTGTATACTAGGATCTTGT+GGG + chr8_2:47575809-47575828 None:intergenic 35.0%
ATGTGTATACTAGGATCTTG+TGG + chr8_2:47575810-47575829 None:intergenic 35.0%
ACAAGATCCTAGTATACACA+TGG - chr8_2:47575809-47575828 Msa1251470:intron 35.0%
TCTCTATCCATGTGTATACT+AGG + chr8_2:47575819-47575838 None:intergenic 35.0%
ATGGATAGAGATCGAGTTTA+TGG - chr8_2:47575828-47575847 Msa1251470:intron 35.0%
AGATTGGAGTTCAATAGTTC+TGG - chr8_2:47575909-47575928 Msa1251470:intron 35.0%
CGATAAGAGAACTACAATGA+AGG - chr8_2:47575940-47575959 Msa1251470:intron 35.0%
TAAGAGAACTACAATGAAGG+CGG - chr8_2:47575943-47575962 Msa1251470:intron 35.0%
ATAAACAACTCCTGATCTTG+GGG + chr8_2:47575983-47576002 None:intergenic 35.0%
GTATAAACAACTCCTGATCT+TGG + chr8_2:47575985-47576004 None:intergenic 35.0%
TCAGAAGCTCAATTCTCATA+TGG + chr8_2:47576007-47576026 None:intergenic 35.0%
! AGATATCTCTAAGGGTAGAA+TGG + chr8_2:47576164-47576183 None:intergenic 35.0%
CAGATTGCAGATATCTCTAA+GGG + chr8_2:47576172-47576191 None:intergenic 35.0%
! AATTGACATGGTTTGGCATA+AGG - chr8_2:47576267-47576286 Msa1251470:intron 35.0%
CCTTCAGGTGAAAATATTGA+AGG + chr8_2:47576333-47576352 None:intergenic 35.0%
! CCTTCAATATTTTCACCTGA+AGG - chr8_2:47576330-47576349 Msa1251470:intron 35.0%
! TTTGATTTCAGTGCATCTTG+TGG - chr8_2:47576519-47576538 Msa1251470:intron 35.0%
TTGATTTCAGTGCATCTTGT+GGG - chr8_2:47576520-47576539 Msa1251470:intron 35.0%
AAGCACCAAGCATACATTAA+GGG - chr8_2:47576556-47576575 Msa1251470:intron 35.0%
CATATCCCTTAATGTATGCT+TGG + chr8_2:47576564-47576583 None:intergenic 35.0%
AAAATCAAAACAGCCTGACT+AGG + chr8_2:47576861-47576880 None:intergenic 35.0%
TCTTGTTAGTATTCAGACCA+AGG + chr8_2:47577025-47577044 None:intergenic 35.0%
GTTTACTATAGGTATAGGAC+AGG + chr8_2:47577063-47577082 None:intergenic 35.0%
AAAGAATTTCTCTCCAACTC+AGG - chr8_2:47577111-47577130 Msa1251470:five_prime_UTR 35.0%
GAATTGAATATCGAGATGGG+GGG + chr8_2:47568889-47568908 None:intergenic 40.0%
!! GAATTTTGGCGTGAAAGAGA+AGG + chr8_2:47569020-47569039 None:intergenic 40.0%
TCAGCAGCTAGTAATCTAAG+TGG + chr8_2:47569123-47569142 None:intergenic 40.0%
CAATTGCATAGCAGCTACAA+TGG - chr8_2:47569308-47569327 Msa1251470:three_prime_UTR 40.0%
GAGGAGAAAATGTAGACAAG+TGG - chr8_2:47569428-47569447 Msa1251470:CDS 40.0%
! CATCTCAACACGTTTTCAGT+TGG - chr8_2:47569692-47569711 Msa1251470:CDS 40.0%
! TCTCAACACGTTTTCAGTTG+GGG - chr8_2:47569694-47569713 Msa1251470:CDS 40.0%
!! AACCCCTTTTGGCTATAATC+TGG - chr8_2:47569724-47569743 Msa1251470:intron 40.0%
AGCCAGATTATAGCCAAAAG+GGG + chr8_2:47569729-47569748 None:intergenic 40.0%
GAGCCAGATTATAGCCAAAA+GGG + chr8_2:47569730-47569749 None:intergenic 40.0%
ATCCAACTAATGTTACCCTC+GGG + chr8_2:47569757-47569776 None:intergenic 40.0%
!! ACGTTTTGTACATAGGTTGG+AGG - chr8_2:47569973-47569992 Msa1251470:intron 40.0%
! TTTGTACATAGGTTGGAGGA+TGG - chr8_2:47569977-47569996 Msa1251470:intron 40.0%
!!! TAGAGGGTTTTAGACAAGGA+AGG - chr8_2:47570024-47570043 Msa1251470:intron 40.0%
!!! TCTTGGATCCACTGATTTTG+TGG - chr8_2:47570652-47570671 Msa1251470:intron 40.0%
!!! TCCACTGATTTTGTGGAGAA+AGG - chr8_2:47570659-47570678 Msa1251470:intron 40.0%
!!! CCACTGATTTTGTGGAGAAA+GGG - chr8_2:47570660-47570679 Msa1251470:intron 40.0%
! TGATTTTGTGGAGAAAGGGA+CGG - chr8_2:47570664-47570683 Msa1251470:intron 40.0%
! GGTGTATTTGGAATTGGAAG+AGG + chr8_2:47571083-47571102 None:intergenic 40.0%
TCACCATACATACATCATCG+TGG + chr8_2:47571125-47571144 None:intergenic 40.0%
TGTTAGTGAATTTGGGCGTT+AGG - chr8_2:47571267-47571286 Msa1251470:intron 40.0%
TAACAGAGTGATAGCTCATC+TGG - chr8_2:47571399-47571418 Msa1251470:intron 40.0%
AACAGAGTGATAGCTCATCT+GGG - chr8_2:47571400-47571419 Msa1251470:intron 40.0%
ATCTGGCAGTTATCTGTAAC+TGG - chr8_2:47571541-47571560 Msa1251470:intron 40.0%
TATCTGTAACTGGATCACGA+CGG - chr8_2:47571551-47571570 Msa1251470:intron 40.0%
ACAATCTAGTCCATCTACCA+TGG + chr8_2:47571594-47571613 None:intergenic 40.0%
!! TTGTATGGCTGTCCTTGTTT+TGG - chr8_2:47571686-47571705 Msa1251470:intron 40.0%
!!! TCCTTGTTTTGGACAGTGTT+TGG - chr8_2:47571697-47571716 Msa1251470:intron 40.0%
!!! CCTTGTTTTGGACAGTGTTT+GGG - chr8_2:47571698-47571717 Msa1251470:intron 40.0%
! TTACAGAACCCTTTTCCATG+AGG - chr8_2:47571791-47571810 Msa1251470:intron 40.0%
TACCTTGTCCTCATGGAAAA+GGG + chr8_2:47571802-47571821 None:intergenic 40.0%
TTACCTTGTCCTCATGGAAA+AGG + chr8_2:47571803-47571822 None:intergenic 40.0%
TTCCATGAGGACAAGGTAAT+AGG - chr8_2:47571804-47571823 Msa1251470:intron 40.0%
TCCATGAGGACAAGGTAATA+GGG - chr8_2:47571805-47571824 Msa1251470:intron 40.0%
ATAAAGAAGAAGAGGGGTTG+AGG - chr8_2:47571908-47571927 Msa1251470:intron 40.0%
TAAAGAAGAAGAGGGGTTGA+GGG - chr8_2:47571909-47571928 Msa1251470:intron 40.0%
! GGAGAGATGACTAGTCATTT+CGG - chr8_2:47571932-47571951 Msa1251470:intron 40.0%
TGTGAAAATCTGATGGGAAC+TGG + chr8_2:47572007-47572026 None:intergenic 40.0%
GTGCATGTGTGAAAATCTGA+TGG + chr8_2:47572014-47572033 None:intergenic 40.0%
! AGATTTTCACACATGCACTG+AGG - chr8_2:47572016-47572035 Msa1251470:intron 40.0%
CACTCAAAGAAAATGCCTTG+GGG + chr8_2:47572248-47572267 None:intergenic 40.0%
CCACTCAAAGAAAATGCCTT+GGG + chr8_2:47572249-47572268 None:intergenic 40.0%
ACCACTCAAAGAAAATGCCT+TGG + chr8_2:47572250-47572269 None:intergenic 40.0%
!! AAGGCATTTTCTTTGAGTGG+TGG - chr8_2:47572249-47572268 Msa1251470:intron 40.0%
! AGGCATTTTCTTTGAGTGGT+GGG - chr8_2:47572250-47572269 Msa1251470:intron 40.0%
!! ATTTTCTTTGAGTGGTGGGA+TGG - chr8_2:47572254-47572273 Msa1251470:intron 40.0%
!! TTTTCTTTGAGTGGTGGGAT+GGG - chr8_2:47572255-47572274 Msa1251470:intron 40.0%
! ATCACTGATAAGCTCTGGTT+TGG + chr8_2:47572295-47572314 None:intergenic 40.0%
CTTACATCACTGATAAGCTC+TGG + chr8_2:47572300-47572319 None:intergenic 40.0%
GCTTGGTTGTGATAGGATAT+TGG - chr8_2:47572337-47572356 Msa1251470:intron 40.0%
TGGTTGTGATAGGATATTGG+AGG - chr8_2:47572340-47572359 Msa1251470:intron 40.0%
TCATGTTCAGCACAGATGTT+GGG + chr8_2:47572379-47572398 None:intergenic 40.0%
TTCATGTTCAGCACAGATGT+TGG + chr8_2:47572380-47572399 None:intergenic 40.0%
TGCTGAACATGAAGTTAGAG+TGG - chr8_2:47572387-47572406 Msa1251470:CDS 40.0%
GTTAGAGTGGAATGCTGATA+TGG - chr8_2:47572400-47572419 Msa1251470:CDS 40.0%
! TGGGAAATTATAGGGAGTGT+AGG - chr8_2:47572440-47572459 Msa1251470:CDS 40.0%
! GGGAAATTATAGGGAGTGTA+GGG - chr8_2:47572441-47572460 Msa1251470:CDS 40.0%
! GGAAATTATAGGGAGTGTAG+GGG - chr8_2:47572442-47572461 Msa1251470:CDS 40.0%
! GAAATTATAGGGAGTGTAGG+GGG - chr8_2:47572443-47572462 Msa1251470:CDS 40.0%
! AAATTATAGGGAGTGTAGGG+GGG - chr8_2:47572444-47572463 Msa1251470:CDS 40.0%
CAGGACCTTTCCAAATTAAG+GGG - chr8_2:47572734-47572753 Msa1251470:intron 40.0%
GTAGGATGATGCTTGTTCAT+TGG + chr8_2:47572819-47572838 None:intergenic 40.0%
ACAAGCATCATCCTACTAGT+CGG - chr8_2:47572823-47572842 Msa1251470:intron 40.0%
ATCTACGTAAACCGACTAGT+AGG + chr8_2:47572837-47572856 None:intergenic 40.0%
!! AGATAGTGCTGACACAACAT+CGG + chr8_2:47573576-47573595 None:intergenic 40.0%
CTGTAGCAGATTTAATGCGT+TGG + chr8_2:47573643-47573662 None:intergenic 40.0%
CAACGCATTAAATCTGCTAC+AGG - chr8_2:47573641-47573660 Msa1251470:intron 40.0%
ACTCAATCTCTTGGAAAGTG+AGG - chr8_2:47573878-47573897 Msa1251470:intron 40.0%
GAATTGAGGGGAATCTATCA+CGG + chr8_2:47573975-47573994 None:intergenic 40.0%
AACATTCCTGCAGAATTGAG+GGG + chr8_2:47573987-47574006 None:intergenic 40.0%
CAAACATTCCTGCAGAATTG+AGG + chr8_2:47573989-47574008 None:intergenic 40.0%
CTCAATTCTGCAGGAATGTT+TGG - chr8_2:47573987-47574006 Msa1251470:intron 40.0%
AATGTTTGGGCAAATCCCTT+AGG - chr8_2:47574001-47574020 Msa1251470:intron 40.0%
! ATCCAAAACGTTTGTTGGGA+AGG + chr8_2:47574032-47574051 None:intergenic 40.0%
GCTTGATCCAAAACGTTTGT+TGG + chr8_2:47574037-47574056 None:intergenic 40.0%
!! ATGACTAGCTTTCCCTGAAA+GGG + chr8_2:47574116-47574135 None:intergenic 40.0%
!! TATGACTAGCTTTCCCTGAA+AGG + chr8_2:47574117-47574136 None:intergenic 40.0%
! TGTCAAGTGTTGTCATATGG+AGG + chr8_2:47574146-47574165 None:intergenic 40.0%
CTGTTGTTAAAGCGGAAATG+CGG - chr8_2:47574200-47574219 Msa1251470:intron 40.0%
!! GCTTTAGAGGCTTAAAGTGT+TGG + chr8_2:47574466-47574485 None:intergenic 40.0%
AGAGATGATGAGATGAGAAG+AGG - chr8_2:47574587-47574606 Msa1251470:intron 40.0%
AGAGATGATGAGATGAGAAG+AGG - chr8_2:47574587-47574606 Msa1251470:intron 40.0%
CGATGAAGAAGTTGTGTTTG+CGG - chr8_2:47574719-47574738 Msa1251470:intron 40.0%
TGTGTTTGCGGATGTGTATA+TGG - chr8_2:47574731-47574750 Msa1251470:intron 40.0%
!! GTTACCTTTATCGACTCACA+AGG + chr8_2:47575247-47575266 None:intergenic 40.0%
TACAACACTCCCCCTTAAAT+TGG - chr8_2:47575593-47575612 Msa1251470:intron 40.0%
! GAACTGAAGATAGTTTCTGG+CGG - chr8_2:47575712-47575731 Msa1251470:intron 40.0%
!! AACTGAAGATAGTTTCTGGC+GGG - chr8_2:47575713-47575732 Msa1251470:intron 40.0%
AAGAGAACTACAATGAAGGC+GGG - chr8_2:47575944-47575963 Msa1251470:intron 40.0%
GCAGATTGCAGATATCTCTA+AGG + chr8_2:47576173-47576192 None:intergenic 40.0%
TCATAAGAAACTTCGCCTTC+AGG + chr8_2:47576348-47576367 None:intergenic 40.0%
TGAAGGCGAAGTTTCTTATG+AGG - chr8_2:47576347-47576366 Msa1251470:intron 40.0%
! GAAGCACCAAGCATACATTA+AGG - chr8_2:47576555-47576574 Msa1251470:intron 40.0%
!! TTAGGGGACTAGTTGATCAT+GGG - chr8_2:47576828-47576847 Msa1251470:CDS 40.0%
TCACTTAGTAGACATGCAGT+GGG + chr8_2:47576985-47577004 None:intergenic 40.0%
! GGAGGATCTGAAATAATCCT+TGG - chr8_2:47577005-47577024 Msa1251470:intron 40.0%
! TAGGACAGGCCATATTTTCA+TGG + chr8_2:47577049-47577068 None:intergenic 40.0%
AAACTCACAACGCGAACCAT+AGG + chr8_2:47568990-47569009 None:intergenic 45.0%
AAATGCGAACGCCGAATCAA+CGG - chr8_2:47569195-47569214 Msa1251470:three_prime_UTR 45.0%
! GGAAGAGTGTACCGTTGATT+CGG + chr8_2:47569209-47569228 None:intergenic 45.0%
TTTGCTTCCGCTTCTGTCTA+CGG + chr8_2:47569457-47569476 None:intergenic 45.0%
GGGCGGATATGAATATGCAA+AGG - chr8_2:47569658-47569677 Msa1251470:CDS 45.0%
GGAGCCAGATTATAGCCAAA+AGG + chr8_2:47569731-47569750 None:intergenic 45.0%
TCCAACTAATGTTACCCTCG+GGG + chr8_2:47569756-47569775 None:intergenic 45.0%
CCCTTTCTCCACAAAATCAG+TGG + chr8_2:47570663-47570682 None:intergenic 45.0%
CACTAACTGAGCAGCAGTTA+GGG + chr8_2:47570768-47570787 None:intergenic 45.0%
ACACTAACTGAGCAGCAGTT+AGG + chr8_2:47570769-47570788 None:intergenic 45.0%
TACCTGACTGACTAACCAAG+GGG + chr8_2:47571164-47571183 None:intergenic 45.0%
CTACCTGACTGACTAACCAA+GGG + chr8_2:47571165-47571184 None:intergenic 45.0%
ACTACCTGACTGACTAACCA+AGG + chr8_2:47571166-47571185 None:intergenic 45.0%
GTTAGTCAGTCAGGTAGTTG+CGG - chr8_2:47571168-47571187 Msa1251470:intron 45.0%
TTAGTCAGTCAGGTAGTTGC+GGG - chr8_2:47571169-47571188 Msa1251470:intron 45.0%
ACAGAGTGATAGCTCATCTG+GGG - chr8_2:47571401-47571420 Msa1251470:intron 45.0%
ACCATGGTCCCAGTGATAAA+GGG + chr8_2:47571578-47571597 None:intergenic 45.0%
TACCATGGTCCCAGTGATAA+AGG + chr8_2:47571579-47571598 None:intergenic 45.0%
!! TTAAAAGTGTCGGACAAGCG+CGG + chr8_2:47571619-47571638 None:intergenic 45.0%
! CTCGGTCGTATTTGTTGGAA+GGG + chr8_2:47571659-47571678 None:intergenic 45.0%
CCCAAACACTGTCCAAAACA+AGG + chr8_2:47571701-47571720 None:intergenic 45.0%
! AACCCTTTTCCATGAGGACA+AGG - chr8_2:47571797-47571816 Msa1251470:intron 45.0%
CCATGAGGACAAGGTAATAG+GGG - chr8_2:47571806-47571825 Msa1251470:intron 45.0%
AAAGAAGAAGAGGGGTTGAG+GGG - chr8_2:47571910-47571929 Msa1251470:intron 45.0%
! GAGATGACTAGTCATTTCGG+CGG - chr8_2:47571935-47571954 Msa1251470:intron 45.0%
! AGATGACTAGTCATTTCGGC+GGG - chr8_2:47571936-47571955 Msa1251470:intron 45.0%
TATTAACATGGGATGCCCCA+AGG - chr8_2:47572230-47572249 Msa1251470:intron 45.0%
!! CCCAAGGCATTTTCTTTGAG+TGG - chr8_2:47572246-47572265 Msa1251470:intron 45.0%
! ACCAGTTTTCTCAATTCGCC+TGG + chr8_2:47572661-47572680 None:intergenic 45.0%
CAATATGGCTGTTAGTGTCG+TGG - chr8_2:47573158-47573177 Msa1251470:intron 45.0%
CTAACCGCCAAACGACATAT+TGG + chr8_2:47573205-47573224 None:intergenic 45.0%
! CAATATGTCGTTTGGCGGTT+AGG - chr8_2:47573203-47573222 Msa1251470:intron 45.0%
CAAAAGCAGAAGTCGCATAG+TGG - chr8_2:47573234-47573253 Msa1251470:intron 45.0%
TCTGTAGTCAATTGCAGTGG+TGG - chr8_2:47573344-47573363 Msa1251470:CDS 45.0%
TGTAAGTGCACATGGGTATG+TGG + chr8_2:47573411-47573430 None:intergenic 45.0%
TGCATATTCCTTGCCCTCTT+AGG - chr8_2:47573949-47573968 Msa1251470:intron 45.0%
GAATCTATCACGGCCTAAGA+GGG + chr8_2:47573965-47573984 None:intergenic 45.0%
TAGATTCCCCTCAATTCTGC+AGG - chr8_2:47573978-47573997 Msa1251470:intron 45.0%
! AGCCTTCCCAACAAACGTTT+TGG - chr8_2:47574027-47574046 Msa1251470:intron 45.0%
AAGCCGCCACATCATCTTAT+TGG - chr8_2:47574053-47574072 Msa1251470:intron 45.0%
AACTTCAACTCAGCCCTTTC+AGG - chr8_2:47574100-47574119 Msa1251470:intron 45.0%
ACTTCAACTCAGCCCTTTCA+GGG - chr8_2:47574101-47574120 Msa1251470:intron 45.0%
TGAGATGAGAAGAGGAGAGA+TGG - chr8_2:47574595-47574614 Msa1251470:intron 45.0%
GAGATGAGAAGAGGAGAGAT+GGG - chr8_2:47574596-47574615 Msa1251470:intron 45.0%
TGAGATGAGAAGAGGAGAGA+TGG - chr8_2:47574595-47574614 Msa1251470:intron 45.0%
GAGATGAGAAGAGGAGAGAT+GGG - chr8_2:47574596-47574615 Msa1251470:intron 45.0%
GATGAGATGAGAAGAGGAGA+TGG - chr8_2:47574593-47574612 Msa1251470:intron 45.0%
! GCGTCGCGTTTTACTGTTTT+TGG - chr8_2:47574917-47574936 Msa1251470:intron 45.0%
!!! GTGTATTTTTGGGGACACAG+TGG - chr8_2:47575144-47575163 Msa1251470:intron 45.0%
ATGTATGACGTGGCTTACCA+AGG - chr8_2:47575196-47575215 Msa1251470:intron 45.0%
AGTCCCTTGTGAGTCGATAA+AGG - chr8_2:47575240-47575259 Msa1251470:CDS 45.0%
! TTTGGTAGCTGGTATCGAGA+AGG - chr8_2:47575690-47575709 Msa1251470:intron 45.0%
!! ACTGAAGATAGTTTCTGGCG+GGG - chr8_2:47575714-47575733 Msa1251470:intron 45.0%
GAGTAGCTAAGGGACAAGAA+GGG + chr8_2:47575776-47575795 None:intergenic 45.0%
AGGACGATTGGAGTAGCTAA+GGG + chr8_2:47575786-47575805 None:intergenic 45.0%
GTATACTAGGATCTTGTGGG+AGG + chr8_2:47575806-47575825 None:intergenic 45.0%
! AACTACAATGAAGGCGGGTT+CGG - chr8_2:47575949-47575968 Msa1251470:intron 45.0%
! TTTGGCATAAGGTGCTTCGT+CGG - chr8_2:47576278-47576297 Msa1251470:intron 45.0%
!! TCATATGCACTATCGGCTTG+TGG - chr8_2:47576456-47576475 Msa1251470:intron 45.0%
!! CATATGCACTATCGGCTTGT+GGG - chr8_2:47576457-47576476 Msa1251470:intron 45.0%
TCTTGAAGTCCCTGAATGGA+GGG - chr8_2:47576601-47576620 Msa1251470:intron 45.0%
AACTTACGCTATCTCTGCTG+TGG + chr8_2:47576645-47576664 None:intergenic 45.0%
CATGATCAACTAGTCCCCTA+AGG + chr8_2:47576829-47576848 None:intergenic 45.0%
!! CTTAGGGGACTAGTTGATCA+TGG - chr8_2:47576827-47576846 Msa1251470:CDS 45.0%
!! TAGGGGACTAGTTGATCATG+GGG - chr8_2:47576829-47576848 Msa1251470:CDS 45.0%
CTCACTTAGTAGACATGCAG+TGG + chr8_2:47576986-47577005 None:intergenic 45.0%
CACTGCATGTCTACTAAGTG+AGG - chr8_2:47576984-47577003 Msa1251470:intron 45.0%
TGCATGTCTACTAAGTGAGG+AGG - chr8_2:47576987-47577006 Msa1251470:intron 45.0%
CTCCAACTCAGGATACCAAA+TGG - chr8_2:47577122-47577141 Msa1251470:five_prime_UTR 45.0%
!! ATATAATTTATATTCATAAT+TGG - chr8_2:47573090-47573109 Msa1251470:intron 5.0%
!! TATAATTTATATTCATAATT+GGG - chr8_2:47573091-47573110 Msa1251470:intron 5.0%
!!! TAATTGTTAAATTTTTAATT+GGG + chr8_2:47574536-47574555 None:intergenic 5.0%
!!! TTAATTGTTAAATTTTTAAT+TGG + chr8_2:47574537-47574556 None:intergenic 5.0%
! GAGATGGGGGGATTTTTCTG+AGG + chr8_2:47568877-47568896 None:intergenic 50.0%
AGAAGCGGAAGCAAAGCTAG+TGG - chr8_2:47569462-47569481 Msa1251470:CDS 50.0%
TAAACTAATTGCGAGGGGGG+CGG - chr8_2:47569641-47569660 Msa1251470:CDS 50.0%
! CAACACGTTTTCAGTTGGGG+TGG - chr8_2:47569697-47569716 Msa1251470:CDS 50.0%
ACTAATGTTACCCTCGGGGA+CGG + chr8_2:47569752-47569771 None:intergenic 50.0%
TCCCCGAGGGTAACATTAGT+TGG - chr8_2:47569752-47569771 Msa1251470:intron 50.0%
! AGGTATTGTAGGCAACCCCT+TGG - chr8_2:47571146-47571165 Msa1251470:intron 50.0%
! AACCCCTTGGTTAGTCAGTC+AGG - chr8_2:47571159-47571178 Msa1251470:intron 50.0%
GTGAATTTGGGCGTTAGGTC+AGG - chr8_2:47571272-47571291 Msa1251470:intron 50.0%
ATTTGGGCGTTAGGTCAGGA+AGG - chr8_2:47571276-47571295 Msa1251470:intron 50.0%
ACGACGGTCCCTTTATCACT+GGG - chr8_2:47571567-47571586 Msa1251470:intron 50.0%
TCCCTTTATCACTGGGACCA+TGG - chr8_2:47571574-47571593 Msa1251470:intron 50.0%
ATCACTGGGACCATGGTAGA+TGG - chr8_2:47571581-47571600 Msa1251470:intron 50.0%
!! TAAAAGTGTCGGACAAGCGC+GGG + chr8_2:47571618-47571637 None:intergenic 50.0%
! CCTCGGTCGTATTTGTTGGA+AGG + chr8_2:47571660-47571679 None:intergenic 50.0%
CCTTCCAACAAATACGACCG+AGG - chr8_2:47571657-47571676 Msa1251470:intron 50.0%
CCAACCTCGGTCGTATTTGT+TGG + chr8_2:47571664-47571683 None:intergenic 50.0%
CCAACAAATACGACCGAGGT+TGG - chr8_2:47571661-47571680 Msa1251470:intron 50.0%
CAGCCATACAACTCCAACCT+CGG + chr8_2:47571677-47571696 None:intergenic 50.0%
GACAGTGTTTGGGAACCTAC+TGG - chr8_2:47571708-47571727 Msa1251470:intron 50.0%
CCCCTATTACCTTGTCCTCA+TGG + chr8_2:47571809-47571828 None:intergenic 50.0%
AAGAAGAAGAGGGGTTGAGG+GGG - chr8_2:47571911-47571930 Msa1251470:intron 50.0%
! TAGTCATTTCGGCGGGCTTT+AGG - chr8_2:47571943-47571962 Msa1251470:intron 50.0%
! AGTCATTTCGGCGGGCTTTA+GGG - chr8_2:47571944-47571963 Msa1251470:intron 50.0%
TCAGCACAGATGTTGGGCTT+AGG + chr8_2:47572373-47572392 None:intergenic 50.0%
GCAAGCTCCACTGTATCATG+CGG + chr8_2:47572639-47572658 None:intergenic 50.0%
ATGATACAGTGGAGCTTGCC+AGG - chr8_2:47572640-47572659 Msa1251470:intron 50.0%
GCCAGGCGAATTGAGAAAAC+TGG - chr8_2:47572657-47572676 Msa1251470:intron 50.0%
GTTGATGCTCTTGCAGTCCA+TGG - chr8_2:47572681-47572700 Msa1251470:intron 50.0%
ATGCTCTTGCAGTCCATGGA+AGG - chr8_2:47572685-47572704 Msa1251470:intron 50.0%
TCGTTTGGCGGTTAGGTTTG+TGG - chr8_2:47573210-47573229 Msa1251470:intron 50.0%
CGTTTGGCGGTTAGGTTTGT+GGG - chr8_2:47573211-47573230 Msa1251470:intron 50.0%
GGCTCTGTAGTCAATTGCAG+TGG - chr8_2:47573341-47573360 Msa1251470:CDS 50.0%
GTAGTCAATTGCAGTGGTGG+CGG - chr8_2:47573347-47573366 Msa1251470:CDS 50.0%
CTTAGATAGGCCCAGAGATC+CGG - chr8_2:47573532-47573551 Msa1251470:intron 50.0%
GCAATTCCACTCCACTTTGC+CGG + chr8_2:47573554-47573573 None:intergenic 50.0%
GGAATCTATCACGGCCTAAG+AGG + chr8_2:47573966-47573985 None:intergenic 50.0%
GTTGGGAAGGCTAAGCCTAA+GGG + chr8_2:47574019-47574038 None:intergenic 50.0%
TGTTGGGAAGGCTAAGCCTA+AGG + chr8_2:47574020-47574039 None:intergenic 50.0%
CGGTACCCCAAAAATTGACG+CGG - chr8_2:47574230-47574249 Msa1251470:intron 50.0%
CGCGATTGCAGGTATAAAGC+GGG + chr8_2:47574854-47574873 None:intergenic 50.0%
GCGCGATTGCAGGTATAAAG+CGG + chr8_2:47574855-47574874 None:intergenic 50.0%
TTTGGAGAAAGCGGCTGAAG+CGG + chr8_2:47574878-47574897 None:intergenic 50.0%
GGAGTAGCTAAGGGACAAGA+AGG + chr8_2:47575777-47575796 None:intergenic 50.0%
GAGGACGATTGGAGTAGCTA+AGG + chr8_2:47575787-47575806 None:intergenic 50.0%
GTCTAGGGACAACAAGCTCA+TGG - chr8_2:47575873-47575892 Msa1251470:intron 50.0%
GGAAGCAAAACCCCAAGATC+AGG - chr8_2:47575970-47575989 Msa1251470:intron 50.0%
! ATAAGGTGCTTCGTCGGTGA+TGG - chr8_2:47576284-47576303 Msa1251470:intron 50.0%
CCATTCAGGGACTTCAAGAG+AGG + chr8_2:47576600-47576619 None:intergenic 50.0%
CCTCTCTTGAAGTCCCTGAA+TGG - chr8_2:47576597-47576616 Msa1251470:intron 50.0%
CTCTTGAAGTCCCTGAATGG+AGG - chr8_2:47576600-47576619 Msa1251470:intron 50.0%
TGTGGTCTCGGATTTGACCA+CGG + chr8_2:47576627-47576646 None:intergenic 50.0%
CATGGGGTAGAATCCTAGTC+AGG - chr8_2:47576845-47576864 Msa1251470:CDS 50.0%
! AGAGGTCTAAGACCTTGTGC+GGG + chr8_2:47576905-47576924 None:intergenic 50.0%
! CAGAGGTCTAAGACCTTGTG+CGG + chr8_2:47576906-47576925 None:intergenic 50.0%
TAGTGGCGCGGAGGAATAAG+AGG - chr8_2:47569479-47569498 Msa1251470:intron 55.0%
CATCCGCATTGCTACTCCCA+AGG + chr8_2:47569595-47569614 None:intergenic 55.0%
CTTGGGAGTAGCAATGCGGA+TGG - chr8_2:47569593-47569612 Msa1251470:intron 55.0%
TAGGCACATCTGATGCCGTG+AGG - chr8_2:47570741-47570760 Msa1251470:intron 55.0%
AGGCACATCTGATGCCGTGA+GGG - chr8_2:47570742-47570761 Msa1251470:intron 55.0%
! GCTCATCTGGGGCAAGAATC+TGG - chr8_2:47571412-47571431 Msa1251470:intron 55.0%
CACGACGGTCCCTTTATCAC+TGG - chr8_2:47571566-47571585 Msa1251470:intron 55.0%
CGACCGAGGTTGGAGTTGTA+TGG - chr8_2:47571671-47571690 Msa1251470:intron 55.0%
!! TTTCGGCGGGCTTTAGGGAA+AGG - chr8_2:47571949-47571968 Msa1251470:intron 55.0%
CTCCACTTTGCCGGATCTCT+GGG + chr8_2:47573545-47573564 None:intergenic 55.0%
ACTCCACTTTGCCGGATCTC+TGG + chr8_2:47573546-47573565 None:intergenic 55.0%
AGAGATCCGGCAAAGTGGAG+TGG - chr8_2:47573545-47573564 Msa1251470:intron 55.0%
TATCACGGCCTAAGAGGGCA+AGG + chr8_2:47573960-47573979 None:intergenic 55.0%
GTTAAAGCGGAAATGCGGCG+CGG - chr8_2:47574205-47574224 Msa1251470:intron 55.0%
TTGGAGAAAGCGGCTGAAGC+GGG + chr8_2:47574877-47574896 None:intergenic 55.0%
TTTCTCCAAACGCTCCGCGT+TGG - chr8_2:47574888-47574907 Msa1251470:intron 55.0%
TTGTCAATAGCGGCCGAACG+CGG + chr8_2:47574959-47574978 None:intergenic 55.0%
ACACAGTGGCAGTGATGAGG+AGG - chr8_2:47575158-47575177 Msa1251470:intron 55.0%
GTAAGCAGCGTGATCAGCCT+TGG + chr8_2:47575216-47575235 None:intergenic 55.0%
GGATCTTGTGGGAGGACGAT+TGG + chr8_2:47575798-47575817 None:intergenic 55.0%
!! CTATCGGCTTGTGGGTGTCA+TGG - chr8_2:47576465-47576484 Msa1251470:intron 55.0%
CGCTATCTCTGCTGTGGTCT+CGG + chr8_2:47576639-47576658 None:intergenic 55.0%
! TCTAAGACCTTGTGCGGGGA+AGG + chr8_2:47576900-47576919 None:intergenic 55.0%
! GAGGTCTAAGACCTTGTGCG+GGG + chr8_2:47576904-47576923 None:intergenic 55.0%
GTGGCCACCGTAGACAGAAG+CGG - chr8_2:47569447-47569466 Msa1251470:CDS 60.0%
GCTTCCGCTTCTGTCTACGG+TGG + chr8_2:47569454-47569473 None:intergenic 60.0%
CGGAAGCAAAGCTAGTGGCG+CGG - chr8_2:47569467-47569486 Msa1251470:intron 60.0%
AAGCAAAGCTAGTGGCGCGG+AGG - chr8_2:47569470-47569489 Msa1251470:intron 60.0%
GGGCCTTGGGAGTAGCAATG+CGG - chr8_2:47569589-47569608 Msa1251470:intron 60.0%
! ATAATCTGGCTCCGTCCCCG+AGG - chr8_2:47569738-47569757 Msa1251470:intron 60.0%
! TAATCTGGCTCCGTCCCCGA+GGG - chr8_2:47569739-47569758 Msa1251470:intron 60.0%
AGCAGCAGTTAGGGCCCTCA+CGG + chr8_2:47570759-47570778 None:intergenic 60.0%
TCAGTCAGGTAGTTGCGGGC+TGG - chr8_2:47571173-47571192 Msa1251470:intron 60.0%
CAGTCAGGTAGTTGCGGGCT+GGG - chr8_2:47571174-47571193 Msa1251470:intron 60.0%
! AGTCAGGTAGTTGCGGGCTG+GGG - chr8_2:47571175-47571194 Msa1251470:intron 60.0%
!! GGCGGGCTTTAGGGAAAGGA+AGG - chr8_2:47571953-47571972 Msa1251470:intron 60.0%
GCCACAATCGTGGTAGTCCG+CGG - chr8_2:47573369-47573388 Msa1251470:CDS 60.0%
ACAATCGTGGTAGTCCGCGG+CGG - chr8_2:47573372-47573391 Msa1251470:CDS 60.0%
! CCGCGCCGCGTCAATTTTTG+GGG + chr8_2:47574238-47574257 None:intergenic 60.0%
CCCCAAAAATTGACGCGGCG+CGG - chr8_2:47574235-47574254 Msa1251470:intron 60.0%
! CCCGCGCCGCGTCAATTTTT+GGG + chr8_2:47574239-47574258 None:intergenic 60.0%
CCCAAAAATTGACGCGGCGC+GGG - chr8_2:47574236-47574255 Msa1251470:intron 60.0%
CCAAAAATTGACGCGGCGCG+GGG - chr8_2:47574237-47574256 Msa1251470:intron 60.0%
GTATAAAGCGGGCGCGATGC+GGG + chr8_2:47574843-47574862 None:intergenic 60.0%
GGTATAAAGCGGGCGCGATG+CGG + chr8_2:47574844-47574863 None:intergenic 60.0%
! CGCGGAGCGTTTGGAGAAAG+CGG + chr8_2:47574887-47574906 None:intergenic 60.0%
GGGACACAGTGGCAGTGATG+AGG - chr8_2:47575155-47575174 Msa1251470:intron 60.0%
! TCGTCGGTGATGGCTGCAAG+AGG - chr8_2:47576294-47576313 Msa1251470:intron 60.0%
! CGTCGGTGATGGCTGCAAGA+GGG - chr8_2:47576295-47576314 Msa1251470:intron 60.0%
! GTCGGTGATGGCTGCAAGAG+GGG - chr8_2:47576296-47576315 Msa1251470:intron 60.0%
TGACCACGGCCCTCCATTCA+GGG + chr8_2:47576613-47576632 None:intergenic 60.0%
TTGACCACGGCCCTCCATTC+AGG + chr8_2:47576614-47576633 None:intergenic 60.0%
ACCTTGTGCGGGGAAGGAGA+GGG + chr8_2:47576894-47576913 None:intergenic 60.0%
! GGGGTGGCGACAACCCCTTT+TGG - chr8_2:47569713-47569732 Msa1251470:intron 65.0%
! GGGAGTGTAGGGGGGAGAGA+AGG - chr8_2:47572452-47572471 Msa1251470:CDS 65.0%
!! AGTGGTGGCGGCCACAATCG+TGG - chr8_2:47573359-47573378 Msa1251470:CDS 65.0%
! GCCGCGGACTACCACGATTG+TGG + chr8_2:47573373-47573392 None:intergenic 65.0%
CAATCGTGGTAGTCCGCGGC+GGG - chr8_2:47573373-47573392 Msa1251470:CDS 65.0%
GGCCCAGAGATCCGGCAAAG+TGG - chr8_2:47573540-47573559 Msa1251470:intron 65.0%
! CCCCGCGCCGCGTCAATTTT+TGG + chr8_2:47574240-47574259 None:intergenic 65.0%
!! GCGCGTAGCGGGCGCTATTT+CGG - chr8_2:47574265-47574284 Msa1251470:intron 65.0%
! CGGGCGCTATTTCGGTGACG+CGG - chr8_2:47574273-47574292 Msa1251470:intron 65.0%
! GCTCTCCAACGCGGAGCGTT+TGG + chr8_2:47574896-47574915 None:intergenic 65.0%
!! TGGCTGCAAGAGGGGCACTG+TGG - chr8_2:47576304-47576323 Msa1251470:intron 65.0%
AGTCCCTGAATGGAGGGCCG+TGG - chr8_2:47576607-47576626 Msa1251470:intron 65.0%
TTGTGCGGGGAAGGAGAGGG+TGG + chr8_2:47576891-47576910 None:intergenic 65.0%
ACCCTCTCCTTCCCCGCACA+AGG - chr8_2:47576890-47576909 Msa1251470:intron 65.0%
GACCTTGTGCGGGGAAGGAG+AGG + chr8_2:47576895-47576914 None:intergenic 65.0%
GCTGCTACACAGACCCGCCG+CGG + chr8_2:47573389-47573408 None:intergenic 70.0%
AATTGACGCGGCGCGGGGTG+TGG - chr8_2:47574242-47574261 Msa1251470:intron 70.0%
ATTGACGCGGCGCGGGGTGT+GGG - chr8_2:47574243-47574262 Msa1251470:intron 70.0%
GCTGAAGCGGGCGCGATTGC+AGG + chr8_2:47574865-47574884 None:intergenic 70.0%
CGCGACGCAGCTCTCCAACG+CGG + chr8_2:47574905-47574924 None:intergenic 70.0%
AGCGGAAATGCGGCGCGGCG+CGG - chr8_2:47574210-47574229 Msa1251470:intron 75.0%
GGCGCGATGCGGGTCAACGC+GGG + chr8_2:47574833-47574852 None:intergenic 75.0%
GGGCGCGATGCGGGTCAACG+CGG + chr8_2:47574834-47574853 None:intergenic 75.0%
! CGCGGGGTGTGGGCGCGTAG+CGG - chr8_2:47574253-47574272 Msa1251470:intron 80.0%
! GCGGGGTGTGGGCGCGTAGC+GGG - chr8_2:47574254-47574273 Msa1251470:intron 80.0%
! AACGCGGCGCGATCGCGGCG+CGG + chr8_2:47574943-47574962 None:intergenic 80.0%
! CGCCGCGATCGCGCCGCGTT+CGG - chr8_2:47574943-47574962 Msa1251470:intron 80.0%
! GGCCGAACGCGGCGCGATCG+CGG + chr8_2:47574948-47574967 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 47568869 47577145 47568869 ID=Msa1251470;Name=Msa1251470
chr8_2 mRNA 47568869 47577145 47568869 ID=Msa1251470-mRNA-1;Parent=Msa1251470;Name=Msa1251470-mRNA-1;_AED=0.18;_eAED=0.18;_QI=88|1|1|1|1|1|8|484|303
chr8_2 exon 47568869 47569484 47568869 ID=Msa1251470-mRNA-1:exon:14387;Parent=Msa1251470-mRNA-1
chr8_2 exon 47569619 47569725 47569619 ID=Msa1251470-mRNA-1:exon:14386;Parent=Msa1251470-mRNA-1
chr8_2 exon 47572352 47572488 47572352 ID=Msa1251470-mRNA-1:exon:14385;Parent=Msa1251470-mRNA-1
chr8_2 exon 47573308 47573444 47573308 ID=Msa1251470-mRNA-1:exon:14384;Parent=Msa1251470-mRNA-1
chr8_2 exon 47573700 47573808 47573700 ID=Msa1251470-mRNA-1:exon:14383;Parent=Msa1251470-mRNA-1
chr8_2 exon 47575228 47575366 47575228 ID=Msa1251470-mRNA-1:exon:14382;Parent=Msa1251470-mRNA-1
chr8_2 exon 47576798 47576903 47576798 ID=Msa1251470-mRNA-1:exon:14381;Parent=Msa1251470-mRNA-1
chr8_2 exon 47577013 47577145 47577013 ID=Msa1251470-mRNA-1:exon:14380;Parent=Msa1251470-mRNA-1
chr8_2 five_prime_UTR 47577058 47577145 47577058 ID=Msa1251470-mRNA-1:five_prime_utr;Parent=Msa1251470-mRNA-1
chr8_2 CDS 47577013 47577057 47577013 ID=Msa1251470-mRNA-1:cds;Parent=Msa1251470-mRNA-1
chr8_2 CDS 47576798 47576903 47576798 ID=Msa1251470-mRNA-1:cds;Parent=Msa1251470-mRNA-1
chr8_2 CDS 47575228 47575366 47575228 ID=Msa1251470-mRNA-1:cds;Parent=Msa1251470-mRNA-1
chr8_2 CDS 47573700 47573808 47573700 ID=Msa1251470-mRNA-1:cds;Parent=Msa1251470-mRNA-1
chr8_2 CDS 47573308 47573444 47573308 ID=Msa1251470-mRNA-1:cds;Parent=Msa1251470-mRNA-1
chr8_2 CDS 47572352 47572488 47572352 ID=Msa1251470-mRNA-1:cds;Parent=Msa1251470-mRNA-1
chr8_2 CDS 47569619 47569725 47569619 ID=Msa1251470-mRNA-1:cds;Parent=Msa1251470-mRNA-1
chr8_2 CDS 47569353 47569484 47569353 ID=Msa1251470-mRNA-1:cds;Parent=Msa1251470-mRNA-1
chr8_2 three_prime_UTR 47568869 47569352 47568869 ID=Msa1251470-mRNA-1:three_prime_utr;Parent=Msa1251470-mRNA-1
Gene Sequence

>Msa1251470

ATGGATTACCGTAACAAAAAGATTCTTGCTCCTATGGTTCGCGTTGGCACTCTTCCACTTAGATTACTAGCTGCTGAATATGGTGCAGATATCACTTACGGTGAAGAAATTGTTGACCACAAAATTATCAAATGCGAACGCCGAATCAACGAACATCTTGGATCCACTGATTTTGTGGAGAAAGGGACGGAAAGTGTCGTGTTTAGAACCTGTGATCAAGAAAAAGATAGAGTTGTGTTTCAAATAGGCACATCTGATGCCGTGAGGGCCCTAACTGCTGCTCAGTTAGTGTGTAATGATGTTGCTGCAATAGATATTAACATGGGATGCCCCAAGGCATTTTCTTTGAGTGGTGGGATGGGTGCTGCTCTGTTGTCCAAACCAGAGCTTATCAGTGATATCTTAACAACATTACGGAGGAATTTGAGCCTACCTGTAACATGTAAGATTCGACTTCTAAAATTACCGCATGATACAGTGGAGCTTGCCAGGCGAATTGAGAAAACTGGTGTTGATGCTCTTGCAGTCCATGGAAGATATGTCTTAGATAGGCCCAGAGATCCGGCAAAGTGGAGTGGAATTGCCGATGTTGTGTCAGCACTATCTATTCCAGTTATAGCAAATGGTGATGTCTTTGAGTATGACGATTTCCAACGCATTAAATCTGCTACAGGTGCTTCGTCGGTGATGGCTGCAAGAGGGGCACTGTGGAATCCTTCAATATTTTCACCTGAAGGCGAAGTTTCTTATGAGGTTACACAAAAAGAATATATTAGGAAGTGCATCTTGTGGGATAATGATATTAGAAGCACCAAGCATACATTAAGGGATATGAAGTCACATTATTCCTCTCTTGAAGTCCCTGAATGGAGGGCCGTGGTCAAATCCGAGACCACAGCAGAGATAGCGTAA

Protein sequence

>Msa1251470

MDYRNKKILAPMVRVGTLPLRLLAAEYGADITYGEEIVDHKIIKCERRINEHLGSTDFVEKGTESVVFRTCDQEKDRVVFQIGTSDAVRALTAAQLVCNDVAAIDINMGCPKAFSLSGGMGAALLSKPELISDILTTLRRNLSLPVTCKIRLLKLPHDTVELARRIEKTGVDALAVHGRYVLDRPRDPAKWSGIADVVSALSIPVIANGDVFEYDDFQRIKSATGASSVMAARGALWNPSIFSPEGEVSYEVTQKEYIRKCILWDNDIRSTKHTLRDMKSHYSSLEVPEWRAVVKSETTAEIA*