AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0223380


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0223380 MtrunA17_Chr2g0328581 74.866 187 17 6 1 174 1 170 2.17e-86 256
Msa0223380 MtrunA17_Chr2g0328591 86.364 110 10 1 161 270 20 124 1.46e-59 185
Msa0223380 MtrunA17_Chr6g0478651 51.316 76 37 0 65 140 54 129 3.83e-16 77.8
Msa0223380 MtrunA17_Chr7g0253281 47.126 87 45 1 77 162 52 138 1.11e-15 75.5
Msa0223380 MtrunA17_Chr7g0242951 54.098 61 28 0 80 140 28 88 1.30e-13 70.5
Msa0223380 MtrunA17_Chr2g0295821 32.867 143 76 3 2 140 39 165 1.86e-13 69.3
Msa0223380 MtrunA17_Chr1g0209551 55.556 63 27 1 80 141 17 79 3.13e-13 68.9
Msa0223380 MtrunA17_Chr3g0123861 50.000 72 34 1 69 140 74 143 4.57e-13 68.6
Msa0223380 MtrunA17_Chr2g0307061 39.189 74 45 0 67 140 98 171 1.01e-12 67.4
Msa0223380 MtrunA17_Chr3g0115361 35.200 125 55 4 41 155 54 162 1.58e-12 65.9
Msa0223380 MtrunA17_Chr5g0414471 44.944 89 43 3 80 167 26 109 2.22e-12 66.6
Msa0223380 MtrunA17_Chr8g0378161 33.333 129 75 5 17 142 6 126 4.50e-12 63.5
Msa0223380 MtrunA17_Chr2g0295831 36.957 92 57 1 50 140 80 171 5.76e-12 63.9
Msa0223380 MtrunA17_Chr2g0333221 51.667 60 29 0 81 140 72 131 7.18e-12 65.1
Msa0223380 MtrunA17_Chr4g0014421 50.000 64 30 1 79 140 128 191 2.48e-11 62.4
Msa0223380 MtrunA17_Chr5g0426951 30.000 170 102 5 81 249 85 238 2.61e-11 63.5
Msa0223380 MtrunA17_Chr4g0050581 40.506 79 42 2 69 142 41 119 2.94e-11 60.8
Msa0223380 MtrunA17_Chr3g0103131 44.186 86 37 2 66 140 38 123 3.24e-11 60.5
Msa0223380 MtrunA17_Chr1g0206121 41.333 75 39 1 81 150 37 111 6.06e-11 61.6
Msa0223380 MtrunA17_Chr3g0087741 45.946 74 34 2 73 140 78 151 9.78e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0223380 AT5G59610.1 68.095 210 59 5 65 270 62 267 4.02e-89 266
Msa0223380 AT5G59610.4 68.095 210 59 5 65 270 62 267 4.02e-89 266
Msa0223380 AT5G59610.3 64.706 221 59 6 65 270 62 278 1.12e-85 257
Msa0223380 AT5G59610.5 64.706 221 59 6 65 270 62 278 1.12e-85 257
Msa0223380 AT5G59610.2 67.857 112 31 3 65 174 62 170 2.52e-43 148
Msa0223380 AT5G18140.1 34.146 123 67 3 52 161 42 163 5.41e-14 71.2
Msa0223380 AT4G13830.2 33.750 160 77 7 19 162 10 156 2.08e-13 67.8
Msa0223380 AT3G17830.1 35.714 140 74 5 1 140 1 124 2.93e-13 69.7
Msa0223380 AT1G80030.2 51.899 79 35 2 64 140 59 136 4.75e-13 68.9
Msa0223380 AT1G80030.3 51.899 79 35 2 64 140 59 136 4.75e-13 68.9
Msa0223380 AT1G80030.1 51.899 79 35 2 64 140 59 136 4.75e-13 68.9
Msa0223380 AT1G80030.4 51.899 79 35 2 64 140 59 136 4.94e-13 68.9
Msa0223380 AT5G05750.1 33.333 117 62 2 69 169 103 219 8.90e-13 67.4
Msa0223380 AT3G08970.1 52.459 61 29 0 80 140 28 88 9.65e-13 68.2
Msa0223380 AT3G08970.2 52.459 61 29 0 80 140 28 88 9.65e-13 68.2
Msa0223380 AT4G13830.1 32.484 157 77 7 19 159 10 153 1.07e-12 64.7
Msa0223380 AT3G57340.1 35.922 103 65 1 39 140 72 174 1.15e-12 67.8
Msa0223380 AT3G57340.2 35.922 103 65 1 39 140 72 174 1.15e-12 67.8
Msa0223380 AT4G13830.3 34.028 144 69 6 19 149 10 140 2.81e-12 64.3
Msa0223380 AT5G49060.2 46.154 65 35 0 76 140 96 160 3.56e-12 66.2
Msa0223380 AT5G49060.1 46.154 65 35 0 76 140 96 160 3.56e-12 66.2
Msa0223380 AT4G39960.1 53.333 60 28 0 81 140 87 146 4.04e-12 66.2
Msa0223380 AT4G39960.2 53.333 60 28 0 81 140 87 146 4.04e-12 66.2
Msa0223380 AT2G22360.1 53.333 60 28 0 81 140 88 147 4.15e-12 66.2
Msa0223380 AT1G59980.2 46.269 67 35 1 76 141 20 86 2.13e-11 63.9
Msa0223380 AT1G59980.1 46.269 67 35 1 76 141 20 86 2.26e-11 63.9
Msa0223380 AT1G28210.3 50.820 61 29 1 81 140 50 110 2.39e-11 63.9
Msa0223380 AT1G68370.1 50.000 70 32 2 80 148 18 85 2.51e-11 63.9
Msa0223380 AT1G28210.2 50.820 61 29 1 81 140 50 110 2.54e-11 63.9
Msa0223380 AT1G28210.1 50.820 61 29 1 81 140 50 110 2.64e-11 63.5
Msa0223380 AT1G24120.1 41.573 89 46 3 80 167 21 104 3.40e-11 63.5

Find 60 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTCATTTATTTATCTTT+TGG 0.191253 2_1:-72927625 Msa0223380:three_prime_UTR
TACATATTTACTCTTCAATT+TGG 0.222474 2_1:+72927580 None:intergenic
TATTACAGGAGACTTCTTTA+AGG 0.240029 2_1:-72928305 Msa0223380:intron
GTGGCTATAGAAATAGAATA+AGG 0.258658 2_1:-72931906 Msa0223380:CDS
TTGAAGAACTCGTTTGGTTT+TGG 0.285091 2_1:+72931986 None:intergenic
AATTTAGTCCTTGAAATTGT+AGG 0.301489 2_1:-72927558 Msa0223380:three_prime_UTR
ATCTGTGAATGAAATCAAAA+AGG 0.320337 2_1:-72931821 Msa0223380:CDS
ATAAATGAGAGGCAATAAAT+TGG 0.338491 2_1:+72927636 None:intergenic
GAGTCTCCATATGAAGTTCT+TGG 0.367430 2_1:-72931859 Msa0223380:CDS
CAACTTGTTGATTCCAACTC+TGG 0.377760 2_1:+72930157 None:intergenic
TAGAAATTGAAGAACTCGTT+TGG 0.383805 2_1:+72931980 None:intergenic
TTACAAGAAGGAAGAAGAAA+AGG 0.384915 2_1:+72932072 None:intergenic
GATACAGTCCTACAATTTCA+AGG 0.388428 2_1:+72927550 None:intergenic
TCTATGTTGTTGTCGAGGTT+CGG 0.404059 2_1:+72932160 None:intergenic
ACAATGATAGCTAGTTGAAA+TGG 0.410290 2_1:-72927664 Msa0223380:three_prime_UTR
GACAAACCAAGAACTTCATA+TGG 0.429946 2_1:+72931853 None:intergenic
TCACCTTGAGTGCTGTTGCT+TGG 0.430562 2_1:+72927778 None:intergenic
ATTACCTCTTTATTAACATC+AGG 0.432548 2_1:+72931769 None:intergenic
TTCAAGAAGAGTTCAAGAAC+TGG 0.433984 2_1:-72928279 Msa0223380:CDS
CTATATCTGATTCTGAAACT+AGG 0.435657 2_1:+72931955 None:intergenic
AAGGAAAGCCGAAGAGCCTA+TGG 0.442336 2_1:-72928237 Msa0223380:CDS
TGGCTATAGAAATAGAATAA+GGG 0.455128 2_1:-72931905 Msa0223380:CDS
ATGAAGATGGTTGAAGAAAT+CGG 0.458404 2_1:+72932019 None:intergenic
GGAAATAGGCGAAGAATTTG+TGG 0.458728 2_1:-72927887 Msa0223380:CDS
TACAAGAAGGAAGAAGAAAA+GGG 0.461627 2_1:+72932073 None:intergenic
AACTCCTCCCATAGGCTCTT+CGG 0.475580 2_1:+72928229 None:intergenic
TGATTCAAATGAAAGTCCTC+AGG 0.489157 2_1:-72927836 Msa0223380:CDS
CACTCAAGGTGAAGCTAGCA+AGG 0.491535 2_1:-72927767 Msa0223380:CDS
GAGCCTATGGGAGGAGTTGT+CGG 0.510611 2_1:-72928224 Msa0223380:intron
TGTTGTTGTCGAGGTTCGGT+TGG 0.510626 2_1:+72932164 None:intergenic
TCATCCTGATGTTAATAAAG+AGG 0.514132 2_1:-72931773 Msa0223380:intron
GAGTGGCTTCTATTTCATCA+AGG 0.517887 2_1:+72927722 None:intergenic
TTCAGAATCATACTTTCTGC+GGG 0.518411 2_1:+72930209 None:intergenic
ATTTCATTCACAGATGCAGA+TGG 0.530663 2_1:+72931829 None:intergenic
CTTCTCAAAGAAGCCAGAGT+TGG 0.533826 2_1:-72930170 Msa0223380:CDS
TTTCAGAATCATACTTTCTG+CGG 0.543741 2_1:+72930208 None:intergenic
ACACCAAGCAACAGCACTCA+AGG 0.557671 2_1:-72927781 Msa0223380:CDS
GAAAGTAACATGTTACAAGA+AGG 0.560989 2_1:+72932060 None:intergenic
CAGCATGAGAACAAAGGAAG+AGG 0.565694 2_1:-72931928 Msa0223380:CDS
AAATAGAAGCCACTCTAGCT+CGG 0.585461 2_1:-72927714 Msa0223380:CDS
GAAGCTAGTGCGGCTGCACA+AGG 0.586139 2_1:-72928256 Msa0223380:CDS
TAAGGGTAGTTGTAAGAGCA+AGG 0.586280 2_1:-72931888 Msa0223380:CDS
TTTCGTCTATGTTGTTGTCG+AGG 0.586339 2_1:+72932155 None:intergenic
AGAAAGCAGCATGAGAACAA+AGG 0.590712 2_1:-72931934 Msa0223380:CDS
CAAGAACTGGGAAGCTAGTG+CGG 0.594019 2_1:-72928266 Msa0223380:CDS
TCAAGAAGAGTTCAAGAACT+GGG 0.606488 2_1:-72928278 Msa0223380:CDS
CAATATTGAGTTCTTTCTCG+AGG 0.608230 2_1:+72927860 None:intergenic
CCAAAAGATAAATAAATGAG+AGG 0.611942 2_1:+72927625 None:intergenic
TCACCGACAACTCCTCCCAT+AGG 0.620299 2_1:+72928221 None:intergenic
CATGAGAACAAAGGAAGAGG+TGG 0.621705 2_1:-72931925 Msa0223380:CDS
AAGTATGATTCTGAAAATCG+TGG 0.629512 2_1:-72930201 Msa0223380:CDS
CAAGGGAAACACAAGCGTTG+AGG 0.630371 2_1:-72927749 Msa0223380:CDS
AGGAAAGCCGAAGAGCCTAT+GGG 0.632474 2_1:-72928236 Msa0223380:CDS
GATTCAAATGAAAGTCCTCA+GGG 0.638771 2_1:-72927835 Msa0223380:CDS
ATTCTCACAGGACAATGCAC+AGG 0.650566 2_1:-72930283 Msa0223380:intron
TTAGATGAATTTCCTCCCTG+AGG 0.666308 2_1:+72927820 None:intergenic
ACTCAAGGTGAAGCTAGCAA+GGG 0.673091 2_1:-72927766 Msa0223380:CDS
AAAGCCGAAGAGCCTATGGG+AGG 0.695988 2_1:-72928233 Msa0223380:CDS
TCAAATGAAAGTCCTCAGGG+AGG 0.744401 2_1:-72927832 Msa0223380:CDS
GTAGTTGTAAGAGCAAGGCG+TGG 0.746025 2_1:-72931883 Msa0223380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAAATTTTGATTTTGTTT+TGG - chr2_1:72930894-72930913 Msa0223380:intron 10.0%
!!! AATCTTTTAAGATTGAAATT+TGG + chr2_1:72927495-72927514 None:intergenic 15.0%
!! TGCTAATAATATCATAATAA+TGG + chr2_1:72928158-72928177 None:intergenic 15.0%
!! TTAGAAAAATAAAACAACAT+AGG + chr2_1:72928995-72929014 None:intergenic 15.0%
!!! ATGTTGTTTTATTTTTCTAA+AGG - chr2_1:72928995-72929014 Msa0223380:intron 15.0%
!!! ATATCTTAATGGATTTATTA+TGG + chr2_1:72929869-72929888 None:intergenic 15.0%
!! AAAAAAAATAGATCAGTAAT+GGG + chr2_1:72930559-72930578 None:intergenic 15.0%
!! AAAAAAAAATAGATCAGTAA+TGG + chr2_1:72930560-72930579 None:intergenic 15.0%
!!! ATGTGATTTTAAAAACAAAT+AGG + chr2_1:72931641-72931660 None:intergenic 15.0%
!!! TTTTTGAAATTTTAACTTTC+AGG - chr2_1:72931794-72931813 Msa0223380:CDS 15.0%
!!! CATTTTGAAAAATTGATATA+TGG + chr2_1:72932186-72932205 None:intergenic 15.0%
!! CTTAGTAGTTTATTATTATG+TGG - chr2_1:72927986-72928005 Msa0223380:intron 20.0%
!! TTTGAAGATAAAAGATTTCA+TGG - chr2_1:72928224-72928243 Msa0223380:intron 20.0%
!!! TTTTAGAAAAACAAGGATAA+AGG - chr2_1:72929211-72929230 Msa0223380:intron 20.0%
!! ATAATGATGTAGTCATATAA+CGG - chr2_1:72929279-72929298 Msa0223380:intron 20.0%
!! ATATTATTAGTAGGATGTAA+TGG - chr2_1:72929766-72929785 Msa0223380:intron 20.0%
!!! TACTCTTTTCTATGTTAATT+TGG - chr2_1:72929796-72929815 Msa0223380:intron 20.0%
!! GAGTGATAAAAATATCTTAA+TGG + chr2_1:72929880-72929899 None:intergenic 20.0%
!! TAATAGTAAACTTCAGTTTA+AGG + chr2_1:72929905-72929924 None:intergenic 20.0%
!!! TTCTAAGGTAATATAGATAA+AGG - chr2_1:72930480-72930499 Msa0223380:intron 20.0%
!! AATATAGATAAAGGATAATC+TGG - chr2_1:72930489-72930508 Msa0223380:intron 20.0%
!! AAAATAGATTTGTAACTTTG+AGG + chr2_1:72930733-72930752 None:intergenic 20.0%
!! AAGTTACTAATTTGATCAAA+TGG + chr2_1:72931095-72931114 None:intergenic 20.0%
!! TAAAATTTGTAATGAAATGC+AGG + chr2_1:72931257-72931276 None:intergenic 20.0%
!!! CATTTCATTACAAATTTTAC+TGG - chr2_1:72931258-72931277 Msa0223380:intron 20.0%
!!! GTTTTATATTTCATTTCATG+TGG - chr2_1:72931351-72931370 Msa0223380:intron 20.0%
!!! TAACATTTTTATTTGTGTGT+TGG - chr2_1:72931514-72931533 Msa0223380:intron 20.0%
!!! AAAACTTTTTAAATTGACAG+TGG - chr2_1:72931691-72931710 Msa0223380:intron 20.0%
!!! AATTTTAACTTTCAGGAAAT+AGG - chr2_1:72931801-72931820 Msa0223380:CDS 20.0%
!! TACATATTTACTCTTCAATT+TGG + chr2_1:72932125-72932144 None:intergenic 20.0%
!!! GATTTTTTGATTAACATGCA+TGG - chr2_1:72927597-72927616 Msa0223380:three_prime_UTR 25.0%
! TGGCTATAGAAATAGAATAA+GGG - chr2_1:72927797-72927816 Msa0223380:CDS 25.0%
! ATCTGTGAATGAAATCAAAA+AGG - chr2_1:72927881-72927900 Msa0223380:CDS 25.0%
! ATGAAATCAAAAAGGCTTAT+AGG - chr2_1:72927889-72927908 Msa0223380:CDS 25.0%
! ATTACCTCTTTATTAACATC+AGG + chr2_1:72927936-72927955 None:intergenic 25.0%
!! TTATGTGGAAGTTTTTGTAT+AGG - chr2_1:72928001-72928020 Msa0223380:intron 25.0%
! CTACAGAAAATGTTAAATAG+TGG - chr2_1:72928306-72928325 Msa0223380:intron 25.0%
! TTGTGAAATAACAACTATAG+TGG - chr2_1:72928377-72928396 Msa0223380:intron 25.0%
! TGTGAAATAACAACTATAGT+GGG - chr2_1:72928378-72928397 Msa0223380:intron 25.0%
!! TATTTTATGCTCCAATAAGT+TGG - chr2_1:72928833-72928852 Msa0223380:intron 25.0%
!! CAATAAGTTGGAAAAAGTTT+CGG - chr2_1:72928845-72928864 Msa0223380:intron 25.0%
! TGACATTCATACTATAATCA+TGG + chr2_1:72928876-72928895 None:intergenic 25.0%
!!! TATTTTTCTAAAGGAAATCC+CGG - chr2_1:72929004-72929023 Msa0223380:intron 25.0%
!!! GTATGGATTTTAGAAAAACA+AGG - chr2_1:72929204-72929223 Msa0223380:intron 25.0%
!! AATTGTCAGATACAATCTTT+TGG + chr2_1:72929331-72929350 None:intergenic 25.0%
!!! ATTTTAAAGTGTATTCTCAC+AGG - chr2_1:72929407-72929426 Msa0223380:intron 25.0%
!!! CAAGTTGAAGAAGAATTTTA+TGG - chr2_1:72929561-72929580 Msa0223380:intron 25.0%
!! GAAGAAGAATTTTATGGATT+AGG - chr2_1:72929567-72929586 Msa0223380:intron 25.0%
! ATCCTACTAATAATATATGC+CGG + chr2_1:72929762-72929781 None:intergenic 25.0%
! ATTATGGCTATATCATTAGT+TGG + chr2_1:72929853-72929872 None:intergenic 25.0%
! CAATAGTTTCCTGTAAAAAT+GGG + chr2_1:72930112-72930131 None:intergenic 25.0%
!! ATACTTTTCTTGAGTATTTG+GGG + chr2_1:72930209-72930228 None:intergenic 25.0%
!! GATACTTTTCTTGAGTATTT+GGG + chr2_1:72930210-72930229 None:intergenic 25.0%
!! TGATACTTTTCTTGAGTATT+TGG + chr2_1:72930211-72930230 None:intergenic 25.0%
!! ATGTAGTAGTATTTGTCTTT+TGG - chr2_1:72930343-72930362 Msa0223380:intron 25.0%
!! TTTGTCTTTTGGATTAAAAG+AGG - chr2_1:72930354-72930373 Msa0223380:intron 25.0%
!! TTGTCTTTTGGATTAAAAGA+GGG - chr2_1:72930355-72930374 Msa0223380:intron 25.0%
! ACTAATAGTACTAGTACTTA+AGG + chr2_1:72930412-72930431 None:intergenic 25.0%
!! ATATCTTTGTGGATTTGTTT+AGG + chr2_1:72930461-72930480 None:intergenic 25.0%
! AAATCCACAAAGATATTCTA+AGG - chr2_1:72930465-72930484 Msa0223380:intron 25.0%
! ATTACCTTAGAATATCTTTG+TGG + chr2_1:72930472-72930491 None:intergenic 25.0%
!!! CATCTCTTTTGATTAATGAA+AGG + chr2_1:72930605-72930624 None:intergenic 25.0%
! ATCAAAAGAGATGAAATACA+AGG - chr2_1:72930612-72930631 Msa0223380:intron 25.0%
!!! ACTTTGAGGTTAAGTTTATT+CGG + chr2_1:72930719-72930738 None:intergenic 25.0%
!!! TTTTGTTTTGGTTTATTGTG+TGG - chr2_1:72930906-72930925 Msa0223380:intron 25.0%
!! TGGATTTAATTTAACGAAGA+TGG - chr2_1:72930926-72930945 Msa0223380:intron 25.0%
! TTAATTTAACGAAGATGGTA+CGG - chr2_1:72930931-72930950 Msa0223380:intron 25.0%
! TAAAGGAGAACATAAATAGA+GGG + chr2_1:72930986-72931005 None:intergenic 25.0%
! ATTAGTATTAGAAGAGTTCA+AGG + chr2_1:72931011-72931030 None:intergenic 25.0%
! AGAGATGTTCAAATAACAAT+AGG - chr2_1:72931178-72931197 Msa0223380:intron 25.0%
!!! TCTGATGATTTTGTTATTAC+AGG - chr2_1:72931383-72931402 Msa0223380:intron 25.0%
! ACACAAATAAAAATGTTAGC+GGG + chr2_1:72931512-72931531 None:intergenic 25.0%
! CACACAAATAAAAATGTTAG+CGG + chr2_1:72931513-72931532 None:intergenic 25.0%
! AAGGATTCAATTATATACAC+TGG - chr2_1:72931546-72931565 Msa0223380:intron 25.0%
! ATAAATGAGAGGCAATAAAT+TGG + chr2_1:72932069-72932088 None:intergenic 25.0%
! CCAAAAGATAAATAAATGAG+AGG + chr2_1:72932080-72932099 None:intergenic 25.0%
!! CCTCTCATTTATTTATCTTT+TGG - chr2_1:72932077-72932096 Msa0223380:CDS 25.0%
!! CTCATTTATTTATCTTTTGG+TGG - chr2_1:72932080-72932099 Msa0223380:CDS 25.0%
! AATTTAGTCCTTGAAATTGT+AGG - chr2_1:72932144-72932163 Msa0223380:five_prime_UTR 25.0%
TACAAGAAGGAAGAAGAAAA+GGG + chr2_1:72927632-72927651 None:intergenic 30.0%
TTACAAGAAGGAAGAAGAAA+AGG + chr2_1:72927633-72927652 None:intergenic 30.0%
GAAAGTAACATGTTACAAGA+AGG + chr2_1:72927645-72927664 None:intergenic 30.0%
ATGAAGATGGTTGAAGAAAT+CGG + chr2_1:72927686-72927705 None:intergenic 30.0%
TAGAAATTGAAGAACTCGTT+TGG + chr2_1:72927725-72927744 None:intergenic 30.0%
!! CTATATCTGATTCTGAAACT+AGG + chr2_1:72927750-72927769 None:intergenic 30.0%
GTGGCTATAGAAATAGAATA+AGG - chr2_1:72927796-72927815 Msa0223380:CDS 30.0%
TCATCCTGATGTTAATAAAG+AGG - chr2_1:72927929-72927948 Msa0223380:intron 30.0%
! TGCTATGTTCAACACTTTTA+TGG - chr2_1:72927956-72927975 Msa0223380:intron 30.0%
! TGGAAGTTTTTGTATAGGTT+TGG - chr2_1:72928006-72928025 Msa0223380:intron 30.0%
CATAGAACACAACAAAGAAT+TGG + chr2_1:72928086-72928105 None:intergenic 30.0%
TGCACTATTGTTTGTGATTT+AGG - chr2_1:72928106-72928125 Msa0223380:intron 30.0%
GCACTATTGTTTGTGATTTA+GGG - chr2_1:72928107-72928126 Msa0223380:intron 30.0%
CACTATTGTTTGTGATTTAG+GGG - chr2_1:72928108-72928127 Msa0223380:intron 30.0%
!!! TAGCAGTTTTGAATGATATG+TGG - chr2_1:72928173-72928192 Msa0223380:intron 30.0%
TTCATGGTTGCAAACTTTAT+TGG - chr2_1:72928240-72928259 Msa0223380:CDS 30.0%
TCAATATTCACAGCACAATT+TGG + chr2_1:72928281-72928300 None:intergenic 30.0%
AATTGTTAAGTGTCCAACAT+CGG - chr2_1:72928481-72928500 Msa0223380:intron 30.0%
TCTGACAATGTGTTTATAAG+TGG - chr2_1:72928515-72928534 Msa0223380:intron 30.0%
CTGACAATGTGTTTATAAGT+GGG - chr2_1:72928516-72928535 Msa0223380:intron 30.0%
TGACAATGTGTTTATAAGTG+GGG - chr2_1:72928517-72928536 Msa0223380:intron 30.0%
!! AATTCACAAACCGATTTTGT+GGG - chr2_1:72928549-72928568 Msa0223380:intron 30.0%
TATTCTTAGAAATCGTGGTT+GGG + chr2_1:72928586-72928605 None:intergenic 30.0%
TTATTCTTAGAAATCGTGGT+TGG + chr2_1:72928587-72928606 None:intergenic 30.0%
! ACCACGATTTCTAAGAATAA+TGG - chr2_1:72928587-72928606 Msa0223380:intron 30.0%
TCCATTATTCTTAGAAATCG+TGG + chr2_1:72928591-72928610 None:intergenic 30.0%
AACAATGTGCTTTACTAACA+AGG + chr2_1:72928805-72928824 None:intergenic 30.0%
!! CGAAACTTTTTCCAACTTAT+TGG + chr2_1:72928847-72928866 None:intergenic 30.0%
TGTTTATCATCTTCCAATCT+TGG - chr2_1:72928964-72928983 Msa0223380:intron 30.0%
AACATAGGAAAATCCAAGAT+TGG + chr2_1:72928980-72928999 None:intergenic 30.0%
!! ATTTTTCTAAAGGAAATCCC+GGG - chr2_1:72929005-72929024 Msa0223380:intron 30.0%
!! AATTTTTGTTTGTCCATCAG+CGG + chr2_1:72929131-72929150 None:intergenic 30.0%
TTTCAGAATCATACTTTCTG+CGG + chr2_1:72929497-72929516 None:intergenic 30.0%
! AAGTATGATTCTGAAAATCG+TGG - chr2_1:72929501-72929520 Msa0223380:intron 30.0%
!! TACTTATTTGCAGTCTTGTT+TGG - chr2_1:72929600-72929619 Msa0223380:intron 30.0%
AATTACAGCCTTAGGATAAT+AGG - chr2_1:72929691-72929710 Msa0223380:intron 30.0%
AGGATTAGGGAAAAAGAAAA+AGG - chr2_1:72929711-72929730 Msa0223380:intron 30.0%
AACCGGCATATATTATTAGT+AGG - chr2_1:72929757-72929776 Msa0223380:intron 30.0%
!! TTGAAGGTTTTGTGATTTGA+GGG + chr2_1:72930008-72930027 None:intergenic 30.0%
!! ATTGAAGGTTTTGTGATTTG+AGG + chr2_1:72930009-72930028 None:intergenic 30.0%
CTATCATCTTAAGTTTCTGA+TGG + chr2_1:72930054-72930073 None:intergenic 30.0%
GCAATAGTTTCCTGTAAAAA+TGG + chr2_1:72930113-72930132 None:intergenic 30.0%
!! TCAAGAAAAGTATCAAACAC+TGG - chr2_1:72930216-72930235 Msa0223380:CDS 30.0%
AGTTTATTACGCATGACTTA+AGG + chr2_1:72930320-72930339 None:intergenic 30.0%
ATCATATTTCAGTCATGCTT+CGG + chr2_1:72930381-72930400 None:intergenic 30.0%
TTTCCTAGATCTTGTTAAGA+TGG + chr2_1:72930528-72930547 None:intergenic 30.0%
AAAAGAGATGAAATACAAGG+AGG - chr2_1:72930615-72930634 Msa0223380:intron 30.0%
AATCTCTAACAACAACCAAA+TGG - chr2_1:72930785-72930804 Msa0223380:intron 30.0%
CTAAAGGAGAACATAAATAG+AGG + chr2_1:72930987-72931006 None:intergenic 30.0%
TACTAATTTGATCAAATGGC+AGG + chr2_1:72931091-72931110 None:intergenic 30.0%
TCCCATATAAATCTATCAAC+CGG - chr2_1:72931297-72931316 Msa0223380:intron 30.0%
TATTACAGGAGACTTCTTTA+AGG - chr2_1:72931397-72931416 Msa0223380:intron 30.0%
ACAATGATAGCTAGTTGAAA+TGG - chr2_1:72932038-72932057 Msa0223380:CDS 30.0%
!!! AACTCGTTTGGTTTTGGTTT+TGG + chr2_1:72927713-72927732 None:intergenic 35.0%
!! TTGAAGAACTCGTTTGGTTT+TGG + chr2_1:72927719-72927738 None:intergenic 35.0%
GACAAACCAAGAACTTCATA+TGG + chr2_1:72927852-72927871 None:intergenic 35.0%
ATTTCATTCACAGATGCAGA+TGG + chr2_1:72927876-72927895 None:intergenic 35.0%
ATTGTGCTGTGAATATTGAC+TGG - chr2_1:72928282-72928301 Msa0223380:CDS 35.0%
GACAATGTGTTTATAAGTGG+GGG - chr2_1:72928518-72928537 Msa0223380:intron 35.0%
!! CAATTCACAAACCGATTTTG+TGG - chr2_1:72928548-72928567 Msa0223380:intron 35.0%
!! ATTCACAAACCGATTTTGTG+GGG - chr2_1:72928550-72928569 Msa0223380:intron 35.0%
CTAGAACCATCTTAAATGTG+TGG - chr2_1:72928762-72928781 Msa0223380:intron 35.0%
ACAAGGAGACTTAAAAAGTC+AGG + chr2_1:72928788-72928807 None:intergenic 35.0%
AAATAACAACGTGAGAAGAC+TGG - chr2_1:72928903-72928922 Msa0223380:intron 35.0%
AATAACAACGTGAGAAGACT+GGG - chr2_1:72928904-72928923 Msa0223380:intron 35.0%
! GTCATATAACGGCTCTATTT+TGG - chr2_1:72929290-72929309 Msa0223380:intron 35.0%
! TCAGATACAATCTTTTGGCA+CGG + chr2_1:72929326-72929345 None:intergenic 35.0%
! ATGCACAGGAGAAATTTTTG+AGG - chr2_1:72929433-72929452 Msa0223380:intron 35.0%
TTCAGAATCATACTTTCTGC+GGG + chr2_1:72929496-72929515 None:intergenic 35.0%
CTAAGGCTGTAATTCTGTAA+CGG + chr2_1:72929685-72929704 None:intergenic 35.0%
AGCCTTAGGATAATAGGATT+AGG - chr2_1:72929697-72929716 Msa0223380:intron 35.0%
GCCTTAGGATAATAGGATTA+GGG - chr2_1:72929698-72929717 Msa0223380:intron 35.0%
TCCCTAATCCTATTATCCTA+AGG + chr2_1:72929702-72929721 None:intergenic 35.0%
GGAAAAAGAAAAAGGCAGAA+AGG - chr2_1:72929719-72929738 Msa0223380:intron 35.0%
AAAAGAAAAAGGCAGAAAGG+TGG - chr2_1:72929722-72929741 Msa0223380:intron 35.0%
! GCTATATCATTAGTTGGCTT+GGG + chr2_1:72929847-72929866 None:intergenic 35.0%
CTCATCTAGCCAAATAACTT+AGG - chr2_1:72929965-72929984 Msa0223380:intron 35.0%
TGCTAGTTGCCTAAGTTATT+TGG + chr2_1:72929977-72929996 None:intergenic 35.0%
!! TGAAGGTTTTGTGATTTGAG+GGG + chr2_1:72930007-72930026 None:intergenic 35.0%
CGAGTTATGTTCAGAATTGA+AGG + chr2_1:72930024-72930043 None:intergenic 35.0%
TCATCTTAAGTTTCTGATGG+AGG + chr2_1:72930051-72930070 None:intergenic 35.0%
!! AAACTGCAACCCATTTTTAC+AGG - chr2_1:72930100-72930119 Msa0223380:intron 35.0%
CTAATGTGCTAAGTTTCTCT+TGG + chr2_1:72930135-72930154 None:intergenic 35.0%
! TTTTCTTGAGTATTTGGGGA+TGG + chr2_1:72930205-72930224 None:intergenic 35.0%
CTTCCATCTTAACAAGATCT+AGG - chr2_1:72930522-72930541 Msa0223380:intron 35.0%
AACAAGATCTAGGAAACGAT+TGG - chr2_1:72930532-72930551 Msa0223380:intron 35.0%
GAGGAACAAAATCAAAGACT+CGG - chr2_1:72930634-72930653 Msa0223380:intron 35.0%
AGCTCATAATCTAGCTATAG+CGG + chr2_1:72930679-72930698 None:intergenic 35.0%
TTGAGGTTAAGTTTATTCGG+AGG + chr2_1:72930716-72930735 None:intergenic 35.0%
AACTGCACCAAATACATGAA+TGG + chr2_1:72930855-72930874 None:intergenic 35.0%
ACATAAATAGAGGGTGATTG+AGG + chr2_1:72930977-72930996 None:intergenic 35.0%
TAGAAGAGTTCAAGGACTAA+AGG + chr2_1:72931003-72931022 None:intergenic 35.0%
ATAGGTAGCTATATACTCTC+TGG - chr2_1:72931196-72931215 Msa0223380:intron 35.0%
!! CCCGGTTGATAGATTTATAT+GGG + chr2_1:72931301-72931320 None:intergenic 35.0%
CCCATATAAATCTATCAACC+GGG - chr2_1:72931298-72931317 Msa0223380:intron 35.0%
!! TCCCGGTTGATAGATTTATA+TGG + chr2_1:72931302-72931321 None:intergenic 35.0%
TTCAAGAAGAGTTCAAGAAC+TGG - chr2_1:72931423-72931442 Msa0223380:intron 35.0%
TCAAGAAGAGTTCAAGAACT+GGG - chr2_1:72931424-72931443 Msa0223380:intron 35.0%
CAAATAAAAATGTTAGCGGG+AGG + chr2_1:72931509-72931528 None:intergenic 35.0%
TGTCAATCAATCGTGATCAT+CGG - chr2_1:72931590-72931609 Msa0223380:intron 35.0%
CAATATTGAGTTCTTTCTCG+AGG + chr2_1:72931845-72931864 None:intergenic 35.0%
TGATTCAAATGAAAGTCCTC+AGG - chr2_1:72931866-72931885 Msa0223380:CDS 35.0%
GATTCAAATGAAAGTCCTCA+GGG - chr2_1:72931867-72931886 Msa0223380:CDS 35.0%
GATACAGTCCTACAATTTCA+AGG + chr2_1:72932155-72932174 None:intergenic 35.0%
TCTATGTTGTTGTCGAGGTT+CGG + chr2_1:72927545-72927564 None:intergenic 40.0%
TTTCGTCTATGTTGTTGTCG+AGG + chr2_1:72927550-72927569 None:intergenic 40.0%
!!! TGGTTTTGGAAGCATGAAGA+TGG + chr2_1:72927699-72927718 None:intergenic 40.0%
AGAAAGCAGCATGAGAACAA+AGG - chr2_1:72927768-72927787 Msa0223380:CDS 40.0%
TAAGGGTAGTTGTAAGAGCA+AGG - chr2_1:72927814-72927833 Msa0223380:CDS 40.0%
GAGTCTCCATATGAAGTTCT+TGG - chr2_1:72927843-72927862 Msa0223380:CDS 40.0%
CAAATTCCGGTACACGATAA+AGG + chr2_1:72928404-72928423 None:intergenic 40.0%
! TATTTTCCACAATCCGCAGT+TGG - chr2_1:72928434-72928453 Msa0223380:intron 40.0%
CTAACACAACCCCACAAAAT+CGG + chr2_1:72928562-72928581 None:intergenic 40.0%
TCCACTTTCACATTGTCACA+AGG - chr2_1:72928665-72928684 Msa0223380:intron 40.0%
ACCTTGTGACAATGTGAAAG+TGG + chr2_1:72928669-72928688 None:intergenic 40.0%
CATTGTCACAAGGTTTGTCA+TGG - chr2_1:72928675-72928694 Msa0223380:intron 40.0%
CTACAAGTGTACATACATGC+AGG + chr2_1:72928942-72928961 None:intergenic 40.0%
TTGATCACCATCGTGATAAC+TGG - chr2_1:72929168-72929187 Msa0223380:intron 40.0%
TTGAAAGCCAGTTATCACGA+TGG + chr2_1:72929178-72929197 None:intergenic 40.0%
! CTGGCTTTCAATCATGAGTA+TGG - chr2_1:72929187-72929206 Msa0223380:intron 40.0%
!! CAACTTGTTGATTCCAACTC+TGG + chr2_1:72929548-72929567 None:intergenic 40.0%
CGTTACAGAATTACAGCCTT+AGG - chr2_1:72929683-72929702 Msa0223380:intron 40.0%
GGCTATATCATTAGTTGGCT+TGG + chr2_1:72929848-72929867 None:intergenic 40.0%
CTTAAGTTTCTGATGGAGGT+CGG + chr2_1:72930047-72930066 None:intergenic 40.0%
TTCTCTTCTGTCTGCTTGTT+TGG + chr2_1:72930079-72930098 None:intergenic 40.0%
ATCCTGAACCATTCAAACAC+AGG - chr2_1:72930158-72930177 Msa0223380:CDS 40.0%
TTCCTGTGTTTGAATGGTTC+AGG + chr2_1:72930163-72930182 None:intergenic 40.0%
TGAACCATTCAAACACAGGA+AGG - chr2_1:72930162-72930181 Msa0223380:CDS 40.0%
GTGAGTGATCATCACAAGTT+TGG + chr2_1:72930254-72930273 None:intergenic 40.0%
TACGCATGACTTAAGGTTCA+GGG + chr2_1:72930313-72930332 None:intergenic 40.0%
TTACGCATGACTTAAGGTTC+AGG + chr2_1:72930314-72930333 None:intergenic 40.0%
AGGTAATTGTTCTTGTCGCT+AGG + chr2_1:72930441-72930460 None:intergenic 40.0%
! CCTTACACTGCATTTTGCTA+GGG - chr2_1:72930759-72930778 Msa0223380:intron 40.0%
! CTTACACTGCATTTTGCTAG+GGG - chr2_1:72930760-72930779 Msa0223380:intron 40.0%
ATACCTCGCTGAAAACCATT+TGG + chr2_1:72930803-72930822 None:intergenic 40.0%
CAGCAGACCATTCATGTATT+TGG - chr2_1:72930845-72930864 Msa0223380:intron 40.0%
TGGTGCAGTTAAAAACTGTC+AGG - chr2_1:72930865-72930884 Msa0223380:intron 40.0%
ATTTGATCAAATGGCAGGAC+AGG + chr2_1:72931086-72931105 None:intergenic 40.0%
TGAAATGCAGGCTAAACTCA+TGG + chr2_1:72931245-72931264 None:intergenic 40.0%
AAATCTATCAACCGGGACAA+AGG - chr2_1:72931305-72931324 Msa0223380:intron 40.0%
AATCTATCAACCGGGACAAA+GGG - chr2_1:72931306-72931325 Msa0223380:intron 40.0%
TGTGTGTTGGAGTTCAGTTA+AGG - chr2_1:72931527-72931546 Msa0223380:intron 40.0%
! TGCATACTGAAGGCTTTTCT+TGG + chr2_1:72931748-72931767 None:intergenic 40.0%
AAAGCCTTCAGTATGCAACA+AGG - chr2_1:72931751-72931770 Msa0223380:intron 40.0%
AAAATGATGAGTCCACGTGT+AGG + chr2_1:72931778-72931797 None:intergenic 40.0%
GGAAATAGGCGAAGAATTTG+TGG - chr2_1:72931815-72931834 Msa0223380:CDS 40.0%
TTAGATGAATTTCCTCCCTG+AGG + chr2_1:72931885-72931904 None:intergenic 40.0%
GAGTGGCTTCTATTTCATCA+AGG + chr2_1:72931983-72932002 None:intergenic 40.0%
AAATAGAAGCCACTCTAGCT+CGG - chr2_1:72931988-72932007 Msa0223380:CDS 40.0%
!!! CTTTTTTAACCGAGCTAGAG+TGG + chr2_1:72932000-72932019 None:intergenic 40.0%
! CACTCTAGCTCGGTTAAAAA+AGG - chr2_1:72931998-72932017 Msa0223380:CDS 40.0%
GCTCGGTTAAAAAAGGAGTT+AGG - chr2_1:72932005-72932024 Msa0223380:CDS 40.0%
CAGCATGAGAACAAAGGAAG+AGG - chr2_1:72927774-72927793 Msa0223380:CDS 45.0%
CATGAGAACAAAGGAAGAGG+TGG - chr2_1:72927777-72927796 Msa0223380:CDS 45.0%
!! ATAGCGGGCTGTTCAAATTC+CGG + chr2_1:72928417-72928436 None:intergenic 45.0%
! TGCGGATTGTGGAAAATAGC+GGG + chr2_1:72928432-72928451 None:intergenic 45.0%
! CTGCGGATTGTGGAAAATAG+CGG + chr2_1:72928433-72928452 None:intergenic 45.0%
ACAATCAGTGTTGCCAACTG+CGG + chr2_1:72928450-72928469 None:intergenic 45.0%
GTCCAACATCGGATAAGTGA+TGG - chr2_1:72928492-72928511 Msa0223380:intron 45.0%
GACCATCACTTATCCGATGT+TGG + chr2_1:72928497-72928516 None:intergenic 45.0%
! CGATTTTGTGGGGTTGTGTT+AGG - chr2_1:72928560-72928579 Msa0223380:intron 45.0%
GTCAGGCCACACATTTAAGA+TGG + chr2_1:72928771-72928790 None:intergenic 45.0%
ATTCTCACAGGACAATGCAC+AGG - chr2_1:72929419-72929438 Msa0223380:intron 45.0%
CTTCTCAAAGAAGCCAGAGT+TGG - chr2_1:72929532-72929551 Msa0223380:intron 45.0%
GGTGGTGCAAAGTGATAAAC+CGG - chr2_1:72929740-72929759 Msa0223380:intron 45.0%
CTCTCCTTCCTGTGTTTGAA+TGG + chr2_1:72930169-72930188 None:intergenic 45.0%
AGGAAGGAGAGACACATATC+TGG - chr2_1:72930178-72930197 Msa0223380:CDS 45.0%
! GATCATCACAAGTTTGGAGC+AGG + chr2_1:72930248-72930267 None:intergenic 45.0%
GTCAGACGGAATTGTAGTGA+TGG - chr2_1:72930285-72930304 Msa0223380:intron 45.0%
ATAGCGGCCATTTCCTATGT+TGG + chr2_1:72930663-72930682 None:intergenic 45.0%
! TATTCGGAGGCATGCGAATA+TGG + chr2_1:72930703-72930722 None:intergenic 45.0%
! GCCTTACACTGCATTTTGCT+AGG - chr2_1:72930758-72930777 Msa0223380:intron 45.0%
CCCTAGCAAAATGCAGTGTA+AGG + chr2_1:72930762-72930781 None:intergenic 45.0%
! CAACCAAATGGTTTTCAGCG+AGG - chr2_1:72930797-72930816 Msa0223380:intron 45.0%
TTTCAGCGAGGTATACAGCT+CGG - chr2_1:72930809-72930828 Msa0223380:intron 45.0%
AGGTCCTTGTTGCATACTGA+AGG + chr2_1:72931758-72931777 None:intergenic 45.0%
TCAAATGAAAGTCCTCAGGG+AGG - chr2_1:72931870-72931889 Msa0223380:CDS 45.0%
ACTCAAGGTGAAGCTAGCAA+GGG - chr2_1:72931936-72931955 Msa0223380:CDS 45.0%
! TGTTGTTGTCGAGGTTCGGT+TGG + chr2_1:72927541-72927560 None:intergenic 50.0%
GTAGTTGTAAGAGCAAGGCG+TGG - chr2_1:72927819-72927838 Msa0223380:CDS 50.0%
AGTGGGCCTTTATCGTGTAC+CGG - chr2_1:72928395-72928414 Msa0223380:intron 50.0%
!!! CGTCATTTTAGTGCTGACCC+GGG + chr2_1:72929025-72929044 None:intergenic 50.0%
!!! CCGTCATTTTAGTGCTGACC+CGG + chr2_1:72929026-72929045 None:intergenic 50.0%
CCGGGTCAGCACTAAAATGA+CGG - chr2_1:72929023-72929042 Msa0223380:intron 50.0%
! GTTTTGTGATTTGAGGGGCG+TGG + chr2_1:72930002-72930021 None:intergenic 50.0%
TGATCACTCACCTGTCTGAG+AGG - chr2_1:72930263-72930282 Msa0223380:CDS 50.0%
AAAGACTCGGCGACCAACAT+AGG - chr2_1:72930647-72930666 Msa0223380:intron 50.0%
TCGGCGACCAACATAGGAAA+TGG - chr2_1:72930653-72930672 Msa0223380:intron 50.0%
TGTCAACATCTTGCTGCTGC+AGG - chr2_1:72931145-72931164 Msa0223380:intron 50.0%
ATGCAGGCTAAACTCATGGC+TGG + chr2_1:72931241-72931260 None:intergenic 50.0%
CTAGTGACATCCCTTTGTCC+CGG + chr2_1:72931319-72931338 None:intergenic 50.0%
CAAGAACTGGGAAGCTAGTG+CGG - chr2_1:72931436-72931455 Msa0223380:intron 50.0%
AAGGAAAGCCGAAGAGCCTA+TGG - chr2_1:72931465-72931484 Msa0223380:intron 50.0%
AGGAAAGCCGAAGAGCCTAT+GGG - chr2_1:72931466-72931485 Msa0223380:intron 50.0%
AACTCCTCCCATAGGCTCTT+CGG + chr2_1:72931476-72931495 None:intergenic 50.0%
ATGCAACAAGGACCTACACG+TGG - chr2_1:72931763-72931782 Msa0223380:intron 50.0%
ACACCAAGCAACAGCACTCA+AGG - chr2_1:72931921-72931940 Msa0223380:CDS 50.0%
! TCACCTTGAGTGCTGTTGCT+TGG + chr2_1:72931927-72931946 None:intergenic 50.0%
CACTCAAGGTGAAGCTAGCA+AGG - chr2_1:72931935-72931954 Msa0223380:CDS 50.0%
! CAAGGGAAACACAAGCGTTG+AGG - chr2_1:72931953-72931972 Msa0223380:CDS 50.0%
! GTGTTGCCAACTGCGGATTG+TGG + chr2_1:72928443-72928462 None:intergenic 55.0%
CTCTCTCTCTCTTCCGCTGA+TGG - chr2_1:72929115-72929134 Msa0223380:intron 55.0%
CACCTGTCTGAGAGGTCAGA+CGG - chr2_1:72930271-72930290 Msa0223380:CDS 55.0%
TTCCGTCTGACCTCTCAGAC+AGG + chr2_1:72930276-72930295 None:intergenic 55.0%
AAAGCCGAAGAGCCTATGGG+AGG - chr2_1:72931469-72931488 Msa0223380:intron 55.0%
GAGCCTATGGGAGGAGTTGT+CGG - chr2_1:72931478-72931497 Msa0223380:intron 55.0%
TCACCGACAACTCCTCCCAT+AGG + chr2_1:72931484-72931503 None:intergenic 55.0%
GAAGCTAGTGCGGCTGCACA+AGG - chr2_1:72931446-72931465 Msa0223380:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 72927485 72932239 72927485 ID=Msa0223380;Name=Msa0223380
chr2_1 mRNA 72927485 72932239 72927485 ID=Msa0223380-mRNA-1;Parent=Msa0223380;Name=Msa0223380-mRNA-1;_AED=0.25;_eAED=0.25;_QI=127|1|1|1|1|1|4|205|270
chr2_1 exon 72927485 72927908 72927485 ID=Msa0223380-mRNA-1:exon:21243;Parent=Msa0223380-mRNA-1
chr2_1 exon 72928225 72928319 72928225 ID=Msa0223380-mRNA-1:exon:21242;Parent=Msa0223380-mRNA-1
chr2_1 exon 72930136 72930295 72930136 ID=Msa0223380-mRNA-1:exon:21241;Parent=Msa0223380-mRNA-1
chr2_1 exon 72931774 72932239 72931774 ID=Msa0223380-mRNA-1:exon:21240;Parent=Msa0223380-mRNA-1
chr2_1 five_prime_UTR 72932113 72932239 72932113 ID=Msa0223380-mRNA-1:five_prime_utr;Parent=Msa0223380-mRNA-1
chr2_1 CDS 72931774 72932112 72931774 ID=Msa0223380-mRNA-1:cds;Parent=Msa0223380-mRNA-1
chr2_1 CDS 72930136 72930295 72930136 ID=Msa0223380-mRNA-1:cds;Parent=Msa0223380-mRNA-1
chr2_1 CDS 72928225 72928319 72928225 ID=Msa0223380-mRNA-1:cds;Parent=Msa0223380-mRNA-1
chr2_1 CDS 72927690 72927908 72927690 ID=Msa0223380-mRNA-1:cds;Parent=Msa0223380-mRNA-1
chr2_1 three_prime_UTR 72927485 72927689 72927485 ID=Msa0223380-mRNA-1:three_prime_utr;Parent=Msa0223380-mRNA-1
Gene Sequence

>Msa0223380

ATGCATGGATTAACTCTCCCTTTTCTTCTTCCTTCTTGTAACATGTTACTTTCTCTTTCTTCTTCTACTCACCGATTTCTTCAACCATCTTCATGCTTCCAAAACCAAAACCAAACGAGTTCTTCAATTTCTATGCCTAGTTTCAGAATCAGATATAGAAAGCAGCATGAGAACAAAGGAAGAGGTGGCTATAGAAATAGAATAAGGGTAGTTGTAAGAGCAAGGCGTGGTGAGTCTCCATATGAAGTTCTTGGTTTGTCTCCATCTGCATCTGTGAATGAAATCAAAAAGGCTTATAGGAAACTAGCTCTTAAGTATCATCCTGATGTTAATAAAGAGGACAATGCACAGGAGAAATTTTTGAGGATAAAACATGCATACAATACATTGCTAAATTCTAGTTCCCGCAGAAAGTATGATTCTGAAAATCGTGGTTTTAATTCTTCTCAAAGAAGCCAGAGTTGGAATCAACAAGTTGAAGAAGAATTTTATGGATTAGGAGACTTCTTTAAGGATCTTCAAGAAGAGTTCAAGAACTGGGAAGCTAGTGCGGCTGCACAAGGAAAGCCGAAGAGCCTATGGGAGGAGTTGTCGGAAATAGGCGAAGAATTTGTGGAGTTCCTCGAGAAAGAACTCAATATTGTTGATTCAAATGAAAGTCCTCAGGGAGGAAATTCATCTAATTTATATGAGACAGAGACACCAAGCAACAGCACTCAAGGTGAAGCTAGCAAGGGAAACACAAGCGTTGAGGATAACCTTGATGAAATAGAAGCCACTCTAGCTCGGTTAAAAAAGGAGTTAGGCTTATAG

Protein sequence

>Msa0223380

MHGLTLPFLLPSCNMLLSLSSSTHRFLQPSSCFQNQNQTSSSISMPSFRIRYRKQHENKGRGGYRNRIRVVVRARRGESPYEVLGLSPSASVNEIKKAYRKLALKYHPDVNKEDNAQEKFLRIKHAYNTLLNSSSRRKYDSENRGFNSSQRSQSWNQQVEEEFYGLGDFFKDLQEEFKNWEASAAAQGKPKSLWEELSEIGEEFVEFLEKELNIVDSNESPQGGNSSNLYETETPSNSTQGEASKGNTSVEDNLDEIEATLARLKKELGL*