Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0581920 | XP_003607906.1 | 97.093 | 172 | 5 | 0 | 1 | 172 | 1 | 172 | 5.17e-119 | 343 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0581920 | sp|Q9SSL1|CAR7_ARATH | 55.488 | 164 | 73 | 0 | 1 | 164 | 1 | 164 | 2.54e-62 | 192 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0581920 | G7JJZ3 | 97.093 | 172 | 5 | 0 | 1 | 172 | 1 | 172 | 2.47e-119 | 343 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0581920 | -0.831080 | 2.043950e-55 | -8.615850e-47 |
| Msa0008850 | Msa0581920 | 0.824845 | 6.472421e-54 | -8.615850e-47 |
| Msa0032610 | Msa0581920 | 0.839391 | 1.629937e-57 | -8.615850e-47 |
| Msa0038310 | Msa0581920 | 0.837934 | 3.877556e-57 | -8.615850e-47 |
| Msa0044710 | Msa0581920 | 0.818663 | 1.743027e-52 | -8.615850e-47 |
| Msa0047470 | Msa0581920 | 0.804623 | 1.976530e-49 | -8.615850e-47 |
| Msa0055280 | Msa0581920 | 0.801570 | 8.458886e-49 | -8.615850e-47 |
| Msa0068410 | Msa0581920 | 0.804045 | 2.608354e-49 | -8.615850e-47 |
| Msa0069260 | Msa0581920 | 0.827409 | 1.589467e-54 | -8.615850e-47 |
| Msa0069280 | Msa0581920 | 0.814190 | 1.747756e-51 | -8.615850e-47 |
| Msa0069310 | Msa0581920 | 0.813591 | 2.368868e-51 | -8.615850e-47 |
| Msa0071550 | Msa0581920 | 0.826332 | 2.875641e-54 | -8.615850e-47 |
| Msa0071910 | Msa0581920 | -0.804445 | 2.153149e-49 | -8.615850e-47 |
| Msa0086090 | Msa0581920 | 0.801024 | 1.094256e-48 | -8.615850e-47 |
| Msa0087110 | Msa0581920 | 0.822472 | 2.326419e-53 | -8.615850e-47 |
| Msa0092990 | Msa0581920 | 0.807502 | 4.898106e-50 | -8.615850e-47 |
| Msa0101060 | Msa0581920 | 0.804597 | 2.000947e-49 | -8.615850e-47 |
| Msa0111310 | Msa0581920 | 0.833541 | 5.025739e-56 | -8.615850e-47 |
| Msa0114250 | Msa0581920 | 0.811515 | 6.736370e-51 | -8.615850e-47 |
| Msa0120340 | Msa0581920 | 0.804395 | 2.204772e-49 | -8.615850e-47 |
| Msa0132620 | Msa0581920 | 0.803486 | 3.407762e-49 | -8.615850e-47 |
| Msa0145950 | Msa0581920 | 0.823201 | 1.573392e-53 | -8.615850e-47 |
| Msa0148120 | Msa0581920 | 0.838989 | 2.071678e-57 | -8.615850e-47 |
| Msa0152170 | Msa0581920 | 0.806996 | 6.270641e-50 | -8.615850e-47 |
| Msa0156650 | Msa0581920 | -0.813527 | 2.446918e-51 | -8.615850e-47 |
| Msa0159750 | Msa0581920 | 0.800134 | 1.662122e-48 | -8.615850e-47 |
| Msa0168100 | Msa0581920 | 0.813516 | 2.460220e-51 | -8.615850e-47 |
| Msa0172780 | Msa0581920 | 0.805078 | 1.588221e-49 | -8.615850e-47 |
| Msa0178350 | Msa0581920 | 0.818545 | 1.853740e-52 | -8.615850e-47 |
| Msa0196020 | Msa0581920 | -0.851984 | 6.214401e-61 | -8.615850e-47 |
| Msa0219970 | Msa0581920 | 0.802928 | 4.444553e-49 | -8.615850e-47 |
| Msa0223100 | Msa0581920 | 0.872587 | 2.836379e-67 | -8.615850e-47 |
| Msa0223290 | Msa0581920 | 0.886374 | 3.617397e-72 | -8.615850e-47 |
| Msa0223380 | Msa0581920 | 0.896802 | 2.600863e-76 | -8.615850e-47 |
| Msa0233610 | Msa0581920 | 0.800691 | 1.280048e-48 | -8.615850e-47 |
| Msa0365490 | Msa0581920 | 0.847177 | 1.364135e-59 | -8.615850e-47 |
| Msa0377530 | Msa0581920 | 0.834976 | 2.195417e-56 | -8.615850e-47 |
| Msa0380040 | Msa0581920 | 0.820080 | 8.286050e-53 | -8.615850e-47 |
| Msa0388030 | Msa0581920 | -0.806239 | 9.059675e-50 | -8.615850e-47 |
| Msa0389810 | Msa0581920 | 0.818622 | 1.780601e-52 | -8.615850e-47 |
| Msa0404220 | Msa0581920 | 0.802275 | 6.062284e-49 | -8.615850e-47 |
| Msa0404700 | Msa0581920 | 0.801492 | 8.777312e-49 | -8.615850e-47 |
| Msa0414070 | Msa0581920 | 0.823041 | 1.714980e-53 | -8.615850e-47 |
| Msa0414950 | Msa0581920 | -0.802943 | 4.412520e-49 | -8.615850e-47 |
| Msa0416320 | Msa0581920 | 0.852815 | 3.604051e-61 | -8.615850e-47 |
| Msa0419620 | Msa0581920 | -0.803446 | 3.472804e-49 | -8.615850e-47 |
| Msa0420000 | Msa0581920 | 0.811192 | 7.917880e-51 | -8.615850e-47 |
| Msa0426810 | Msa0581920 | 0.807570 | 4.739432e-50 | -8.615850e-47 |
| Msa0429290 | Msa0581920 | 0.827458 | 1.546931e-54 | -8.615850e-47 |
| Msa0431520 | Msa0581920 | 0.811060 | 8.454522e-51 | -8.615850e-47 |
| Msa0431830 | Msa0581920 | 0.820845 | 5.530615e-53 | -8.615850e-47 |
| Msa0442850 | Msa0581920 | 0.802484 | 5.489393e-49 | -8.615850e-47 |
| Msa0448120 | Msa0581920 | 0.802512 | 5.417177e-49 | -8.615850e-47 |
| Msa0458440 | Msa0581920 | 0.812329 | 4.477402e-51 | -8.615850e-47 |
| Msa0462590 | Msa0581920 | 0.820436 | 6.865262e-53 | -8.615850e-47 |
| Msa0464420 | Msa0581920 | 0.804122 | 2.513644e-49 | -8.615850e-47 |
| Msa0464900 | Msa0581920 | 0.843962 | 1.014700e-58 | -8.615850e-47 |
| Msa0465680 | Msa0581920 | -0.800016 | 1.756160e-48 | -8.615850e-47 |
| Msa0467900 | Msa0581920 | -0.805625 | 1.219600e-49 | -8.615850e-47 |
| Msa0467920 | Msa0581920 | -0.802735 | 4.872357e-49 | -8.615850e-47 |
| Msa0468130 | Msa0581920 | 0.823669 | 1.223022e-53 | -8.615850e-47 |
| Msa0471790 | Msa0581920 | 0.841911 | 3.565338e-58 | -8.615850e-47 |
| Msa0473240 | Msa0581920 | 0.841187 | 5.530773e-58 | -8.615850e-47 |
| Msa0475580 | Msa0581920 | 0.826521 | 2.591594e-54 | -8.615850e-47 |
| Msa0480320 | Msa0581920 | 0.829299 | 5.562272e-55 | -8.615850e-47 |
| Msa0480600 | Msa0581920 | 0.809716 | 1.649334e-50 | -8.615850e-47 |
| Msa0482680 | Msa0581920 | 0.817208 | 3.715849e-52 | -8.615850e-47 |
| Msa0252180 | Msa0581920 | 0.827049 | 1.938481e-54 | -8.615850e-47 |
| Msa0266210 | Msa0581920 | 0.819469 | 1.142715e-52 | -8.615850e-47 |
| Msa0269450 | Msa0581920 | 0.809706 | 1.657273e-50 | -8.615850e-47 |
| Msa0275400 | Msa0581920 | -0.834283 | 3.278559e-56 | -8.615850e-47 |
| Msa0279210 | Msa0581920 | -0.833071 | 6.582460e-56 | -8.615850e-47 |
| Msa0279250 | Msa0581920 | -0.809564 | 1.777633e-50 | -8.615850e-47 |
| Msa0287670 | Msa0581920 | 0.814809 | 1.275401e-51 | -8.615850e-47 |
| Msa0288240 | Msa0581920 | 0.863398 | 2.560843e-64 | -8.615850e-47 |
| Msa0288320 | Msa0581920 | 0.818627 | 1.776046e-52 | -8.615850e-47 |
| Msa0288330 | Msa0581920 | 0.867908 | 9.670692e-66 | -8.615850e-47 |
| Msa0296760 | Msa0581920 | 0.807102 | 5.954967e-50 | -8.615850e-47 |
| Msa0302650 | Msa0581920 | 0.875485 | 2.969203e-68 | -8.615850e-47 |
| Msa0304700 | Msa0581920 | 0.853506 | 2.284963e-61 | -8.615850e-47 |
| Msa0307110 | Msa0581920 | 0.813606 | 2.351338e-51 | -8.615850e-47 |
| Msa0307830 | Msa0581920 | -0.800533 | 1.378669e-48 | -8.615850e-47 |
| Msa0308770 | Msa0581920 | 0.803233 | 3.843880e-49 | -8.615850e-47 |
| Msa0312310 | Msa0581920 | 0.800483 | 1.410818e-48 | -8.615850e-47 |
| Msa0314120 | Msa0581920 | 0.804690 | 1.914335e-49 | -8.615850e-47 |
| Msa0315240 | Msa0581920 | 0.800175 | 1.630153e-48 | -8.615850e-47 |
| Msa0318970 | Msa0581920 | -0.829325 | 5.483134e-55 | -8.615850e-47 |
| Msa0326670 | Msa0581920 | 0.872167 | 3.915801e-67 | -8.615850e-47 |
| Msa0328210 | Msa0581920 | 0.817498 | 3.196609e-52 | -8.615850e-47 |
| Msa0335040 | Msa0581920 | 0.801655 | 8.127772e-49 | -8.615850e-47 |
| Msa0336270 | Msa0581920 | 0.813581 | 2.380707e-51 | -8.615850e-47 |
| Msa0339870 | Msa0581920 | 0.838469 | 2.822954e-57 | -8.615850e-47 |
| Msa0349680 | Msa0581920 | 0.815224 | 1.031459e-51 | -8.615850e-47 |
| Msa0357380 | Msa0581920 | 0.804113 | 2.525030e-49 | -8.615850e-47 |
| Msa0357390 | Msa0581920 | 0.812980 | 3.227037e-51 | -8.615850e-47 |
| Msa0362060 | Msa0581920 | 0.841733 | 3.972501e-58 | -8.615850e-47 |
| Msa0363170 | Msa0581920 | 0.814619 | 1.404873e-51 | -8.615850e-47 |
| Msa0490350 | Msa0581920 | 0.809298 | 2.027697e-50 | -8.615850e-47 |
| Msa0491500 | Msa0581920 | 0.858789 | 6.471414e-63 | -8.615850e-47 |
| Msa0491520 | Msa0581920 | 0.846357 | 2.285888e-59 | -8.615850e-47 |
| Msa0505060 | Msa0581920 | 0.818393 | 2.006516e-52 | -8.615850e-47 |
| Msa0505660 | Msa0581920 | 0.818265 | 2.145097e-52 | -8.615850e-47 |
| Msa0508200 | Msa0581920 | 0.821954 | 3.067272e-53 | -8.615850e-47 |
| Msa0511720 | Msa0581920 | -0.816352 | 5.780186e-52 | -8.615850e-47 |
| Msa0517490 | Msa0581920 | 0.833140 | 6.326456e-56 | -8.615850e-47 |
| Msa0519220 | Msa0581920 | 0.827020 | 1.969963e-54 | -8.615850e-47 |
| Msa0524890 | Msa0581920 | -0.805665 | 1.196071e-49 | -8.615850e-47 |
| Msa0529950 | Msa0581920 | 0.804176 | 2.449853e-49 | -8.615850e-47 |
| Msa0530380 | Msa0581920 | 0.840144 | 1.037988e-57 | -8.615850e-47 |
| Msa0531990 | Msa0581920 | -0.815461 | 9.136359e-52 | -8.615850e-47 |
| Msa0532100 | Msa0581920 | -0.822813 | 1.937700e-53 | -8.615850e-47 |
| Msa0535030 | Msa0581920 | 0.813483 | 2.501423e-51 | -8.615850e-47 |
| Msa0535060 | Msa0581920 | 0.817282 | 3.575343e-52 | -8.615850e-47 |
| Msa0553220 | Msa0581920 | -0.823813 | 1.131523e-53 | -8.615850e-47 |
| Msa0575990 | Msa0581920 | -0.803363 | 3.613309e-49 | -8.615850e-47 |
| Msa0576100 | Msa0581920 | -0.807307 | 5.388048e-50 | -8.615850e-47 |
| Msa0579340 | Msa0581920 | 0.869205 | 3.687264e-66 | -8.615850e-47 |
| Msa0581920 | Msa0587690 | 0.807586 | 4.703097e-50 | -8.615850e-47 |
| Msa0581920 | Msa0591770 | 0.828131 | 1.065820e-54 | -8.615850e-47 |
| Msa0581920 | Msa0598460 | 0.814795 | 1.284272e-51 | -8.615850e-47 |
| Msa0581920 | Msa0609970 | 0.815472 | 9.083446e-52 | -8.615850e-47 |
| Msa0581920 | Msa0610770 | 0.936335 | 2.046223e-97 | -8.615850e-47 |
| Msa0581920 | Msa0614990 | 0.806368 | 8.509563e-50 | -8.615850e-47 |
| Msa0581920 | Msa0617830 | 0.805036 | 1.620023e-49 | -8.615850e-47 |
| Msa0581920 | Msa0620640 | 0.808024 | 3.794911e-50 | -8.615850e-47 |
| Msa0581920 | Msa0622340 | 0.836888 | 7.187802e-57 | -8.615850e-47 |
| Msa0581920 | Msa0638280 | 0.823646 | 1.237991e-53 | -8.615850e-47 |
| Msa0581920 | Msa0638320 | 0.826959 | 2.037728e-54 | -8.615850e-47 |
| Msa0581920 | Msa0647450 | -0.804378 | 2.223242e-49 | -8.615850e-47 |
| Msa0581920 | Msa0650620 | 0.833378 | 5.520752e-56 | -8.615850e-47 |
| Msa0581920 | Msa0650650 | 0.851183 | 1.047472e-60 | -8.615850e-47 |
| Msa0581920 | Msa0650730 | 0.818501 | 1.896353e-52 | -8.615850e-47 |
| Msa0581920 | Msa0650740 | 0.851636 | 7.799781e-61 | -8.615850e-47 |
| Msa0581920 | Msa0651320 | 0.948575 | 7.182919e-107 | -8.615850e-47 |
| Msa0581920 | Msa0656270 | 0.801724 | 7.868357e-49 | -8.615850e-47 |
| Msa0581920 | Msa0662650 | 0.810118 | 1.351283e-50 | -8.615850e-47 |
| Msa0581920 | Msa0669850 | 0.817338 | 3.473631e-52 | -8.615850e-47 |
| Msa0581920 | Msa0677270 | 0.824381 | 8.325614e-54 | -8.615850e-47 |
| Msa0581920 | Msa0693490 | 0.900287 | 8.517210e-78 | -8.615850e-47 |
| Msa0581920 | Msa0694250 | 0.834506 | 2.881835e-56 | -8.615850e-47 |
| Msa0581920 | Msa0700070 | 0.800888 | 1.166678e-48 | -8.615850e-47 |
| Msa0581920 | Msa0708860 | 0.804067 | 2.580801e-49 | -8.615850e-47 |
| Msa0581920 | Msa0715110 | 0.808640 | 2.803778e-50 | -8.615850e-47 |
| Msa0581920 | Msa0743260 | 0.825628 | 4.224840e-54 | -8.615850e-47 |
| Msa0581920 | Msa0743640 | 0.823124 | 1.639955e-53 | -8.615850e-47 |
| Msa0581920 | Msa0755080 | 0.850299 | 1.858163e-60 | -8.615850e-47 |
| Msa0581920 | Msa0755090 | 0.844944 | 5.524860e-59 | -8.615850e-47 |
| Msa0581920 | Msa0782470 | 0.813410 | 2.595536e-51 | -8.615850e-47 |
| Msa0581920 | Msa0782490 | 0.836700 | 8.023180e-57 | -8.615850e-47 |
| Msa0581920 | Msa0787720 | 0.829543 | 4.854305e-55 | -8.615850e-47 |
| Msa0581920 | Msa0789270 | 0.838233 | 3.247697e-57 | -8.615850e-47 |
| Msa0581920 | Msa0789280 | 0.834188 | 3.463158e-56 | -8.615850e-47 |
| Msa0581920 | Msa0789290 | 0.834998 | 2.167215e-56 | -8.615850e-47 |
| Msa0581920 | Msa0789300 | 0.835078 | 2.068139e-56 | -8.615850e-47 |
| Msa0581920 | Msa0791910 | 0.803840 | 2.877472e-49 | -8.615850e-47 |
| Msa0581920 | Msa0792090 | 0.842755 | 2.130019e-58 | -8.615850e-47 |
| Msa0581920 | Msa0796950 | 0.820268 | 7.504663e-53 | -8.615850e-47 |
| Msa0581920 | Msa0797000 | 0.805294 | 1.430834e-49 | -8.615850e-47 |
| Msa0581920 | Msa0827470 | 0.825733 | 3.990078e-54 | -8.615850e-47 |
| Msa0581920 | Msa0828570 | 0.813837 | 2.091274e-51 | -8.615850e-47 |
| Msa0581920 | Msa0834450 | 0.848717 | 5.130606e-60 | -8.615850e-47 |
| Msa0581920 | Msa0834460 | 0.851173 | 1.054703e-60 | -8.615850e-47 |
| Msa0581920 | Msa0842970 | 0.841519 | 4.524025e-58 | -8.615850e-47 |
| Msa0581920 | Msa0847200 | 0.800896 | 1.162091e-48 | -8.615850e-47 |
| Msa0581920 | Msa0851740 | 0.800001 | 1.768317e-48 | -8.615850e-47 |
| Msa0581920 | Msa0863760 | 0.818414 | 1.984552e-52 | -8.615850e-47 |
| Msa0581920 | Msa0874500 | 0.817847 | 2.666462e-52 | -8.615850e-47 |
| Msa0581920 | Msa0874570 | 0.804281 | 2.329488e-49 | -8.615850e-47 |
| Msa0581920 | Msa0908170 | 0.847425 | 1.165965e-59 | -8.615850e-47 |
| Msa0581920 | Msa0935850 | 0.817265 | 3.606347e-52 | -8.615850e-47 |
| Msa0581920 | Msa0946080 | 0.848157 | 7.328521e-60 | -8.615850e-47 |
| Msa0581920 | Msa0950620 | 0.837691 | 4.477057e-57 | -8.615850e-47 |
| Msa0581920 | Msa0959010 | 0.806635 | 7.476716e-50 | -8.615850e-47 |
| Msa0581920 | Msa0964680 | 0.802166 | 6.383250e-49 | -8.615850e-47 |
| Msa0581920 | Msa0971860 | 0.815756 | 7.854719e-52 | -8.615850e-47 |
| Msa0581920 | Msa0982270 | 0.817402 | 3.360396e-52 | -8.615850e-47 |
| Msa0581920 | Msa0982590 | 0.812116 | 4.983807e-51 | -8.615850e-47 |
| Msa0581920 | Msa0993530 | 0.826521 | 2.592491e-54 | -8.615850e-47 |
| Msa0581920 | Msa1012920 | 0.801943 | 7.091955e-49 | -8.615850e-47 |
| Msa0581920 | Msa1015060 | 0.850174 | 2.013576e-60 | -8.615850e-47 |
| Msa0581920 | Msa1021340 | 0.817471 | 3.242256e-52 | -8.615850e-47 |
| Msa0581920 | Msa1026760 | 0.815804 | 7.661595e-52 | -8.615850e-47 |
| Msa0581920 | Msa1026790 | 0.816194 | 6.270330e-52 | -8.615850e-47 |
| Msa0581920 | Msa1039880 | 0.824058 | 9.913094e-54 | -8.615850e-47 |
| Msa0581920 | Msa1047720 | 0.822430 | 2.379015e-53 | -8.615850e-47 |
| Msa0581920 | Msa1056640 | 0.832162 | 1.106577e-55 | -8.615850e-47 |
| Msa0581920 | Msa1067920 | 0.825311 | 5.023542e-54 | -8.615850e-47 |
| Msa0581920 | Msa1069180 | 0.800957 | 1.129240e-48 | -8.615850e-47 |
| Msa0581920 | Msa1072460 | -0.836808 | 7.530882e-57 | -8.615850e-47 |
| Msa0581920 | Msa1077670 | 0.846068 | 2.739475e-59 | -8.615850e-47 |
| Msa0581920 | Msa1082820 | -0.807057 | 6.086748e-50 | -8.615850e-47 |
| Msa0581920 | Msa1092090 | 0.809650 | 1.704018e-50 | -8.615850e-47 |
| Msa0581920 | Msa1092820 | 0.846915 | 1.608906e-59 | -8.615850e-47 |
| Msa0581920 | Msa1113200 | 0.824840 | 6.489822e-54 | -8.615850e-47 |
| Msa0581920 | Msa1120620 | 0.819242 | 1.287229e-52 | -8.615850e-47 |
| Msa0581920 | Msa1130210 | -0.828639 | 8.041007e-55 | -8.615850e-47 |
| Msa0581920 | Msa1133660 | 0.809695 | 1.666122e-50 | -8.615850e-47 |
| Msa0581920 | Msa1157020 | 0.862437 | 5.070566e-64 | -8.615850e-47 |
| Msa0581920 | Msa1157920 | 0.830151 | 3.451815e-55 | -8.615850e-47 |
| Msa0581920 | Msa1177620 | 0.807111 | 5.928284e-50 | -8.615850e-47 |
| Msa0581920 | Msa1182640 | 0.809472 | 1.860313e-50 | -8.615850e-47 |
| Msa0581920 | Msa1182830 | 0.803834 | 2.885762e-49 | -8.615850e-47 |
| Msa0581920 | Msa1197170 | 0.800135 | 1.660987e-48 | -8.615850e-47 |
| Msa0581920 | Msa1205010 | -0.801798 | 7.594793e-49 | -8.615850e-47 |
| Msa0581920 | Msa1207460 | -0.830538 | 2.775823e-55 | -8.615850e-47 |
| Msa0581920 | Msa1217860 | 0.818623 | 1.779555e-52 | -8.615850e-47 |
| Msa0581920 | Msa1218650 | 0.841827 | 3.752272e-58 | -8.615850e-47 |
| Msa0581920 | Msa1219110 | 0.830479 | 2.870206e-55 | -8.615850e-47 |
| Msa0581920 | Msa1219430 | 0.806798 | 6.906502e-50 | -8.615850e-47 |
| Msa0581920 | Msa1222030 | -0.804318 | 2.288666e-49 | -8.615850e-47 |
| Msa0581920 | Msa1229850 | 0.803231 | 3.848498e-49 | -8.615850e-47 |
| Msa0581920 | Msa1233500 | 0.808133 | 3.597284e-50 | -8.615850e-47 |
| Msa0581920 | Msa1236070 | -0.834988 | 2.179430e-56 | -8.615850e-47 |
| Msa0581920 | Msa1237030 | 0.814985 | 1.165296e-51 | -8.615850e-47 |
| Msa0581920 | Msa1249920 | 0.829325 | 5.481845e-55 | -8.615850e-47 |
| Msa0581920 | Msa1251470 | 0.811925 | 5.486407e-51 | -8.615850e-47 |
| Msa0581920 | Msa1272130 | 0.806075 | 9.811113e-50 | -8.615850e-47 |
| Msa0581920 | Msa1280130 | 0.834288 | 3.268478e-56 | -8.615850e-47 |
| Msa0581920 | Msa1282920 | 0.819191 | 1.321878e-52 | -8.615850e-47 |
| Msa0581920 | Msa1287360 | 0.809274 | 2.051474e-50 | -8.615850e-47 |
| Msa0581920 | Msa1291350 | 0.833089 | 6.516333e-56 | -8.615850e-47 |
| Msa0581920 | Msa1300350 | -0.800247 | 1.576486e-48 | -8.615850e-47 |
| Msa0581920 | Msa1300860 | 0.823307 | 1.485878e-53 | -8.615850e-47 |
| Msa0581920 | Msa1303160 | 0.807592 | 4.689341e-50 | -8.615850e-47 |
| Msa0581920 | Msa1306750 | 0.800140 | 1.657562e-48 | -8.615850e-47 |
| Msa0581920 | Msa1307740 | 0.818305 | 2.100921e-52 | -8.615850e-47 |
| Msa0581920 | Msa1308330 | -0.828153 | 1.053130e-54 | -8.615850e-47 |
| Msa0581920 | Msa1335970 | -0.806216 | 9.159838e-50 | -8.615850e-47 |
| Msa0581920 | Msa1350690 | 0.813559 | 2.407594e-51 | -8.615850e-47 |
| Msa0581920 | Msa1358870 | -0.802265 | 6.089490e-49 | -8.615850e-47 |
| Msa0581920 | Msa1369530 | 0.809103 | 2.232482e-50 | -8.615850e-47 |
| Msa0581920 | Msa1383480 | 0.852270 | 5.153740e-61 | -8.615850e-47 |
| Msa0581920 | Msa1386430 | 0.809212 | 2.115989e-50 | -8.615850e-47 |
| Msa0581920 | Msa1395570 | 0.835009 | 2.153679e-56 | -8.615850e-47 |
| Msa0581920 | Msa1397970 | 0.819850 | 9.353016e-53 | -8.615850e-47 |
| Msa0581920 | Msa1403580 | -0.809917 | 1.492839e-50 | -8.615850e-47 |
| Msa0581920 | Msa1403930 | -0.836871 | 7.257307e-57 | -8.615850e-47 |
| Msa0581920 | Msa1404670 | 0.807393 | 5.167414e-50 | -8.615850e-47 |
| Msa0581920 | Msa1404720 | 0.810692 | 1.015700e-50 | -8.615850e-47 |
| Msa0581920 | Msa1419110 | 0.829986 | 3.787038e-55 | -8.615850e-47 |
| Msa0581920 | Msa1427830 | 0.824409 | 8.200033e-54 | -8.615850e-47 |
| Msa0581920 | Msa1439230 | 0.835792 | 1.364956e-56 | -8.615850e-47 |
| Msa0581920 | Msa1439960 | 0.825499 | 4.533823e-54 | -8.615850e-47 |
| Msa0581920 | Msa1442220 | -0.839529 | 1.500718e-57 | -8.615850e-47 |
| Msa0581920 | Msa1443290 | -0.800550 | 1.367710e-48 | -8.615850e-47 |
| Msa0581920 | Msa1445420 | -0.803562 | 3.284925e-49 | -8.615850e-47 |
| Msa0581920 | Msa1454110 | 0.828620 | 8.123171e-55 | -8.615850e-47 |
| Msa0581920 | Msa1455390 | 0.806653 | 7.408357e-50 | -8.615850e-47 |
| Msa0581920 | Msa1456650 | 0.803257 | 3.800281e-49 | -8.615850e-47 |
| Msa0581920 | Msa1458550 | 0.801663 | 8.096594e-49 | -8.615850e-47 |
| Msa0581920 | Msa1459760 | -0.807640 | 4.578784e-50 | -8.615850e-47 |
| Msa0581920 | Msa1461250 | -0.813723 | 2.215032e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0581920 | MtrunA17_Chr4g0043861 | 97.093 | 172 | 5 | 0 | 1 | 172 | 1 | 172 | 4.75e-123 | 343 |
| Msa0581920 | MtrunA17_Chr1g0160811 | 66.871 | 163 | 53 | 1 | 3 | 164 | 4 | 166 | 1.25e-76 | 226 |
| Msa0581920 | MtrunA17_Chr3g0111361 | 54.601 | 163 | 74 | 0 | 1 | 163 | 1 | 163 | 3.52e-64 | 194 |
| Msa0581920 | MtrunA17_Chr8g0393081 | 51.220 | 164 | 80 | 0 | 1 | 164 | 17 | 180 | 5.77e-58 | 179 |
| Msa0581920 | MtrunA17_Chr2g0280981 | 51.235 | 162 | 79 | 0 | 3 | 164 | 2 | 163 | 1.38e-57 | 177 |
| Msa0581920 | MtrunA17_Chr6g0478401 | 49.390 | 164 | 83 | 0 | 1 | 164 | 13 | 176 | 7.57e-56 | 174 |
| Msa0581920 | MtrunA17_Chr8g0380381 | 40.000 | 160 | 95 | 1 | 1 | 159 | 85 | 244 | 1.73e-36 | 126 |
| Msa0581920 | MtrunA17_Chr8g0352751 | 37.654 | 162 | 100 | 1 | 1 | 161 | 1 | 162 | 2.28e-33 | 116 |
| Msa0581920 | MtrunA17_Chr2g0292461 | 38.889 | 162 | 94 | 3 | 1 | 159 | 168 | 327 | 4.15e-32 | 117 |
| Msa0581920 | MtrunA17_Chr3g0083541 | 37.952 | 166 | 94 | 2 | 1 | 161 | 239 | 400 | 1.72e-30 | 114 |
| Msa0581920 | MtrunA17_Chr2g0290631 | 38.158 | 152 | 92 | 1 | 1 | 150 | 1 | 152 | 1.66e-29 | 106 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0581920 | AT1G70810.1 | 55.488 | 164 | 73 | 0 | 1 | 164 | 1 | 164 | 2.59e-63 | 192 |
| Msa0581920 | AT1G48590.4 | 55.090 | 167 | 72 | 1 | 1 | 167 | 6 | 169 | 1.21e-61 | 188 |
| Msa0581920 | AT1G48590.1 | 55.090 | 167 | 72 | 1 | 1 | 167 | 6 | 169 | 1.21e-61 | 188 |
| Msa0581920 | AT1G48590.2 | 55.090 | 167 | 72 | 1 | 1 | 167 | 37 | 200 | 1.46e-61 | 189 |
| Msa0581920 | AT1G70790.3 | 53.659 | 164 | 74 | 1 | 5 | 166 | 6 | 169 | 6.87e-60 | 184 |
| Msa0581920 | AT1G70790.2 | 53.659 | 164 | 74 | 1 | 5 | 166 | 6 | 169 | 6.87e-60 | 184 |
| Msa0581920 | AT1G70790.1 | 53.659 | 164 | 74 | 1 | 5 | 166 | 6 | 169 | 6.87e-60 | 184 |
| Msa0581920 | AT3G17980.1 | 51.829 | 164 | 79 | 0 | 1 | 164 | 13 | 176 | 1.34e-58 | 181 |
| Msa0581920 | AT1G23140.1 | 51.852 | 162 | 78 | 0 | 1 | 162 | 1 | 162 | 3.32e-58 | 179 |
| Msa0581920 | AT1G73580.1 | 48.780 | 164 | 84 | 0 | 1 | 164 | 4 | 167 | 5.90e-58 | 179 |
| Msa0581920 | AT2G01540.1 | 53.659 | 164 | 69 | 2 | 5 | 166 | 6 | 164 | 1.15e-57 | 179 |
| Msa0581920 | AT1G70800.1 | 50.955 | 157 | 77 | 0 | 1 | 157 | 10 | 166 | 2.99e-55 | 172 |
| Msa0581920 | AT1G66360.1 | 45.402 | 174 | 93 | 1 | 1 | 172 | 1 | 174 | 2.90e-53 | 167 |
| Msa0581920 | AT5G37740.1 | 46.707 | 167 | 86 | 1 | 1 | 164 | 1 | 167 | 1.29e-51 | 163 |
| Msa0581920 | AT5G37740.2 | 44.068 | 177 | 86 | 2 | 1 | 164 | 1 | 177 | 3.50e-48 | 154 |
| Msa0581920 | AT1G70790.4 | 55.385 | 130 | 56 | 1 | 39 | 166 | 3 | 132 | 3.64e-46 | 148 |
| Msa0581920 | AT1G48590.3 | 45.509 | 167 | 56 | 2 | 1 | 167 | 37 | 168 | 3.21e-43 | 141 |
| Msa0581920 | AT4G05330.2 | 41.875 | 160 | 88 | 3 | 1 | 157 | 140 | 297 | 2.85e-34 | 122 |
| Msa0581920 | AT4G21160.2 | 41.875 | 160 | 88 | 3 | 1 | 157 | 176 | 333 | 1.04e-33 | 122 |
| Msa0581920 | AT4G21160.3 | 41.875 | 160 | 88 | 3 | 1 | 157 | 176 | 333 | 1.04e-33 | 122 |
| Msa0581920 | AT4G21160.1 | 41.875 | 160 | 88 | 3 | 1 | 157 | 176 | 333 | 1.04e-33 | 122 |
| Msa0581920 | AT4G21160.4 | 41.875 | 160 | 88 | 3 | 1 | 157 | 176 | 333 | 1.04e-33 | 122 |
| Msa0581920 | AT4G05330.3 | 41.875 | 160 | 88 | 3 | 1 | 157 | 175 | 332 | 1.04e-33 | 122 |
| Msa0581920 | AT4G05330.1 | 41.875 | 160 | 88 | 3 | 1 | 157 | 175 | 332 | 1.04e-33 | 122 |
| Msa0581920 | AT3G07940.1 | 39.506 | 162 | 97 | 1 | 1 | 161 | 224 | 385 | 2.88e-32 | 119 |
| Msa0581920 | AT5G47710.1 | 37.500 | 160 | 98 | 2 | 1 | 158 | 1 | 160 | 1.93e-31 | 111 |
| Msa0581920 | AT5G47710.2 | 37.500 | 160 | 98 | 2 | 1 | 158 | 1 | 160 | 1.93e-31 | 111 |
| Msa0581920 | AT5G47710.3 | 37.500 | 160 | 98 | 2 | 1 | 158 | 1 | 160 | 1.93e-31 | 111 |
| Msa0581920 | AT5G47710.4 | 37.500 | 160 | 98 | 2 | 1 | 158 | 1 | 160 | 1.93e-31 | 111 |
Find 44 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATCTTAAACTCATTTCT+TGG | 0.237962 | 4_1:+87479173 | None:intergenic |
| TTTCACTGTGGACGACAAAA+TGG | 0.248123 | 4_1:-87479350 | Msa0581920:CDS |
| TCATTATCAAATTAAGATTA+AGG | 0.276142 | 4_1:+87478965 | None:intergenic |
| GTCAGTTCTTCATTCCATTC+AGG | 0.282274 | 4_1:+87480184 | None:intergenic |
| ATCTTCACACATTGGAGATA+TGG | 0.313339 | 4_1:+87479304 | None:intergenic |
| GTTTCGATGGCAAACATTCT+AGG | 0.356912 | 4_1:-87480574 | Msa0581920:exon |
| GCTAGGCAATTAGTCGTATC+TGG | 0.362744 | 4_1:+87479235 | None:intergenic |
| TGATGTCAAATTCACTGATA+TGG | 0.369022 | 4_1:-87478945 | Msa0581920:three_prime_UTR |
| GTCTTGACTACATGTCCATC+TGG | 0.383427 | 4_1:+87479265 | None:intergenic |
| CTCGGATAAGCCTTTGCCTT+CGG | 0.389439 | 4_1:+87479093 | None:intergenic |
| ATGCAAACACAAGGTTGTTA+AGG | 0.454129 | 4_1:-87480600 | Msa0581920:five_prime_UTR |
| CAATCTTACATAGTAACTTC+AGG | 0.461633 | 4_1:+87478991 | None:intergenic |
| TCCATGGTGACAAGAACATA+AGG | 0.466228 | 4_1:+87480487 | None:intergenic |
| GTTGTTAAGGTTGGTTTCGA+TGG | 0.484495 | 4_1:-87480587 | Msa0581920:exon |
| CCATACGCAGCTACTCTCTT+CGG | 0.489124 | 4_1:+87479213 | None:intergenic |
| CTAACTAACTTGTTCTTCCA+TGG | 0.492512 | 4_1:+87480471 | None:intergenic |
| AGTAGCTGCGTATGGAGAGA+TGG | 0.493455 | 4_1:-87479205 | Msa0581920:CDS |
| AAGATAACTGCCATCCTGAA+TGG | 0.495110 | 4_1:-87480198 | Msa0581920:CDS |
| TGTTAACACACCAATACATC+TGG | 0.500731 | 4_1:-87480146 | Msa0581920:intron |
| TTCACTGTGGACGACAAAAT+GGG | 0.505157 | 4_1:-87479349 | Msa0581920:CDS |
| ATATCTCCAATGTGTGAAGA+TGG | 0.506001 | 4_1:-87479302 | Msa0581920:CDS |
| AAACACAAGGTTGTTAAGGT+TGG | 0.510802 | 4_1:-87480596 | Msa0581920:five_prime_UTR |
| TGAGTACTGACCAGATGTAT+TGG | 0.524936 | 4_1:+87480136 | None:intergenic |
| TATCTCCAATGTGTGAAGAT+GGG | 0.525049 | 4_1:-87479301 | Msa0581920:CDS |
| CCGAAGAGAGTAGCTGCGTA+TGG | 0.539890 | 4_1:-87479213 | Msa0581920:CDS |
| GACAAGAACATAAGGGTCGC+TGG | 0.578982 | 4_1:+87480495 | None:intergenic |
| AGATTGAGAAATGTTGACTC+TGG | 0.584076 | 4_1:-87479157 | Msa0581920:CDS |
| CCCTTATGTTCTTGTCACCA+TGG | 0.587591 | 4_1:-87480488 | Msa0581920:CDS |
| CCATGGTGACAAGAACATAA+GGG | 0.590675 | 4_1:+87480488 | None:intergenic |
| CGCAGCTACTCTCTTCGGCT+AGG | 0.597984 | 4_1:+87479218 | None:intergenic |
| CTAATGCATAAAGTTAGAGA+AGG | 0.604755 | 4_1:+87479049 | None:intergenic |
| GTTACAGAATCCGAAGGCAA+AGG | 0.605128 | 4_1:-87479103 | Msa0581920:CDS |
| AAGTACTAGTCGAAATTGAG+TGG | 0.607422 | 4_1:-87479132 | Msa0581920:CDS |
| TCTTGACTACATGTCCATCT+GGG | 0.611492 | 4_1:+87479266 | None:intergenic |
| GGGTTGAGCGATCTCCCAGA+TGG | 0.612527 | 4_1:-87479280 | Msa0581920:CDS |
| GTTCTTCATTCCATTCAGGA+TGG | 0.627122 | 4_1:+87480188 | None:intergenic |
| ATCTCCAATGTGTGAAGATG+GGG | 0.633945 | 4_1:-87479300 | Msa0581920:CDS |
| TCAACCCCATCTTCACACAT+TGG | 0.658196 | 4_1:+87479296 | None:intergenic |
| CGACAAAGACACTTTCACTG+TGG | 0.661032 | 4_1:-87479362 | Msa0581920:CDS |
| GTACTCCTAAAACTCAACCT+CGG | 0.669415 | 4_1:+87479075 | None:intergenic |
| ATTGATGTTACAGAATCCGA+AGG | 0.687927 | 4_1:-87479109 | Msa0581920:CDS |
| CGAAGGCAAAGGCTTATCCG+AGG | 0.695987 | 4_1:-87479092 | Msa0581920:CDS |
| AAGTTGTGCATGCAAACACA+AGG | 0.715116 | 4_1:-87480609 | Msa0581920:five_prime_UTR |
| TCGCTGGTACGAGAATCATG+AGG | 0.744769 | 4_1:+87480511 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAATAAAAGGAAAAA+TGG | - | chr4_1:87479500-87479519 | Msa0581920:intron | 10.0% |
| !! | AAATAAATAAAAGGAAAAAT+GGG | - | chr4_1:87479501-87479520 | Msa0581920:intron | 10.0% |
| !!! | GAAATTTTGTTTATTATTAA+AGG | - | chr4_1:87480649-87480668 | Msa0581920:five_prime_UTR | 10.0% |
| !! | AAAATAAATAAAAGGAAAAA+TGG | - | chr4_1:87479500-87479519 | Msa0581920:intron | 10.0% |
| !! | AAATAAATAAAAGGAAAAAT+GGG | - | chr4_1:87479501-87479520 | Msa0581920:intron | 10.0% |
| !! | TTATGATATGTTACTATAAA+TGG | - | chr4_1:87479320-87479339 | Msa0581920:CDS | 15.0% |
| !! | CAAAAGAGAAAATAAATAAA+AGG | - | chr4_1:87479492-87479511 | Msa0581920:intron | 15.0% |
| !!! | TTATCTTAGAAATTTTATCT+CGG | + | chr4_1:87479718-87479737 | None:intergenic | 15.0% |
| !!! | ATCTTAGAAATTTTATCTTA+GGG | + | chr4_1:87479747-87479766 | None:intergenic | 15.0% |
| !!! | AATCTTAGAAATTTTATCTT+AGG | + | chr4_1:87479748-87479767 | None:intergenic | 15.0% |
| !! | TTTGAATTTAAATTAACCAT+AGG | - | chr4_1:87479880-87479899 | Msa0581920:intron | 15.0% |
| !! | TCATTATCAAATTAAGATTA+AGG | + | chr4_1:87480606-87480625 | None:intergenic | 15.0% |
| !! | TTATGATATGTTACTATAAA+TGG | - | chr4_1:87479320-87479339 | Msa0581920:CDS | 15.0% |
| !! | CAAAAGAGAAAATAAATAAA+AGG | - | chr4_1:87479492-87479511 | Msa0581920:intron | 15.0% |
| !!! | TTATCTTAGAAATTTTATCT+CGG | + | chr4_1:87479718-87479737 | None:intergenic | 15.0% |
| !!! | ATCTTAGAAATTTTATCTTA+GGG | + | chr4_1:87479747-87479766 | None:intergenic | 15.0% |
| !!! | AATCTTAGAAATTTTATCTT+AGG | + | chr4_1:87479748-87479767 | None:intergenic | 15.0% |
| !! | TTTGAATTTAAATTAACCAT+AGG | - | chr4_1:87479880-87479899 | Msa0581920:intron | 15.0% |
| !! | TCATTATCAAATTAAGATTA+AGG | + | chr4_1:87480606-87480625 | None:intergenic | 15.0% |
| !!! | ATCAACATAAAATACTGATT+TGG | + | chr4_1:87479183-87479202 | None:intergenic | 20.0% |
| !! | ATAGTAGTCTAATAAATTAG+AGG | + | chr4_1:87479580-87479599 | None:intergenic | 20.0% |
| !!! | TCAATTTGAAACGAAAAAAA+CGG | + | chr4_1:87480127-87480146 | None:intergenic | 20.0% |
| !!! | ATCAACATAAAATACTGATT+TGG | + | chr4_1:87479183-87479202 | None:intergenic | 20.0% |
| !! | ATAGTAGTCTAATAAATTAG+AGG | + | chr4_1:87479580-87479599 | None:intergenic | 20.0% |
| !!! | TCAATTTGAAACGAAAAAAA+CGG | + | chr4_1:87480127-87480146 | None:intergenic | 20.0% |
| ! | TCTAAGAACTGATTGAAATT+TGG | - | chr4_1:87479204-87479223 | Msa0581920:CDS | 25.0% |
| !! | ACTAAGATCTTTCTTTTTAC+TGG | - | chr4_1:87479263-87479282 | Msa0581920:CDS | 25.0% |
| !!! | AATTTTTTATGCGTTTCCTT+TGG | - | chr4_1:87479621-87479640 | Msa0581920:intron | 25.0% |
| ! | TAAATTAACCATAGGATCAA+AGG | - | chr4_1:87479888-87479907 | Msa0581920:intron | 25.0% |
| ! | AAATTAACCATAGGATCAAA+GGG | - | chr4_1:87479889-87479908 | Msa0581920:intron | 25.0% |
| ! | ATGAGAATCACAAACAAATA+CGG | - | chr4_1:87480032-87480051 | Msa0581920:intron | 25.0% |
| ! | ACCACCAACAATTTAATATT+AGG | + | chr4_1:87480154-87480173 | None:intergenic | 25.0% |
| ! | TCAATCTTAAACTCATTTCT+TGG | + | chr4_1:87480398-87480417 | None:intergenic | 25.0% |
| ! | TCTAAGAACTGATTGAAATT+TGG | - | chr4_1:87479204-87479223 | Msa0581920:CDS | 25.0% |
| !! | ACTAAGATCTTTCTTTTTAC+TGG | - | chr4_1:87479263-87479282 | Msa0581920:CDS | 25.0% |
| !!! | AATTTTTTATGCGTTTCCTT+TGG | - | chr4_1:87479621-87479640 | Msa0581920:intron | 25.0% |
| ! | TAAATTAACCATAGGATCAA+AGG | - | chr4_1:87479888-87479907 | Msa0581920:intron | 25.0% |
| ! | AAATTAACCATAGGATCAAA+GGG | - | chr4_1:87479889-87479908 | Msa0581920:intron | 25.0% |
| ! | ATGAGAATCACAAACAAATA+CGG | - | chr4_1:87480032-87480051 | Msa0581920:intron | 25.0% |
| ! | ACCACCAACAATTTAATATT+AGG | + | chr4_1:87480154-87480173 | None:intergenic | 25.0% |
| ! | TCAATCTTAAACTCATTTCT+TGG | + | chr4_1:87480398-87480417 | None:intergenic | 25.0% |
| ATCAGACTTCGTATCAAAAA+AGG | - | chr4_1:87479021-87479040 | Msa0581920:three_prime_UTR | 30.0% | |
| TTCTGCAACTTAAACAAAGT+TGG | + | chr4_1:87479462-87479481 | None:intergenic | 30.0% | |
| ATCACACAAGTATAAACCAA+AGG | + | chr4_1:87479640-87479659 | None:intergenic | 30.0% | |
| TGGTTTATACTTGTGTGATT+TGG | - | chr4_1:87479641-87479660 | Msa0581920:intron | 30.0% | |
| CTCAGTTGAAGATAAGTTTA+AGG | + | chr4_1:87479779-87479798 | None:intergenic | 30.0% | |
| AAGTAATGTAGCCTAACAAA+TGG | - | chr4_1:87479980-87479999 | Msa0581920:intron | 30.0% | |
| TGTGATTTAAGCCATTTGTT+AGG | + | chr4_1:87479994-87480013 | None:intergenic | 30.0% | |
| CGAGCCTAATATTAAATTGT+TGG | - | chr4_1:87480147-87480166 | Msa0581920:CDS | 30.0% | |
| GCCTAATATTAAATTGTTGG+TGG | - | chr4_1:87480150-87480169 | Msa0581920:CDS | 30.0% | |
| CTAATGCATAAAGTTAGAGA+AGG | + | chr4_1:87480522-87480541 | None:intergenic | 30.0% | |
| CAATCTTACATAGTAACTTC+AGG | + | chr4_1:87480580-87480599 | None:intergenic | 30.0% | |
| TGATGTCAAATTCACTGATA+TGG | - | chr4_1:87480623-87480642 | Msa0581920:five_prime_UTR | 30.0% | |
| ATCAGACTTCGTATCAAAAA+AGG | - | chr4_1:87479021-87479040 | Msa0581920:three_prime_UTR | 30.0% | |
| TTCTGCAACTTAAACAAAGT+TGG | + | chr4_1:87479462-87479481 | None:intergenic | 30.0% | |
| ATCACACAAGTATAAACCAA+AGG | + | chr4_1:87479640-87479659 | None:intergenic | 30.0% | |
| TGGTTTATACTTGTGTGATT+TGG | - | chr4_1:87479641-87479660 | Msa0581920:intron | 30.0% | |
| CTCAGTTGAAGATAAGTTTA+AGG | + | chr4_1:87479779-87479798 | None:intergenic | 30.0% | |
| AAGTAATGTAGCCTAACAAA+TGG | - | chr4_1:87479980-87479999 | Msa0581920:intron | 30.0% | |
| TGTGATTTAAGCCATTTGTT+AGG | + | chr4_1:87479994-87480013 | None:intergenic | 30.0% | |
| CGAGCCTAATATTAAATTGT+TGG | - | chr4_1:87480147-87480166 | Msa0581920:CDS | 30.0% | |
| GCCTAATATTAAATTGTTGG+TGG | - | chr4_1:87480150-87480169 | Msa0581920:CDS | 30.0% | |
| CTAATGCATAAAGTTAGAGA+AGG | + | chr4_1:87480522-87480541 | None:intergenic | 30.0% | |
| CAATCTTACATAGTAACTTC+AGG | + | chr4_1:87480580-87480599 | None:intergenic | 30.0% | |
| TGATGTCAAATTCACTGATA+TGG | - | chr4_1:87480623-87480642 | Msa0581920:five_prime_UTR | 30.0% | |
| ATGCAAACACAAGGTTGTTA+AGG | - | chr4_1:87478968-87478987 | Msa0581920:three_prime_UTR | 35.0% | |
| AAACACAAGGTTGTTAAGGT+TGG | - | chr4_1:87478972-87478991 | Msa0581920:three_prime_UTR | 35.0% | |
| !! | CTAACTAACTTGTTCTTCCA+TGG | + | chr4_1:87479100-87479119 | None:intergenic | 35.0% |
| TGTTAACACACCAATACATC+TGG | - | chr4_1:87479422-87479441 | Msa0581920:intron | 35.0% | |
| !! | CAAGTTTTTGGACAACGATA+TGG | + | chr4_1:87479829-87479848 | None:intergenic | 35.0% |
| CATATCGTTGTCCAAAAACT+TGG | - | chr4_1:87479827-87479846 | Msa0581920:intron | 35.0% | |
| AACTGAGTTCATCACAAACT+TGG | - | chr4_1:87479912-87479931 | Msa0581920:intron | 35.0% | |
| ATCTTCACACATTGGAGATA+TGG | + | chr4_1:87480267-87480286 | None:intergenic | 35.0% | |
| ATATCTCCAATGTGTGAAGA+TGG | - | chr4_1:87480266-87480285 | Msa0581920:intron | 35.0% | |
| TATCTCCAATGTGTGAAGAT+GGG | - | chr4_1:87480267-87480286 | Msa0581920:intron | 35.0% | |
| !! | AGATTGAGAAATGTTGACTC+TGG | - | chr4_1:87480411-87480430 | Msa0581920:intron | 35.0% |
| AAGTACTAGTCGAAATTGAG+TGG | - | chr4_1:87480436-87480455 | Msa0581920:intron | 35.0% | |
| ATTGATGTTACAGAATCCGA+AGG | - | chr4_1:87480459-87480478 | Msa0581920:intron | 35.0% | |
| ATGCAAACACAAGGTTGTTA+AGG | - | chr4_1:87478968-87478987 | Msa0581920:three_prime_UTR | 35.0% | |
| AAACACAAGGTTGTTAAGGT+TGG | - | chr4_1:87478972-87478991 | Msa0581920:three_prime_UTR | 35.0% | |
| !! | CTAACTAACTTGTTCTTCCA+TGG | + | chr4_1:87479100-87479119 | None:intergenic | 35.0% |
| TGTTAACACACCAATACATC+TGG | - | chr4_1:87479422-87479441 | Msa0581920:intron | 35.0% | |
| !! | CAAGTTTTTGGACAACGATA+TGG | + | chr4_1:87479829-87479848 | None:intergenic | 35.0% |
| CATATCGTTGTCCAAAAACT+TGG | - | chr4_1:87479827-87479846 | Msa0581920:intron | 35.0% | |
| AACTGAGTTCATCACAAACT+TGG | - | chr4_1:87479912-87479931 | Msa0581920:intron | 35.0% | |
| ATCTTCACACATTGGAGATA+TGG | + | chr4_1:87480267-87480286 | None:intergenic | 35.0% | |
| ATATCTCCAATGTGTGAAGA+TGG | - | chr4_1:87480266-87480285 | Msa0581920:intron | 35.0% | |
| TATCTCCAATGTGTGAAGAT+GGG | - | chr4_1:87480267-87480286 | Msa0581920:intron | 35.0% | |
| !! | AGATTGAGAAATGTTGACTC+TGG | - | chr4_1:87480411-87480430 | Msa0581920:intron | 35.0% |
| AAGTACTAGTCGAAATTGAG+TGG | - | chr4_1:87480436-87480455 | Msa0581920:intron | 35.0% | |
| ATTGATGTTACAGAATCCGA+AGG | - | chr4_1:87480459-87480478 | Msa0581920:intron | 35.0% | |
| AAGTTGTGCATGCAAACACA+AGG | - | chr4_1:87478959-87478978 | Msa0581920:three_prime_UTR | 40.0% | |
| !! | GTTGTTAAGGTTGGTTTCGA+TGG | - | chr4_1:87478981-87479000 | Msa0581920:three_prime_UTR | 40.0% |
| GTTTCGATGGCAAACATTCT+AGG | - | chr4_1:87478994-87479013 | Msa0581920:three_prime_UTR | 40.0% | |
| CCATGGTGACAAGAACATAA+GGG | + | chr4_1:87479083-87479102 | None:intergenic | 40.0% | |
| TCCATGGTGACAAGAACATA+AGG | + | chr4_1:87479084-87479103 | None:intergenic | 40.0% | |
| AAGATAACTGCCATCCTGAA+TGG | - | chr4_1:87479370-87479389 | Msa0581920:CDS | 40.0% | |
| GTTCTTCATTCCATTCAGGA+TGG | + | chr4_1:87479383-87479402 | None:intergenic | 40.0% | |
| GTCAGTTCTTCATTCCATTC+AGG | + | chr4_1:87479387-87479406 | None:intergenic | 40.0% | |
| !! | TGAGTACTGACCAGATGTAT+TGG | + | chr4_1:87479435-87479454 | None:intergenic | 40.0% |
| GTTCATCACAAACTTGGTTG+CGG | - | chr4_1:87479918-87479937 | Msa0581920:intron | 40.0% | |
| ATACGGCTGATGCATTGTAT+TGG | - | chr4_1:87480049-87480068 | Msa0581920:intron | 40.0% | |
| TGATGTTGTAGCCTAGATGA+AGG | - | chr4_1:87480090-87480109 | Msa0581920:intron | 40.0% | |
| GATGTTGTAGCCTAGATGAA+GGG | - | chr4_1:87480091-87480110 | Msa0581920:intron | 40.0% | |
| TTTCACTGTGGACGACAAAA+TGG | - | chr4_1:87480218-87480237 | Msa0581920:CDS | 40.0% | |
| TTCACTGTGGACGACAAAAT+GGG | - | chr4_1:87480219-87480238 | Msa0581920:CDS | 40.0% | |
| ATCTCCAATGTGTGAAGATG+GGG | - | chr4_1:87480268-87480287 | Msa0581920:intron | 40.0% | |
| TCTTGACTACATGTCCATCT+GGG | + | chr4_1:87480305-87480324 | None:intergenic | 40.0% | |
| ! | CTTATCCGAGGTTGAGTTTT+AGG | - | chr4_1:87480488-87480507 | Msa0581920:CDS | 40.0% |
| GTACTCCTAAAACTCAACCT+CGG | + | chr4_1:87480496-87480515 | None:intergenic | 40.0% | |
| AAGTTGTGCATGCAAACACA+AGG | - | chr4_1:87478959-87478978 | Msa0581920:three_prime_UTR | 40.0% | |
| !! | GTTGTTAAGGTTGGTTTCGA+TGG | - | chr4_1:87478981-87479000 | Msa0581920:three_prime_UTR | 40.0% |
| GTTTCGATGGCAAACATTCT+AGG | - | chr4_1:87478994-87479013 | Msa0581920:three_prime_UTR | 40.0% | |
| CCATGGTGACAAGAACATAA+GGG | + | chr4_1:87479083-87479102 | None:intergenic | 40.0% | |
| TCCATGGTGACAAGAACATA+AGG | + | chr4_1:87479084-87479103 | None:intergenic | 40.0% | |
| AAGATAACTGCCATCCTGAA+TGG | - | chr4_1:87479370-87479389 | Msa0581920:CDS | 40.0% | |
| GTTCTTCATTCCATTCAGGA+TGG | + | chr4_1:87479383-87479402 | None:intergenic | 40.0% | |
| GTCAGTTCTTCATTCCATTC+AGG | + | chr4_1:87479387-87479406 | None:intergenic | 40.0% | |
| !! | TGAGTACTGACCAGATGTAT+TGG | + | chr4_1:87479435-87479454 | None:intergenic | 40.0% |
| GTTCATCACAAACTTGGTTG+CGG | - | chr4_1:87479918-87479937 | Msa0581920:intron | 40.0% | |
| ATACGGCTGATGCATTGTAT+TGG | - | chr4_1:87480049-87480068 | Msa0581920:intron | 40.0% | |
| TGATGTTGTAGCCTAGATGA+AGG | - | chr4_1:87480090-87480109 | Msa0581920:intron | 40.0% | |
| GATGTTGTAGCCTAGATGAA+GGG | - | chr4_1:87480091-87480110 | Msa0581920:intron | 40.0% | |
| TTTCACTGTGGACGACAAAA+TGG | - | chr4_1:87480218-87480237 | Msa0581920:CDS | 40.0% | |
| TTCACTGTGGACGACAAAAT+GGG | - | chr4_1:87480219-87480238 | Msa0581920:CDS | 40.0% | |
| ATCTCCAATGTGTGAAGATG+GGG | - | chr4_1:87480268-87480287 | Msa0581920:intron | 40.0% | |
| TCTTGACTACATGTCCATCT+GGG | + | chr4_1:87480305-87480324 | None:intergenic | 40.0% | |
| ! | CTTATCCGAGGTTGAGTTTT+AGG | - | chr4_1:87480488-87480507 | Msa0581920:CDS | 40.0% |
| GTACTCCTAAAACTCAACCT+CGG | + | chr4_1:87480496-87480515 | None:intergenic | 40.0% | |
| CCCTTATGTTCTTGTCACCA+TGG | - | chr4_1:87479080-87479099 | Msa0581920:exon | 45.0% | |
| ! | GTAGACTCTCGCCAAGTTTT+TGG | + | chr4_1:87479841-87479860 | None:intergenic | 45.0% |
| CTCAGTTCCCTTTGATCCTA+TGG | + | chr4_1:87479899-87479918 | None:intergenic | 45.0% | |
| CGACAAAGACACTTTCACTG+TGG | - | chr4_1:87480206-87480225 | Msa0581920:CDS | 45.0% | |
| TCAACCCCATCTTCACACAT+TGG | + | chr4_1:87480275-87480294 | None:intergenic | 45.0% | |
| GTCTTGACTACATGTCCATC+TGG | + | chr4_1:87480306-87480325 | None:intergenic | 45.0% | |
| GCTAGGCAATTAGTCGTATC+TGG | + | chr4_1:87480336-87480355 | None:intergenic | 45.0% | |
| GTTACAGAATCCGAAGGCAA+AGG | - | chr4_1:87480465-87480484 | Msa0581920:intron | 45.0% | |
| CCCTTATGTTCTTGTCACCA+TGG | - | chr4_1:87479080-87479099 | Msa0581920:exon | 45.0% | |
| ! | GTAGACTCTCGCCAAGTTTT+TGG | + | chr4_1:87479841-87479860 | None:intergenic | 45.0% |
| CTCAGTTCCCTTTGATCCTA+TGG | + | chr4_1:87479899-87479918 | None:intergenic | 45.0% | |
| CGACAAAGACACTTTCACTG+TGG | - | chr4_1:87480206-87480225 | Msa0581920:CDS | 45.0% | |
| TCAACCCCATCTTCACACAT+TGG | + | chr4_1:87480275-87480294 | None:intergenic | 45.0% | |
| GTCTTGACTACATGTCCATC+TGG | + | chr4_1:87480306-87480325 | None:intergenic | 45.0% | |
| GCTAGGCAATTAGTCGTATC+TGG | + | chr4_1:87480336-87480355 | None:intergenic | 45.0% | |
| GTTACAGAATCCGAAGGCAA+AGG | - | chr4_1:87480465-87480484 | Msa0581920:intron | 45.0% | |
| TCGCTGGTACGAGAATCATG+AGG | + | chr4_1:87479060-87479079 | None:intergenic | 50.0% | |
| GACAAGAACATAAGGGTCGC+TGG | + | chr4_1:87479076-87479095 | None:intergenic | 50.0% | |
| TCTGTGTGCACCCTTCATCT+AGG | + | chr4_1:87480104-87480123 | None:intergenic | 50.0% | |
| CCATACGCAGCTACTCTCTT+CGG | + | chr4_1:87480358-87480377 | None:intergenic | 50.0% | |
| AGTAGCTGCGTATGGAGAGA+TGG | - | chr4_1:87480363-87480382 | Msa0581920:intron | 50.0% | |
| CTCGGATAAGCCTTTGCCTT+CGG | + | chr4_1:87480478-87480497 | None:intergenic | 50.0% | |
| TCGCTGGTACGAGAATCATG+AGG | + | chr4_1:87479060-87479079 | None:intergenic | 50.0% | |
| GACAAGAACATAAGGGTCGC+TGG | + | chr4_1:87479076-87479095 | None:intergenic | 50.0% | |
| TCTGTGTGCACCCTTCATCT+AGG | + | chr4_1:87480104-87480123 | None:intergenic | 50.0% | |
| CCATACGCAGCTACTCTCTT+CGG | + | chr4_1:87480358-87480377 | None:intergenic | 50.0% | |
| AGTAGCTGCGTATGGAGAGA+TGG | - | chr4_1:87480363-87480382 | Msa0581920:intron | 50.0% | |
| CTCGGATAAGCCTTTGCCTT+CGG | + | chr4_1:87480478-87480497 | None:intergenic | 50.0% | |
| CCGAAGAGAGTAGCTGCGTA+TGG | - | chr4_1:87480355-87480374 | Msa0581920:intron | 55.0% | |
| CGAAGGCAAAGGCTTATCCG+AGG | - | chr4_1:87480476-87480495 | Msa0581920:intron | 55.0% | |
| CCGAAGAGAGTAGCTGCGTA+TGG | - | chr4_1:87480355-87480374 | Msa0581920:intron | 55.0% | |
| CGAAGGCAAAGGCTTATCCG+AGG | - | chr4_1:87480476-87480495 | Msa0581920:intron | 55.0% | |
| GGGTTGAGCGATCTCCCAGA+TGG | - | chr4_1:87480288-87480307 | Msa0581920:intron | 60.0% | |
| CGCAGCTACTCTCTTCGGCT+AGG | + | chr4_1:87480353-87480372 | None:intergenic | 60.0% | |
| GGGTTGAGCGATCTCCCAGA+TGG | - | chr4_1:87480288-87480307 | Msa0581920:intron | 60.0% | |
| CGCAGCTACTCTCTTCGGCT+AGG | + | chr4_1:87480353-87480372 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 87478920 | 87480670 | 87478920 | ID=Msa0581920;Name=Msa0581920 |
| chr4_1 | mRNA | 87478920 | 87480670 | 87478920 | ID=Msa0581920-mRNA-1;Parent=Msa0581920;Name=Msa0581920-mRNA-1;_AED=0.05;_eAED=0.05;_QI=80|1|1|1|1|1|3|161|172 |
| chr4_1 | exon | 87478920 | 87479392 | 87478920 | ID=Msa0581920-mRNA-1:exon:32515;Parent=Msa0581920-mRNA-1 |
| chr4_1 | exon | 87480147 | 87480242 | 87480147 | ID=Msa0581920-mRNA-1:exon:32514;Parent=Msa0581920-mRNA-1 |
| chr4_1 | exon | 87480480 | 87480670 | 87480480 | ID=Msa0581920-mRNA-1:exon:32513;Parent=Msa0581920-mRNA-1 |
| chr4_1 | five_prime_UTR | 87480591 | 87480670 | 87480591 | ID=Msa0581920-mRNA-1:five_prime_utr;Parent=Msa0581920-mRNA-1 |
| chr4_1 | CDS | 87480480 | 87480590 | 87480480 | ID=Msa0581920-mRNA-1:cds;Parent=Msa0581920-mRNA-1 |
| chr4_1 | CDS | 87480147 | 87480242 | 87480147 | ID=Msa0581920-mRNA-1:cds;Parent=Msa0581920-mRNA-1 |
| chr4_1 | CDS | 87479081 | 87479392 | 87479081 | ID=Msa0581920-mRNA-1:cds;Parent=Msa0581920-mRNA-1 |
| chr4_1 | three_prime_UTR | 87478920 | 87479080 | 87478920 | ID=Msa0581920-mRNA-1:three_prime_utr;Parent=Msa0581920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
