Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032320 | Msa1264260 | 0.803631 | 3.178522e-49 | -8.615850e-47 |
| Msa0679100 | Msa1264260 | 0.807187 | 5.714688e-50 | -8.615850e-47 |
| Msa0735310 | Msa1264260 | 0.807637 | 4.586537e-50 | -8.615850e-47 |
| Msa0753770 | Msa1264260 | 0.806496 | 7.997610e-50 | -8.615850e-47 |
| Msa0795660 | Msa1264260 | 0.806002 | 1.016081e-49 | -8.615850e-47 |
| Msa0814250 | Msa1264260 | 0.812454 | 4.205607e-51 | -8.615850e-47 |
| Msa0155330 | Msa1264260 | 0.800472 | 1.418080e-48 | -8.615850e-47 |
| Msa0171850 | Msa1264260 | 0.802929 | 4.442228e-49 | -8.615850e-47 |
| Msa0221600 | Msa1264260 | 0.811839 | 5.727312e-51 | -8.615850e-47 |
| Msa1264260 | Msa1323990 | 0.804921 | 1.712353e-49 | -8.615850e-47 |
| Msa1264260 | Msa1329450 | 0.821748 | 3.423202e-53 | -8.615850e-47 |
| Msa1264260 | Msa1373330 | 0.802557 | 5.302151e-49 | -8.615850e-47 |
| Msa1264260 | Msa1398860 | 0.801211 | 1.002249e-48 | -8.615850e-47 |
| Msa1083880 | Msa1264260 | 0.813476 | 2.511427e-51 | -8.615850e-47 |
| Msa1181170 | Msa1264260 | -0.800032 | 1.743255e-48 | -8.615850e-47 |
| Msa1223330 | Msa1264260 | 0.819300 | 1.248859e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 14 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCAGGAGATTCAGATATT+AGG | 0.318752 | 8_2:+67700306 | Msa1264260:CDS |
| ACGTGGAGATATCTTATTCC+AGG | 0.408219 | 8_2:+67701802 | Msa1264260:CDS |
| TTATATGAAATGCAGTACTA+AGG | 0.431580 | 8_2:+67701747 | Msa1264260:intron |
| ATAATTATACATTTGGATCC+TGG | 0.444469 | 8_2:-67701820 | None:intergenic |
| TACCTAATATCTGAATCTCC+TGG | 0.458804 | 8_2:-67700308 | None:intergenic |
| GAGAAATTGGATATAGCAAA+GGG | 0.467145 | 8_2:+67700227 | None:intergenic |
| CATAGGTGTATCGCAGTTTG+AGG | 0.468479 | 8_2:-67701444 | None:intergenic |
| ACTAAGGGCTATATATATGC+AGG | 0.530303 | 8_2:+67701763 | Msa1264260:CDS |
| AGAGAAATTGGATATAGCAA+AGG | 0.534255 | 8_2:+67700226 | None:intergenic |
| ACCTAATATCTGAATCTCCT+GGG | 0.537940 | 8_2:-67700307 | None:intergenic |
| TTGAGGGAAGCATTCATCCC+AGG | 0.562194 | 8_2:+67700290 | Msa1264260:CDS |
| TATATGAAATGCAGTACTAA+GGG | 0.566046 | 8_2:+67701748 | Msa1264260:intron |
| CTATATATATGCAGGTCACA+AGG | 0.606317 | 8_2:+67701771 | Msa1264260:CDS |
| GTCACAAGGAATGCTATACG+TGG | 0.695996 | 8_2:+67701785 | Msa1264260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAACTTAATGTAAAATA+AGG | - | chr8_2:67700566-67700585 | None:intergenic | 10.0% |
| !!! | AGAAAAGTATTAAATAATTT+AGG | + | chr8_2:67700838-67700857 | Msa1264260:intron | 10.0% |
| !!! | TTAATTATGTCTTTTTATTA+TGG | + | chr8_2:67701241-67701260 | Msa1264260:intron | 10.0% |
| !!! | TAATTATGTCTTTTTATTAT+GGG | + | chr8_2:67701242-67701261 | Msa1264260:intron | 10.0% |
| !! | AATTAACTTAATGTAAAATA+AGG | - | chr8_2:67700566-67700585 | None:intergenic | 10.0% |
| !!! | AGAAAAGTATTAAATAATTT+AGG | + | chr8_2:67700838-67700857 | Msa1264260:intron | 10.0% |
| !!! | TTAATTATGTCTTTTTATTA+TGG | + | chr8_2:67701241-67701260 | Msa1264260:intron | 10.0% |
| !!! | TAATTATGTCTTTTTATTAT+GGG | + | chr8_2:67701242-67701261 | Msa1264260:intron | 10.0% |
| !! | AATATTATGTTGAAGAAAAT+AGG | - | chr8_2:67700745-67700764 | None:intergenic | 15.0% |
| !!! | ATTTTCTTCAACATAATATT+AGG | + | chr8_2:67700745-67700764 | Msa1264260:intron | 15.0% |
| !!! | TTTCTTATCTAATTTTGTAT+TGG | + | chr8_2:67701318-67701337 | Msa1264260:intron | 15.0% |
| !! | AATATTATGTTGAAGAAAAT+AGG | - | chr8_2:67700745-67700764 | None:intergenic | 15.0% |
| !!! | ATTTTCTTCAACATAATATT+AGG | + | chr8_2:67700745-67700764 | Msa1264260:intron | 15.0% |
| !!! | TTTCTTATCTAATTTTGTAT+TGG | + | chr8_2:67701318-67701337 | Msa1264260:intron | 15.0% |
| !!! | TCTAAGTTGAAAAGAATAAA+AGG | + | chr8_2:67700357-67700376 | Msa1264260:intron | 20.0% |
| !!! | ATGTTGTTTGTAATTTTCTA+GGG | + | chr8_2:67700804-67700823 | Msa1264260:intron | 20.0% |
| !! | ATTTATCCATCTTAATGTAA+CGG | - | chr8_2:67701075-67701094 | None:intergenic | 20.0% |
| !! | TTACATTAAGATGGATAAAT+AGG | + | chr8_2:67701075-67701094 | Msa1264260:intron | 20.0% |
| !! | GATGATTTATGAATAGTTAA+AGG | - | chr8_2:67701275-67701294 | None:intergenic | 20.0% |
| !! | AATCATCTCTTATTCTTAAT+TGG | + | chr8_2:67701288-67701307 | Msa1264260:intron | 20.0% |
| !! | AATTTCATGATAGAAAAGAT+AGG | + | chr8_2:67701512-67701531 | Msa1264260:intron | 20.0% |
| !!! | AATTTTTTTTAAAGCATGTG+AGG | - | chr8_2:67701593-67701612 | None:intergenic | 20.0% |
| !!! | TCACATGCTTTAAAAAAAAT+TGG | + | chr8_2:67701592-67701611 | Msa1264260:intron | 20.0% |
| !!! | TCTAAGTTGAAAAGAATAAA+AGG | + | chr8_2:67700357-67700376 | Msa1264260:intron | 20.0% |
| !!! | ATGTTGTTTGTAATTTTCTA+GGG | + | chr8_2:67700804-67700823 | Msa1264260:intron | 20.0% |
| !! | ATTTATCCATCTTAATGTAA+CGG | - | chr8_2:67701075-67701094 | None:intergenic | 20.0% |
| !! | TTACATTAAGATGGATAAAT+AGG | + | chr8_2:67701075-67701094 | Msa1264260:intron | 20.0% |
| !! | GATGATTTATGAATAGTTAA+AGG | - | chr8_2:67701275-67701294 | None:intergenic | 20.0% |
| !! | AATCATCTCTTATTCTTAAT+TGG | + | chr8_2:67701288-67701307 | Msa1264260:intron | 20.0% |
| !! | AATTTCATGATAGAAAAGAT+AGG | + | chr8_2:67701512-67701531 | Msa1264260:intron | 20.0% |
| !!! | AATTTTTTTTAAAGCATGTG+AGG | - | chr8_2:67701593-67701612 | None:intergenic | 20.0% |
| !!! | TCACATGCTTTAAAAAAAAT+TGG | + | chr8_2:67701592-67701611 | Msa1264260:intron | 20.0% |
| !! | ACTATGATGTTTTACATTTG+AGG | + | chr8_2:67700273-67700292 | Msa1264260:CDS | 25.0% |
| !! | CTATGATGTTTTACATTTGA+GGG | + | chr8_2:67700274-67700293 | Msa1264260:CDS | 25.0% |
| ! | TAGAGATATATAAAACCCAT+TGG | - | chr8_2:67700341-67700360 | None:intergenic | 25.0% |
| ! | TTATTTCAACAAGTTTAGCA+TGG | - | chr8_2:67700385-67700404 | None:intergenic | 25.0% |
| !!! | AGACAAGGAGTTTTTTAAAA+AGG | - | chr8_2:67700409-67700428 | None:intergenic | 25.0% |
| !!! | TTTTTTCTGTAAATCTCAAC+TGG | + | chr8_2:67700504-67700523 | Msa1264260:intron | 25.0% |
| ! | ACAACATCATATCAATATAG+TGG | - | chr8_2:67700791-67700810 | None:intergenic | 25.0% |
| !!! | GATGTTGTTTGTAATTTTCT+AGG | + | chr8_2:67700803-67700822 | Msa1264260:intron | 25.0% |
| !! | ACTAATTTGTAACAATCACA+TGG | - | chr8_2:67700875-67700894 | None:intergenic | 25.0% |
| ! | ACAATATGTCAATATCATAG+AGG | + | chr8_2:67700896-67700915 | Msa1264260:intron | 25.0% |
| ! | TGAATGTAATGCAAATTGAT+AGG | + | chr8_2:67701182-67701201 | Msa1264260:intron | 25.0% |
| !! | TTTTAATACTAAGCTTGATC+TGG | + | chr8_2:67701346-67701365 | Msa1264260:intron | 25.0% |
| !! | CTTGTATTAGTATTTTGTTG+TGG | + | chr8_2:67701373-67701392 | Msa1264260:intron | 25.0% |
| !! | ATTTTACTAGCCATATTATC+AGG | + | chr8_2:67701406-67701425 | Msa1264260:intron | 25.0% |
| ! | TTATATGAAATGCAGTACTA+AGG | + | chr8_2:67701747-67701766 | Msa1264260:intron | 25.0% |
| ! | TATATGAAATGCAGTACTAA+GGG | + | chr8_2:67701748-67701767 | Msa1264260:intron | 25.0% |
| !! | ACTATGATGTTTTACATTTG+AGG | + | chr8_2:67700273-67700292 | Msa1264260:CDS | 25.0% |
| !! | CTATGATGTTTTACATTTGA+GGG | + | chr8_2:67700274-67700293 | Msa1264260:CDS | 25.0% |
| ! | TAGAGATATATAAAACCCAT+TGG | - | chr8_2:67700341-67700360 | None:intergenic | 25.0% |
| ! | TTATTTCAACAAGTTTAGCA+TGG | - | chr8_2:67700385-67700404 | None:intergenic | 25.0% |
| !!! | AGACAAGGAGTTTTTTAAAA+AGG | - | chr8_2:67700409-67700428 | None:intergenic | 25.0% |
| !!! | TTTTTTCTGTAAATCTCAAC+TGG | + | chr8_2:67700504-67700523 | Msa1264260:intron | 25.0% |
| ! | ACAACATCATATCAATATAG+TGG | - | chr8_2:67700791-67700810 | None:intergenic | 25.0% |
| !!! | GATGTTGTTTGTAATTTTCT+AGG | + | chr8_2:67700803-67700822 | Msa1264260:intron | 25.0% |
| !! | ACTAATTTGTAACAATCACA+TGG | - | chr8_2:67700875-67700894 | None:intergenic | 25.0% |
| ! | ACAATATGTCAATATCATAG+AGG | + | chr8_2:67700896-67700915 | Msa1264260:intron | 25.0% |
| ! | TGAATGTAATGCAAATTGAT+AGG | + | chr8_2:67701182-67701201 | Msa1264260:intron | 25.0% |
| !! | TTTTAATACTAAGCTTGATC+TGG | + | chr8_2:67701346-67701365 | Msa1264260:intron | 25.0% |
| !! | CTTGTATTAGTATTTTGTTG+TGG | + | chr8_2:67701373-67701392 | Msa1264260:intron | 25.0% |
| !! | ATTTTACTAGCCATATTATC+AGG | + | chr8_2:67701406-67701425 | Msa1264260:intron | 25.0% |
| ! | TTATATGAAATGCAGTACTA+AGG | + | chr8_2:67701747-67701766 | Msa1264260:intron | 25.0% |
| ! | TATATGAAATGCAGTACTAA+GGG | + | chr8_2:67701748-67701767 | Msa1264260:intron | 25.0% |
| TATTAGGTAAAGCTTACCAA+TGG | + | chr8_2:67700322-67700341 | Msa1264260:intron | 30.0% | |
| ATTAGGTAAAGCTTACCAAT+GGG | + | chr8_2:67700323-67700342 | Msa1264260:intron | 30.0% | |
| ! | GTTTTATATCACTCTGATAC+AGG | - | chr8_2:67700456-67700475 | None:intergenic | 30.0% |
| TGTCAATATCATAGAGGAAA+AGG | + | chr8_2:67700902-67700921 | Msa1264260:intron | 30.0% | |
| CAATTTGCATTACATTCACT+AGG | - | chr8_2:67701180-67701199 | None:intergenic | 30.0% | |
| TATCTCTTAGCCTGATAATA+TGG | - | chr8_2:67701419-67701438 | None:intergenic | 30.0% | |
| AATTGGTGCATTAAATTACC+AGG | + | chr8_2:67701609-67701628 | Msa1264260:intron | 30.0% | |
| !!! | GTTATTTTTGCTGACAACAA+AGG | - | chr8_2:67701663-67701682 | None:intergenic | 30.0% |
| TATTAGGTAAAGCTTACCAA+TGG | + | chr8_2:67700322-67700341 | Msa1264260:intron | 30.0% | |
| ATTAGGTAAAGCTTACCAAT+GGG | + | chr8_2:67700323-67700342 | Msa1264260:intron | 30.0% | |
| ! | GTTTTATATCACTCTGATAC+AGG | - | chr8_2:67700456-67700475 | None:intergenic | 30.0% |
| TGTCAATATCATAGAGGAAA+AGG | + | chr8_2:67700902-67700921 | Msa1264260:intron | 30.0% | |
| CAATTTGCATTACATTCACT+AGG | - | chr8_2:67701180-67701199 | None:intergenic | 30.0% | |
| TATCTCTTAGCCTGATAATA+TGG | - | chr8_2:67701419-67701438 | None:intergenic | 30.0% | |
| AATTGGTGCATTAAATTACC+AGG | + | chr8_2:67701609-67701628 | Msa1264260:intron | 30.0% | |
| !!! | GTTATTTTTGCTGACAACAA+AGG | - | chr8_2:67701663-67701682 | None:intergenic | 30.0% |
| ACCTAATATCTGAATCTCCT+GGG | - | chr8_2:67700310-67700329 | None:intergenic | 35.0% | |
| TACCTAATATCTGAATCTCC+TGG | - | chr8_2:67700311-67700330 | None:intergenic | 35.0% | |
| ! | AAACTAAACCAGTTTGCTCT+AGG | + | chr8_2:67700472-67700491 | Msa1264260:intron | 35.0% |
| AATTCTATCCTAGAGCAAAC+TGG | - | chr8_2:67700483-67700502 | None:intergenic | 35.0% | |
| !!! | TGCTCAAGTTTTGTTGCATA+AGG | - | chr8_2:67700598-67700617 | None:intergenic | 35.0% |
| CACTATTCTGACTTTCCAAT+GGG | - | chr8_2:67700627-67700646 | None:intergenic | 35.0% | |
| ATTGGAAAGTCAGAATAGTG+CGG | + | chr8_2:67700627-67700646 | Msa1264260:intron | 35.0% | |
| ! | TAGAGACTGATTTCTATCCT+TGG | + | chr8_2:67700992-67701011 | Msa1264260:intron | 35.0% |
| ACAATGCCGTTACATTAAGA+TGG | + | chr8_2:67701066-67701085 | Msa1264260:intron | 35.0% | |
| !!! | ACGCTAGCAACACAATTTTT+TGG | - | chr8_2:67701156-67701175 | None:intergenic | 35.0% |
| ATGATGTACTGCACATACAT+AGG | - | chr8_2:67701464-67701483 | None:intergenic | 35.0% | |
| !! | GTGATCCTAGAAATTGGTTT+TGG | + | chr8_2:67701634-67701653 | Msa1264260:intron | 35.0% |
| GGTTACCAAAACCAATTTCT+AGG | - | chr8_2:67701642-67701661 | None:intergenic | 35.0% | |
| ACTAAGGGCTATATATATGC+AGG | + | chr8_2:67701763-67701782 | Msa1264260:CDS | 35.0% | |
| CTATATATATGCAGGTCACA+AGG | + | chr8_2:67701771-67701790 | Msa1264260:CDS | 35.0% | |
| ACCTAATATCTGAATCTCCT+GGG | - | chr8_2:67700310-67700329 | None:intergenic | 35.0% | |
| TACCTAATATCTGAATCTCC+TGG | - | chr8_2:67700311-67700330 | None:intergenic | 35.0% | |
| ! | AAACTAAACCAGTTTGCTCT+AGG | + | chr8_2:67700472-67700491 | Msa1264260:intron | 35.0% |
| AATTCTATCCTAGAGCAAAC+TGG | - | chr8_2:67700483-67700502 | None:intergenic | 35.0% | |
| !!! | TGCTCAAGTTTTGTTGCATA+AGG | - | chr8_2:67700598-67700617 | None:intergenic | 35.0% |
| CACTATTCTGACTTTCCAAT+GGG | - | chr8_2:67700627-67700646 | None:intergenic | 35.0% | |
| ATTGGAAAGTCAGAATAGTG+CGG | + | chr8_2:67700627-67700646 | Msa1264260:intron | 35.0% | |
| ! | TAGAGACTGATTTCTATCCT+TGG | + | chr8_2:67700992-67701011 | Msa1264260:intron | 35.0% |
| ACAATGCCGTTACATTAAGA+TGG | + | chr8_2:67701066-67701085 | Msa1264260:intron | 35.0% | |
| !!! | ACGCTAGCAACACAATTTTT+TGG | - | chr8_2:67701156-67701175 | None:intergenic | 35.0% |
| ATGATGTACTGCACATACAT+AGG | - | chr8_2:67701464-67701483 | None:intergenic | 35.0% | |
| !! | GTGATCCTAGAAATTGGTTT+TGG | + | chr8_2:67701634-67701653 | Msa1264260:intron | 35.0% |
| GGTTACCAAAACCAATTTCT+AGG | - | chr8_2:67701642-67701661 | None:intergenic | 35.0% | |
| ACTAAGGGCTATATATATGC+AGG | + | chr8_2:67701763-67701782 | Msa1264260:CDS | 35.0% | |
| CTATATATATGCAGGTCACA+AGG | + | chr8_2:67701771-67701790 | Msa1264260:CDS | 35.0% | |
| TCCCAGGAGATTCAGATATT+AGG | + | chr8_2:67700306-67700325 | Msa1264260:CDS | 40.0% | |
| ACTTGAGCAATTCTTCCCAT+TGG | + | chr8_2:67700609-67700628 | Msa1264260:intron | 40.0% | |
| GCACTATTCTGACTTTCCAA+TGG | - | chr8_2:67700628-67700647 | None:intergenic | 40.0% | |
| TCTCTATCCATTGCTAGACA+CGG | + | chr8_2:67700932-67700951 | Msa1264260:intron | 40.0% | |
| TACCTCCCTTGAGTAATGAA+GGG | - | chr8_2:67700974-67700993 | None:intergenic | 40.0% | |
| GATTGAGAAATGGGAAACCA+AGG | - | chr8_2:67701012-67701031 | None:intergenic | 40.0% | |
| GCACAGAAGGATTGAGAAAT+GGG | - | chr8_2:67701021-67701040 | None:intergenic | 40.0% | |
| AGCACAGAAGGATTGAGAAA+TGG | - | chr8_2:67701022-67701041 | None:intergenic | 40.0% | |
| CAATCCTTCTGTGCTTATGA+TGG | + | chr8_2:67701027-67701046 | Msa1264260:intron | 40.0% | |
| GTGCAGTACATCATCACATA+AGG | + | chr8_2:67701470-67701489 | Msa1264260:intron | 40.0% | |
| TAACAGTAGATATGCCTGTC+AGG | + | chr8_2:67701679-67701698 | Msa1264260:intron | 40.0% | |
| ! | TCAGGCATTGTAACATGACA+TGG | + | chr8_2:67701697-67701716 | Msa1264260:intron | 40.0% |
| ACGTGGAGATATCTTATTCC+AGG | + | chr8_2:67701802-67701821 | Msa1264260:CDS | 40.0% | |
| TCCCAGGAGATTCAGATATT+AGG | + | chr8_2:67700306-67700325 | Msa1264260:CDS | 40.0% | |
| ACTTGAGCAATTCTTCCCAT+TGG | + | chr8_2:67700609-67700628 | Msa1264260:intron | 40.0% | |
| GCACTATTCTGACTTTCCAA+TGG | - | chr8_2:67700628-67700647 | None:intergenic | 40.0% | |
| TCTCTATCCATTGCTAGACA+CGG | + | chr8_2:67700932-67700951 | Msa1264260:intron | 40.0% | |
| TACCTCCCTTGAGTAATGAA+GGG | - | chr8_2:67700974-67700993 | None:intergenic | 40.0% | |
| GATTGAGAAATGGGAAACCA+AGG | - | chr8_2:67701012-67701031 | None:intergenic | 40.0% | |
| GCACAGAAGGATTGAGAAAT+GGG | - | chr8_2:67701021-67701040 | None:intergenic | 40.0% | |
| AGCACAGAAGGATTGAGAAA+TGG | - | chr8_2:67701022-67701041 | None:intergenic | 40.0% | |
| CAATCCTTCTGTGCTTATGA+TGG | + | chr8_2:67701027-67701046 | Msa1264260:intron | 40.0% | |
| GTGCAGTACATCATCACATA+AGG | + | chr8_2:67701470-67701489 | Msa1264260:intron | 40.0% | |
| TAACAGTAGATATGCCTGTC+AGG | + | chr8_2:67701679-67701698 | Msa1264260:intron | 40.0% | |
| ! | TCAGGCATTGTAACATGACA+TGG | + | chr8_2:67701697-67701716 | Msa1264260:intron | 40.0% |
| ACGTGGAGATATCTTATTCC+AGG | + | chr8_2:67701802-67701821 | Msa1264260:CDS | 40.0% | |
| AGTGACAACTCAGACAGACA+AGG | - | chr8_2:67700424-67700443 | None:intergenic | 45.0% | |
| TAGACACGGAGAGTAGTCTT+TGG | + | chr8_2:67700946-67700965 | Msa1264260:intron | 45.0% | |
| CTACCTCCCTTGAGTAATGA+AGG | - | chr8_2:67700975-67700994 | None:intergenic | 45.0% | |
| CTCACCATCATAAGCACAGA+AGG | - | chr8_2:67701034-67701053 | None:intergenic | 45.0% | |
| CATAGGTGTATCGCAGTTTG+AGG | - | chr8_2:67701447-67701466 | None:intergenic | 45.0% | |
| !! | CAATTTCTAGGATCACAGCC+TGG | - | chr8_2:67701630-67701649 | None:intergenic | 45.0% |
| CAGGCTGTGATCCTAGAAAT+TGG | + | chr8_2:67701628-67701647 | Msa1264260:intron | 45.0% | |
| GTCATGTTACAATGCCTGAC+AGG | - | chr8_2:67701696-67701715 | None:intergenic | 45.0% | |
| GTCACAAGGAATGCTATACG+TGG | + | chr8_2:67701785-67701804 | Msa1264260:CDS | 45.0% | |
| AGTGACAACTCAGACAGACA+AGG | - | chr8_2:67700424-67700443 | None:intergenic | 45.0% | |
| TAGACACGGAGAGTAGTCTT+TGG | + | chr8_2:67700946-67700965 | Msa1264260:intron | 45.0% | |
| CTACCTCCCTTGAGTAATGA+AGG | - | chr8_2:67700975-67700994 | None:intergenic | 45.0% | |
| CTCACCATCATAAGCACAGA+AGG | - | chr8_2:67701034-67701053 | None:intergenic | 45.0% | |
| CATAGGTGTATCGCAGTTTG+AGG | - | chr8_2:67701447-67701466 | None:intergenic | 45.0% | |
| !! | CAATTTCTAGGATCACAGCC+TGG | - | chr8_2:67701630-67701649 | None:intergenic | 45.0% |
| CAGGCTGTGATCCTAGAAAT+TGG | + | chr8_2:67701628-67701647 | Msa1264260:intron | 45.0% | |
| GTCATGTTACAATGCCTGAC+AGG | - | chr8_2:67701696-67701715 | None:intergenic | 45.0% | |
| GTCACAAGGAATGCTATACG+TGG | + | chr8_2:67701785-67701804 | Msa1264260:CDS | 45.0% | |
| !! | TTGAGGGAAGCATTCATCCC+AGG | + | chr8_2:67700290-67700309 | Msa1264260:CDS | 50.0% |
| GGAAAGTCAGAATAGTGCGG+TGG | + | chr8_2:67700630-67700649 | Msa1264260:intron | 50.0% | |
| CTACTCTCCGTGTCTAGCAA+TGG | - | chr8_2:67700942-67700961 | None:intergenic | 50.0% | |
| TTGGCGCCCTTCATTACTCA+AGG | + | chr8_2:67700965-67700984 | Msa1264260:intron | 50.0% | |
| TGGCGCCCTTCATTACTCAA+GGG | + | chr8_2:67700966-67700985 | Msa1264260:intron | 50.0% | |
| !! | TTGAGGGAAGCATTCATCCC+AGG | + | chr8_2:67700290-67700309 | Msa1264260:CDS | 50.0% |
| GGAAAGTCAGAATAGTGCGG+TGG | + | chr8_2:67700630-67700649 | Msa1264260:intron | 50.0% | |
| CTACTCTCCGTGTCTAGCAA+TGG | - | chr8_2:67700942-67700961 | None:intergenic | 50.0% | |
| TTGGCGCCCTTCATTACTCA+AGG | + | chr8_2:67700965-67700984 | Msa1264260:intron | 50.0% | |
| TGGCGCCCTTCATTACTCAA+GGG | + | chr8_2:67700966-67700985 | Msa1264260:intron | 50.0% | |
| CGCCCTTCATTACTCAAGGG+AGG | + | chr8_2:67700969-67700988 | Msa1264260:intron | 55.0% | |
| CGCCCTTCATTACTCAAGGG+AGG | + | chr8_2:67700969-67700988 | Msa1264260:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 67700233 | 67701838 | 67700233 | ID=Msa1264260;Name=Msa1264260 |
| chr8_2 | mRNA | 67700233 | 67701838 | 67700233 | ID=Msa1264260-mRNA-1;Parent=Msa1264260;Name=Msa1264260-mRNA-1;_AED=0.57;_eAED=0.76;_QI=0|0|0|0.66|0|0|3|0|69 |
| chr8_2 | exon | 67700233 | 67700327 | 67700233 | ID=Msa1264260-mRNA-1:exon:22340;Parent=Msa1264260-mRNA-1 |
| chr8_2 | exon | 67701428 | 67701465 | 67701428 | ID=Msa1264260-mRNA-1:exon:22341;Parent=Msa1264260-mRNA-1 |
| chr8_2 | exon | 67701762 | 67701838 | 67701762 | ID=Msa1264260-mRNA-1:exon:22342;Parent=Msa1264260-mRNA-1 |
| chr8_2 | CDS | 67700233 | 67700327 | 67700233 | ID=Msa1264260-mRNA-1:cds;Parent=Msa1264260-mRNA-1 |
| chr8_2 | CDS | 67701428 | 67701465 | 67701428 | ID=Msa1264260-mRNA-1:cds;Parent=Msa1264260-mRNA-1 |
| chr8_2 | CDS | 67701762 | 67701838 | 67701762 | ID=Msa1264260-mRNA-1:cds;Parent=Msa1264260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
