AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0814250


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0814250 MtrunA17_Chr5g0432431 94.815 135 7 0 1 135 1 135 1.49e-91 261
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0814250 AT2G30330.1 60.526 114 45 0 22 135 37 150 5.43e-47 149
Msa0814250 AT2G30330.2 49.020 102 51 1 22 123 37 137 3.68e-29 103

Find 27 sgRNAs with CRISPR-Local

Find 160 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGATGATGAATGTGAATT+AGG 0.250869 5_3:+46172594 None:intergenic
TGTTTGAACTCACAGGAAAT+TGG 0.285667 5_3:-46169935 Msa0814250:intron
TATTTATTAGTGATTAGTTT+TGG 0.338331 5_3:-46169526 Msa0814250:three_prime_UTR
TGTAGCACTGGTTGTTGATT+TGG 0.339031 5_3:-46169607 Msa0814250:three_prime_UTR
TAAGTATATTTGACAAATCA+TGG 0.376425 5_3:-46169582 Msa0814250:three_prime_UTR
AAGAAAAGCAGAACGCGTTT+CGG 0.387718 5_3:-46172522 Msa0814250:CDS
AAATTGGAGACTTTGAGAAT+TGG 0.394379 5_3:-46169919 Msa0814250:CDS
ACGCGTTTCGGATCTGTTAG+TGG 0.417704 5_3:-46172510 Msa0814250:CDS
TTGAACTTAGATACTCTGTT+TGG 0.427526 5_3:-46172700 Msa0814250:five_prime_UTR
TTCACCAAGAGTGATCTTGC+AGG 0.439554 5_3:-46169844 Msa0814250:exon
TGAGAATTGGATGAAGATCA+TGG 0.464193 5_3:-46169906 Msa0814250:CDS
TTGTAAATGATGAATATGAT+TGG 0.472448 5_3:-46169640 Msa0814250:three_prime_UTR
TGCGAGGTTCGTGAAGCAAA+CGG 0.483245 5_3:-46172405 Msa0814250:CDS
TTGTTTCTCAACAAAATAAG+TGG 0.484512 5_3:-46169712 Msa0814250:three_prime_UTR
TTCTCTTAACACTGCTCTCA+AGG 0.509830 5_3:-46172360 Msa0814250:intron
AATACAAAGAAACAAGTGAA+TGG 0.531661 5_3:-46172675 Msa0814250:exon
ACACGCAGAATCAAAGGGAT+TGG 0.536514 5_3:-46172633 Msa0814250:CDS
GCAACCTGCAAGATCACTCT+TGG 0.544451 5_3:+46169840 None:intergenic
TAACACACACGCAGAATCAA+AGG 0.552685 5_3:-46172639 Msa0814250:CDS
GGCATCTGATAATGTAGCAC+TGG 0.553243 5_3:-46169619 Msa0814250:three_prime_UTR
TGTTTCTCAACAAAATAAGT+GGG 0.555171 5_3:-46169711 Msa0814250:three_prime_UTR
AACACACACGCAGAATCAAA+GGG 0.575682 5_3:-46172638 Msa0814250:CDS
CTCTTGCTGTTACTATTGCG+AGG 0.580184 5_3:-46172421 Msa0814250:CDS
ACATTCAGAATAAAGATACA+AGG 0.582849 5_3:+46169673 None:intergenic
CTGTTAGTGGAAGCAGTGAA+TGG 0.587369 5_3:-46172497 Msa0814250:CDS
TCGTGAAGCAAACGGATCAG+TGG 0.626929 5_3:-46172397 Msa0814250:CDS
TTAGTGGAAGCAGTGAATGG+TGG 0.711454 5_3:-46172494 Msa0814250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTAAAATTTTATTAGATAA+AGG - chr5_3:46172490-46172509 Msa0814250:CDS 10.0%
!!! TCTTTTATAAACATATTTTC+AGG - chr5_3:46170617-46170636 Msa0814250:intron 15.0%
!!! ATAAAATTTTACATGATGTT+GGG + chr5_3:46172483-46172502 None:intergenic 15.0%
!!! AATAAAATTTTACATGATGT+TGG + chr5_3:46172484-46172503 None:intergenic 15.0%
!!! TATTTATTAGTGATTAGTTT+TGG - chr5_3:46172700-46172719 Msa0814250:five_prime_UTR 15.0%
!!! CGATTCTAAAAATTTATATC+AGG - chr5_3:46170529-46170548 Msa0814250:intron 20.0%
!!! TATATCAGGATGTTATATTT+TGG - chr5_3:46170543-46170562 Msa0814250:intron 20.0%
!!! TTGATGGTTTAATCTTATTT+TGG + chr5_3:46170982-46171001 None:intergenic 20.0%
!!! AAATGTCACAAAAACAATTT+TGG - chr5_3:46171304-46171323 Msa0814250:intron 20.0%
!! TTTGTAAATGTTTATTCTTG+TGG - chr5_3:46171755-46171774 Msa0814250:intron 20.0%
!! AATAGAAAAATGAATGGAAA+GGG + chr5_3:46172448-46172467 None:intergenic 20.0%
!! TTGTAAATGATGAATATGAT+TGG - chr5_3:46172586-46172605 Msa0814250:CDS 20.0%
!! TAAGTATATTTGACAAATCA+TGG - chr5_3:46172644-46172663 Msa0814250:CDS 20.0%
! AATACAAAGAAACAAGTGAA+TGG - chr5_3:46169551-46169570 Msa0814250:three_prime_UTR 25.0%
!!! TTTGATGATGAATGTGAATT+AGG + chr5_3:46169635-46169654 None:intergenic 25.0%
! TGAATGCAATTAAGAAAACA+AGG + chr5_3:46169933-46169952 None:intergenic 25.0%
!! ACTGATAAGTTAGTTTATAG+CGG - chr5_3:46169994-46170013 Msa0814250:intron 25.0%
!! TCATATGTTACTTAACAAGT+CGG + chr5_3:46170273-46170292 None:intergenic 25.0%
!! AAATAACCGAGTTGAATAAA+AGG - chr5_3:46170461-46170480 Msa0814250:intron 25.0%
!! AATAACCGAGTTGAATAAAA+GGG - chr5_3:46170462-46170481 Msa0814250:intron 25.0%
!! ATTTTCCCTTTTATTCAACT+CGG + chr5_3:46170470-46170489 None:intergenic 25.0%
!!! TAAGCAAGGTTTTTTTTTAG+AGG - chr5_3:46170732-46170751 Msa0814250:intron 25.0%
!!! ACATTCAGGGTTTTAAAAAA+AGG + chr5_3:46170888-46170907 None:intergenic 25.0%
! AATATCTCTTTACACATTCT+CGG + chr5_3:46170924-46170943 None:intergenic 25.0%
! AATTGAGGAATATATGCTTT+AGG + chr5_3:46171053-46171072 None:intergenic 25.0%
! GAAGTCAGATAATAAATTGA+CGG - chr5_3:46171089-46171108 Msa0814250:intron 25.0%
! GAAGAGAAAGTAATAGTTTA+TGG - chr5_3:46171138-46171157 Msa0814250:intron 25.0%
!! TAGTTTATGGACTAAATTGA+TGG - chr5_3:46171151-46171170 Msa0814250:intron 25.0%
! AACAAAAGCAATCATATTTG+AGG + chr5_3:46171232-46171251 None:intergenic 25.0%
!!! TGGTAGTGGATTATTAAATT+GGG + chr5_3:46171377-46171396 None:intergenic 25.0%
!!! TTGGTAGTGGATTATTAAAT+TGG + chr5_3:46171378-46171397 None:intergenic 25.0%
! ATTCCTTCTCCAAAAAAAAT+TGG - chr5_3:46171688-46171707 Msa0814250:intron 25.0%
! CATATGAGCAATAATAAAGA+CGG - chr5_3:46172118-46172137 Msa0814250:intron 25.0%
! TAATCTGTATTAGTCAAGTT+AGG - chr5_3:46172196-46172215 Msa0814250:intron 25.0%
!!! AAAATTTTGTTTGAACTCAC+AGG - chr5_3:46172284-46172303 Msa0814250:intron 25.0%
! GAATAGAAAAATGAATGGAA+AGG + chr5_3:46172449-46172468 None:intergenic 25.0%
!!! TCCATTCATTTTTCTATTCT+AGG - chr5_3:46172450-46172469 Msa0814250:CDS 25.0%
!! TTGTTTCTCAACAAAATAAG+TGG - chr5_3:46172514-46172533 Msa0814250:CDS 25.0%
! TGTTTCTCAACAAAATAAGT+GGG - chr5_3:46172515-46172534 Msa0814250:CDS 25.0%
! ACATTCAGAATAAAGATACA+AGG + chr5_3:46172556-46172575 None:intergenic 25.0%
TTGAACTTAGATACTCTGTT+TGG - chr5_3:46169526-46169545 Msa0814250:three_prime_UTR 30.0%
AATCGTTTATCAGCTTATAG+CGG + chr5_3:46170165-46170184 None:intergenic 30.0%
GCTGATAAACGATTACAAAA+CGG - chr5_3:46170171-46170190 Msa0814250:intron 30.0%
CTGATAAACGATTACAAAAC+GGG - chr5_3:46170172-46170191 Msa0814250:intron 30.0%
! TTTTAGTCAAATCTGCTTAC+AGG - chr5_3:46170199-46170218 Msa0814250:intron 30.0%
!!! TCAGGATGTTATATTTTGGT+TGG - chr5_3:46170547-46170566 Msa0814250:intron 30.0%
!!! CAGGATGTTATATTTTGGTT+GGG - chr5_3:46170548-46170567 Msa0814250:intron 30.0%
ATAACTGACATGTAAAGTGA+GGG - chr5_3:46170587-46170606 Msa0814250:intron 30.0%
GATTGAACTATGATCGTTAT+CGG + chr5_3:46170760-46170779 None:intergenic 30.0%
TAATTTAGAGGCAAAGTTGA+TGG + chr5_3:46170998-46171017 None:intergenic 30.0%
AAGAGAGAGTGATAATTTAG+AGG + chr5_3:46171010-46171029 None:intergenic 30.0%
! TAATAGCATGGACTAAATTG+AGG + chr5_3:46171068-46171087 None:intergenic 30.0%
TATCTGACTTCTTAATAGCA+TGG + chr5_3:46171080-46171099 None:intergenic 30.0%
TGACGGAATTCATATACTTT+AGG - chr5_3:46171106-46171125 Msa0814250:intron 30.0%
GTGAATTTCATCTAGAAAGA+TGG - chr5_3:46171264-46171283 Msa0814250:intron 30.0%
CCAATGATTCCACAATATAA+AGG + chr5_3:46171528-46171547 None:intergenic 30.0%
CCTTTATATTGTGGAATCAT+TGG - chr5_3:46171525-46171544 Msa0814250:intron 30.0%
!!! CAACCAATTTTTTTTGGAGA+AGG + chr5_3:46171694-46171713 None:intergenic 30.0%
!!! CCATCACAACCAATTTTTTT+TGG + chr5_3:46171700-46171719 None:intergenic 30.0%
CCAAAAAAAATTGGTTGTGA+TGG - chr5_3:46171697-46171716 Msa0814250:intron 30.0%
ATTCACCAATAACCCAAAAA+TGG + chr5_3:46171731-46171750 None:intergenic 30.0%
!! TTGTGGTTTGTTCCAAATTA+TGG - chr5_3:46171772-46171791 Msa0814250:intron 30.0%
CTTTATTGTGCACCATAATT+TGG + chr5_3:46171787-46171806 None:intergenic 30.0%
CATTAACATGAACATGTACA+AGG + chr5_3:46171962-46171981 None:intergenic 30.0%
TGTTCATGTTAATGTGCTTA+AGG - chr5_3:46171968-46171987 Msa0814250:intron 30.0%
TTAAGGTCGTTAAAGATTCA+AGG - chr5_3:46171985-46172004 Msa0814250:intron 30.0%
! AAATTGGAGACTTTGAGAAT+TGG - chr5_3:46172307-46172326 Msa0814250:intron 30.0%
GCCTAGAATAGAAAAATGAA+TGG + chr5_3:46172454-46172473 None:intergenic 30.0%
!!! TGCATCTTTCTTCGCTTTTT+CGG + chr5_3:46169682-46169701 None:intergenic 35.0%
CTGATTGAATTTGCAGTGTT+TGG - chr5_3:46170056-46170075 Msa0814250:intron 35.0%
!! GTTACTTAACAAGTCGGTTT+TGG + chr5_3:46170267-46170286 None:intergenic 35.0%
CTTGCTTCAACAAAATTGCA+AGG - chr5_3:46170496-46170515 Msa0814250:intron 35.0%
CATAACTGACATGTAAAGTG+AGG - chr5_3:46170586-46170605 Msa0814250:intron 35.0%
!! GTTCTAAAATAGCAGTTGTG+TGG - chr5_3:46170688-46170707 Msa0814250:intron 35.0%
GTTGTGTGGATCTAATGTAT+TGG - chr5_3:46170702-46170721 Msa0814250:intron 35.0%
CTTGATCTTCTGCAATATCA+AGG + chr5_3:46170782-46170801 None:intergenic 35.0%
AGATTAAATGCACTTGACGT+AGG - chr5_3:46170800-46170819 Msa0814250:intron 35.0%
AAGGTTTGCAATCCTAATCT+CGG + chr5_3:46170869-46170888 None:intergenic 35.0%
ACCTAACACACTTACATTCA+GGG + chr5_3:46170901-46170920 None:intergenic 35.0%
TTCCAAAAATAAATTCCCCG+AGG - chr5_3:46171178-46171197 Msa0814250:intron 35.0%
TATAGTGTTGCAATTGGTAG+TGG + chr5_3:46171391-46171410 None:intergenic 35.0%
CATCAGTATAGTGTTGCAAT+TGG + chr5_3:46171397-46171416 None:intergenic 35.0%
TGATGTTGATCTGACATAAG+CGG - chr5_3:46171412-46171431 Msa0814250:intron 35.0%
!!! TCCATCCTTTTGGAATCTAT+GGG - chr5_3:46171466-46171485 Msa0814250:intron 35.0%
GGTCACAATCCTTTATATTG+TGG - chr5_3:46171516-46171535 Msa0814250:intron 35.0%
ACATAACATACTTCCATTCG+GGG + chr5_3:46171619-46171638 None:intergenic 35.0%
GACATAACATACTTCCATTC+GGG + chr5_3:46171620-46171639 None:intergenic 35.0%
GGACATAACATACTTCCATT+CGG + chr5_3:46171621-46171640 None:intergenic 35.0%
TATCTCTCTACACATTCTCT+CGG + chr5_3:46171642-46171661 None:intergenic 35.0%
TTGGAGAAGGAATCTAACAA+TGG + chr5_3:46171681-46171700 None:intergenic 35.0%
!!! ATGGTTGTCATGCCATTTTT+GGG - chr5_3:46171716-46171735 Msa0814250:intron 35.0%
!!! TCATGCCATTTTTGGGTTAT+TGG - chr5_3:46171723-46171742 Msa0814250:intron 35.0%
TAAAGATTCAAGGATGATGC+AGG - chr5_3:46171995-46172014 Msa0814250:intron 35.0%
AGGAGTTTGGTTGTTGAAAT+AGG - chr5_3:46172015-46172034 Msa0814250:intron 35.0%
TGAAATAGGCATCAATCTTG+TGG - chr5_3:46172029-46172048 Msa0814250:intron 35.0%
GCAATAATAAAGACGGAGAT+AGG - chr5_3:46172125-46172144 Msa0814250:intron 35.0%
TGTTTGAACTCACAGGAAAT+TGG - chr5_3:46172291-46172310 Msa0814250:intron 35.0%
TGAGAATTGGATGAAGATCA+TGG - chr5_3:46172320-46172339 Msa0814250:intron 35.0%
TAACACACACGCAGAATCAA+AGG - chr5_3:46169587-46169606 Msa0814250:three_prime_UTR 40.0%
AACACACACGCAGAATCAAA+GGG - chr5_3:46169588-46169607 Msa0814250:three_prime_UTR 40.0%
!!! CTTCGCTTTTTCGGTTTGAT+TGG + chr5_3:46169673-46169692 None:intergenic 40.0%
AAGAAAAGCAGAACGCGTTT+CGG - chr5_3:46169704-46169723 Msa0814250:three_prime_UTR 40.0%
TTCTCTTAACACTGCTCTCA+AGG - chr5_3:46169866-46169885 Msa0814250:CDS 40.0%
!! TATAGCGGATGAGCTTATAG+AGG - chr5_3:46170009-46170028 Msa0814250:intron 40.0%
ACGTCTACAACTGGATGTTT+GGG - chr5_3:46170322-46170341 Msa0814250:intron 40.0%
! GTATTGGTCTAGTCTAAGCA+AGG - chr5_3:46170718-46170737 Msa0814250:intron 40.0%
ACCCTGAATGTAAGTGTGTT+AGG - chr5_3:46170897-46170916 Msa0814250:intron 40.0%
GACCTAACACACTTACATTC+AGG + chr5_3:46170902-46170921 None:intergenic 40.0%
GGAGAGAGAGAATTTAGCTA+GGG + chr5_3:46170961-46170980 None:intergenic 40.0%
TGGAGAGAGAGAATTTAGCT+AGG + chr5_3:46170962-46170981 None:intergenic 40.0%
!! CTCCTCGGGGAATTTATTTT+TGG + chr5_3:46171183-46171202 None:intergenic 40.0%
CAAAAATAAATTCCCCGAGG+AGG - chr5_3:46171181-46171200 Msa0814250:intron 40.0%
! ATTTGAGGCCAACAAAGCAA+CGG + chr5_3:46171217-46171236 None:intergenic 40.0%
TTTCAGAATGCTCAGAACGT+TGG - chr5_3:46171334-46171353 Msa0814250:intron 40.0%
ATAAGCGGCTTCTTCTTATG+TGG - chr5_3:46171427-46171446 Msa0814250:intron 40.0%
TAAGCGGCTTCTTCTTATGT+GGG - chr5_3:46171428-46171447 Msa0814250:intron 40.0%
!!! CTCCATCCTTTTGGAATCTA+TGG - chr5_3:46171465-46171484 Msa0814250:intron 40.0%
!!! GATGGTTGTCATGCCATTTT+TGG - chr5_3:46171715-46171734 Msa0814250:intron 40.0%
CTCAATCAACTCAAGAAAGC+AGG + chr5_3:46171824-46171843 None:intergenic 40.0%
GGCACACTTACACTGATAAA+TGG - chr5_3:46172050-46172069 Msa0814250:intron 40.0%
!! TGTAGCACTGGTTGTTGATT+TGG - chr5_3:46172619-46172638 Msa0814250:CDS 40.0%
ACACGCAGAATCAAAGGGAT+TGG - chr5_3:46169593-46169612 Msa0814250:three_prime_UTR 45.0%
CTGTTAGTGGAAGCAGTGAA+TGG - chr5_3:46169729-46169748 Msa0814250:three_prime_UTR 45.0%
TTAGTGGAAGCAGTGAATGG+TGG - chr5_3:46169732-46169751 Msa0814250:three_prime_UTR 45.0%
!! CTCTTGCTGTTACTATTGCG+AGG - chr5_3:46169805-46169824 Msa0814250:three_prime_UTR 45.0%
!!! AGTCGGTTTTGGAGTCTGTT+TGG + chr5_3:46170256-46170275 None:intergenic 45.0%
CATCCAGTTGTAGACGTGAA+GGG + chr5_3:46170319-46170338 None:intergenic 45.0%
ACATCCAGTTGTAGACGTGA+AGG + chr5_3:46170320-46170339 None:intergenic 45.0%
CACGTCTACAACTGGATGTT+TGG - chr5_3:46170321-46170340 Msa0814250:intron 45.0%
CGTGAACCGAGTAGTTCAAT+AGG - chr5_3:46170347-46170366 Msa0814250:intron 45.0%
ACGACGCCTATTGAACTACT+CGG + chr5_3:46170356-46170375 None:intergenic 45.0%
! TTCTACTGCCGTTGCTTTGT+TGG - chr5_3:46171206-46171225 Msa0814250:intron 45.0%
CATCTAGAAAGATGGTTGCG+TGG - chr5_3:46171272-46171291 Msa0814250:intron 45.0%
AAGCGGCTTCTTCTTATGTG+GGG - chr5_3:46171429-46171448 Msa0814250:intron 45.0%
CAAAAGGATGGAGAGTCATG+TGG + chr5_3:46171458-46171477 None:intergenic 45.0%
! CACATGACTCTCCATCCTTT+TGG - chr5_3:46171456-46171475 Msa0814250:intron 45.0%
GCCCATAGATTCCAAAAGGA+TGG + chr5_3:46171470-46171489 None:intergenic 45.0%
TCGAGCCCATAGATTCCAAA+AGG + chr5_3:46171474-46171493 None:intergenic 45.0%
TGATCTTGGCTGCAACATCA+TGG + chr5_3:46171567-46171586 None:intergenic 45.0%
TGTGATCGTGATCGTGATCT+TGG + chr5_3:46171581-46171600 None:intergenic 45.0%
!! CCATTCGGGGCTTTAGAAAA+AGG + chr5_3:46171606-46171625 None:intergenic 45.0%
!!! CCTTTTTCTAAAGCCCCGAA+TGG - chr5_3:46171603-46171622 Msa0814250:intron 45.0%
TCAAGGATGATGCAGGAGTT+TGG - chr5_3:46172002-46172021 Msa0814250:intron 45.0%
TTCACCAAGAGTGATCTTGC+AGG - chr5_3:46172382-46172401 Msa0814250:CDS 45.0%
! GGCATCTGATAATGTAGCAC+TGG - chr5_3:46172607-46172626 Msa0814250:CDS 45.0%
!!! ATATTCTAAAAATTTATATT+CGG + chr5_3:46170404-46170423 None:intergenic 5.0%
ACGCGTTTCGGATCTGTTAG+TGG - chr5_3:46169716-46169735 Msa0814250:three_prime_UTR 50.0%
TGCGAGGTTCGTGAAGCAAA+CGG - chr5_3:46169821-46169840 Msa0814250:three_prime_UTR 50.0%
TCGTGAAGCAAACGGATCAG+TGG - chr5_3:46169829-46169848 Msa0814250:three_prime_UTR 50.0%
TAGCCCTTCACGTCTACAAC+TGG - chr5_3:46170313-46170332 Msa0814250:intron 50.0%
CGTAGGCTCGATCACGATTA+TGG - chr5_3:46170817-46170836 Msa0814250:intron 50.0%
TAATCTCGGCTACGACGTCA+TGG + chr5_3:46170855-46170874 None:intergenic 50.0%
ATGACGTCGTAGCCGAGATT+AGG - chr5_3:46170854-46170873 Msa0814250:intron 50.0%
ACGGCAGTAGAAAACCTCCT+CGG + chr5_3:46171198-46171217 None:intergenic 50.0%
AGCGGCTTCTTCTTATGTGG+GGG - chr5_3:46171430-46171449 Msa0814250:intron 50.0%
! AGACCGTGTTGCTACTATCG+CGG - chr5_3:46171495-46171514 Msa0814250:intron 50.0%
TGACCGCGATAGTAGCAACA+CGG + chr5_3:46171501-46171520 None:intergenic 50.0%
GCAACCTGCAAGATCACTCT+TGG + chr5_3:46172389-46172408 None:intergenic 50.0%
GGCAGTAGAAAACCTCCTCG+GGG + chr5_3:46171196-46171215 None:intergenic 55.0%
CGGCAGTAGAAAACCTCCTC+GGG + chr5_3:46171197-46171216 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 46169525 46172723 46169525 ID=Msa0814250;Name=Msa0814250
chr5_3 mRNA 46169525 46172723 46169525 ID=Msa0814250-mRNA-1;Parent=Msa0814250;Name=Msa0814250-mRNA-1;_AED=0.03;_eAED=0.03;_QI=45|1|1|1|1|1|2|328|135
chr5_3 exon 46169525 46169942 46169525 ID=Msa0814250-mRNA-1:exon:14033;Parent=Msa0814250-mRNA-1
chr5_3 exon 46172361 46172723 46172361 ID=Msa0814250-mRNA-1:exon:14032;Parent=Msa0814250-mRNA-1
chr5_3 five_prime_UTR 46172679 46172723 46172679 ID=Msa0814250-mRNA-1:five_prime_utr;Parent=Msa0814250-mRNA-1
chr5_3 CDS 46172361 46172678 46172361 ID=Msa0814250-mRNA-1:cds;Parent=Msa0814250-mRNA-1
chr5_3 CDS 46169853 46169942 46169853 ID=Msa0814250-mRNA-1:cds;Parent=Msa0814250-mRNA-1
chr5_3 three_prime_UTR 46169525 46169852 46169525 ID=Msa0814250-mRNA-1:three_prime_utr;Parent=Msa0814250-mRNA-1
Gene Sequence

>Msa0814250

ATGGAAGAACGCGATGTTAACACACACGCAGAATCAAAGGGATTGGAAGATTCATTACAAAACCTAATTCACATTCATCATCAAAAATCTCTCATTCTCACCAATCAAACCGAAAAAGCGAAGAAAGATGCAATAAGAAAAGCAGAACGCGTTTCGGATCTGTTAGTGGAAGCAGTGAATGGTGGTGTTCAAGATTCGTTTATTTATCAGAAGAGAATTGAGCTTGAAATTCGTGCTCTTGCTGTTACTATTGCGAGGTTCGTGAAGCAAACGGATCAGTGGCTTAATGCTACTCATTCTCTTAACACTGCTCTCAAGGAAATTGGAGACTTTGAGAATTGGATGAAGATCATGGAATACGATTTTAAAAGTATCAATGCAGCTATACACAATATTCACCAAGAGTGA

Protein sequence

>Msa0814250

MEERDVNTHAESKGLEDSLQNLIHIHHQKSLILTNQTEKAKKDAIRKAERVSDLLVEAVNGGVQDSFIYQKRIELEIRALAVTIARFVKQTDQWLNATHSLNTALKEIGDFENWMKIMEYDFKSINAAIHNIHQE*