Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1268440 | sp|Q42564|APX3_ARATH | 66.160 | 263 | 85 | 3 | 1 | 263 | 1 | 259 | 4.44e-122 | 353 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1268440 | G7JXJ2 | 87.368 | 285 | 32 | 2 | 1 | 285 | 1 | 281 | 3.88e-177 | 499 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015150 | Msa1268440 | 0.820987 | 5.128749e-53 | -8.615850e-47 |
| Msa0609300 | Msa1268440 | 0.841572 | 4.379710e-58 | -8.615850e-47 |
| Msa0691910 | Msa1268440 | 0.837225 | 5.894510e-57 | -8.615850e-47 |
| Msa0759010 | Msa1268440 | 0.944011 | 4.256377e-103 | -8.615850e-47 |
| Msa0800140 | Msa1268440 | 0.965851 | 3.829314e-125 | -8.615850e-47 |
| Msa0800170 | Msa1268440 | 0.958670 | 1.324062e-116 | -8.615850e-47 |
| Msa0800200 | Msa1268440 | 0.969855 | 9.694694e-131 | -8.615850e-47 |
| Msa0155180 | Msa1268440 | 0.806395 | 8.400359e-50 | -8.615850e-47 |
| Msa1268380 | Msa1268440 | 0.980652 | 1.023298e-150 | -8.615850e-47 |
| Msa1268410 | Msa1268440 | 0.964293 | 3.816383e-123 | -8.615850e-47 |
| Msa0432320 | Msa1268440 | 0.800520 | 1.386964e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1268440 | MtrunA17_Chr5g0405731 | 87.368 | 285 | 32 | 2 | 1 | 285 | 1 | 281 | 0.0 | 499 |
| Msa1268440 | MtrunA17_Chr4g0037131 | 65.385 | 286 | 84 | 4 | 6 | 283 | 7 | 285 | 8.91e-128 | 365 |
| Msa1268440 | MtrunA17_Chr4g0030171 | 57.317 | 246 | 96 | 3 | 6 | 248 | 8 | 247 | 6.45e-95 | 280 |
| Msa1268440 | MtrunA17_Chr3g0124821 | 44.444 | 261 | 122 | 5 | 13 | 250 | 100 | 360 | 8.80e-66 | 210 |
| Msa1268440 | MtrunA17_Chr3g0137751 | 32.794 | 247 | 138 | 8 | 11 | 247 | 86 | 314 | 7.32e-28 | 109 |
| Msa1268440 | MtrunA17_Chr5g0426581 | 44.706 | 85 | 41 | 1 | 27 | 105 | 113 | 197 | 1.27e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1268440 | AT4G35000.1 | 66.160 | 263 | 85 | 3 | 1 | 263 | 1 | 259 | 4.51e-123 | 353 |
| Msa1268440 | AT4G35970.1 | 61.511 | 278 | 102 | 2 | 6 | 283 | 5 | 277 | 5.43e-120 | 345 |
| Msa1268440 | AT4G35970.2 | 65.315 | 222 | 72 | 2 | 6 | 227 | 5 | 221 | 2.16e-100 | 293 |
| Msa1268440 | AT3G09640.2 | 56.327 | 245 | 99 | 2 | 6 | 248 | 9 | 247 | 2.95e-91 | 271 |
| Msa1268440 | AT3G09640.1 | 56.327 | 245 | 99 | 2 | 6 | 248 | 9 | 247 | 2.95e-91 | 271 |
| Msa1268440 | AT1G07890.2 | 53.279 | 244 | 109 | 4 | 6 | 248 | 8 | 247 | 7.54e-86 | 257 |
| Msa1268440 | AT1G07890.8 | 53.279 | 244 | 109 | 4 | 6 | 248 | 8 | 247 | 7.54e-86 | 257 |
| Msa1268440 | AT1G07890.4 | 53.279 | 244 | 109 | 4 | 6 | 248 | 8 | 247 | 7.54e-86 | 257 |
| Msa1268440 | AT1G07890.7 | 53.279 | 244 | 109 | 4 | 6 | 248 | 8 | 247 | 7.54e-86 | 257 |
| Msa1268440 | AT1G07890.1 | 53.279 | 244 | 109 | 4 | 6 | 248 | 8 | 247 | 7.54e-86 | 257 |
| Msa1268440 | AT1G07890.3 | 53.279 | 244 | 109 | 4 | 6 | 248 | 8 | 247 | 7.54e-86 | 257 |
| Msa1268440 | AT1G07890.5 | 53.279 | 244 | 109 | 4 | 6 | 248 | 8 | 247 | 7.54e-86 | 257 |
| Msa1268440 | AT1G07890.6 | 52.869 | 244 | 110 | 4 | 6 | 248 | 8 | 247 | 2.73e-85 | 256 |
| Msa1268440 | AT4G08390.3 | 43.382 | 272 | 109 | 6 | 13 | 250 | 105 | 365 | 4.01e-66 | 211 |
| Msa1268440 | AT4G08390.2 | 43.382 | 272 | 109 | 6 | 13 | 250 | 106 | 366 | 4.49e-66 | 211 |
| Msa1268440 | AT4G08390.5 | 43.382 | 272 | 109 | 6 | 13 | 250 | 106 | 366 | 4.49e-66 | 211 |
| Msa1268440 | AT4G08390.1 | 43.382 | 272 | 109 | 6 | 13 | 250 | 106 | 366 | 4.49e-66 | 211 |
| Msa1268440 | AT1G77490.2 | 44.118 | 272 | 107 | 7 | 13 | 250 | 85 | 345 | 1.22e-64 | 208 |
| Msa1268440 | AT1G77490.1 | 44.118 | 272 | 107 | 7 | 13 | 250 | 85 | 345 | 1.62e-64 | 208 |
| Msa1268440 | AT4G08390.4 | 39.338 | 272 | 94 | 7 | 13 | 250 | 106 | 340 | 4.77e-53 | 176 |
| Msa1268440 | AT4G32320.1 | 31.667 | 240 | 136 | 9 | 18 | 247 | 102 | 323 | 5.06e-25 | 102 |
| Msa1268440 | AT4G09010.2 | 49.383 | 81 | 35 | 1 | 32 | 106 | 49 | 129 | 1.40e-14 | 72.8 |
| Msa1268440 | AT4G09010.1 | 49.383 | 81 | 35 | 1 | 32 | 106 | 114 | 194 | 2.68e-14 | 72.4 |
| Msa1268440 | AT4G09010.3 | 49.383 | 81 | 35 | 1 | 32 | 106 | 161 | 241 | 5.79e-14 | 72.0 |
Find 71 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAGGGAACTAATGAAAT+TGG | 0.251753 | 8_3:-1436724 | Msa1268440:intron |
| TGCCTCAACTGTTGTGATCC+TGG | 0.267857 | 8_3:-1436364 | Msa1268440:CDS |
| TAACCAAAGCCTTGCAAGTA+TGG | 0.276478 | 8_3:-1438308 | Msa1268440:exon |
| CATGATTTAATTACCTTGTT+TGG | 0.286806 | 8_3:+1437166 | None:intergenic |
| CACAAGAAACTCTCTGAATT+AGG | 0.339734 | 8_3:-1436447 | Msa1268440:CDS |
| ATGTACTAGTACCTTTCTTC+CGG | 0.351786 | 8_3:+1437351 | None:intergenic |
| TAGCCATACTTGCAAGGCTT+TGG | 0.388173 | 8_3:+1438305 | None:intergenic |
| CCAACTATTCACTTTGTTCC+CGG | 0.389997 | 8_3:-1437370 | Msa1268440:CDS |
| AGGTCCGCATATGAAACTTT+GGG | 0.390870 | 8_3:+1437831 | None:intergenic |
| TTATATGTATTTCAGCTAGC+TGG | 0.393811 | 8_3:-1437420 | Msa1268440:intron |
| TAATTACCTTGTTTGGCATC+TGG | 0.400655 | 8_3:+1437173 | None:intergenic |
| TGATTCCTTATAGAACCATT+TGG | 0.401526 | 8_3:+1438045 | None:intergenic |
| TTGTGGCTGTAGAGGTCACT+AGG | 0.412391 | 8_3:-1437395 | Msa1268440:CDS |
| GCCTCAACTGTTGTGATCCT+GGG | 0.428816 | 8_3:-1436363 | Msa1268440:CDS |
| AAAGATCGCTCTAACTTTGA+AGG | 0.430021 | 8_3:-1436870 | Msa1268440:CDS |
| AAGGTCCGCATATGAAACTT+TGG | 0.433809 | 8_3:+1437830 | None:intergenic |
| TGTACTAGTACCTTTCTTCC+GGG | 0.435662 | 8_3:+1437352 | None:intergenic |
| TGGCAGTTATCGTTCTCAAT+TGG | 0.438208 | 8_3:-1436412 | Msa1268440:CDS |
| CATAGAGTTCAACATATTTG+CGG | 0.439517 | 8_3:+1436643 | None:intergenic |
| TCAACATATTTGCGGAATGC+AGG | 0.460562 | 8_3:+1436651 | None:intergenic |
| TCACTTTGTTCCCGGAAGAA+AGG | 0.460671 | 8_3:-1437362 | Msa1268440:intron |
| TATATGTATTTCAGCTAGCT+GGG | 0.463788 | 8_3:-1437419 | Msa1268440:intron |
| TTGCTTGTTATGATTATGAA+AGG | 0.466835 | 8_3:+1438348 | None:intergenic |
| CAATTGGCTAAGGCAGCGTT+AGG | 0.473147 | 8_3:-1436396 | Msa1268440:CDS |
| AAAACAGCTGTTGAATTATG+TGG | 0.483315 | 8_3:-1437988 | Msa1268440:intron |
| CATATTTAGCCATACTTGCA+AGG | 0.494767 | 8_3:+1438299 | None:intergenic |
| AGCTGGGGTTGTGGCTGTAG+AGG | 0.496133 | 8_3:-1437403 | Msa1268440:CDS |
| GCTCTAACTTTGAAGGTCAA+TGG | 0.497264 | 8_3:-1436863 | Msa1268440:CDS |
| GGGGTCCAAATGGTTCTATA+AGG | 0.497436 | 8_3:-1438050 | Msa1268440:CDS |
| CCGGGAACAAAGTGAATAGT+TGG | 0.498623 | 8_3:+1437370 | None:intergenic |
| GCTGAACCATGCTGCTAACA+AGG | 0.508818 | 8_3:-1438016 | Msa1268440:CDS |
| ATTTCAGCTAGCTGGGGTTG+TGG | 0.511946 | 8_3:-1437412 | Msa1268440:intron |
| ATTATAAAATAACCTGGTAA+AGG | 0.515916 | 8_3:+1437811 | None:intergenic |
| TTCATATGCGGACCTTTACC+AGG | 0.516618 | 8_3:-1437823 | Msa1268440:intron |
| TCTGGAAGGCGACCTTCTTG+TGG | 0.517530 | 8_3:+1437191 | None:intergenic |
| TTGAGAAACAGAGGAAGTGA+AGG | 0.521165 | 8_3:-1437862 | Msa1268440:intron |
| TTTGGTTAATTTCTGAGAGA+GGG | 0.530694 | 8_3:+1438323 | None:intergenic |
| TCAAGCCCTTGTTAGCAGCA+TGG | 0.531740 | 8_3:+1438010 | None:intergenic |
| ATATGTTGAACTCTATGCTA+AGG | 0.543090 | 8_3:-1436637 | Msa1268440:intron |
| TTGTACCAAAGTGTGGCCTC+CGG | 0.545189 | 8_3:+1436999 | None:intergenic |
| AAAGACATTGTAGCTCTCTC+CGG | 0.548124 | 8_3:-1437018 | Msa1268440:CDS |
| CGCCTTCCAGATGCCAAACA+AGG | 0.549529 | 8_3:-1437179 | Msa1268440:CDS |
| TTATCGTTCTCAATTGGCTA+AGG | 0.549693 | 8_3:-1436406 | Msa1268440:CDS |
| TGCTTGTTATGATTATGAAA+GGG | 0.553361 | 8_3:+1438349 | None:intergenic |
| TACCTTGTTTGGCATCTGGA+AGG | 0.559846 | 8_3:+1437177 | None:intergenic |
| CTTTGGTTAATTTCTGAGAG+AGG | 0.565568 | 8_3:+1438322 | None:intergenic |
| AATTAATTTGTACCAAAGTG+TGG | 0.573092 | 8_3:+1436992 | None:intergenic |
| GGCTAAGGCAGCGTTAGGAA+TGG | 0.573545 | 8_3:-1436391 | Msa1268440:CDS |
| TAAGAGTTATCAAACTTGAG+AGG | 0.573775 | 8_3:+1436831 | None:intergenic |
| TGTTATGATTATGAAAGGGT+TGG | 0.578122 | 8_3:+1438353 | None:intergenic |
| ATTTATAGGTGGCATGATGC+TGG | 0.582275 | 8_3:-1438099 | Msa1268440:intron |
| TTGAGAACGATAACTGCCAC+CGG | 0.582999 | 8_3:+1436416 | None:intergenic |
| AAGAGTTATCAAACTTGAGA+GGG | 0.589980 | 8_3:+1436832 | None:intergenic |
| TCTCTCCGGAGGCCACACTT+TGG | 0.591661 | 8_3:-1437004 | Msa1268440:intron |
| TCTGAATTAGGCTTCAATCC+CGG | 0.595170 | 8_3:-1436435 | Msa1268440:CDS |
| TACGCTAATCGTAGCATGAG+AGG | 0.599636 | 8_3:+1438196 | None:intergenic |
| GGTCCGCATATGAAACTTTG+GGG | 0.601066 | 8_3:+1437832 | None:intergenic |
| TGTGGCTGTAGAGGTCACTA+GGG | 0.606797 | 8_3:-1437394 | Msa1268440:CDS |
| TCAACTAGAGCCTTGTCTGT+AGG | 0.607702 | 8_3:+1436678 | None:intergenic |
| ATTGAAGCTTCCTACAGACA+AGG | 0.615401 | 8_3:-1436688 | Msa1268440:CDS |
| CTGAACCATGCTGCTAACAA+GGG | 0.615953 | 8_3:-1438015 | Msa1268440:CDS |
| GACATTGTAGCTCTCTCCGG+AGG | 0.618468 | 8_3:-1437015 | Msa1268440:CDS |
| TCATTGGAATCTCCACAAGA+AGG | 0.637304 | 8_3:-1437203 | Msa1268440:CDS |
| ACCCAGGATCACAACAGTTG+AGG | 0.637431 | 8_3:+1436362 | None:intergenic |
| ATATGTATTTCAGCTAGCTG+GGG | 0.644095 | 8_3:-1437418 | Msa1268440:intron |
| TGAGCTCAAGTAAGTAACCC+AGG | 0.647120 | 8_3:+1436346 | None:intergenic |
| AGAGTATGTTAAAGAAATCG+AGG | 0.648519 | 8_3:-1438266 | Msa1268440:CDS |
| ACACCCCAAAGTTTCATATG+CGG | 0.685445 | 8_3:-1437835 | Msa1268440:CDS |
| TGAGAACGATAACTGCCACC+GGG | 0.688112 | 8_3:+1436417 | None:intergenic |
| GAATTAGGCTTCAATCCCGG+TGG | 0.713172 | 8_3:-1436432 | Msa1268440:CDS |
| GTATGTTAAAGAAATCGAGG+AGG | 0.749911 | 8_3:-1438263 | Msa1268440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATATAGTATGATTTAT+AGG | - | chr8_3:1436411-1436430 | Msa1268440:CDS | 10.0% |
| !! | AAAAATATTATAAAATAACC+TGG | + | chr8_3:1436722-1436741 | None:intergenic | 10.0% |
| !! | TAATATATAGTATGATTTAT+AGG | - | chr8_3:1436411-1436430 | Msa1268440:CDS | 10.0% |
| !! | AAAAATATTATAAAATAACC+TGG | + | chr8_3:1436722-1436741 | None:intergenic | 10.0% |
| !! | TATGTATATGTTATAGTAAA+AGG | + | chr8_3:1436384-1436403 | None:intergenic | 15.0% |
| !! | TAAGATTAATAAGCAAAAAT+TGG | + | chr8_3:1436621-1436640 | None:intergenic | 15.0% |
| !!! | TTAATTCATATTCAATTTTG+TGG | + | chr8_3:1436975-1436994 | None:intergenic | 15.0% |
| !! | ATTAATCATGTGTAAAAATA+TGG | + | chr8_3:1437025-1437044 | None:intergenic | 15.0% |
| !!! | TATTTTTACACATGATTAAT+CGG | - | chr8_3:1437025-1437044 | Msa1268440:CDS | 15.0% |
| !! | ATTATTATAGTAGTATTATG+AGG | - | chr8_3:1437277-1437296 | Msa1268440:intron | 15.0% |
| !! | TGTATAAAAAACTATATTTC+AGG | - | chr8_3:1437437-1437456 | Msa1268440:intron | 15.0% |
| !! | TTCTTCAAGAAATATAATAA+AGG | + | chr8_3:1437583-1437602 | None:intergenic | 15.0% |
| !!! | GTTCTCTATTTTTTTTTTTT+TGG | - | chr8_3:1437936-1437955 | Msa1268440:intron | 15.0% |
| !!! | ATAGTATTATGTATTTTTTG+TGG | - | chr8_3:1437992-1438011 | Msa1268440:CDS | 15.0% |
| !!! | TAATGATTTTGAATTTTACT+AGG | - | chr8_3:1438019-1438038 | Msa1268440:CDS | 15.0% |
| !! | TATGTATATGTTATAGTAAA+AGG | + | chr8_3:1436384-1436403 | None:intergenic | 15.0% |
| !! | TAAGATTAATAAGCAAAAAT+TGG | + | chr8_3:1436621-1436640 | None:intergenic | 15.0% |
| !!! | TTAATTCATATTCAATTTTG+TGG | + | chr8_3:1436975-1436994 | None:intergenic | 15.0% |
| !! | ATTAATCATGTGTAAAAATA+TGG | + | chr8_3:1437025-1437044 | None:intergenic | 15.0% |
| !!! | TATTTTTACACATGATTAAT+CGG | - | chr8_3:1437025-1437044 | Msa1268440:CDS | 15.0% |
| !! | ATTATTATAGTAGTATTATG+AGG | - | chr8_3:1437277-1437296 | Msa1268440:intron | 15.0% |
| !! | TGTATAAAAAACTATATTTC+AGG | - | chr8_3:1437437-1437456 | Msa1268440:intron | 15.0% |
| !! | TTCTTCAAGAAATATAATAA+AGG | + | chr8_3:1437583-1437602 | None:intergenic | 15.0% |
| !!! | GTTCTCTATTTTTTTTTTTT+TGG | - | chr8_3:1437936-1437955 | Msa1268440:intron | 15.0% |
| !!! | ATAGTATTATGTATTTTTTG+TGG | - | chr8_3:1437992-1438011 | Msa1268440:CDS | 15.0% |
| !!! | TAATGATTTTGAATTTTACT+AGG | - | chr8_3:1438019-1438038 | Msa1268440:CDS | 15.0% |
| !! | TATATAGTATGATTTATAGG+TGG | - | chr8_3:1436414-1436433 | Msa1268440:CDS | 20.0% |
| !! | ATTATAAAATAACCTGGTAA+AGG | + | chr8_3:1436716-1436735 | None:intergenic | 20.0% |
| !! | AATTCACTTGAATAAATGAT+TGG | - | chr8_3:1436872-1436891 | Msa1268440:CDS | 20.0% |
| !! | CTAGATTAAGTTAAAGATTA+TGG | - | chr8_3:1436900-1436919 | Msa1268440:intron | 20.0% |
| !!! | TATTTTGAATTAGGATTCAT+TGG | - | chr8_3:1437305-1437324 | Msa1268440:intron | 20.0% |
| !! | TCATTCATTTCAATTGATAA+GGG | - | chr8_3:1437621-1437640 | Msa1268440:intron | 20.0% |
| !! | AATACAAGATTAACATAAAC+AGG | - | chr8_3:1437784-1437803 | Msa1268440:intron | 20.0% |
| !! | ATACAAGATTAACATAAACA+GGG | - | chr8_3:1437785-1437804 | Msa1268440:intron | 20.0% |
| !! | TATATAGTATGATTTATAGG+TGG | - | chr8_3:1436414-1436433 | Msa1268440:CDS | 20.0% |
| !! | ATTATAAAATAACCTGGTAA+AGG | + | chr8_3:1436716-1436735 | None:intergenic | 20.0% |
| !! | AATTCACTTGAATAAATGAT+TGG | - | chr8_3:1436872-1436891 | Msa1268440:CDS | 20.0% |
| !! | CTAGATTAAGTTAAAGATTA+TGG | - | chr8_3:1436900-1436919 | Msa1268440:intron | 20.0% |
| !!! | TATTTTGAATTAGGATTCAT+TGG | - | chr8_3:1437305-1437324 | Msa1268440:intron | 20.0% |
| !! | TCATTCATTTCAATTGATAA+GGG | - | chr8_3:1437621-1437640 | Msa1268440:intron | 20.0% |
| !! | AATACAAGATTAACATAAAC+AGG | - | chr8_3:1437784-1437803 | Msa1268440:intron | 20.0% |
| !! | ATACAAGATTAACATAAACA+GGG | - | chr8_3:1437785-1437804 | Msa1268440:intron | 20.0% |
| !!! | TGCTTGTTATGATTATGAAA+GGG | + | chr8_3:1436178-1436197 | None:intergenic | 25.0% |
| !!! | TTGCTTGTTATGATTATGAA+AGG | + | chr8_3:1436179-1436198 | None:intergenic | 25.0% |
| !!! | TTTTTTGTTTTGAGAAACAG+AGG | - | chr8_3:1436653-1436672 | Msa1268440:CDS | 25.0% |
| ! | ATAATCAAGATATTAACGTG+TGG | - | chr8_3:1436755-1436774 | Msa1268440:intron | 25.0% |
| ! | TTATGTACAAAAATGTTTCG+TGG | - | chr8_3:1436793-1436812 | Msa1268440:intron | 25.0% |
| ! | CATAATCAACTGCAAAAATA+TGG | - | chr8_3:1436847-1436866 | Msa1268440:CDS | 25.0% |
| ! | TAGATTGTTACTAAATCATG+AGG | + | chr8_3:1437247-1437266 | None:intergenic | 25.0% |
| !!! | GAGGTGTTTTATTTTGAATT+AGG | - | chr8_3:1437296-1437315 | Msa1268440:intron | 25.0% |
| ! | CATGATTTAATTACCTTGTT+TGG | + | chr8_3:1437361-1437380 | None:intergenic | 25.0% |
| !!! | AATTAATTTGTACCAAAGTG+TGG | + | chr8_3:1437535-1437554 | None:intergenic | 25.0% |
| ! | AGTGTTTGAATTATTATGGT+TGG | + | chr8_3:1437559-1437578 | None:intergenic | 25.0% |
| !!! | AGGAAGTGTTTGAATTATTA+TGG | + | chr8_3:1437563-1437582 | None:intergenic | 25.0% |
| ! | CTCATTCATTTCAATTGATA+AGG | - | chr8_3:1437620-1437639 | Msa1268440:intron | 25.0% |
| !!! | CATGATGATATGTTTTTATG+AGG | + | chr8_3:1438293-1438312 | None:intergenic | 25.0% |
| !!! | TGCTTGTTATGATTATGAAA+GGG | + | chr8_3:1436178-1436197 | None:intergenic | 25.0% |
| !!! | TTGCTTGTTATGATTATGAA+AGG | + | chr8_3:1436179-1436198 | None:intergenic | 25.0% |
| !!! | TTTTTTGTTTTGAGAAACAG+AGG | - | chr8_3:1436653-1436672 | Msa1268440:CDS | 25.0% |
| ! | ATAATCAAGATATTAACGTG+TGG | - | chr8_3:1436755-1436774 | Msa1268440:intron | 25.0% |
| ! | TTATGTACAAAAATGTTTCG+TGG | - | chr8_3:1436793-1436812 | Msa1268440:intron | 25.0% |
| ! | CATAATCAACTGCAAAAATA+TGG | - | chr8_3:1436847-1436866 | Msa1268440:CDS | 25.0% |
| ! | TAGATTGTTACTAAATCATG+AGG | + | chr8_3:1437247-1437266 | None:intergenic | 25.0% |
| !!! | GAGGTGTTTTATTTTGAATT+AGG | - | chr8_3:1437296-1437315 | Msa1268440:intron | 25.0% |
| ! | CATGATTTAATTACCTTGTT+TGG | + | chr8_3:1437361-1437380 | None:intergenic | 25.0% |
| !!! | AATTAATTTGTACCAAAGTG+TGG | + | chr8_3:1437535-1437554 | None:intergenic | 25.0% |
| ! | AGTGTTTGAATTATTATGGT+TGG | + | chr8_3:1437559-1437578 | None:intergenic | 25.0% |
| !!! | AGGAAGTGTTTGAATTATTA+TGG | + | chr8_3:1437563-1437582 | None:intergenic | 25.0% |
| ! | CTCATTCATTTCAATTGATA+AGG | - | chr8_3:1437620-1437639 | Msa1268440:intron | 25.0% |
| !!! | CATGATGATATGTTTTTATG+AGG | + | chr8_3:1438293-1438312 | None:intergenic | 25.0% |
| TGTTATGATTATGAAAGGGT+TGG | + | chr8_3:1436174-1436193 | None:intergenic | 30.0% | |
| ! | TTTGGTTAATTTCTGAGAGA+GGG | + | chr8_3:1436204-1436223 | None:intergenic | 30.0% |
| AGAGTATGTTAAAGAAATCG+AGG | - | chr8_3:1436258-1436277 | Msa1268440:three_prime_UTR | 30.0% | |
| TGATTCCTTATAGAACCATT+TGG | + | chr8_3:1436482-1436501 | None:intergenic | 30.0% | |
| AAAACAGCTGTTGAATTATG+TGG | - | chr8_3:1436536-1436555 | Msa1268440:intron | 30.0% | |
| !!! | CATGTAGTTTGTTTTGTCAA+AGG | - | chr8_3:1436928-1436947 | Msa1268440:intron | 30.0% |
| TTATATGTATTTCAGCTAGC+TGG | - | chr8_3:1437104-1437123 | Msa1268440:intron | 30.0% | |
| TATATGTATTTCAGCTAGCT+GGG | - | chr8_3:1437105-1437124 | Msa1268440:intron | 30.0% | |
| CATTTCAATTGATAAGGGTA+AGG | - | chr8_3:1437626-1437645 | Msa1268440:intron | 30.0% | |
| AAGAGTTATCAAACTTGAGA+GGG | + | chr8_3:1437695-1437714 | None:intergenic | 30.0% | |
| TAAGAGTTATCAAACTTGAG+AGG | + | chr8_3:1437696-1437715 | None:intergenic | 30.0% | |
| AAACAGGGAACTAATGAAAT+TGG | - | chr8_3:1437800-1437819 | Msa1268440:intron | 30.0% | |
| CATAGAGTTCAACATATTTG+CGG | + | chr8_3:1437884-1437903 | None:intergenic | 30.0% | |
| ATATGTTGAACTCTATGCTA+AGG | - | chr8_3:1437887-1437906 | Msa1268440:intron | 30.0% | |
| TGTTATGATTATGAAAGGGT+TGG | + | chr8_3:1436174-1436193 | None:intergenic | 30.0% | |
| ! | TTTGGTTAATTTCTGAGAGA+GGG | + | chr8_3:1436204-1436223 | None:intergenic | 30.0% |
| AGAGTATGTTAAAGAAATCG+AGG | - | chr8_3:1436258-1436277 | Msa1268440:three_prime_UTR | 30.0% | |
| TGATTCCTTATAGAACCATT+TGG | + | chr8_3:1436482-1436501 | None:intergenic | 30.0% | |
| AAAACAGCTGTTGAATTATG+TGG | - | chr8_3:1436536-1436555 | Msa1268440:intron | 30.0% | |
| !!! | CATGTAGTTTGTTTTGTCAA+AGG | - | chr8_3:1436928-1436947 | Msa1268440:intron | 30.0% |
| TTATATGTATTTCAGCTAGC+TGG | - | chr8_3:1437104-1437123 | Msa1268440:intron | 30.0% | |
| TATATGTATTTCAGCTAGCT+GGG | - | chr8_3:1437105-1437124 | Msa1268440:intron | 30.0% | |
| CATTTCAATTGATAAGGGTA+AGG | - | chr8_3:1437626-1437645 | Msa1268440:intron | 30.0% | |
| AAGAGTTATCAAACTTGAGA+GGG | + | chr8_3:1437695-1437714 | None:intergenic | 30.0% | |
| TAAGAGTTATCAAACTTGAG+AGG | + | chr8_3:1437696-1437715 | None:intergenic | 30.0% | |
| AAACAGGGAACTAATGAAAT+TGG | - | chr8_3:1437800-1437819 | Msa1268440:intron | 30.0% | |
| CATAGAGTTCAACATATTTG+CGG | + | chr8_3:1437884-1437903 | None:intergenic | 30.0% | |
| ATATGTTGAACTCTATGCTA+AGG | - | chr8_3:1437887-1437906 | Msa1268440:intron | 30.0% | |
| ! | CTTTGGTTAATTTCTGAGAG+AGG | + | chr8_3:1436205-1436224 | None:intergenic | 35.0% |
| CATATTTAGCCATACTTGCA+AGG | + | chr8_3:1436228-1436247 | None:intergenic | 35.0% | |
| GTATGTTAAAGAAATCGAGG+AGG | - | chr8_3:1436261-1436280 | Msa1268440:three_prime_UTR | 35.0% | |
| ATATGTATTTCAGCTAGCTG+GGG | - | chr8_3:1437106-1437125 | Msa1268440:intron | 35.0% | |
| ATGTACTAGTACCTTTCTTC+CGG | + | chr8_3:1437176-1437195 | None:intergenic | 35.0% | |
| ! | TAATTACCTTGTTTGGCATC+TGG | + | chr8_3:1437354-1437373 | None:intergenic | 35.0% |
| ! | AAGAGAGATCTTTTATCGCA+TGG | - | chr8_3:1437472-1437491 | Msa1268440:intron | 35.0% |
| ! | AGAGAGATCTTTTATCGCAT+GGG | - | chr8_3:1437473-1437492 | Msa1268440:intron | 35.0% |
| AAAGATCGCTCTAACTTTGA+AGG | - | chr8_3:1437654-1437673 | Msa1268440:intron | 35.0% | |
| CACAAGAAACTCTCTGAATT+AGG | - | chr8_3:1438077-1438096 | Msa1268440:CDS | 35.0% | |
| TTATCGTTCTCAATTGGCTA+AGG | - | chr8_3:1438118-1438137 | Msa1268440:intron | 35.0% | |
| ! | CTTTGGTTAATTTCTGAGAG+AGG | + | chr8_3:1436205-1436224 | None:intergenic | 35.0% |
| CATATTTAGCCATACTTGCA+AGG | + | chr8_3:1436228-1436247 | None:intergenic | 35.0% | |
| GTATGTTAAAGAAATCGAGG+AGG | - | chr8_3:1436261-1436280 | Msa1268440:three_prime_UTR | 35.0% | |
| ATATGTATTTCAGCTAGCTG+GGG | - | chr8_3:1437106-1437125 | Msa1268440:intron | 35.0% | |
| ATGTACTAGTACCTTTCTTC+CGG | + | chr8_3:1437176-1437195 | None:intergenic | 35.0% | |
| ! | TAATTACCTTGTTTGGCATC+TGG | + | chr8_3:1437354-1437373 | None:intergenic | 35.0% |
| ! | AAGAGAGATCTTTTATCGCA+TGG | - | chr8_3:1437472-1437491 | Msa1268440:intron | 35.0% |
| ! | AGAGAGATCTTTTATCGCAT+GGG | - | chr8_3:1437473-1437492 | Msa1268440:intron | 35.0% |
| AAAGATCGCTCTAACTTTGA+AGG | - | chr8_3:1437654-1437673 | Msa1268440:intron | 35.0% | |
| CACAAGAAACTCTCTGAATT+AGG | - | chr8_3:1438077-1438096 | Msa1268440:CDS | 35.0% | |
| TTATCGTTCTCAATTGGCTA+AGG | - | chr8_3:1438118-1438137 | Msa1268440:intron | 35.0% | |
| TAACCAAAGCCTTGCAAGTA+TGG | - | chr8_3:1436216-1436235 | Msa1268440:three_prime_UTR | 40.0% | |
| ATTTATAGGTGGCATGATGC+TGG | - | chr8_3:1436425-1436444 | Msa1268440:CDS | 40.0% | |
| TACGACGCAAAAACAAGAAC+AGG | - | chr8_3:1436452-1436471 | Msa1268440:CDS | 40.0% | |
| ACGACGCAAAAACAAGAACA+GGG | - | chr8_3:1436453-1436472 | Msa1268440:CDS | 40.0% | |
| GAATTATGTGGTCAGTGAGA+CGG | - | chr8_3:1436548-1436567 | Msa1268440:intron | 40.0% | |
| TTGAGAAACAGAGGAAGTGA+AGG | - | chr8_3:1436662-1436681 | Msa1268440:CDS | 40.0% | |
| ACACCCCAAAGTTTCATATG+CGG | - | chr8_3:1436689-1436708 | Msa1268440:CDS | 40.0% | |
| AGGTCCGCATATGAAACTTT+GGG | + | chr8_3:1436696-1436715 | None:intergenic | 40.0% | |
| AAGGTCCGCATATGAAACTT+TGG | + | chr8_3:1436697-1436716 | None:intergenic | 40.0% | |
| GATATTAACGTGTGGAGTCA+TGG | - | chr8_3:1436763-1436782 | Msa1268440:intron | 40.0% | |
| CCAACTATTCACTTTGTTCC+CGG | - | chr8_3:1437154-1437173 | Msa1268440:intron | 40.0% | |
| TGTACTAGTACCTTTCTTCC+GGG | + | chr8_3:1437175-1437194 | None:intergenic | 40.0% | |
| TCATTGGAATCTCCACAAGA+AGG | - | chr8_3:1437321-1437340 | Msa1268440:intron | 40.0% | |
| AAAGACATTGTAGCTCTCTC+CGG | - | chr8_3:1437506-1437525 | Msa1268440:intron | 40.0% | |
| ! | GCTCTAACTTTGAAGGTCAA+TGG | - | chr8_3:1437661-1437680 | Msa1268440:intron | 40.0% |
| ATTGAAGCTTCCTACAGACA+AGG | - | chr8_3:1437836-1437855 | Msa1268440:CDS | 40.0% | |
| TCAACATATTTGCGGAATGC+AGG | + | chr8_3:1437876-1437895 | None:intergenic | 40.0% | |
| TCTGAATTAGGCTTCAATCC+CGG | - | chr8_3:1438089-1438108 | Msa1268440:CDS | 40.0% | |
| TGGCAGTTATCGTTCTCAAT+TGG | - | chr8_3:1438112-1438131 | Msa1268440:intron | 40.0% | |
| TAACCAAAGCCTTGCAAGTA+TGG | - | chr8_3:1436216-1436235 | Msa1268440:three_prime_UTR | 40.0% | |
| ATTTATAGGTGGCATGATGC+TGG | - | chr8_3:1436425-1436444 | Msa1268440:CDS | 40.0% | |
| TACGACGCAAAAACAAGAAC+AGG | - | chr8_3:1436452-1436471 | Msa1268440:CDS | 40.0% | |
| ACGACGCAAAAACAAGAACA+GGG | - | chr8_3:1436453-1436472 | Msa1268440:CDS | 40.0% | |
| GAATTATGTGGTCAGTGAGA+CGG | - | chr8_3:1436548-1436567 | Msa1268440:intron | 40.0% | |
| TTGAGAAACAGAGGAAGTGA+AGG | - | chr8_3:1436662-1436681 | Msa1268440:CDS | 40.0% | |
| ACACCCCAAAGTTTCATATG+CGG | - | chr8_3:1436689-1436708 | Msa1268440:CDS | 40.0% | |
| AGGTCCGCATATGAAACTTT+GGG | + | chr8_3:1436696-1436715 | None:intergenic | 40.0% | |
| AAGGTCCGCATATGAAACTT+TGG | + | chr8_3:1436697-1436716 | None:intergenic | 40.0% | |
| GATATTAACGTGTGGAGTCA+TGG | - | chr8_3:1436763-1436782 | Msa1268440:intron | 40.0% | |
| CCAACTATTCACTTTGTTCC+CGG | - | chr8_3:1437154-1437173 | Msa1268440:intron | 40.0% | |
| TGTACTAGTACCTTTCTTCC+GGG | + | chr8_3:1437175-1437194 | None:intergenic | 40.0% | |
| TCATTGGAATCTCCACAAGA+AGG | - | chr8_3:1437321-1437340 | Msa1268440:intron | 40.0% | |
| AAAGACATTGTAGCTCTCTC+CGG | - | chr8_3:1437506-1437525 | Msa1268440:intron | 40.0% | |
| ! | GCTCTAACTTTGAAGGTCAA+TGG | - | chr8_3:1437661-1437680 | Msa1268440:intron | 40.0% |
| ATTGAAGCTTCCTACAGACA+AGG | - | chr8_3:1437836-1437855 | Msa1268440:CDS | 40.0% | |
| TCAACATATTTGCGGAATGC+AGG | + | chr8_3:1437876-1437895 | None:intergenic | 40.0% | |
| TCTGAATTAGGCTTCAATCC+CGG | - | chr8_3:1438089-1438108 | Msa1268440:CDS | 40.0% | |
| TGGCAGTTATCGTTCTCAAT+TGG | - | chr8_3:1438112-1438131 | Msa1268440:intron | 40.0% | |
| TAGCCATACTTGCAAGGCTT+TGG | + | chr8_3:1436222-1436241 | None:intergenic | 45.0% | |
| TACGCTAATCGTAGCATGAG+AGG | + | chr8_3:1436331-1436350 | None:intergenic | 45.0% | |
| CGACGCAAAAACAAGAACAG+GGG | - | chr8_3:1436454-1436473 | Msa1268440:CDS | 45.0% | |
| GACGCAAAAACAAGAACAGG+GGG | - | chr8_3:1436455-1436474 | Msa1268440:CDS | 45.0% | |
| ! | GGGGTCCAAATGGTTCTATA+AGG | - | chr8_3:1436474-1436493 | Msa1268440:CDS | 45.0% |
| CTGAACCATGCTGCTAACAA+GGG | - | chr8_3:1436509-1436528 | Msa1268440:intron | 45.0% | |
| GGTCCGCATATGAAACTTTG+GGG | + | chr8_3:1436695-1436714 | None:intergenic | 45.0% | |
| TTCATATGCGGACCTTTACC+AGG | - | chr8_3:1436701-1436720 | Msa1268440:CDS | 45.0% | |
| CCGGGAACAAAGTGAATAGT+TGG | + | chr8_3:1437157-1437176 | None:intergenic | 45.0% | |
| TCACTTTGTTCCCGGAAGAA+AGG | - | chr8_3:1437162-1437181 | Msa1268440:intron | 45.0% | |
| ! | TACCTTGTTTGGCATCTGGA+AGG | + | chr8_3:1437350-1437369 | None:intergenic | 45.0% |
| ! | TCAACTAGAGCCTTGTCTGT+AGG | + | chr8_3:1437849-1437868 | None:intergenic | 45.0% |
| TTGAGAACGATAACTGCCAC+CGG | + | chr8_3:1438111-1438130 | None:intergenic | 45.0% | |
| TGAGCTCAAGTAAGTAACCC+AGG | + | chr8_3:1438181-1438200 | None:intergenic | 45.0% | |
| TAGCCATACTTGCAAGGCTT+TGG | + | chr8_3:1436222-1436241 | None:intergenic | 45.0% | |
| TACGCTAATCGTAGCATGAG+AGG | + | chr8_3:1436331-1436350 | None:intergenic | 45.0% | |
| CGACGCAAAAACAAGAACAG+GGG | - | chr8_3:1436454-1436473 | Msa1268440:CDS | 45.0% | |
| GACGCAAAAACAAGAACAGG+GGG | - | chr8_3:1436455-1436474 | Msa1268440:CDS | 45.0% | |
| ! | GGGGTCCAAATGGTTCTATA+AGG | - | chr8_3:1436474-1436493 | Msa1268440:CDS | 45.0% |
| CTGAACCATGCTGCTAACAA+GGG | - | chr8_3:1436509-1436528 | Msa1268440:intron | 45.0% | |
| GGTCCGCATATGAAACTTTG+GGG | + | chr8_3:1436695-1436714 | None:intergenic | 45.0% | |
| TTCATATGCGGACCTTTACC+AGG | - | chr8_3:1436701-1436720 | Msa1268440:CDS | 45.0% | |
| CCGGGAACAAAGTGAATAGT+TGG | + | chr8_3:1437157-1437176 | None:intergenic | 45.0% | |
| TCACTTTGTTCCCGGAAGAA+AGG | - | chr8_3:1437162-1437181 | Msa1268440:intron | 45.0% | |
| ! | TACCTTGTTTGGCATCTGGA+AGG | + | chr8_3:1437350-1437369 | None:intergenic | 45.0% |
| ! | TCAACTAGAGCCTTGTCTGT+AGG | + | chr8_3:1437849-1437868 | None:intergenic | 45.0% |
| TTGAGAACGATAACTGCCAC+CGG | + | chr8_3:1438111-1438130 | None:intergenic | 45.0% | |
| TGAGCTCAAGTAAGTAACCC+AGG | + | chr8_3:1438181-1438200 | None:intergenic | 45.0% | |
| !! | AAAATTAATTAAACAAATTA+AGG | + | chr8_3:1436580-1436599 | None:intergenic | 5.0% |
| !! | AAAATTAATTAAACAAATTA+AGG | + | chr8_3:1436580-1436599 | None:intergenic | 5.0% |
| ACAAGAACAGGGGGTCCAAA+TGG | - | chr8_3:1436464-1436483 | Msa1268440:CDS | 50.0% | |
| GCTGAACCATGCTGCTAACA+AGG | - | chr8_3:1436508-1436527 | Msa1268440:intron | 50.0% | |
| TCAAGCCCTTGTTAGCAGCA+TGG | + | chr8_3:1436517-1436536 | None:intergenic | 50.0% | |
| TTATGTGGTCAGTGAGACGG+TGG | - | chr8_3:1436551-1436570 | Msa1268440:intron | 50.0% | |
| TCCTCGCACGTGTGCTAAAA+AGG | - | chr8_3:1437048-1437067 | Msa1268440:CDS | 50.0% | |
| CCTCGCACGTGTGCTAAAAA+GGG | - | chr8_3:1437049-1437068 | Msa1268440:CDS | 50.0% | |
| ATTTCAGCTAGCTGGGGTTG+TGG | - | chr8_3:1437112-1437131 | Msa1268440:intron | 50.0% | |
| TTGTGGCTGTAGAGGTCACT+AGG | - | chr8_3:1437129-1437148 | Msa1268440:intron | 50.0% | |
| TGTGGCTGTAGAGGTCACTA+GGG | - | chr8_3:1437130-1437149 | Msa1268440:intron | 50.0% | |
| TTGTACCAAAGTGTGGCCTC+CGG | + | chr8_3:1437528-1437547 | None:intergenic | 50.0% | |
| GAATTAGGCTTCAATCCCGG+TGG | - | chr8_3:1438092-1438111 | Msa1268440:CDS | 50.0% | |
| TGAGAACGATAACTGCCACC+GGG | + | chr8_3:1438110-1438129 | None:intergenic | 50.0% | |
| CAATTGGCTAAGGCAGCGTT+AGG | - | chr8_3:1438128-1438147 | Msa1268440:intron | 50.0% | |
| TGCCTCAACTGTTGTGATCC+TGG | - | chr8_3:1438160-1438179 | Msa1268440:intron | 50.0% | |
| GCCTCAACTGTTGTGATCCT+GGG | - | chr8_3:1438161-1438180 | Msa1268440:intron | 50.0% | |
| ACCCAGGATCACAACAGTTG+AGG | + | chr8_3:1438165-1438184 | None:intergenic | 50.0% | |
| ACAAGAACAGGGGGTCCAAA+TGG | - | chr8_3:1436464-1436483 | Msa1268440:CDS | 50.0% | |
| GCTGAACCATGCTGCTAACA+AGG | - | chr8_3:1436508-1436527 | Msa1268440:intron | 50.0% | |
| TCAAGCCCTTGTTAGCAGCA+TGG | + | chr8_3:1436517-1436536 | None:intergenic | 50.0% | |
| TTATGTGGTCAGTGAGACGG+TGG | - | chr8_3:1436551-1436570 | Msa1268440:intron | 50.0% | |
| TCCTCGCACGTGTGCTAAAA+AGG | - | chr8_3:1437048-1437067 | Msa1268440:CDS | 50.0% | |
| CCTCGCACGTGTGCTAAAAA+GGG | - | chr8_3:1437049-1437068 | Msa1268440:CDS | 50.0% | |
| ATTTCAGCTAGCTGGGGTTG+TGG | - | chr8_3:1437112-1437131 | Msa1268440:intron | 50.0% | |
| TTGTGGCTGTAGAGGTCACT+AGG | - | chr8_3:1437129-1437148 | Msa1268440:intron | 50.0% | |
| TGTGGCTGTAGAGGTCACTA+GGG | - | chr8_3:1437130-1437149 | Msa1268440:intron | 50.0% | |
| TTGTACCAAAGTGTGGCCTC+CGG | + | chr8_3:1437528-1437547 | None:intergenic | 50.0% | |
| GAATTAGGCTTCAATCCCGG+TGG | - | chr8_3:1438092-1438111 | Msa1268440:CDS | 50.0% | |
| TGAGAACGATAACTGCCACC+GGG | + | chr8_3:1438110-1438129 | None:intergenic | 50.0% | |
| CAATTGGCTAAGGCAGCGTT+AGG | - | chr8_3:1438128-1438147 | Msa1268440:intron | 50.0% | |
| TGCCTCAACTGTTGTGATCC+TGG | - | chr8_3:1438160-1438179 | Msa1268440:intron | 50.0% | |
| GCCTCAACTGTTGTGATCCT+GGG | - | chr8_3:1438161-1438180 | Msa1268440:intron | 50.0% | |
| ACCCAGGATCACAACAGTTG+AGG | + | chr8_3:1438165-1438184 | None:intergenic | 50.0% | |
| !! | CCCTTTTTAGCACACGTGCG+AGG | + | chr8_3:1437052-1437071 | None:intergenic | 55.0% |
| TCTGGAAGGCGACCTTCTTG+TGG | + | chr8_3:1437336-1437355 | None:intergenic | 55.0% | |
| CGCCTTCCAGATGCCAAACA+AGG | - | chr8_3:1437345-1437364 | Msa1268440:intron | 55.0% | |
| GACATTGTAGCTCTCTCCGG+AGG | - | chr8_3:1437509-1437528 | Msa1268440:intron | 55.0% | |
| GGCTAAGGCAGCGTTAGGAA+TGG | - | chr8_3:1438133-1438152 | Msa1268440:intron | 55.0% | |
| !! | CCCTTTTTAGCACACGTGCG+AGG | + | chr8_3:1437052-1437071 | None:intergenic | 55.0% |
| TCTGGAAGGCGACCTTCTTG+TGG | + | chr8_3:1437336-1437355 | None:intergenic | 55.0% | |
| CGCCTTCCAGATGCCAAACA+AGG | - | chr8_3:1437345-1437364 | Msa1268440:intron | 55.0% | |
| GACATTGTAGCTCTCTCCGG+AGG | - | chr8_3:1437509-1437528 | Msa1268440:intron | 55.0% | |
| GGCTAAGGCAGCGTTAGGAA+TGG | - | chr8_3:1438133-1438152 | Msa1268440:intron | 55.0% | |
| AGCTGGGGTTGTGGCTGTAG+AGG | - | chr8_3:1437121-1437140 | Msa1268440:intron | 60.0% | |
| TCTCTCCGGAGGCCACACTT+TGG | - | chr8_3:1437520-1437539 | Msa1268440:intron | 60.0% | |
| AGCTGGGGTTGTGGCTGTAG+AGG | - | chr8_3:1437121-1437140 | Msa1268440:intron | 60.0% | |
| TCTCTCCGGAGGCCACACTT+TGG | - | chr8_3:1437520-1437539 | Msa1268440:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 1436139 | 1438407 | 1436139 | ID=Msa1268440;Name=Msa1268440 |
| chr8_3 | mRNA | 1436139 | 1438407 | 1436139 | ID=Msa1268440-mRNA-1;Parent=Msa1268440;Name=Msa1268440-mRNA-1;_AED=0.14;_eAED=0.14;_QI=96|0.87|0.88|1|0.62|0.77|9|190|285 |
| chr8_3 | exon | 1436139 | 1436505 | 1436139 | ID=Msa1268440-mRNA-1:exon:409;Parent=Msa1268440-mRNA-1 |
| chr8_3 | exon | 1436638 | 1436740 | 1436638 | ID=Msa1268440-mRNA-1:exon:408;Parent=Msa1268440-mRNA-1 |
| chr8_3 | exon | 1436825 | 1436904 | 1436825 | ID=Msa1268440-mRNA-1:exon:407;Parent=Msa1268440-mRNA-1 |
| chr8_3 | exon | 1437005 | 1437087 | 1437005 | ID=Msa1268440-mRNA-1:exon:406;Parent=Msa1268440-mRNA-1 |
| chr8_3 | exon | 1437167 | 1437228 | 1437167 | ID=Msa1268440-mRNA-1:exon:405;Parent=Msa1268440-mRNA-1 |
| chr8_3 | exon | 1437363 | 1437427 | 1437363 | ID=Msa1268440-mRNA-1:exon:404;Parent=Msa1268440-mRNA-1 |
| chr8_3 | exon | 1437824 | 1437873 | 1437824 | ID=Msa1268440-mRNA-1:exon:403;Parent=Msa1268440-mRNA-1 |
| chr8_3 | exon | 1437989 | 1438113 | 1437989 | ID=Msa1268440-mRNA-1:exon:402;Parent=Msa1268440-mRNA-1 |
| chr8_3 | exon | 1438199 | 1438407 | 1438199 | ID=Msa1268440-mRNA-1:exon:401;Parent=Msa1268440-mRNA-1 |
| chr8_3 | five_prime_UTR | 1438312 | 1438407 | 1438312 | ID=Msa1268440-mRNA-1:five_prime_utr;Parent=Msa1268440-mRNA-1 |
| chr8_3 | CDS | 1438199 | 1438311 | 1438199 | ID=Msa1268440-mRNA-1:cds;Parent=Msa1268440-mRNA-1 |
| chr8_3 | CDS | 1437989 | 1438113 | 1437989 | ID=Msa1268440-mRNA-1:cds;Parent=Msa1268440-mRNA-1 |
| chr8_3 | CDS | 1437824 | 1437873 | 1437824 | ID=Msa1268440-mRNA-1:cds;Parent=Msa1268440-mRNA-1 |
| chr8_3 | CDS | 1437363 | 1437427 | 1437363 | ID=Msa1268440-mRNA-1:cds;Parent=Msa1268440-mRNA-1 |
| chr8_3 | CDS | 1437167 | 1437228 | 1437167 | ID=Msa1268440-mRNA-1:cds;Parent=Msa1268440-mRNA-1 |
| chr8_3 | CDS | 1437005 | 1437087 | 1437005 | ID=Msa1268440-mRNA-1:cds;Parent=Msa1268440-mRNA-1 |
| chr8_3 | CDS | 1436825 | 1436904 | 1436825 | ID=Msa1268440-mRNA-1:cds;Parent=Msa1268440-mRNA-1 |
| chr8_3 | CDS | 1436638 | 1436740 | 1436638 | ID=Msa1268440-mRNA-1:cds;Parent=Msa1268440-mRNA-1 |
| chr8_3 | CDS | 1436329 | 1436505 | 1436329 | ID=Msa1268440-mRNA-1:cds;Parent=Msa1268440-mRNA-1 |
| chr8_3 | three_prime_UTR | 1436139 | 1436328 | 1436139 | ID=Msa1268440-mRNA-1:three_prime_utr;Parent=Msa1268440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
