Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297390 | sp|Q1PF16|BH019_ARATH | 35.570 | 149 | 79 | 5 | 132 | 265 | 149 | 295 | 1.78e-18 | 86.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297390 | A0A072TFY6 | 50.920 | 326 | 97 | 11 | 3 | 270 | 1 | 321 | 2.06e-80 | 254 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0096590 | Msa1297390 | 0.803929 | 2.756842e-49 | -8.615850e-47 |
| Msa0209060 | Msa1297390 | 0.804760 | 1.850167e-49 | -8.615850e-47 |
| Msa1231720 | Msa1297390 | 0.800230 | 1.588665e-48 | -8.615850e-47 |
| Msa1253750 | Msa1297390 | 0.810138 | 1.338108e-50 | -8.615850e-47 |
| Msa1297390 | Msa1406840 | 0.837127 | 6.245025e-57 | -8.615850e-47 |
| Msa1297390 | Msa1431160 | 0.816152 | 6.406107e-52 | -8.615850e-47 |
| Msa0987640 | Msa1297390 | 0.813131 | 2.989123e-51 | -8.615850e-47 |
| Msa1018590 | Msa1297390 | 0.817669 | 2.925324e-52 | -8.615850e-47 |
| Msa1069010 | Msa1297390 | 0.804537 | 2.059810e-49 | -8.615850e-47 |
| Msa0288540 | Msa1297390 | 0.803796 | 2.938122e-49 | -8.615850e-47 |
| Msa0326770 | Msa1297390 | 0.818545 | 1.853668e-52 | -8.615850e-47 |
| Msa0354670 | Msa1297390 | 0.802151 | 6.426536e-49 | -8.615850e-47 |
| Msa1148210 | Msa1297390 | 0.822189 | 2.705836e-53 | -8.615850e-47 |
| Msa1197910 | Msa1297390 | 0.800451 | 1.432169e-48 | -8.615850e-47 |
| Msa1205910 | Msa1297390 | 0.959627 | 1.192183e-117 | -8.615850e-47 |
| Msa0913550 | Msa1297390 | 0.828363 | 9.374046e-55 | -8.615850e-47 |
| Msa0946010 | Msa1297390 | 0.807796 | 4.243688e-50 | -8.615850e-47 |
| Msa0951150 | Msa1297390 | 0.819038 | 1.432684e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297390 | MtrunA17_Chr4g0054621 | 50.920 | 326 | 97 | 11 | 3 | 270 | 22 | 342 | 7.35e-84 | 254 |
| Msa1297390 | MtrunA17_Chr2g0307131 | 38.484 | 343 | 123 | 10 | 5 | 269 | 23 | 355 | 3.42e-55 | 181 |
| Msa1297390 | MtrunA17_Chr6g0468491 | 40.248 | 323 | 127 | 13 | 5 | 270 | 1 | 314 | 1.24e-54 | 179 |
| Msa1297390 | MtrunA17_Chr4g0033391 | 39.032 | 310 | 135 | 7 | 5 | 271 | 24 | 322 | 2.30e-50 | 168 |
| Msa1297390 | MtrunA17_Chr2g0307141 | 38.439 | 346 | 125 | 11 | 5 | 270 | 23 | 360 | 1.02e-47 | 162 |
| Msa1297390 | MtrunA17_Chr4g0054581 | 39.058 | 361 | 120 | 17 | 5 | 270 | 24 | 379 | 3.50e-47 | 161 |
| Msa1297390 | MtrunA17_Chr4g0033291 | 38.485 | 330 | 115 | 11 | 5 | 270 | 24 | 329 | 1.59e-44 | 153 |
| Msa1297390 | MtrunA17_Chr4g0033281 | 36.646 | 322 | 128 | 9 | 5 | 269 | 23 | 325 | 2.14e-40 | 142 |
| Msa1297390 | MtrunA17_Chr5g0400621 | 46.939 | 147 | 69 | 2 | 132 | 269 | 187 | 333 | 3.65e-31 | 118 |
| Msa1297390 | MtrunA17_Chr6g0468461 | 36.184 | 304 | 116 | 15 | 5 | 245 | 23 | 311 | 2.07e-30 | 116 |
| Msa1297390 | MtrunA17_Chr7g0225901 | 37.900 | 219 | 90 | 8 | 64 | 245 | 31 | 240 | 3.32e-29 | 111 |
| Msa1297390 | MtrunA17_Chr5g0400641 | 48.462 | 130 | 56 | 3 | 132 | 251 | 28 | 156 | 2.27e-28 | 106 |
| Msa1297390 | MtrunA17_Chr4g0002801 | 32.632 | 190 | 87 | 4 | 93 | 266 | 167 | 331 | 8.64e-21 | 90.1 |
| Msa1297390 | MtrunA17_Chr4g0054561 | 36.029 | 136 | 80 | 1 | 132 | 260 | 185 | 320 | 4.90e-19 | 85.1 |
| Msa1297390 | MtrunA17_Chr2g0280161 | 34.014 | 147 | 87 | 3 | 132 | 268 | 207 | 353 | 1.27e-18 | 84.3 |
| Msa1297390 | MtrunA17_Chr5g0400661 | 31.313 | 198 | 84 | 6 | 93 | 265 | 164 | 334 | 1.27e-18 | 84.0 |
| Msa1297390 | MtrunA17_Chr4g0002831 | 33.784 | 148 | 77 | 4 | 126 | 263 | 66 | 202 | 4.26e-17 | 77.8 |
| Msa1297390 | MtrunA17_Chr4g0049331 | 32.215 | 149 | 92 | 2 | 129 | 268 | 162 | 310 | 1.04e-16 | 78.6 |
| Msa1297390 | MtrunA17_Chr2g0333641 | 34.058 | 138 | 80 | 4 | 132 | 260 | 167 | 302 | 1.78e-16 | 77.8 |
| Msa1297390 | MtrunA17_Chr4g0054551 | 32.353 | 136 | 85 | 1 | 132 | 260 | 185 | 320 | 2.12e-16 | 77.8 |
| Msa1297390 | MtrunA17_Chr7g0233441 | 34.483 | 145 | 74 | 4 | 129 | 263 | 61 | 194 | 6.22e-16 | 74.3 |
| Msa1297390 | MtrunA17_Chr4g0002781 | 33.784 | 148 | 84 | 3 | 132 | 266 | 204 | 350 | 6.39e-16 | 76.6 |
| Msa1297390 | MtrunA17_Chr2g0333621 | 28.421 | 190 | 96 | 5 | 93 | 269 | 153 | 315 | 3.54e-15 | 73.9 |
| Msa1297390 | MtrunA17_Chr4g0002851 | 34.752 | 141 | 71 | 4 | 129 | 263 | 69 | 194 | 1.60e-14 | 70.5 |
| Msa1297390 | MtrunA17_Chr2g0333611 | 27.354 | 223 | 110 | 7 | 85 | 267 | 7 | 217 | 1.77e-14 | 70.9 |
| Msa1297390 | MtrunA17_Chr5g0400671 | 29.286 | 140 | 93 | 1 | 132 | 265 | 184 | 323 | 2.22e-14 | 72.0 |
| Msa1297390 | MtrunA17_Chr4g0054571 | 32.258 | 155 | 83 | 3 | 132 | 267 | 180 | 331 | 1.71e-13 | 69.3 |
| Msa1297390 | MtrunA17_Chr8g0336681 | 28.108 | 185 | 93 | 4 | 93 | 261 | 171 | 331 | 7.18e-13 | 67.8 |
| Msa1297390 | MtrunA17_Chr2g0333541 | 41.573 | 89 | 45 | 2 | 189 | 271 | 187 | 274 | 3.07e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297390 | AT2G22760.1 | 35.570 | 149 | 79 | 5 | 132 | 265 | 149 | 295 | 1.81e-19 | 86.3 |
| Msa1297390 | AT2G22760.2 | 35.156 | 128 | 67 | 4 | 132 | 245 | 149 | 274 | 1.97e-14 | 72.0 |
| Msa1297390 | AT4G37850.2 | 30.872 | 149 | 89 | 4 | 132 | 268 | 182 | 328 | 1.34e-12 | 67.0 |
| Msa1297390 | AT4G37850.1 | 30.872 | 149 | 89 | 4 | 132 | 268 | 182 | 328 | 1.34e-12 | 67.0 |
| Msa1297390 | AT2G22770.1 | 28.205 | 156 | 88 | 4 | 132 | 263 | 162 | 317 | 1.40e-12 | 67.0 |
Find 46 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAAATCCATTATGATTT+TGG | 0.102337 | 8_3:+57655789 | None:intergenic |
| ACGCTGATAACCCATAAAAT+TGG | 0.197823 | 8_3:+57658948 | None:intergenic |
| ATGCTGCCATGCGTAGGTTT+TGG | 0.256145 | 8_3:+57655548 | None:intergenic |
| GATGGACAAGACTTCAATAT+TGG | 0.295753 | 8_3:-57656026 | Msa1297390:intron |
| CCATAAAATTGGGTTGGGTT+TGG | 0.308294 | 8_3:+57658959 | None:intergenic |
| CAAAGAATTTAAAGAGCGTT+TGG | 0.344136 | 8_3:-57655984 | Msa1297390:CDS |
| TGTCGTCAATAACAATGTTA+TGG | 0.377578 | 8_3:-57655729 | Msa1297390:CDS |
| ATCCAATGCCAAAATCATAA+TGG | 0.388524 | 8_3:-57655797 | Msa1297390:CDS |
| ATAACAATGTTATGGCCCTT+GGG | 0.410525 | 8_3:-57655721 | Msa1297390:CDS |
| CGCTGATAACCCATAAAATT+GGG | 0.416638 | 8_3:+57658949 | None:intergenic |
| GGTCTGTGTCTGTTCCTCTA+AGG | 0.419045 | 8_3:+57659144 | None:intergenic |
| ATAACCCATAAAATTGGGTT+GGG | 0.425291 | 8_3:+57658954 | None:intergenic |
| AGGCTACAACTTGACCATAA+AGG | 0.431305 | 8_3:-57655578 | Msa1297390:CDS |
| AATAACAATGTTATGGCCCT+TGG | 0.435181 | 8_3:-57655722 | Msa1297390:CDS |
| TCAGCGTCATTGCCAGAGTT+AGG | 0.436685 | 8_3:-57658932 | Msa1297390:CDS |
| AAATTTGTGTTTCCTAACTC+TGG | 0.446748 | 8_3:+57658920 | None:intergenic |
| TACTCTTAGCAAGGAAGAAA+CGG | 0.451484 | 8_3:-57659086 | Msa1297390:CDS |
| CTGGAAAACATATCTTGATT+CGG | 0.463404 | 8_3:-57655820 | Msa1297390:CDS |
| AACGTGGAAGCAAAAGTGTC+TGG | 0.469222 | 8_3:-57655839 | Msa1297390:CDS |
| ATCCTTTACCTCAGCAATGA+TGG | 0.474722 | 8_3:+57655679 | None:intergenic |
| TCAGTTTCACAACAGAGGTC+TGG | 0.484300 | 8_3:+57655899 | None:intergenic |
| TATTAATTTGCAGGAAATGG+TGG | 0.500169 | 8_3:-57659230 | Msa1297390:intron |
| GATAACCCATAAAATTGGGT+TGG | 0.506362 | 8_3:+57658953 | None:intergenic |
| TTCTTCCTTGCTAAGAGTAG+AGG | 0.512428 | 8_3:+57659090 | None:intergenic |
| GTCAAAAGACATAATTTGAA+AGG | 0.514398 | 8_3:+57658985 | None:intergenic |
| TTCCACGTTGATGAGTGATT+CGG | 0.527891 | 8_3:+57655853 | None:intergenic |
| CACTTTCAGTTTCACAACAG+AGG | 0.563363 | 8_3:+57655894 | None:intergenic |
| CATTTCCTCTACTCTTAGCA+AGG | 0.565542 | 8_3:-57659095 | Msa1297390:CDS |
| TAACAATGTTATGGCCCTTG+GGG | 0.572849 | 8_3:-57655720 | Msa1297390:CDS |
| CACGTTGATGAGTGATTCGG+TGG | 0.575405 | 8_3:+57655856 | None:intergenic |
| ATTATTGTATAGATTGGCGA+AGG | 0.585734 | 8_3:-57655598 | Msa1297390:intron |
| CTGAGTCAAACATTGTTGCA+TGG | 0.587333 | 8_3:+57659123 | None:intergenic |
| AGAAGAGGGGAAGAAATCAA+AGG | 0.590831 | 8_3:-57655951 | Msa1297390:CDS |
| CACAATCTGTGTCATGTGAA+AGG | 0.591624 | 8_3:+57659173 | None:intergenic |
| ACTTCAATGCTGCCATGCGT+AGG | 0.592406 | 8_3:+57655542 | None:intergenic |
| AAAAGACATAATTTGAAAGG+AGG | 0.613846 | 8_3:+57658988 | None:intergenic |
| CATGCAACAATGTTTGACTC+AGG | 0.621521 | 8_3:-57659122 | Msa1297390:CDS |
| ATCAAAGGAAGATCAGTCGA+TGG | 0.644964 | 8_3:-57655936 | Msa1297390:CDS |
| TGTCGACGATAGAATCCCCA+AGG | 0.650856 | 8_3:+57655705 | None:intergenic |
| CGACATTACCATCATTGCTG+AGG | 0.653958 | 8_3:-57655687 | Msa1297390:intron |
| AAAGGAAGATCAGTCGATGG+TGG | 0.662321 | 8_3:-57655933 | Msa1297390:CDS |
| ACTCGTCCAAAACCTACGCA+TGG | 0.666381 | 8_3:-57655554 | Msa1297390:CDS |
| ATACAACTTATTTGACGAGG+AGG | 0.673794 | 8_3:-57659203 | Msa1297390:CDS |
| TGAATACAACTTATTTGACG+AGG | 0.701979 | 8_3:-57659206 | Msa1297390:CDS |
| GTCGACGATAGAATCCCCAA+GGG | 0.728713 | 8_3:+57655706 | None:intergenic |
| CACCGAATCACTCATCAACG+TGG | 0.739553 | 8_3:-57655855 | Msa1297390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGAATTTTCAATTATTTATT+GGG | + | chr8_3:57656656-57656675 | None:intergenic | 10.0% |
| !!! | TTGAATTTTCAATTATTTAT+TGG | + | chr8_3:57656657-57656676 | None:intergenic | 10.0% |
| !!! | TTGTTAGTTATTTTATTATA+TGG | + | chr8_3:57656864-57656883 | None:intergenic | 10.0% |
| !!! | GTTATTATTTTTTTTATAGA+GGG | + | chr8_3:57657251-57657270 | None:intergenic | 10.0% |
| !!! | TGTTATTATTTTTTTTATAG+AGG | + | chr8_3:57657252-57657271 | None:intergenic | 10.0% |
| !! | AGTATAACTTATAAGATAAA+AGG | + | chr8_3:57655681-57655700 | None:intergenic | 15.0% |
| !!! | AACTTTTCACAAAAATATTA+TGG | - | chr8_3:57655953-57655972 | Msa1297390:CDS | 15.0% |
| !!! | CTTTTTATTCTTTTTTTTAG+AGG | + | chr8_3:57656701-57656720 | None:intergenic | 15.0% |
| !! | TTACAAAGAAAACTATATAT+TGG | + | chr8_3:57657080-57657099 | None:intergenic | 15.0% |
| !!! | TAGTTTTCTTTGTAAAAATA+TGG | - | chr8_3:57657085-57657104 | Msa1297390:intron | 15.0% |
| !!! | ATACAAAAGTGTATATAATA+CGG | + | chr8_3:57657169-57657188 | None:intergenic | 15.0% |
| !!! | ATTAGGATTAATTATAGTTT+TGG | - | chr8_3:57657366-57657385 | Msa1297390:intron | 15.0% |
| !! | AAGTTACATGATTATATTAA+AGG | - | chr8_3:57657660-57657679 | Msa1297390:intron | 15.0% |
| !!! | ACATTTAAAGTTAAAGTTAA+CGG | + | chr8_3:57657802-57657821 | None:intergenic | 15.0% |
| !! | TTAAAAATTAATAGGATCTA+TGG | + | chr8_3:57657855-57657874 | None:intergenic | 15.0% |
| !!! | TTCTTTGATTATTAATTTGC+AGG | - | chr8_3:57655739-57655758 | Msa1297390:CDS | 20.0% |
| !!! | TTTTTTTGAAGATCTTTTTG+AGG | + | chr8_3:57656095-57656114 | None:intergenic | 20.0% |
| !! | ATAGTTGTACAAATATCTAA+GGG | + | chr8_3:57656976-57656995 | None:intergenic | 20.0% |
| !! | AATAGTTGTACAAATATCTA+AGG | + | chr8_3:57656977-57656996 | None:intergenic | 20.0% |
| !! | AGAAAGGTAAAAATATAATG+CGG | + | chr8_3:57657035-57657054 | None:intergenic | 20.0% |
| !! | CCTAATAAATAAAGTGATAT+GGG | + | chr8_3:57657352-57657371 | None:intergenic | 20.0% |
| !! | TCCTAATAAATAAAGTGATA+TGG | + | chr8_3:57657353-57657372 | None:intergenic | 20.0% |
| !!! | GATTCGTTATTGTTTTTTAT+AGG | - | chr8_3:57657548-57657567 | Msa1297390:intron | 20.0% |
| !! | ATGAAAACAACAAATTAGTT+AGG | + | chr8_3:57658849-57658868 | None:intergenic | 20.0% |
| !!! | TCGTTGATTTTAAAACTTAT+GGG | + | chr8_3:57658820-57658839 | None:intergenic | 20.0% |
| !!! | ATCGTTGATTTTAAAACTTA+TGG | + | chr8_3:57658819-57658838 | None:intergenic | 20.0% |
| !!! | AAGTTTTAAAATCAACGATT+TGG | - | chr8_3:57657737-57657756 | Msa1297390:intron | 20.0% |
| !! | TTAACTTTAAATGTCTAAAG+TGG | - | chr8_3:57657808-57657827 | Msa1297390:intron | 20.0% |
| !!! | TTTTTTTAAACAATGACCAT+TGG | - | chr8_3:57657895-57657914 | Msa1297390:intron | 20.0% |
| !! | AAAAGTGAAAAAATTAGAAG+TGG | + | chr8_3:57658094-57658113 | None:intergenic | 20.0% |
| !! | TATACTGTCAAAAAAAAAAG+AGG | - | chr8_3:57658259-57658278 | Msa1297390:intron | 20.0% |
| !! | AAATCTCAAAAACAAAATCT+AGG | - | chr8_3:57658303-57658322 | Msa1297390:intron | 20.0% |
| !! | AAAACTGAAGTAAAAATTGA+GGG | - | chr8_3:57658791-57658810 | Msa1297390:intron | 20.0% |
| !!! | AAGTTTTAAAATCAACGATT+TGG | + | chr8_3:57657737-57657756 | None:intergenic | 20.0% |
| !!! | ATCGTTGATTTTAAAACTTA+TGG | - | chr8_3:57658819-57658838 | Msa1297390:intron | 20.0% |
| !!! | TCGTTGATTTTAAAACTTAT+GGG | - | chr8_3:57658820-57658839 | Msa1297390:intron | 20.0% |
| !!! | CTAATTTGTTGTTTTCATTT+TGG | + | chr8_3:57657708-57657727 | None:intergenic | 20.0% |
| !! | ATGAAAACAACAAATTAGTT+AGG | - | chr8_3:57658849-57658868 | Msa1297390:CDS | 20.0% |
| !! | TGAAAACAACAAATTAGTTA+GGG | - | chr8_3:57658850-57658869 | Msa1297390:CDS | 20.0% |
| !!! | CTAATAAACAGATTTTACAT+CGG | + | chr8_3:57658933-57658952 | None:intergenic | 20.0% |
| !! | TGTAAAATCTGTTTATTAGA+TGG | - | chr8_3:57658934-57658953 | Msa1297390:CDS | 20.0% |
| !!! | TTCTTTTTACTTCAATGAAA+AGG | - | chr8_3:57659323-57659342 | Msa1297390:intron | 20.0% |
| ! | ATGCATTTGAAAGATAAGAA+GGG | + | chr8_3:57655582-57655601 | None:intergenic | 25.0% |
| ! | TATGCATTTGAAAGATAAGA+AGG | + | chr8_3:57655583-57655602 | None:intergenic | 25.0% |
| ! | CAGAATCAAATGCTATATTA+AGG | + | chr8_3:57655655-57655674 | None:intergenic | 25.0% |
| !!! | GATTATTAATTTGCAGGAAA+TGG | - | chr8_3:57655745-57655764 | Msa1297390:CDS | 25.0% |
| ! | AAAAGACATAATTTGAAAGG+AGG | + | chr8_3:57655993-57656012 | None:intergenic | 25.0% |
| ! | GTCAAAAGACATAATTTGAA+AGG | + | chr8_3:57655996-57656015 | None:intergenic | 25.0% |
| ! | CAAAAAAATCAAAAGCAAAG+AGG | - | chr8_3:57656107-57656126 | Msa1297390:intron | 25.0% |
| !! | TGTATTGACCTAATCAAAAT+TGG | + | chr8_3:57657320-57657339 | None:intergenic | 25.0% |
| !! | CCCATATCACTTTATTTATT+AGG | - | chr8_3:57657349-57657368 | Msa1297390:intron | 25.0% |
| !! | TCTGACTTTCTATTTTCATA+GGG | + | chr8_3:57657425-57657444 | None:intergenic | 25.0% |
| !! | ATCTGACTTTCTATTTTCAT+AGG | + | chr8_3:57657426-57657445 | None:intergenic | 25.0% |
| ! | TAAAGGCTTAATTCGATATT+TGG | - | chr8_3:57657677-57657696 | Msa1297390:intron | 25.0% |
| ! | AAAATTAATAGGATCTATGG+TGG | + | chr8_3:57657852-57657871 | None:intergenic | 25.0% |
| !! | AGATGAATTTCTGGAAAATA+AGG | + | chr8_3:57658050-57658069 | None:intergenic | 25.0% |
| ! | TGATGTAGTTTATTGATGAA+TGG | + | chr8_3:57658227-57658246 | None:intergenic | 25.0% |
| ! | TCAAAAACAAAATCTAGGTT+CGG | - | chr8_3:57658308-57658327 | Msa1297390:intron | 25.0% |
| !! | TATAAAGTTTTGCACAAACT+GGG | + | chr8_3:57658471-57658490 | None:intergenic | 25.0% |
| !!! | TTTGGGTTTTTGAGATTAAT+GGG | + | chr8_3:57658609-57658628 | None:intergenic | 25.0% |
| !!! | ATTTGGGTTTTTGAGATTAA+TGG | + | chr8_3:57658610-57658629 | None:intergenic | 25.0% |
| ! | GAAAACTGAAGTAAAAATTG+AGG | - | chr8_3:57658790-57658809 | Msa1297390:intron | 25.0% |
| ! | GAAAACAACAAATTAGTTAG+GGG | - | chr8_3:57658851-57658870 | Msa1297390:CDS | 25.0% |
| ! | TATAGGCTTAATTCGATATT+TGG | + | chr8_3:57658878-57658897 | None:intergenic | 25.0% |
| !! | CAAGAAATCCATTATGATTT+TGG | + | chr8_3:57659192-57659211 | None:intergenic | 25.0% |
| ! | CTTCTCATTATTGTATAGAT+TGG | - | chr8_3:57659374-57659393 | Msa1297390:intron | 25.0% |
| !! | TATTAATTTGCAGGAAATGG+TGG | - | chr8_3:57655748-57655767 | Msa1297390:CDS | 30.0% |
| TGAATACAACTTATTTGACG+AGG | - | chr8_3:57655772-57655791 | Msa1297390:intron | 30.0% | |
| ATAACCCATAAAATTGGGTT+GGG | + | chr8_3:57656027-57656046 | None:intergenic | 30.0% | |
| AAATTTGTGTTTCCTAACTC+TGG | + | chr8_3:57656061-57656080 | None:intergenic | 30.0% | |
| TCAAGCTCAAGATAATGTTA+AGG | - | chr8_3:57656138-57656157 | Msa1297390:intron | 30.0% | |
| ATAGTACGTATACCTTCATT+AGG | + | chr8_3:57656228-57656247 | None:intergenic | 30.0% | |
| GAAATGACTGGATCAAAATT+TGG | + | chr8_3:57656393-57656412 | None:intergenic | 30.0% | |
| !! | CTCTAACGTTATTTTACACA+TGG | + | chr8_3:57656556-57656575 | None:intergenic | 30.0% |
| TTGTAACAAATGTGTTTGAC+TGG | - | chr8_3:57656764-57656783 | Msa1297390:intron | 30.0% | |
| AGCCAAAAACACATAAAGAT+GGG | + | chr8_3:57656819-57656838 | None:intergenic | 30.0% | |
| AAGCCAAAAACACATAAAGA+TGG | + | chr8_3:57656820-57656839 | None:intergenic | 30.0% | |
| TACCTTTCTCTCTATTACTT+TGG | - | chr8_3:57657046-57657065 | Msa1297390:intron | 30.0% | |
| AACCAAAGTAATAGAGAGAA+AGG | + | chr8_3:57657051-57657070 | None:intergenic | 30.0% | |
| CCATTTGTTTGACAATCTAA+TGG | + | chr8_3:57657115-57657134 | None:intergenic | 30.0% | |
| CCATTAGATTGTCAAACAAA+TGG | - | chr8_3:57657112-57657131 | Msa1297390:intron | 30.0% | |
| ! | ACACTTTTGTATTTTGCATC+AGG | - | chr8_3:57657177-57657196 | Msa1297390:intron | 30.0% |
| TGCAAAAGGGTTAAACTTAT+GGG | + | chr8_3:57657281-57657300 | None:intergenic | 30.0% | |
| ! | ACCTAATCAAAATTGGTCTA+GGG | + | chr8_3:57657313-57657332 | None:intergenic | 30.0% |
| ! | CTGACTTTCTATTTTCATAG+GGG | + | chr8_3:57657424-57657443 | None:intergenic | 30.0% |
| ! | CAAAGACTTAATTGCAGTTT+TGG | + | chr8_3:57657608-57657627 | None:intergenic | 30.0% |
| AAAACTGAAGCAAGAATTGA+GGG | + | chr8_3:57657764-57657783 | None:intergenic | 30.0% | |
| ! | TCTTGCTTCAGTTTTCAAAA+AGG | - | chr8_3:57657769-57657788 | Msa1297390:intron | 30.0% |
| AAAGTTAAAGTTAACGGTCT+AGG | + | chr8_3:57657796-57657815 | None:intergenic | 30.0% | |
| TTGTGATGAAGATGAATTTC+TGG | + | chr8_3:57658059-57658078 | None:intergenic | 30.0% | |
| !! | AAAAGGTTGATGAAGGTTTA+AGG | + | chr8_3:57658139-57658158 | None:intergenic | 30.0% |
| ACTGTCAAAAAAAAAAGAGG+AGG | - | chr8_3:57658262-57658281 | Msa1297390:intron | 30.0% | |
| ! | CTATAAAGTTTTGCACAAAC+TGG | + | chr8_3:57658472-57658491 | None:intergenic | 30.0% |
| AAGAATTCGAGAGAAGAAAT+TGG | + | chr8_3:57658511-57658530 | None:intergenic | 30.0% | |
| TTGATGTTGTGAAGTAGATT+TGG | + | chr8_3:57658543-57658562 | None:intergenic | 30.0% | |
| GATTAAATCAATTTGAGAGG+GGG | + | chr8_3:57658572-57658591 | None:intergenic | 30.0% | |
| GGATTAAATCAATTTGAGAG+GGG | + | chr8_3:57658573-57658592 | None:intergenic | 30.0% | |
| GGGATTAAATCAATTTGAGA+GGG | + | chr8_3:57658574-57658593 | None:intergenic | 30.0% | |
| AGGGATTAAATCAATTTGAG+AGG | + | chr8_3:57658575-57658594 | None:intergenic | 30.0% | |
| TTAATGGGATGAATTAGCTA+GGG | + | chr8_3:57658594-57658613 | None:intergenic | 30.0% | |
| ATTAATGGGATGAATTAGCT+AGG | + | chr8_3:57658595-57658614 | None:intergenic | 30.0% | |
| CTGACAACAATAAAGGATTT+GGG | + | chr8_3:57658626-57658645 | None:intergenic | 30.0% | |
| AGTTTGTGCAATTGAATTTC+TGG | - | chr8_3:57658656-57658675 | Msa1297390:intron | 30.0% | |
| GTTTGTGCAATTGAATTTCT+GGG | - | chr8_3:57658657-57658676 | Msa1297390:intron | 30.0% | |
| TTTGTGCAATTGAATTTCTG+GGG | - | chr8_3:57658658-57658677 | Msa1297390:intron | 30.0% | |
| TGGGGAGATTTAATACAAAT+TGG | - | chr8_3:57658676-57658695 | Msa1297390:intron | 30.0% | |
| GGGGAGATTTAATACAAATT+GGG | - | chr8_3:57658677-57658696 | Msa1297390:intron | 30.0% | |
| GGGAGATTTAATACAAATTG+GGG | - | chr8_3:57658678-57658697 | Msa1297390:intron | 30.0% | |
| !! | CAAAGAATTTAAAGAGCGTT+TGG | - | chr8_3:57658994-57659013 | Msa1297390:CDS | 30.0% |
| !! | TTTGGCAATTTTAGAAGAAG+AGG | - | chr8_3:57659012-57659031 | Msa1297390:CDS | 30.0% |
| !! | TTGGCAATTTTAGAAGAAGA+GGG | - | chr8_3:57659013-57659032 | Msa1297390:CDS | 30.0% |
| CTGGAAAACATATCTTGATT+CGG | - | chr8_3:57659158-57659177 | Msa1297390:CDS | 30.0% | |
| ATCCAATGCCAAAATCATAA+TGG | - | chr8_3:57659181-57659200 | Msa1297390:CDS | 30.0% | |
| !! | ATCCATTATGATTTTGGCAT+TGG | + | chr8_3:57659186-57659205 | None:intergenic | 30.0% |
| TGTCGTCAATAACAATGTTA+TGG | - | chr8_3:57659249-57659268 | Msa1297390:intron | 30.0% | |
| ATTATTGTATAGATTGGCGA+AGG | - | chr8_3:57659380-57659399 | Msa1297390:intron | 30.0% | |
| !! | GTTGGTTATTTGACTTGGTA+AGG | - | chr8_3:57655550-57655569 | Msa1297390:CDS | 35.0% |
| CTTGAGAGACATTGCATAAA+TGG | - | chr8_3:57655699-57655718 | Msa1297390:CDS | 35.0% | |
| ATACAACTTATTTGACGAGG+AGG | - | chr8_3:57655775-57655794 | Msa1297390:intron | 35.0% | |
| ! | AGATTGTGCATTTTCCTTAG+AGG | - | chr8_3:57655820-57655839 | Msa1297390:CDS | 35.0% |
| TACTCTTAGCAAGGAAGAAA+CGG | - | chr8_3:57655892-57655911 | Msa1297390:CDS | 35.0% | |
| !! | AGGAAGAAACGGATTTTGAT+CGG | - | chr8_3:57655903-57655922 | Msa1297390:CDS | 35.0% |
| ! | CAAACCCAACCCAATTTTAT+GGG | - | chr8_3:57656020-57656039 | Msa1297390:intron | 35.0% |
| GATAACCCATAAAATTGGGT+TGG | + | chr8_3:57656028-57656047 | None:intergenic | 35.0% | |
| CGCTGATAACCCATAAAATT+GGG | + | chr8_3:57656032-57656051 | None:intergenic | 35.0% | |
| ACGCTGATAACCCATAAAAT+TGG | + | chr8_3:57656033-57656052 | None:intergenic | 35.0% | |
| ATACCTTCATTAGGTTAGGA+AGG | + | chr8_3:57656219-57656238 | None:intergenic | 35.0% | |
| ACGTATACCTTCATTAGGTT+AGG | + | chr8_3:57656223-57656242 | None:intergenic | 35.0% | |
| CAGATACTAAGAGAAATGAC+TGG | + | chr8_3:57656405-57656424 | None:intergenic | 35.0% | |
| AATGTGTTTGACTGGTGTAA+TGG | - | chr8_3:57656772-57656791 | Msa1297390:intron | 35.0% | |
| ! | ACCCCATCTTTATGTGTTTT+TGG | - | chr8_3:57656814-57656833 | Msa1297390:intron | 35.0% |
| GCCAAAAACACATAAAGATG+GGG | + | chr8_3:57656818-57656837 | None:intergenic | 35.0% | |
| GTTGTACAAATATCTAAGGG+CGG | + | chr8_3:57656973-57656992 | None:intergenic | 35.0% | |
| ACGCAAGATTGTGATACTTA+GGG | + | chr8_3:57657222-57657241 | None:intergenic | 35.0% | |
| AACGCAAGATTGTGATACTT+AGG | + | chr8_3:57657223-57657242 | None:intergenic | 35.0% | |
| ! | GTATCACAATCTTGCGTTTT+TGG | - | chr8_3:57657225-57657244 | Msa1297390:intron | 35.0% |
| GTGCAAAAGGGTTAAACTTA+TGG | + | chr8_3:57657282-57657301 | None:intergenic | 35.0% | |
| ! | GTTTAACCCTTTTGCACTTT+TGG | - | chr8_3:57657285-57657304 | Msa1297390:intron | 35.0% |
| ! | CTAATCAAAATTGGTCTAGG+GGG | + | chr8_3:57657311-57657330 | None:intergenic | 35.0% |
| ! | CCTAATCAAAATTGGTCTAG+GGG | + | chr8_3:57657312-57657331 | None:intergenic | 35.0% |
| ! | GACCTAATCAAAATTGGTCT+AGG | + | chr8_3:57657314-57657333 | None:intergenic | 35.0% |
| TGATTAGGTCAATACATACG+TGG | - | chr8_3:57657324-57657343 | Msa1297390:intron | 35.0% | |
| TGCAAAAGAGGGTAAACTTA+GGG | - | chr8_3:57657521-57657540 | Msa1297390:intron | 35.0% | |
| ! | GTATCACAATCTTGCGATTT+TGG | + | chr8_3:57657577-57657596 | None:intergenic | 35.0% |
| GCAAGATTGTGATACTTAGA+GGG | - | chr8_3:57657582-57657601 | Msa1297390:intron | 35.0% | |
| GAAAACTGAAGCAAGAATTG+AGG | + | chr8_3:57657765-57657784 | None:intergenic | 35.0% | |
| AAGTGGAACTCAAACAATGT+TGG | - | chr8_3:57657825-57657844 | Msa1297390:intron | 35.0% | |
| ! | CGCAGGTCTATTTTATCTTA+TGG | - | chr8_3:57657922-57657941 | Msa1297390:intron | 35.0% |
| ACAACAACAACAATCAATCC+AGG | - | chr8_3:57658016-57658035 | Msa1297390:intron | 35.0% | |
| GAAGGTTTAAGGAAGAAGAA+TGG | + | chr8_3:57658128-57658147 | None:intergenic | 35.0% | |
| GAATGAAGAAGAAGAAGAAG+TGG | + | chr8_3:57658184-57658203 | None:intergenic | 35.0% | |
| AAAATCTAGGTTCGGATTTG+TGG | - | chr8_3:57658316-57658335 | Msa1297390:intron | 35.0% | |
| ! | ACGTTTTTGAATTGGGTTTC+TGG | + | chr8_3:57658375-57658394 | None:intergenic | 35.0% |
| ! | GGGTTTCACGTTTTTGAATT+GGG | + | chr8_3:57658382-57658401 | None:intergenic | 35.0% |
| ! | TGGGTTTCACGTTTTTGAAT+TGG | + | chr8_3:57658383-57658402 | None:intergenic | 35.0% |
| ! | GTTTCTAGAAGTTGGAAAAG+GGG | + | chr8_3:57658449-57658468 | None:intergenic | 35.0% |
| ! | GGTTTCTAGAAGTTGGAAAA+GGG | + | chr8_3:57658450-57658469 | None:intergenic | 35.0% |
| GAGAGAAGAAATTGGAAAAG+GGG | + | chr8_3:57658503-57658522 | None:intergenic | 35.0% | |
| CGAGAGAAGAAATTGGAAAA+GGG | + | chr8_3:57658504-57658523 | None:intergenic | 35.0% | |
| TCGAGAGAAGAAATTGGAAA+AGG | + | chr8_3:57658505-57658524 | None:intergenic | 35.0% | |
| CCTGACAACAATAAAGGATT+TGG | + | chr8_3:57658627-57658646 | None:intergenic | 35.0% | |
| CCAAATCCTTTATTGTTGTC+AGG | - | chr8_3:57658624-57658643 | Msa1297390:intron | 35.0% | |
| GATTAACGACAGTTACTTGT+TGG | - | chr8_3:57658750-57658769 | Msa1297390:intron | 35.0% | |
| GATGGACAAGACTTCAATAT+TGG | - | chr8_3:57658952-57658971 | Msa1297390:CDS | 35.0% | |
| !! | TGGCAATTTTAGAAGAAGAG+GGG | - | chr8_3:57659014-57659033 | Msa1297390:CDS | 35.0% |
| AATAACAATGTTATGGCCCT+TGG | - | chr8_3:57659256-57659275 | Msa1297390:intron | 35.0% | |
| ATAACAATGTTATGGCCCTT+GGG | - | chr8_3:57659257-57659276 | Msa1297390:intron | 35.0% | |
| TATTATCACCAGACAGCAGT+TGG | - | chr8_3:57655532-57655551 | Msa1297390:CDS | 40.0% | |
| TCAAATAACCAACTGCTGTC+TGG | + | chr8_3:57655543-57655562 | None:intergenic | 40.0% | |
| CAGCAGTTGGTTATTTGACT+TGG | - | chr8_3:57655545-57655564 | Msa1297390:CDS | 40.0% | |
| CACAATCTGTGTCATGTGAA+AGG | + | chr8_3:57655808-57655827 | None:intergenic | 40.0% | |
| CTGAGTCAAACATTGTTGCA+TGG | + | chr8_3:57655858-57655877 | None:intergenic | 40.0% | |
| CATGCAACAATGTTTGACTC+AGG | - | chr8_3:57655856-57655875 | Msa1297390:CDS | 40.0% | |
| CATTTCCTCTACTCTTAGCA+AGG | - | chr8_3:57655883-57655902 | Msa1297390:CDS | 40.0% | |
| TTCTTCCTTGCTAAGAGTAG+AGG | + | chr8_3:57655891-57655910 | None:intergenic | 40.0% | |
| !! | CCATAAAATTGGGTTGGGTT+TGG | + | chr8_3:57656022-57656041 | None:intergenic | 40.0% |
| ! | CCAAACCCAACCCAATTTTA+TGG | - | chr8_3:57656019-57656038 | Msa1297390:CDS | 40.0% |
| ! | TGCAAGAGCAATGAAGCATT+GGG | + | chr8_3:57656191-57656210 | None:intergenic | 40.0% |
| TCTCCTTCCTAACCTAATGA+AGG | - | chr8_3:57656213-57656232 | Msa1297390:intron | 40.0% | |
| CACACATGCGCTTAATAATG+TGG | - | chr8_3:57656456-57656475 | Msa1297390:intron | 40.0% | |
| AAATATCTAAGGGCGGAGTT+AGG | + | chr8_3:57656966-57656985 | None:intergenic | 40.0% | |
| GCAAGATTGTGATACTTAGG+GGG | + | chr8_3:57657220-57657239 | None:intergenic | 40.0% | |
| CGCAAGATTGTGATACTTAG+GGG | + | chr8_3:57657581-57657600 | None:intergenic | 40.0% | |
| !!! | CCCCTAGACCAATTTTGATT+AGG | - | chr8_3:57657309-57657328 | Msa1297390:intron | 40.0% |
| TCGCAAGATTGTGACACTTA+GGG | + | chr8_3:57657394-57657413 | None:intergenic | 40.0% | |
| ATCGCAAGATTGTGACACTT+AGG | + | chr8_3:57657395-57657414 | None:intergenic | 40.0% | |
| CATCCACATCACTTAAAGTG+AGG | + | chr8_3:57657455-57657474 | None:intergenic | 40.0% | |
| !! | TGCATTGACTCGGTCAAAAT+TGG | - | chr8_3:57657482-57657501 | Msa1297390:intron | 40.0% |
| ! | GTGGTCAAAAGTGCAAAAGA+GGG | - | chr8_3:57657510-57657529 | Msa1297390:intron | 40.0% |
| GTGCAAAAGAGGGTAAACTT+AGG | - | chr8_3:57657520-57657539 | Msa1297390:intron | 40.0% | |
| GCAAAAGAGGGTAAACTTAG+GGG | - | chr8_3:57657522-57657541 | Msa1297390:intron | 40.0% | |
| CAAAAGAGGGTAAACTTAGG+GGG | - | chr8_3:57657523-57657542 | Msa1297390:intron | 40.0% | |
| CGCAAGATTGTGATACTTAG+AGG | - | chr8_3:57657581-57657600 | Msa1297390:intron | 40.0% | |
| AATAGACCTGCGAAATCCAA+TGG | + | chr8_3:57657914-57657933 | None:intergenic | 40.0% | |
| GAAGATGATGAAGAAGAGTG+AGG | + | chr8_3:57657992-57658011 | None:intergenic | 40.0% | |
| GAAAATAAGGACTGCATTCC+TGG | + | chr8_3:57658037-57658056 | None:intergenic | 40.0% | |
| TGGATCGAACTAGAAGGAAA+GGG | + | chr8_3:57658164-57658183 | None:intergenic | 40.0% | |
| AAGAAGTGGATCGAACTAGA+AGG | + | chr8_3:57658170-57658189 | None:intergenic | 40.0% | |
| !!! | GTTTCTGGTTCAAGTTTTGC+TGG | + | chr8_3:57658360-57658379 | None:intergenic | 40.0% |
| ! | ATGTTTTCACGTTGTCGAAC+TGG | + | chr8_3:57658410-57658429 | None:intergenic | 40.0% |
| ! | GGGTTTCTAGAAGTTGGAAA+AGG | + | chr8_3:57658451-57658470 | None:intergenic | 40.0% |
| ! | CAAACTGGGTTTCTAGAAGT+TGG | + | chr8_3:57658457-57658476 | None:intergenic | 40.0% |
| CCTCATCCTGACAACAATAA+AGG | + | chr8_3:57658633-57658652 | None:intergenic | 40.0% | |
| CCTTTATTGTTGTCAGGATG+AGG | - | chr8_3:57658630-57658649 | Msa1297390:intron | 40.0% | |
| CGAGAACAAACGCAATTTGA+CGG | - | chr8_3:57658723-57658742 | Msa1297390:intron | 40.0% | |
| ! | AACGACAGTTACTTGTTGGA+CGG | - | chr8_3:57658754-57658773 | Msa1297390:intron | 40.0% |
| AGAAGAGGGGAAGAAATCAA+AGG | - | chr8_3:57659027-57659046 | Msa1297390:CDS | 40.0% | |
| ATCAAAGGAAGATCAGTCGA+TGG | - | chr8_3:57659042-57659061 | Msa1297390:CDS | 40.0% | |
| CACTTTCAGTTTCACAACAG+AGG | + | chr8_3:57659087-57659106 | None:intergenic | 40.0% | |
| ! | TTCCACGTTGATGAGTGATT+CGG | + | chr8_3:57659128-57659147 | None:intergenic | 40.0% |
| TAACAATGTTATGGCCCTTG+GGG | - | chr8_3:57659258-57659277 | Msa1297390:intron | 40.0% | |
| TACCATCATTGCTGAGGTAA+AGG | - | chr8_3:57659297-57659316 | Msa1297390:intron | 40.0% | |
| ATCCTTTACCTCAGCAATGA+TGG | + | chr8_3:57659302-57659321 | None:intergenic | 40.0% | |
| AGGCTACAACTTGACCATAA+AGG | - | chr8_3:57659400-57659419 | Msa1297390:intron | 40.0% | |
| !! | GTTTTGGACGAGTTCCTTTA+TGG | + | chr8_3:57659417-57659436 | None:intergenic | 40.0% |
| CTGCAAGAGCAATGAAGCAT+TGG | + | chr8_3:57656192-57656211 | None:intergenic | 45.0% | |
| GTATCCAAGACACTGGATCA+GGG | - | chr8_3:57656278-57656297 | Msa1297390:intron | 45.0% | |
| TATCCAAGACACTGGATCAG+GGG | - | chr8_3:57656279-57656298 | Msa1297390:intron | 45.0% | |
| GCAAGATTGTGACACTTAGG+GGG | + | chr8_3:57657392-57657411 | None:intergenic | 45.0% | |
| CGCAAGATTGTGACACTTAG+GGG | + | chr8_3:57657393-57657412 | None:intergenic | 45.0% | |
| GCACCTCACTTTAAGTGATG+TGG | - | chr8_3:57657449-57657468 | Msa1297390:intron | 45.0% | |
| !! | ATGACACGCATGCATTGACT+CGG | - | chr8_3:57657472-57657491 | Msa1297390:intron | 45.0% |
| !! | TGACTCGGTCAAAATTGGTC+TGG | - | chr8_3:57657487-57657506 | Msa1297390:intron | 45.0% |
| ! | GACTCGGTCAAAATTGGTCT+GGG | - | chr8_3:57657488-57657507 | Msa1297390:intron | 45.0% |
| ! | GGTGGTCAAAAGTGCAAAAG+AGG | - | chr8_3:57657509-57657528 | Msa1297390:intron | 45.0% |
| CAATGACCATTGGATTTCGC+AGG | - | chr8_3:57657905-57657924 | Msa1297390:intron | 45.0% | |
| !! | AAGGGGGAAAAGGTTGATGA+AGG | + | chr8_3:57658146-57658165 | None:intergenic | 45.0% |
| ACTAGAAGGAAAGGGGGAAA+AGG | + | chr8_3:57658156-57658175 | None:intergenic | 45.0% | |
| GATCGAACTAGAAGGAAAGG+GGG | + | chr8_3:57658162-57658181 | None:intergenic | 45.0% | |
| GGATCGAACTAGAAGGAAAG+GGG | + | chr8_3:57658163-57658182 | None:intergenic | 45.0% | |
| GTGGATCGAACTAGAAGGAA+AGG | + | chr8_3:57658165-57658184 | None:intergenic | 45.0% | |
| ! | ACGTTGTCGAACTGGTTTCT+GGG | + | chr8_3:57658402-57658421 | None:intergenic | 45.0% |
| ! | CAGTTACTTGTTGGACGGAA+AGG | - | chr8_3:57658759-57658778 | Msa1297390:intron | 45.0% |
| AAAGGAAGATCAGTCGATGG+TGG | - | chr8_3:57659045-57659064 | Msa1297390:CDS | 45.0% | |
| TCAGTTTCACAACAGAGGTC+TGG | + | chr8_3:57659082-57659101 | None:intergenic | 45.0% | |
| !! | AACGTGGAAGCAAAAGTGTC+TGG | - | chr8_3:57659139-57659158 | Msa1297390:CDS | 45.0% |
| CGACATTACCATCATTGCTG+AGG | - | chr8_3:57659291-57659310 | Msa1297390:intron | 45.0% | |
| !! | GTTTAAATTTAAAAATTAAT+AGG | + | chr8_3:57657863-57657882 | None:intergenic | 5.0% |
| !! | TTTAAAAAAAATAAATCAAA+CGG | + | chr8_3:57657885-57657904 | None:intergenic | 5.0% |
| !! | AAATTAAAGTAATTTAATAT+AGG | + | chr8_3:57658895-57658914 | None:intergenic | 5.0% |
| GGTCTGTGTCTGTTCCTCTA+AGG | + | chr8_3:57655837-57655856 | None:intergenic | 50.0% | |
| TCAGCGTCATTGCCAGAGTT+AGG | - | chr8_3:57656046-57656065 | Msa1297390:intron | 50.0% | |
| CGTATCCAAGACACTGGATC+AGG | - | chr8_3:57656277-57656296 | Msa1297390:intron | 50.0% | |
| ! | TGGTGTTGAAGGTGTGCATC+TGG | + | chr8_3:57656943-57656962 | None:intergenic | 50.0% |
| TATCTAAGGGCGGAGTTAGG+TGG | + | chr8_3:57656963-57656982 | None:intergenic | 50.0% | |
| ! | AGGGGGCCAAAAGTGCAAAA+GGG | + | chr8_3:57657294-57657313 | None:intergenic | 50.0% |
| ! | TAGGGGGCCAAAAGTGCAAA+AGG | + | chr8_3:57657295-57657314 | None:intergenic | 50.0% |
| ! | TCGGTCAAAATTGGTCTGGG+TGG | - | chr8_3:57657491-57657510 | Msa1297390:intron | 50.0% |
| ! | CACGTTGTCGAACTGGTTTC+TGG | + | chr8_3:57658403-57658422 | None:intergenic | 50.0% |
| ! | CACGTTGATGAGTGATTCGG+TGG | + | chr8_3:57659125-57659144 | None:intergenic | 50.0% |
| CACCGAATCACTCATCAACG+TGG | - | chr8_3:57659123-57659142 | Msa1297390:CDS | 50.0% | |
| GTCGACGATAGAATCCCCAA+GGG | + | chr8_3:57659275-57659294 | None:intergenic | 50.0% | |
| TGTCGACGATAGAATCCCCA+AGG | + | chr8_3:57659276-57659295 | None:intergenic | 50.0% | |
| ACTCGTCCAAAACCTACGCA+TGG | - | chr8_3:57659424-57659443 | Msa1297390:intron | 50.0% | |
| ! | ATGCTGCCATGCGTAGGTTT+TGG | + | chr8_3:57659433-57659452 | None:intergenic | 50.0% |
| ACTTCAATGCTGCCATGCGT+AGG | + | chr8_3:57659439-57659458 | None:intergenic | 50.0% | |
| GCAGTGCGTATCCAAGACAC+TGG | - | chr8_3:57656271-57656290 | Msa1297390:intron | 55.0% | |
| ! | GCGGAGTTAGGTGGTGTTGA+AGG | + | chr8_3:57656954-57656973 | None:intergenic | 55.0% |
| GCGCCCCTGATCCAGTGTCT+TGG | + | chr8_3:57656285-57656304 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 57655525 | 57659475 | 57655525 | ID=Msa1297390;Name=Msa1297390 |
| chr8_3 | mRNA | 57655525 | 57659475 | 57655525 | ID=Msa1297390-mRNA-1;Parent=Msa1297390;Name=Msa1297390-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|0.8|0.5|0.6|5|0|271 |
| chr8_3 | exon | 57659470 | 57659475 | 57659470 | ID=Msa1297390-mRNA-1:exon:16518;Parent=Msa1297390-mRNA-1 |
| chr8_3 | exon | 57658847 | 57659239 | 57658847 | ID=Msa1297390-mRNA-1:exon:16517;Parent=Msa1297390-mRNA-1 |
| chr8_3 | exon | 57655790 | 57656038 | 57655790 | ID=Msa1297390-mRNA-1:exon:16516;Parent=Msa1297390-mRNA-1 |
| chr8_3 | exon | 57655688 | 57655771 | 57655688 | ID=Msa1297390-mRNA-1:exon:16515;Parent=Msa1297390-mRNA-1 |
| chr8_3 | exon | 57655525 | 57655608 | 57655525 | ID=Msa1297390-mRNA-1:exon:16514;Parent=Msa1297390-mRNA-1 |
| chr8_3 | CDS | 57659470 | 57659475 | 57659470 | ID=Msa1297390-mRNA-1:cds;Parent=Msa1297390-mRNA-1 |
| chr8_3 | CDS | 57658847 | 57659239 | 57658847 | ID=Msa1297390-mRNA-1:cds;Parent=Msa1297390-mRNA-1 |
| chr8_3 | CDS | 57655790 | 57656038 | 57655790 | ID=Msa1297390-mRNA-1:cds;Parent=Msa1297390-mRNA-1 |
| chr8_3 | CDS | 57655688 | 57655771 | 57655688 | ID=Msa1297390-mRNA-1:cds;Parent=Msa1297390-mRNA-1 |
| chr8_3 | CDS | 57655525 | 57655608 | 57655525 | ID=Msa1297390-mRNA-1:cds;Parent=Msa1297390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
