Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1253750 | XP_003629109.2 | 94.432 | 449 | 24 | 1 | 1 | 448 | 1 | 449 | 0.0 | 848 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1253750 | sp|Q8GYH5|BAD1_ARATH | 40.850 | 306 | 172 | 3 | 7 | 305 | 1 | 304 | 1.10e-73 | 240 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa1253750 | 0.812023 | 5.222930e-51 | -8.615850e-47 |
| Msa0632980 | Msa1253750 | 0.802615 | 5.157601e-49 | -8.615850e-47 |
| Msa0661440 | Msa1253750 | 0.801035 | 1.088790e-48 | -8.615850e-47 |
| Msa0150920 | Msa1253750 | 0.802856 | 4.600508e-49 | -8.615850e-47 |
| Msa1225850 | Msa1253750 | 0.810663 | 1.030797e-50 | -8.615850e-47 |
| Msa1253750 | Msa1294020 | 0.839477 | 1.547796e-57 | -8.615850e-47 |
| Msa1253750 | Msa1297390 | 0.810138 | 1.338108e-50 | -8.615850e-47 |
| Msa1253750 | Msa1319010 | 0.803840 | 2.876780e-49 | -8.615850e-47 |
| Msa1253750 | Msa1350870 | 0.820371 | 7.105778e-53 | -8.615850e-47 |
| Msa1253750 | Msa1406840 | 0.811082 | 8.364909e-51 | -8.615850e-47 |
| Msa1253750 | Msa1429550 | 0.809725 | 1.641970e-50 | -8.615850e-47 |
| Msa0987640 | Msa1253750 | 0.820051 | 8.412270e-53 | -8.615850e-47 |
| Msa1100030 | Msa1253750 | 0.803216 | 3.875510e-49 | -8.615850e-47 |
| Msa0272210 | Msa1253750 | 0.801479 | 8.831661e-49 | -8.615850e-47 |
| Msa1147030 | Msa1253750 | 0.809476 | 1.856818e-50 | -8.615850e-47 |
| Msa1148210 | Msa1253750 | 0.818733 | 1.679843e-52 | -8.615850e-47 |
| Msa1156240 | Msa1253750 | 0.803053 | 4.187323e-49 | -8.615850e-47 |
| Msa0536770 | Msa1253750 | 0.804688 | 1.915733e-49 | -8.615850e-47 |
| Msa0580100 | Msa1253750 | 0.803543 | 3.315526e-49 | -8.615850e-47 |
| Msa0591490 | Msa1253750 | 0.823501 | 1.339054e-53 | -8.615850e-47 |
| Msa0594630 | Msa1253750 | 0.812280 | 4.589792e-51 | -8.615850e-47 |
| Msa0894040 | Msa1253750 | 0.816951 | 4.243529e-52 | -8.615850e-47 |
| Msa0896920 | Msa1253750 | 0.815191 | 1.048839e-51 | -8.615850e-47 |
| Msa0921180 | Msa1253750 | 0.807957 | 3.920618e-50 | -8.615850e-47 |
| Msa0959240 | Msa1253750 | 0.829256 | 5.698615e-55 | -8.615850e-47 |
| Msa0959700 | Msa1253750 | 0.808951 | 2.405694e-50 | -8.615850e-47 |
| Msa0967190 | Msa1253750 | 0.844271 | 8.382908e-59 | -8.615850e-47 |
| Msa0967200 | Msa1253750 | 0.830631 | 2.634811e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1253750 | MtrunA17_Chr8g0370361 | 94.432 | 449 | 24 | 1 | 1 | 448 | 1 | 449 | 0.0 | 848 |
| Msa1253750 | MtrunA17_Chr3g0083331 | 56.823 | 447 | 163 | 7 | 1 | 428 | 1 | 436 | 6.41e-170 | 484 |
| Msa1253750 | MtrunA17_Chr8g0369921 | 56.726 | 446 | 185 | 5 | 1 | 443 | 1 | 441 | 1.35e-167 | 478 |
| Msa1253750 | MtrunA17_Chr7g0233331 | 62.532 | 387 | 139 | 4 | 10 | 391 | 8 | 393 | 1.26e-164 | 469 |
| Msa1253750 | MtrunA17_Chr8g0353311 | 60.837 | 406 | 149 | 6 | 1 | 396 | 1 | 406 | 3.53e-162 | 464 |
| Msa1253750 | MtrunA17_Chr1g0178581 | 57.547 | 424 | 174 | 2 | 10 | 429 | 11 | 432 | 1.36e-161 | 463 |
| Msa1253750 | MtrunA17_Chr8g0367671 | 59.949 | 392 | 150 | 4 | 10 | 395 | 11 | 401 | 2.19e-158 | 454 |
| Msa1253750 | MtrunA17_Chr8g0361991 | 52.392 | 439 | 187 | 5 | 1 | 424 | 1 | 432 | 5.10e-147 | 426 |
| Msa1253750 | MtrunA17_Chr8g0364031 | 55.300 | 434 | 179 | 7 | 1 | 429 | 1 | 424 | 1.05e-145 | 422 |
| Msa1253750 | MtrunA17_Chr7g0221531 | 54.684 | 395 | 164 | 5 | 1 | 388 | 1 | 387 | 2.57e-145 | 421 |
| Msa1253750 | MtrunA17_Chr3g0093531 | 58.974 | 351 | 138 | 3 | 53 | 397 | 1 | 351 | 5.71e-138 | 400 |
| Msa1253750 | MtrunA17_Chr8g0354071 | 58.405 | 351 | 140 | 3 | 53 | 397 | 1 | 351 | 9.95e-138 | 400 |
| Msa1253750 | MtrunA17_Chr3g0136651 | 44.858 | 457 | 210 | 8 | 4 | 448 | 1 | 427 | 7.06e-128 | 377 |
| Msa1253750 | MtrunA17_Chr8g0368621 | 61.022 | 313 | 119 | 3 | 4 | 315 | 1 | 311 | 3.86e-125 | 365 |
| Msa1253750 | MtrunA17_Chr8g0366431 | 52.727 | 330 | 149 | 5 | 99 | 424 | 20 | 346 | 3.64e-109 | 327 |
| Msa1253750 | MtrunA17_Chr8g0370371 | 70.213 | 188 | 47 | 3 | 268 | 448 | 1 | 186 | 1.11e-83 | 255 |
| Msa1253750 | MtrunA17_Chr8g0370381 | 72.619 | 168 | 24 | 2 | 53 | 206 | 1 | 160 | 1.17e-80 | 247 |
| Msa1253750 | MtrunA17_Chr7g0262761 | 29.630 | 189 | 120 | 4 | 14 | 197 | 15 | 195 | 1.19e-20 | 90.1 |
| Msa1253750 | MtrunA17_Chr7g0262731 | 26.818 | 220 | 147 | 3 | 14 | 228 | 12 | 222 | 1.22e-19 | 91.7 |
| Msa1253750 | MtrunA17_Chr1g0182731 | 34.211 | 114 | 75 | 0 | 14 | 127 | 21 | 134 | 3.14e-19 | 84.0 |
| Msa1253750 | MtrunA17_Chr7g0276681 | 26.829 | 287 | 176 | 7 | 46 | 310 | 119 | 393 | 6.67e-19 | 89.4 |
| Msa1253750 | MtrunA17_Chr2g0331201 | 28.767 | 219 | 136 | 4 | 39 | 248 | 134 | 341 | 1.67e-18 | 88.2 |
| Msa1253750 | MtrunA17_Chr1g0212971 | 26.421 | 299 | 179 | 6 | 46 | 318 | 169 | 452 | 1.85e-18 | 88.2 |
| Msa1253750 | MtrunA17_Chr1g0161231 | 26.149 | 348 | 186 | 12 | 46 | 358 | 94 | 405 | 2.55e-17 | 84.3 |
| Msa1253750 | MtrunA17_Chr2g0327711 | 24.332 | 337 | 209 | 9 | 47 | 358 | 105 | 420 | 7.69e-16 | 79.7 |
| Msa1253750 | MtrunA17_Chr2g0331191 | 27.189 | 217 | 138 | 4 | 42 | 249 | 137 | 342 | 1.12e-15 | 79.3 |
| Msa1253750 | MtrunA17_Chr4g0030551 | 23.739 | 337 | 211 | 9 | 47 | 358 | 109 | 424 | 2.58e-15 | 78.2 |
| Msa1253750 | MtrunA17_Chr7g0263471 | 26.101 | 318 | 181 | 12 | 44 | 311 | 124 | 437 | 8.80e-15 | 76.6 |
| Msa1253750 | MtrunA17_Chr8g0391711 | 23.907 | 343 | 200 | 10 | 46 | 358 | 101 | 412 | 6.47e-14 | 73.9 |
| Msa1253750 | MtrunA17_Chr7g0263421 | 24.653 | 288 | 182 | 5 | 46 | 310 | 87 | 362 | 1.07e-13 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1253750 | AT4G10720.1 | 39.911 | 451 | 231 | 10 | 7 | 437 | 1 | 431 | 5.39e-104 | 317 |
| Msa1253750 | AT4G10720.2 | 41.294 | 402 | 200 | 5 | 7 | 391 | 1 | 383 | 2.70e-97 | 298 |
| Msa1253750 | AT1G14500.1 | 38.806 | 402 | 214 | 5 | 7 | 395 | 1 | 383 | 3.44e-91 | 283 |
| Msa1253750 | AT1G14480.1 | 36.842 | 418 | 232 | 6 | 7 | 407 | 1 | 403 | 1.13e-84 | 267 |
| Msa1253750 | AT5G15500.2 | 39.947 | 378 | 212 | 5 | 11 | 380 | 6 | 376 | 2.13e-81 | 259 |
| Msa1253750 | AT5G54620.1 | 42.308 | 312 | 167 | 4 | 7 | 308 | 1 | 309 | 7.76e-77 | 246 |
| Msa1253750 | AT5G54610.1 | 40.850 | 306 | 172 | 3 | 7 | 305 | 1 | 304 | 1.12e-74 | 240 |
| Msa1253750 | AT1G14480.2 | 33.333 | 414 | 221 | 7 | 7 | 413 | 1 | 366 | 7.18e-65 | 214 |
| Msa1253750 | AT5G15500.1 | 35.018 | 277 | 165 | 5 | 112 | 380 | 1 | 270 | 4.79e-41 | 150 |
| Msa1253750 | AT5G51160.1 | 30.605 | 281 | 163 | 6 | 59 | 317 | 31 | 301 | 3.16e-36 | 139 |
| Msa1253750 | AT1G10340.2 | 24.648 | 426 | 214 | 14 | 11 | 365 | 75 | 464 | 2.32e-17 | 85.1 |
| Msa1253750 | AT1G10340.1 | 24.884 | 430 | 212 | 15 | 11 | 365 | 75 | 468 | 3.89e-17 | 84.3 |
| Msa1253750 | AT3G09550.2 | 26.460 | 291 | 173 | 7 | 47 | 311 | 189 | 464 | 6.76e-17 | 83.6 |
| Msa1253750 | AT3G09550.1 | 26.460 | 291 | 173 | 7 | 47 | 311 | 182 | 457 | 7.18e-17 | 83.6 |
| Msa1253750 | AT3G09550.3 | 26.460 | 291 | 173 | 7 | 47 | 311 | 182 | 457 | 7.18e-17 | 83.6 |
| Msa1253750 | AT1G05640.1 | 25.784 | 287 | 179 | 6 | 46 | 310 | 191 | 465 | 4.06e-16 | 81.3 |
| Msa1253750 | AT1G34050.1 | 24.265 | 272 | 184 | 6 | 55 | 314 | 162 | 423 | 7.11e-16 | 80.5 |
| Msa1253750 | AT5G02620.4 | 25.430 | 291 | 178 | 6 | 47 | 310 | 95 | 373 | 7.92e-16 | 80.1 |
| Msa1253750 | AT5G02620.1 | 25.430 | 291 | 178 | 6 | 47 | 310 | 95 | 373 | 7.92e-16 | 80.1 |
| Msa1253750 | AT5G02620.3 | 25.430 | 291 | 178 | 6 | 47 | 310 | 95 | 373 | 7.92e-16 | 80.1 |
| Msa1253750 | AT2G24600.3 | 24.586 | 423 | 228 | 16 | 8 | 365 | 72 | 468 | 1.14e-15 | 79.7 |
| Msa1253750 | AT2G24600.4 | 24.586 | 423 | 228 | 16 | 8 | 365 | 72 | 468 | 1.14e-15 | 79.7 |
| Msa1253750 | AT5G54700.2 | 27.875 | 287 | 149 | 11 | 97 | 378 | 17 | 250 | 2.09e-15 | 77.8 |
| Msa1253750 | AT2G24600.2 | 27.698 | 278 | 160 | 9 | 70 | 314 | 163 | 432 | 2.66e-15 | 78.6 |
| Msa1253750 | AT2G24600.1 | 27.698 | 278 | 160 | 9 | 70 | 314 | 163 | 432 | 2.66e-15 | 78.6 |
| Msa1253750 | AT5G54700.1 | 26.377 | 345 | 163 | 11 | 26 | 365 | 20 | 278 | 2.80e-15 | 78.2 |
| Msa1253750 | AT2G31820.1 | 24.739 | 287 | 182 | 7 | 46 | 310 | 227 | 501 | 2.92e-15 | 78.6 |
| Msa1253750 | AT2G01680.1 | 24.194 | 310 | 197 | 7 | 46 | 329 | 97 | 394 | 3.68e-15 | 78.2 |
| Msa1253750 | AT3G12360.1 | 23.896 | 385 | 194 | 14 | 44 | 365 | 130 | 478 | 9.33e-15 | 77.0 |
| Msa1253750 | AT3G12360.2 | 23.896 | 385 | 194 | 14 | 44 | 365 | 118 | 466 | 1.12e-14 | 76.6 |
| Msa1253750 | AT4G03500.1 | 22.549 | 306 | 178 | 7 | 45 | 311 | 217 | 502 | 1.59e-14 | 76.3 |
| Msa1253750 | AT4G03500.2 | 22.549 | 306 | 178 | 7 | 45 | 311 | 194 | 479 | 1.63e-14 | 76.3 |
| Msa1253750 | AT4G03500.3 | 22.549 | 306 | 178 | 7 | 45 | 311 | 194 | 479 | 1.63e-14 | 76.3 |
| Msa1253750 | AT5G54710.1 | 26.690 | 281 | 157 | 11 | 67 | 314 | 187 | 451 | 2.81e-14 | 75.5 |
| Msa1253750 | AT5G54710.2 | 26.690 | 281 | 157 | 11 | 67 | 314 | 232 | 496 | 2.92e-14 | 75.5 |
| Msa1253750 | AT5G50140.1 | 27.317 | 205 | 123 | 5 | 42 | 230 | 26 | 220 | 3.25e-14 | 75.1 |
| Msa1253750 | AT4G03490.4 | 25.879 | 313 | 161 | 12 | 45 | 311 | 180 | 467 | 7.50e-14 | 74.3 |
| Msa1253750 | AT4G03490.5 | 25.879 | 313 | 161 | 12 | 45 | 311 | 170 | 457 | 8.16e-14 | 73.9 |
| Msa1253750 | AT4G03490.3 | 25.879 | 313 | 161 | 12 | 45 | 311 | 180 | 467 | 1.29e-13 | 73.6 |
| Msa1253750 | AT4G03460.2 | 26.141 | 241 | 124 | 7 | 96 | 316 | 252 | 458 | 2.99e-13 | 72.4 |
| Msa1253750 | AT4G03460.1 | 26.141 | 241 | 124 | 7 | 96 | 316 | 284 | 490 | 3.13e-13 | 72.4 |
| Msa1253750 | AT5G02620.5 | 23.885 | 314 | 177 | 7 | 47 | 310 | 95 | 396 | 1.72e-12 | 69.7 |
| Msa1253750 | AT5G02620.2 | 23.885 | 314 | 177 | 7 | 47 | 310 | 95 | 396 | 1.72e-12 | 69.7 |
| Msa1253750 | AT4G03480.1 | 22.917 | 288 | 170 | 8 | 47 | 311 | 360 | 618 | 1.23e-11 | 67.4 |
| Msa1253750 | AT4G03480.2 | 22.917 | 288 | 170 | 8 | 47 | 311 | 357 | 615 | 1.28e-11 | 67.4 |
| Msa1253750 | AT1G03670.1 | 21.805 | 399 | 230 | 12 | 62 | 412 | 234 | 598 | 2.94e-11 | 65.9 |
| Msa1253750 | AT5G60070.1 | 22.742 | 299 | 208 | 6 | 13 | 310 | 114 | 390 | 3.82e-11 | 65.5 |
Find 78 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAACATCTTCGATCGAATT+TGG | 0.197403 | 8_2:+51422876 | None:intergenic |
| TCATAATTTCAGTGGCAAAT+TGG | 0.236402 | 8_2:+51423111 | None:intergenic |
| GAAATTAATACTTAATTATA+AGG | 0.240344 | 8_2:-51422739 | Msa1253750:CDS |
| AGCACTAAACAATGACTTAA+AGG | 0.246988 | 8_2:-51422685 | Msa1253750:intron |
| CACCACTTCTTTGATTTCTA+AGG | 0.264459 | 8_2:-51421859 | Msa1253750:CDS |
| TCTACATATAGCTGCATCTA+TGG | 0.264612 | 8_2:-51423141 | Msa1253750:CDS |
| TGAGGAGGATCCATATGTTT+TGG | 0.280435 | 8_2:-51423198 | Msa1253750:CDS |
| TATTGTTCACACCAATCTTT+TGG | 0.280558 | 8_2:-51421713 | Msa1253750:CDS |
| TTGACACCAAGTGGGTTAAT+AGG | 0.295930 | 8_2:-51421741 | Msa1253750:CDS |
| TACAAGAGACTTAAGGTTAA+TGG | 0.307082 | 8_2:-51421561 | Msa1253750:CDS |
| TAGTAATATACCTTTGATTT+CGG | 0.315186 | 8_2:+51422133 | None:intergenic |
| AGGATAGAGAAATCAAAATT+AGG | 0.319436 | 8_2:-51421536 | Msa1253750:CDS |
| CTTTGCATTCAAATTTATCT+TGG | 0.330771 | 8_2:+51422196 | None:intergenic |
| ATAGATTAGGAGGAAATAAA+TGG | 0.333490 | 8_2:-51421512 | Msa1253750:CDS |
| CTCTTCATGTCTTGGTTGGT+TGG | 0.334379 | 8_2:-51422800 | Msa1253750:CDS |
| AACGAAGCACCATACTCTTT+TGG | 0.338315 | 8_2:+51423015 | None:intergenic |
| TCTTAATTTATCTTCAAGTT+TGG | 0.340656 | 8_2:+51422070 | None:intergenic |
| TCGTTTCGTAGACATGAATA+AGG | 0.350127 | 8_2:-51422997 | Msa1253750:CDS |
| TTCAACTTTCAACTTAGTTA+TGG | 0.392441 | 8_2:-51421637 | Msa1253750:CDS |
| TCTATATATTCCAAAACATA+TGG | 0.396171 | 8_2:+51423188 | None:intergenic |
| GCAAAACAACCAAAAGAGTA+TGG | 0.398876 | 8_2:-51423024 | Msa1253750:CDS |
| GATTGAAACCTTCATTTGCT+TGG | 0.413951 | 8_2:-51423088 | Msa1253750:CDS |
| GTTTGAAGCTCTTCATGTCT+TGG | 0.417575 | 8_2:-51422808 | Msa1253750:CDS |
| GAAGCTCTTCATGTCTTGGT+TGG | 0.429930 | 8_2:-51422804 | Msa1253750:CDS |
| ATCAAAATTAGGAATAGATT+AGG | 0.430805 | 8_2:-51421525 | Msa1253750:CDS |
| TATTGTGTACAAGAGACTTA+AGG | 0.437095 | 8_2:-51421568 | Msa1253750:CDS |
| TCTTGCACTCTAGTGTGTAT+TGG | 0.440713 | 8_2:-51421599 | Msa1253750:CDS |
| GTGAAGGTTGCAACTCTAGA+AGG | 0.445366 | 8_2:-51423248 | Msa1253750:CDS |
| ATTGTTATGTCTATAATATG+AGG | 0.459017 | 8_2:-51421683 | Msa1253750:CDS |
| TCTTTGATTTCTAAGGAAGT+TGG | 0.463599 | 8_2:-51421852 | Msa1253750:CDS |
| CCAACTCCCTAGCACCTCTC+TGG | 0.465296 | 8_2:+51422763 | None:intergenic |
| CTTAATTATAAGGATGAGAA+AGG | 0.474353 | 8_2:-51422729 | Msa1253750:CDS |
| AAGGAACTTGTTAGAATCAA+AGG | 0.479455 | 8_2:-51422978 | Msa1253750:CDS |
| TGTAGAGGAGTTTCAACAAA+TGG | 0.480280 | 8_2:+51423158 | None:intergenic |
| CTTCATCTTGCTTGTCAAAG+TGG | 0.481775 | 8_2:-51422936 | Msa1253750:CDS |
| AAAGTTGAAGTGGCAGAGGT+AGG | 0.486315 | 8_2:+51421651 | None:intergenic |
| TTCACAGGCGCTTCGACTGT+TGG | 0.486468 | 8_2:-51422225 | Msa1253750:intron |
| CCAGAGAGGTGCTAGGGAGT+TGG | 0.487334 | 8_2:-51422763 | Msa1253750:CDS |
| CAATAAGCAAACCAAAAGAT+TGG | 0.499253 | 8_2:+51421702 | None:intergenic |
| TTTAGCTTCCAAGCAAATGA+AGG | 0.500060 | 8_2:+51423080 | None:intergenic |
| TCAATCAGCACTGAGTCCCC+CGG | 0.508837 | 8_2:-51421928 | Msa1253750:CDS |
| GTTGAAAGTTGAAGTGGCAG+AGG | 0.510110 | 8_2:+51421647 | None:intergenic |
| GGTAAATCAGTTATTTCTGA+AGG | 0.526141 | 8_2:-51421831 | Msa1253750:CDS |
| TTCCTTAGAAATCAAAGAAG+TGG | 0.529376 | 8_2:+51421857 | None:intergenic |
| AACTAAGTTGAAAGTTGAAG+TGG | 0.534230 | 8_2:+51421641 | None:intergenic |
| CAAATCGCCAGAGAGGTGCT+AGG | 0.534314 | 8_2:-51422770 | Msa1253750:CDS |
| AAAATTAGGAATAGATTAGG+AGG | 0.536169 | 8_2:-51421522 | Msa1253750:CDS |
| GTTAGAATCAAAGGAAGGGA+AGG | 0.542029 | 8_2:-51422969 | Msa1253750:CDS |
| CTACATATAGCTGCATCTAT+GGG | 0.543890 | 8_2:-51423140 | Msa1253750:CDS |
| AAATCGCCAGAGAGGTGCTA+GGG | 0.545317 | 8_2:-51422769 | Msa1253750:CDS |
| GGAGTTTATCAAGGTAATGC+AGG | 0.545578 | 8_2:-51421903 | Msa1253750:CDS |
| CCTTCTCTATACACTAATTG+AGG | 0.550283 | 8_2:-51423216 | Msa1253750:CDS |
| TTTCAATCTCATAATTTCAG+TGG | 0.552567 | 8_2:+51423103 | None:intergenic |
| AAAGGTATATTACTAAGTAC+CGG | 0.559011 | 8_2:-51422125 | Msa1253750:CDS |
| CTTTGACAAGCAAGATGAAG+AGG | 0.564320 | 8_2:+51422939 | None:intergenic |
| GAGACTTAAGGTTAATGGAA+AGG | 0.568864 | 8_2:-51421556 | Msa1253750:CDS |
| GATCGAAGATGTTACTCTGA+GGG | 0.576263 | 8_2:-51422868 | Msa1253750:CDS |
| CCTCAATTAGTGTATAGAGA+AGG | 0.577645 | 8_2:+51423216 | None:intergenic |
| TTACCTTGATAAACTCCACC+CGG | 0.577693 | 8_2:+51421909 | None:intergenic |
| AAACCACCTATTAACCCACT+TGG | 0.581478 | 8_2:+51421735 | None:intergenic |
| AACTTGTTAGAATCAAAGGA+AGG | 0.583415 | 8_2:-51422974 | Msa1253750:CDS |
| ACACCAAGTGGGTTAATAGG+TGG | 0.595463 | 8_2:-51421738 | Msa1253750:CDS |
| TACCTTGATAAACTCCACCC+GGG | 0.596191 | 8_2:+51421910 | None:intergenic |
| GCTTGGAAGCTAAATCAACA+AGG | 0.604414 | 8_2:-51423071 | Msa1253750:CDS |
| ACTTGTTAGAATCAAAGGAA+GGG | 0.615429 | 8_2:-51422973 | Msa1253750:CDS |
| GCAGCAAGTGCCGAAATCAA+AGG | 0.623625 | 8_2:-51422143 | Msa1253750:CDS |
| TGATATTGATTACAAAGTGA+AGG | 0.624755 | 8_2:-51423264 | Msa1253750:CDS |
| CTTGGAAGCTAAATCAACAA+GGG | 0.626538 | 8_2:-51423070 | Msa1253750:CDS |
| ATAGATGCAGCTATATGTAG+AGG | 0.636129 | 8_2:+51423143 | None:intergenic |
| TGTCAAAAGATATATTGTCA+AGG | 0.637384 | 8_2:+51421758 | None:intergenic |
| CGATCGAAGATGTTACTCTG+AGG | 0.644610 | 8_2:-51422869 | Msa1253750:CDS |
| ATCGAAGATGTTACTCTGAG+GGG | 0.654189 | 8_2:-51422867 | Msa1253750:CDS |
| ACCTTGATAAACTCCACCCG+GGG | 0.654647 | 8_2:+51421911 | None:intergenic |
| TCTCTATACACTAATTGAGG+AGG | 0.662445 | 8_2:-51423213 | Msa1253750:CDS |
| TATTAGAAAAGATATATCAG+AGG | 0.690330 | 8_2:-51422003 | Msa1253750:CDS |
| AAGTGTATTCAAAATTGACA+AGG | 0.690636 | 8_2:+51421797 | None:intergenic |
| TTGAAGACAAATCGCCAGAG+AGG | 0.694700 | 8_2:-51422777 | Msa1253750:CDS |
| CCTTGATAAACTCCACCCGG+GGG | 0.743301 | 8_2:+51421912 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAATTAATACTTAATTATA+AGG | - | chr8_2:51422048-51422067 | Msa1253750:CDS | 10.0% |
| !! | GAAATTAATACTTAATTATA+AGG | - | chr8_2:51422048-51422067 | Msa1253750:CDS | 10.0% |
| !! | TCTATATATTCCAAAACATA+TGG | + | chr8_2:51421602-51421621 | None:intergenic | 20.0% |
| !! | CAAATAAAAAGTTAGCTAAA+AGG | + | chr8_2:51421886-51421905 | None:intergenic | 20.0% |
| !!! | TATTTTTCGATGAATAACTA+TGG | - | chr8_2:51422147-51422166 | Msa1253750:CDS | 20.0% |
| !! | AAAAAAAAAAAAACGAGACA+TGG | + | chr8_2:51422209-51422228 | None:intergenic | 20.0% |
| !!! | ATGTCTCGTTTTTTTTTTTT+TGG | - | chr8_2:51422208-51422227 | Msa1253750:CDS | 20.0% |
| !! | ACAAATAAAGAGATATAAAG+AGG | + | chr8_2:51422390-51422409 | None:intergenic | 20.0% |
| !!! | ATAACAACTATTTTATTCAC+AGG | - | chr8_2:51422547-51422566 | Msa1253750:intron | 20.0% |
| !!! | TAGTAATATACCTTTGATTT+CGG | + | chr8_2:51422657-51422676 | None:intergenic | 20.0% |
| !!! | TCTTAATTTATCTTCAAGTT+TGG | + | chr8_2:51422720-51422739 | None:intergenic | 20.0% |
| !! | TATTAGAAAAGATATATCAG+AGG | - | chr8_2:51422784-51422803 | Msa1253750:CDS | 20.0% |
| !! | ATTGTTATGTCTATAATATG+AGG | - | chr8_2:51423104-51423123 | Msa1253750:CDS | 20.0% |
| !! | ATCAAAATTAGGAATAGATT+AGG | - | chr8_2:51423262-51423281 | Msa1253750:CDS | 20.0% |
| !! | TCTATATATTCCAAAACATA+TGG | + | chr8_2:51421602-51421621 | None:intergenic | 20.0% |
| !! | CAAATAAAAAGTTAGCTAAA+AGG | + | chr8_2:51421886-51421905 | None:intergenic | 20.0% |
| !!! | TATTTTTCGATGAATAACTA+TGG | - | chr8_2:51422147-51422166 | Msa1253750:CDS | 20.0% |
| !! | AAAAAAAAAAAAACGAGACA+TGG | + | chr8_2:51422209-51422228 | None:intergenic | 20.0% |
| !!! | ATGTCTCGTTTTTTTTTTTT+TGG | - | chr8_2:51422208-51422227 | Msa1253750:CDS | 20.0% |
| !! | ACAAATAAAGAGATATAAAG+AGG | + | chr8_2:51422390-51422409 | None:intergenic | 20.0% |
| !!! | ATAACAACTATTTTATTCAC+AGG | - | chr8_2:51422547-51422566 | Msa1253750:intron | 20.0% |
| !!! | TAGTAATATACCTTTGATTT+CGG | + | chr8_2:51422657-51422676 | None:intergenic | 20.0% |
| !!! | TCTTAATTTATCTTCAAGTT+TGG | + | chr8_2:51422720-51422739 | None:intergenic | 20.0% |
| !! | TATTAGAAAAGATATATCAG+AGG | - | chr8_2:51422784-51422803 | Msa1253750:CDS | 20.0% |
| !! | ATTGTTATGTCTATAATATG+AGG | - | chr8_2:51423104-51423123 | Msa1253750:CDS | 20.0% |
| !! | ATCAAAATTAGGAATAGATT+AGG | - | chr8_2:51423262-51423281 | Msa1253750:CDS | 20.0% |
| !! | TGATATTGATTACAAAGTGA+AGG | - | chr8_2:51421523-51421542 | Msa1253750:CDS | 25.0% |
| ! | TTTCAATCTCATAATTTCAG+TGG | + | chr8_2:51421687-51421706 | None:intergenic | 25.0% |
| ! | CTTAATTATAAGGATGAGAA+AGG | - | chr8_2:51422058-51422077 | Msa1253750:CDS | 25.0% |
| !!! | TCTCGTTTTTTTTTTTTTGG+AGG | - | chr8_2:51422211-51422230 | Msa1253750:CDS | 25.0% |
| !!! | CTCGTTTTTTTTTTTTTGGA+GGG | - | chr8_2:51422212-51422231 | Msa1253750:CDS | 25.0% |
| !!! | ATATAGTCCTAGTTTTTTGA+CGG | + | chr8_2:51422309-51422328 | None:intergenic | 25.0% |
| !!! | GATATGTTAGTTCTAAATTG+AGG | - | chr8_2:51422450-51422469 | Msa1253750:intron | 25.0% |
| ! | CTTTGCATTCAAATTTATCT+TGG | + | chr8_2:51422594-51422613 | None:intergenic | 25.0% |
| !! | AAAGGTATATTACTAAGTAC+CGG | - | chr8_2:51422662-51422681 | Msa1253750:intron | 25.0% |
| !! | AAGATCAAATGTCACATTTT+TGG | - | chr8_2:51422736-51422755 | Msa1253750:CDS | 25.0% |
| ! | AAGTGTATTCAAAATTGACA+AGG | + | chr8_2:51422993-51423012 | None:intergenic | 25.0% |
| ! | TGTCAAAAGATATATTGTCA+AGG | + | chr8_2:51423032-51423051 | None:intergenic | 25.0% |
| ! | TTCAACTTTCAACTTAGTTA+TGG | - | chr8_2:51423150-51423169 | Msa1253750:CDS | 25.0% |
| ! | AGGATAGAGAAATCAAAATT+AGG | - | chr8_2:51423251-51423270 | Msa1253750:CDS | 25.0% |
| ! | AAAATTAGGAATAGATTAGG+AGG | - | chr8_2:51423265-51423284 | Msa1253750:CDS | 25.0% |
| ! | ATAGATTAGGAGGAAATAAA+TGG | - | chr8_2:51423275-51423294 | Msa1253750:CDS | 25.0% |
| !! | TGATATTGATTACAAAGTGA+AGG | - | chr8_2:51421523-51421542 | Msa1253750:CDS | 25.0% |
| ! | TTTCAATCTCATAATTTCAG+TGG | + | chr8_2:51421687-51421706 | None:intergenic | 25.0% |
| ! | CTTAATTATAAGGATGAGAA+AGG | - | chr8_2:51422058-51422077 | Msa1253750:CDS | 25.0% |
| !!! | TCTCGTTTTTTTTTTTTTGG+AGG | - | chr8_2:51422211-51422230 | Msa1253750:CDS | 25.0% |
| !!! | CTCGTTTTTTTTTTTTTGGA+GGG | - | chr8_2:51422212-51422231 | Msa1253750:CDS | 25.0% |
| !!! | ATATAGTCCTAGTTTTTTGA+CGG | + | chr8_2:51422309-51422328 | None:intergenic | 25.0% |
| !!! | GATATGTTAGTTCTAAATTG+AGG | - | chr8_2:51422450-51422469 | Msa1253750:intron | 25.0% |
| ! | CTTTGCATTCAAATTTATCT+TGG | + | chr8_2:51422594-51422613 | None:intergenic | 25.0% |
| !! | AAAGGTATATTACTAAGTAC+CGG | - | chr8_2:51422662-51422681 | Msa1253750:intron | 25.0% |
| !! | AAGATCAAATGTCACATTTT+TGG | - | chr8_2:51422736-51422755 | Msa1253750:CDS | 25.0% |
| ! | AAGTGTATTCAAAATTGACA+AGG | + | chr8_2:51422993-51423012 | None:intergenic | 25.0% |
| ! | TGTCAAAAGATATATTGTCA+AGG | + | chr8_2:51423032-51423051 | None:intergenic | 25.0% |
| ! | TTCAACTTTCAACTTAGTTA+TGG | - | chr8_2:51423150-51423169 | Msa1253750:CDS | 25.0% |
| ! | AGGATAGAGAAATCAAAATT+AGG | - | chr8_2:51423251-51423270 | Msa1253750:CDS | 25.0% |
| ! | AAAATTAGGAATAGATTAGG+AGG | - | chr8_2:51423265-51423284 | Msa1253750:CDS | 25.0% |
| ! | ATAGATTAGGAGGAAATAAA+TGG | - | chr8_2:51423275-51423294 | Msa1253750:CDS | 25.0% |
| TCATAATTTCAGTGGCAAAT+TGG | + | chr8_2:51421679-51421698 | None:intergenic | 30.0% | |
| !! | AAGGAACTTGTTAGAATCAA+AGG | - | chr8_2:51421809-51421828 | Msa1253750:CDS | 30.0% |
| !! | AACTTGTTAGAATCAAAGGA+AGG | - | chr8_2:51421813-51421832 | Msa1253750:CDS | 30.0% |
| ! | ACTTGTTAGAATCAAAGGAA+GGG | - | chr8_2:51421814-51421833 | Msa1253750:CDS | 30.0% |
| AGCACTAAACAATGACTTAA+AGG | - | chr8_2:51422102-51422121 | Msa1253750:CDS | 30.0% | |
| AAAAAAAAAACGAGACATGG+CGG | + | chr8_2:51422206-51422225 | None:intergenic | 30.0% | |
| ! | TCTTGTTTGTTTAGCAGTTT+AGG | - | chr8_2:51422243-51422262 | Msa1253750:intron | 30.0% |
| !!! | TATAGTCCTAGTTTTTTGAC+GGG | + | chr8_2:51422308-51422327 | None:intergenic | 30.0% |
| TTAGAAAAATGGACCTTCTT+AGG | + | chr8_2:51422362-51422381 | None:intergenic | 30.0% | |
| AAGAGGACATGTTAGAAAAA+TGG | + | chr8_2:51422373-51422392 | None:intergenic | 30.0% | |
| CATGTGACAACACAAATTAT+AGG | + | chr8_2:51422413-51422432 | None:intergenic | 30.0% | |
| GCTTGCAAAGATTTAGTTAT+CGG | - | chr8_2:51422509-51422528 | Msa1253750:intron | 30.0% | |
| TTCCTTAGAAATCAAAGAAG+TGG | + | chr8_2:51422933-51422952 | None:intergenic | 30.0% | |
| ! | TCTTTGATTTCTAAGGAAGT+TGG | - | chr8_2:51422935-51422954 | Msa1253750:CDS | 30.0% |
| !! | GGTAAATCAGTTATTTCTGA+AGG | - | chr8_2:51422956-51422975 | Msa1253750:CDS | 30.0% |
| ! | ATATATCTTTTGACACCAAG+TGG | - | chr8_2:51423037-51423056 | Msa1253750:CDS | 30.0% |
| ! | TATATCTTTTGACACCAAGT+GGG | - | chr8_2:51423038-51423057 | Msa1253750:CDS | 30.0% |
| ! | TATTGTTCACACCAATCTTT+TGG | - | chr8_2:51423074-51423093 | Msa1253750:CDS | 30.0% |
| CAATAAGCAAACCAAAAGAT+TGG | + | chr8_2:51423088-51423107 | None:intergenic | 30.0% | |
| ! | AACTAAGTTGAAAGTTGAAG+TGG | + | chr8_2:51423149-51423168 | None:intergenic | 30.0% |
| TATTGTGTACAAGAGACTTA+AGG | - | chr8_2:51423219-51423238 | Msa1253750:CDS | 30.0% | |
| TACAAGAGACTTAAGGTTAA+TGG | - | chr8_2:51423226-51423245 | Msa1253750:CDS | 30.0% | |
| TCATAATTTCAGTGGCAAAT+TGG | + | chr8_2:51421679-51421698 | None:intergenic | 30.0% | |
| !! | AAGGAACTTGTTAGAATCAA+AGG | - | chr8_2:51421809-51421828 | Msa1253750:CDS | 30.0% |
| !! | AACTTGTTAGAATCAAAGGA+AGG | - | chr8_2:51421813-51421832 | Msa1253750:CDS | 30.0% |
| ! | ACTTGTTAGAATCAAAGGAA+GGG | - | chr8_2:51421814-51421833 | Msa1253750:CDS | 30.0% |
| AGCACTAAACAATGACTTAA+AGG | - | chr8_2:51422102-51422121 | Msa1253750:CDS | 30.0% | |
| AAAAAAAAAACGAGACATGG+CGG | + | chr8_2:51422206-51422225 | None:intergenic | 30.0% | |
| ! | TCTTGTTTGTTTAGCAGTTT+AGG | - | chr8_2:51422243-51422262 | Msa1253750:intron | 30.0% |
| !!! | TATAGTCCTAGTTTTTTGAC+GGG | + | chr8_2:51422308-51422327 | None:intergenic | 30.0% |
| TTAGAAAAATGGACCTTCTT+AGG | + | chr8_2:51422362-51422381 | None:intergenic | 30.0% | |
| AAGAGGACATGTTAGAAAAA+TGG | + | chr8_2:51422373-51422392 | None:intergenic | 30.0% | |
| CATGTGACAACACAAATTAT+AGG | + | chr8_2:51422413-51422432 | None:intergenic | 30.0% | |
| GCTTGCAAAGATTTAGTTAT+CGG | - | chr8_2:51422509-51422528 | Msa1253750:intron | 30.0% | |
| TTCCTTAGAAATCAAAGAAG+TGG | + | chr8_2:51422933-51422952 | None:intergenic | 30.0% | |
| ! | TCTTTGATTTCTAAGGAAGT+TGG | - | chr8_2:51422935-51422954 | Msa1253750:CDS | 30.0% |
| !! | GGTAAATCAGTTATTTCTGA+AGG | - | chr8_2:51422956-51422975 | Msa1253750:CDS | 30.0% |
| ! | ATATATCTTTTGACACCAAG+TGG | - | chr8_2:51423037-51423056 | Msa1253750:CDS | 30.0% |
| ! | TATATCTTTTGACACCAAGT+GGG | - | chr8_2:51423038-51423057 | Msa1253750:CDS | 30.0% |
| ! | TATTGTTCACACCAATCTTT+TGG | - | chr8_2:51423074-51423093 | Msa1253750:CDS | 30.0% |
| CAATAAGCAAACCAAAAGAT+TGG | + | chr8_2:51423088-51423107 | None:intergenic | 30.0% | |
| ! | AACTAAGTTGAAAGTTGAAG+TGG | + | chr8_2:51423149-51423168 | None:intergenic | 30.0% |
| TATTGTGTACAAGAGACTTA+AGG | - | chr8_2:51423219-51423238 | Msa1253750:CDS | 30.0% | |
| TACAAGAGACTTAAGGTTAA+TGG | - | chr8_2:51423226-51423245 | Msa1253750:CDS | 30.0% | |
| CCTCAATTAGTGTATAGAGA+AGG | + | chr8_2:51421574-51421593 | None:intergenic | 35.0% | |
| CCTTCTCTATACACTAATTG+AGG | - | chr8_2:51421571-51421590 | Msa1253750:CDS | 35.0% | |
| TCTCTATACACTAATTGAGG+AGG | - | chr8_2:51421574-51421593 | Msa1253750:CDS | 35.0% | |
| TGTAGAGGAGTTTCAACAAA+TGG | + | chr8_2:51421632-51421651 | None:intergenic | 35.0% | |
| ATAGATGCAGCTATATGTAG+AGG | + | chr8_2:51421647-51421666 | None:intergenic | 35.0% | |
| TCTACATATAGCTGCATCTA+TGG | - | chr8_2:51421646-51421665 | Msa1253750:CDS | 35.0% | |
| CTACATATAGCTGCATCTAT+GGG | - | chr8_2:51421647-51421666 | Msa1253750:CDS | 35.0% | |
| GATTGAAACCTTCATTTGCT+TGG | - | chr8_2:51421699-51421718 | Msa1253750:CDS | 35.0% | |
| ! | TTTAGCTTCCAAGCAAATGA+AGG | + | chr8_2:51421710-51421729 | None:intergenic | 35.0% |
| CTTGGAAGCTAAATCAACAA+GGG | - | chr8_2:51421717-51421736 | Msa1253750:CDS | 35.0% | |
| !! | ACTCTTTTGGTTGTTTTGCA+TGG | + | chr8_2:51421762-51421781 | None:intergenic | 35.0% |
| GCAAAACAACCAAAAGAGTA+TGG | - | chr8_2:51421763-51421782 | Msa1253750:CDS | 35.0% | |
| TCGTTTCGTAGACATGAATA+AGG | - | chr8_2:51421790-51421809 | Msa1253750:CDS | 35.0% | |
| GTAACATCTTCGATCGAATT+TGG | + | chr8_2:51421914-51421933 | None:intergenic | 35.0% | |
| ATGGTATGATTGAACCAAGA+TGG | - | chr8_2:51422166-51422185 | Msa1253750:CDS | 35.0% | |
| ATTGAACCAAGATGGTGAAA+CGG | - | chr8_2:51422174-51422193 | Msa1253750:CDS | 35.0% | |
| ACTGCTAAACAAACAAGACA+TGG | + | chr8_2:51422241-51422260 | None:intergenic | 35.0% | |
| TGTTTGTTTAGCAGTTTAGG+TGG | - | chr8_2:51422246-51422265 | Msa1253750:intron | 35.0% | |
| GTTTGTTTAGCAGTTTAGGT+GGG | - | chr8_2:51422247-51422266 | Msa1253750:intron | 35.0% | |
| TTTGTTTAGCAGTTTAGGTG+GGG | - | chr8_2:51422248-51422267 | Msa1253750:intron | 35.0% | |
| GAGAATTTGAACTGACAGAT+AGG | + | chr8_2:51422278-51422297 | None:intergenic | 35.0% | |
| !!! | ATAGTCCTAGTTTTTTGACG+GGG | + | chr8_2:51422307-51422326 | None:intergenic | 35.0% |
| AAAACTAGGACTATATGCGT+TGG | - | chr8_2:51422313-51422332 | Msa1253750:intron | 35.0% | |
| ! | TCAATCCATTTTGCCTAAGA+AGG | - | chr8_2:51422346-51422365 | Msa1253750:intron | 35.0% |
| ! | CACCACTTCTTTGATTTCTA+AGG | - | chr8_2:51422928-51422947 | Msa1253750:CDS | 35.0% |
| GAGACTTAAGGTTAATGGAA+AGG | - | chr8_2:51423231-51423250 | Msa1253750:CDS | 35.0% | |
| CCTCAATTAGTGTATAGAGA+AGG | + | chr8_2:51421574-51421593 | None:intergenic | 35.0% | |
| CCTTCTCTATACACTAATTG+AGG | - | chr8_2:51421571-51421590 | Msa1253750:CDS | 35.0% | |
| TCTCTATACACTAATTGAGG+AGG | - | chr8_2:51421574-51421593 | Msa1253750:CDS | 35.0% | |
| TGTAGAGGAGTTTCAACAAA+TGG | + | chr8_2:51421632-51421651 | None:intergenic | 35.0% | |
| ATAGATGCAGCTATATGTAG+AGG | + | chr8_2:51421647-51421666 | None:intergenic | 35.0% | |
| TCTACATATAGCTGCATCTA+TGG | - | chr8_2:51421646-51421665 | Msa1253750:CDS | 35.0% | |
| CTACATATAGCTGCATCTAT+GGG | - | chr8_2:51421647-51421666 | Msa1253750:CDS | 35.0% | |
| GATTGAAACCTTCATTTGCT+TGG | - | chr8_2:51421699-51421718 | Msa1253750:CDS | 35.0% | |
| ! | TTTAGCTTCCAAGCAAATGA+AGG | + | chr8_2:51421710-51421729 | None:intergenic | 35.0% |
| CTTGGAAGCTAAATCAACAA+GGG | - | chr8_2:51421717-51421736 | Msa1253750:CDS | 35.0% | |
| !! | ACTCTTTTGGTTGTTTTGCA+TGG | + | chr8_2:51421762-51421781 | None:intergenic | 35.0% |
| GCAAAACAACCAAAAGAGTA+TGG | - | chr8_2:51421763-51421782 | Msa1253750:CDS | 35.0% | |
| TCGTTTCGTAGACATGAATA+AGG | - | chr8_2:51421790-51421809 | Msa1253750:CDS | 35.0% | |
| GTAACATCTTCGATCGAATT+TGG | + | chr8_2:51421914-51421933 | None:intergenic | 35.0% | |
| ATGGTATGATTGAACCAAGA+TGG | - | chr8_2:51422166-51422185 | Msa1253750:CDS | 35.0% | |
| ATTGAACCAAGATGGTGAAA+CGG | - | chr8_2:51422174-51422193 | Msa1253750:CDS | 35.0% | |
| ACTGCTAAACAAACAAGACA+TGG | + | chr8_2:51422241-51422260 | None:intergenic | 35.0% | |
| TGTTTGTTTAGCAGTTTAGG+TGG | - | chr8_2:51422246-51422265 | Msa1253750:intron | 35.0% | |
| GTTTGTTTAGCAGTTTAGGT+GGG | - | chr8_2:51422247-51422266 | Msa1253750:intron | 35.0% | |
| TTTGTTTAGCAGTTTAGGTG+GGG | - | chr8_2:51422248-51422267 | Msa1253750:intron | 35.0% | |
| GAGAATTTGAACTGACAGAT+AGG | + | chr8_2:51422278-51422297 | None:intergenic | 35.0% | |
| !!! | ATAGTCCTAGTTTTTTGACG+GGG | + | chr8_2:51422307-51422326 | None:intergenic | 35.0% |
| AAAACTAGGACTATATGCGT+TGG | - | chr8_2:51422313-51422332 | Msa1253750:intron | 35.0% | |
| ! | TCAATCCATTTTGCCTAAGA+AGG | - | chr8_2:51422346-51422365 | Msa1253750:intron | 35.0% |
| ! | CACCACTTCTTTGATTTCTA+AGG | - | chr8_2:51422928-51422947 | Msa1253750:CDS | 35.0% |
| GAGACTTAAGGTTAATGGAA+AGG | - | chr8_2:51423231-51423250 | Msa1253750:CDS | 35.0% | |
| ! | TGAGGAGGATCCATATGTTT+TGG | - | chr8_2:51421589-51421608 | Msa1253750:CDS | 40.0% |
| GCTTGGAAGCTAAATCAACA+AGG | - | chr8_2:51421716-51421735 | Msa1253750:CDS | 40.0% | |
| !! | TTTGGTTGTTTTGCATGGCA+AGG | + | chr8_2:51421757-51421776 | None:intergenic | 40.0% |
| !! | AACGAAGCACCATACTCTTT+TGG | + | chr8_2:51421775-51421794 | None:intergenic | 40.0% |
| GTTAGAATCAAAGGAAGGGA+AGG | - | chr8_2:51421818-51421837 | Msa1253750:CDS | 40.0% | |
| CTTTGACAAGCAAGATGAAG+AGG | + | chr8_2:51421851-51421870 | None:intergenic | 40.0% | |
| CTTCATCTTGCTTGTCAAAG+TGG | - | chr8_2:51421851-51421870 | Msa1253750:CDS | 40.0% | |
| GATCGAAGATGTTACTCTGA+GGG | - | chr8_2:51421919-51421938 | Msa1253750:CDS | 40.0% | |
| ATCGAAGATGTTACTCTGAG+GGG | - | chr8_2:51421920-51421939 | Msa1253750:CDS | 40.0% | |
| ! | GTTTGAAGCTCTTCATGTCT+TGG | - | chr8_2:51421979-51421998 | Msa1253750:CDS | 40.0% |
| TTGAACCAAGATGGTGAAAC+GGG | - | chr8_2:51422175-51422194 | Msa1253750:CDS | 40.0% | |
| !! | CAAAATGGATTGAGCCTGAT+GGG | + | chr8_2:51422339-51422358 | None:intergenic | 40.0% |
| ATGGACCTTCTTAGGCAAAA+TGG | + | chr8_2:51422354-51422373 | None:intergenic | 40.0% | |
| ! | TTTTGAGCTAGGTTTTGCTC+CGG | + | chr8_2:51422684-51422703 | None:intergenic | 40.0% |
| !! | GCATCTTTGACTTTTGAGCT+AGG | + | chr8_2:51422695-51422714 | None:intergenic | 40.0% |
| TTACCTTGATAAACTCCACC+CGG | + | chr8_2:51422881-51422900 | None:intergenic | 40.0% | |
| GGAGTTTATCAAGGTAATGC+AGG | - | chr8_2:51422884-51422903 | Msa1253750:CDS | 40.0% | |
| !! | TTGACACCAAGTGGGTTAAT+AGG | - | chr8_2:51423046-51423065 | Msa1253750:CDS | 40.0% |
| AAACCACCTATTAACCCACT+TGG | + | chr8_2:51423055-51423074 | None:intergenic | 40.0% | |
| TCTTGCACTCTAGTGTGTAT+TGG | - | chr8_2:51423188-51423207 | Msa1253750:CDS | 40.0% | |
| ! | TGAGGAGGATCCATATGTTT+TGG | - | chr8_2:51421589-51421608 | Msa1253750:CDS | 40.0% |
| GCTTGGAAGCTAAATCAACA+AGG | - | chr8_2:51421716-51421735 | Msa1253750:CDS | 40.0% | |
| !! | TTTGGTTGTTTTGCATGGCA+AGG | + | chr8_2:51421757-51421776 | None:intergenic | 40.0% |
| !! | AACGAAGCACCATACTCTTT+TGG | + | chr8_2:51421775-51421794 | None:intergenic | 40.0% |
| GTTAGAATCAAAGGAAGGGA+AGG | - | chr8_2:51421818-51421837 | Msa1253750:CDS | 40.0% | |
| CTTTGACAAGCAAGATGAAG+AGG | + | chr8_2:51421851-51421870 | None:intergenic | 40.0% | |
| CTTCATCTTGCTTGTCAAAG+TGG | - | chr8_2:51421851-51421870 | Msa1253750:CDS | 40.0% | |
| GATCGAAGATGTTACTCTGA+GGG | - | chr8_2:51421919-51421938 | Msa1253750:CDS | 40.0% | |
| ATCGAAGATGTTACTCTGAG+GGG | - | chr8_2:51421920-51421939 | Msa1253750:CDS | 40.0% | |
| ! | GTTTGAAGCTCTTCATGTCT+TGG | - | chr8_2:51421979-51421998 | Msa1253750:CDS | 40.0% |
| TTGAACCAAGATGGTGAAAC+GGG | - | chr8_2:51422175-51422194 | Msa1253750:CDS | 40.0% | |
| !! | CAAAATGGATTGAGCCTGAT+GGG | + | chr8_2:51422339-51422358 | None:intergenic | 40.0% |
| ATGGACCTTCTTAGGCAAAA+TGG | + | chr8_2:51422354-51422373 | None:intergenic | 40.0% | |
| ! | TTTTGAGCTAGGTTTTGCTC+CGG | + | chr8_2:51422684-51422703 | None:intergenic | 40.0% |
| !! | GCATCTTTGACTTTTGAGCT+AGG | + | chr8_2:51422695-51422714 | None:intergenic | 40.0% |
| TTACCTTGATAAACTCCACC+CGG | + | chr8_2:51422881-51422900 | None:intergenic | 40.0% | |
| GGAGTTTATCAAGGTAATGC+AGG | - | chr8_2:51422884-51422903 | Msa1253750:CDS | 40.0% | |
| !! | TTGACACCAAGTGGGTTAAT+AGG | - | chr8_2:51423046-51423065 | Msa1253750:CDS | 40.0% |
| AAACCACCTATTAACCCACT+TGG | + | chr8_2:51423055-51423074 | None:intergenic | 40.0% | |
| TCTTGCACTCTAGTGTGTAT+TGG | - | chr8_2:51423188-51423207 | Msa1253750:CDS | 40.0% | |
| GTGAAGGTTGCAACTCTAGA+AGG | - | chr8_2:51421539-51421558 | Msa1253750:CDS | 45.0% | |
| ! | TTTTGCATGGCAAGGTGGAT+TGG | + | chr8_2:51421749-51421768 | None:intergenic | 45.0% |
| CGATCGAAGATGTTACTCTG+AGG | - | chr8_2:51421918-51421937 | Msa1253750:CDS | 45.0% | |
| GAAGCTCTTCATGTCTTGGT+TGG | - | chr8_2:51421983-51422002 | Msa1253750:CDS | 45.0% | |
| CTCTTCATGTCTTGGTTGGT+TGG | - | chr8_2:51421987-51422006 | Msa1253750:CDS | 45.0% | |
| TTGAAGACAAATCGCCAGAG+AGG | - | chr8_2:51422010-51422029 | Msa1253750:CDS | 45.0% | |
| !! | AAAAACGAGACATGGCGGAT+AGG | + | chr8_2:51422201-51422220 | None:intergenic | 45.0% |
| TTTAGCAGTTTAGGTGGGGA+GGG | - | chr8_2:51422252-51422271 | Msa1253750:intron | 45.0% | |
| !! | GCAAAATGGATTGAGCCTGA+TGG | + | chr8_2:51422340-51422359 | None:intergenic | 45.0% |
| TACCTTGATAAACTCCACCC+GGG | + | chr8_2:51422880-51422899 | None:intergenic | 45.0% | |
| !! | ACACCAAGTGGGTTAATAGG+TGG | - | chr8_2:51423049-51423068 | Msa1253750:CDS | 45.0% |
| AAAGTTGAAGTGGCAGAGGT+AGG | + | chr8_2:51423139-51423158 | None:intergenic | 45.0% | |
| GTTGAAAGTTGAAGTGGCAG+AGG | + | chr8_2:51423143-51423162 | None:intergenic | 45.0% | |
| GTGAAGGTTGCAACTCTAGA+AGG | - | chr8_2:51421539-51421558 | Msa1253750:CDS | 45.0% | |
| ! | TTTTGCATGGCAAGGTGGAT+TGG | + | chr8_2:51421749-51421768 | None:intergenic | 45.0% |
| CGATCGAAGATGTTACTCTG+AGG | - | chr8_2:51421918-51421937 | Msa1253750:CDS | 45.0% | |
| GAAGCTCTTCATGTCTTGGT+TGG | - | chr8_2:51421983-51422002 | Msa1253750:CDS | 45.0% | |
| CTCTTCATGTCTTGGTTGGT+TGG | - | chr8_2:51421987-51422006 | Msa1253750:CDS | 45.0% | |
| TTGAAGACAAATCGCCAGAG+AGG | - | chr8_2:51422010-51422029 | Msa1253750:CDS | 45.0% | |
| !! | AAAAACGAGACATGGCGGAT+AGG | + | chr8_2:51422201-51422220 | None:intergenic | 45.0% |
| TTTAGCAGTTTAGGTGGGGA+GGG | - | chr8_2:51422252-51422271 | Msa1253750:intron | 45.0% | |
| !! | GCAAAATGGATTGAGCCTGA+TGG | + | chr8_2:51422340-51422359 | None:intergenic | 45.0% |
| TACCTTGATAAACTCCACCC+GGG | + | chr8_2:51422880-51422899 | None:intergenic | 45.0% | |
| !! | ACACCAAGTGGGTTAATAGG+TGG | - | chr8_2:51423049-51423068 | Msa1253750:CDS | 45.0% |
| AAAGTTGAAGTGGCAGAGGT+AGG | + | chr8_2:51423139-51423158 | None:intergenic | 45.0% | |
| GTTGAAAGTTGAAGTGGCAG+AGG | + | chr8_2:51423143-51423162 | None:intergenic | 45.0% | |
| !! | GGTTGTTTTGCATGGCAAGG+TGG | + | chr8_2:51421754-51421773 | None:intergenic | 50.0% |
| !! | AAATCGCCAGAGAGGTGCTA+GGG | - | chr8_2:51422018-51422037 | Msa1253750:CDS | 50.0% |
| ATAGGCCCGTTTCACCATCT+TGG | + | chr8_2:51422183-51422202 | None:intergenic | 50.0% | |
| GTTTAGCAGTTTAGGTGGGG+AGG | - | chr8_2:51422251-51422270 | Msa1253750:intron | 50.0% | |
| ACTCGCCCCGTCAAAAAACT+AGG | - | chr8_2:51422299-51422318 | Msa1253750:intron | 50.0% | |
| ! | ACTATATGCGTTGGCCCATC+AGG | - | chr8_2:51422322-51422341 | Msa1253750:intron | 50.0% |
| !! | GCAGCAAGTGCCGAAATCAA+AGG | - | chr8_2:51422644-51422663 | Msa1253750:intron | 50.0% |
| ACCTTGATAAACTCCACCCG+GGG | + | chr8_2:51422879-51422898 | None:intergenic | 50.0% | |
| !! | GGTTGTTTTGCATGGCAAGG+TGG | + | chr8_2:51421754-51421773 | None:intergenic | 50.0% |
| !! | AAATCGCCAGAGAGGTGCTA+GGG | - | chr8_2:51422018-51422037 | Msa1253750:CDS | 50.0% |
| ATAGGCCCGTTTCACCATCT+TGG | + | chr8_2:51422183-51422202 | None:intergenic | 50.0% | |
| GTTTAGCAGTTTAGGTGGGG+AGG | - | chr8_2:51422251-51422270 | Msa1253750:intron | 50.0% | |
| ACTCGCCCCGTCAAAAAACT+AGG | - | chr8_2:51422299-51422318 | Msa1253750:intron | 50.0% | |
| ! | ACTATATGCGTTGGCCCATC+AGG | - | chr8_2:51422322-51422341 | Msa1253750:intron | 50.0% |
| !! | GCAGCAAGTGCCGAAATCAA+AGG | - | chr8_2:51422644-51422663 | Msa1253750:intron | 50.0% |
| ACCTTGATAAACTCCACCCG+GGG | + | chr8_2:51422879-51422898 | None:intergenic | 50.0% | |
| !! | CAAATCGCCAGAGAGGTGCT+AGG | - | chr8_2:51422017-51422036 | Msa1253750:CDS | 55.0% |
| TTCACAGGCGCTTCGACTGT+TGG | - | chr8_2:51422562-51422581 | Msa1253750:intron | 55.0% | |
| ! | TCAATCAGCACTGAGTCCCC+CGG | - | chr8_2:51422859-51422878 | Msa1253750:CDS | 55.0% |
| CCTTGATAAACTCCACCCGG+GGG | + | chr8_2:51422878-51422897 | None:intergenic | 55.0% | |
| !! | CAAATCGCCAGAGAGGTGCT+AGG | - | chr8_2:51422017-51422036 | Msa1253750:CDS | 55.0% |
| TTCACAGGCGCTTCGACTGT+TGG | - | chr8_2:51422562-51422581 | Msa1253750:intron | 55.0% | |
| ! | TCAATCAGCACTGAGTCCCC+CGG | - | chr8_2:51422859-51422878 | Msa1253750:CDS | 55.0% |
| CCTTGATAAACTCCACCCGG+GGG | + | chr8_2:51422878-51422897 | None:intergenic | 55.0% | |
| CCAACTCCCTAGCACCTCTC+TGG | + | chr8_2:51422027-51422046 | None:intergenic | 60.0% | |
| !! | CCAGAGAGGTGCTAGGGAGT+TGG | - | chr8_2:51422024-51422043 | Msa1253750:CDS | 60.0% |
| ! | CAATCAGCACTGAGTCCCCC+GGG | - | chr8_2:51422860-51422879 | Msa1253750:CDS | 60.0% |
| CCCCCGGGTGGAGTTTATCA+AGG | - | chr8_2:51422875-51422894 | Msa1253750:CDS | 60.0% | |
| CCAACTCCCTAGCACCTCTC+TGG | + | chr8_2:51422027-51422046 | None:intergenic | 60.0% | |
| !! | CCAGAGAGGTGCTAGGGAGT+TGG | - | chr8_2:51422024-51422043 | Msa1253750:CDS | 60.0% |
| ! | CAATCAGCACTGAGTCCCCC+GGG | - | chr8_2:51422860-51422879 | Msa1253750:CDS | 60.0% |
| CCCCCGGGTGGAGTTTATCA+AGG | - | chr8_2:51422875-51422894 | Msa1253750:CDS | 60.0% | |
| ! | TCAGCACTGAGTCCCCCGGG+TGG | - | chr8_2:51422863-51422882 | Msa1253750:CDS | 70.0% |
| ! | TCAGCACTGAGTCCCCCGGG+TGG | - | chr8_2:51422863-51422882 | Msa1253750:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 51421509 | 51423300 | 51421509 | ID=Msa1253750;Name=Msa1253750 |
| chr8_2 | mRNA | 51421509 | 51423300 | 51421509 | ID=Msa1253750-mRNA-1;Parent=Msa1253750;Name=Msa1253750-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|2|0|448 |
| chr8_2 | exon | 51422686 | 51423300 | 51422686 | ID=Msa1253750-mRNA-1:exon:15768;Parent=Msa1253750-mRNA-1 |
| chr8_2 | exon | 51421509 | 51422240 | 51421509 | ID=Msa1253750-mRNA-1:exon:15767;Parent=Msa1253750-mRNA-1 |
| chr8_2 | CDS | 51422686 | 51423300 | 51422686 | ID=Msa1253750-mRNA-1:cds;Parent=Msa1253750-mRNA-1 |
| chr8_2 | CDS | 51421509 | 51422240 | 51421509 | ID=Msa1253750-mRNA-1:cds;Parent=Msa1253750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
