Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1431160 | XP_013465848.1 | 88.718 | 390 | 32 | 2 | 1 | 379 | 1 | 389 | 0.0 | 693 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1431160 | sp|Q3S4A7|AHK5_ARATH | 61.364 | 396 | 129 | 5 | 2 | 379 | 42 | 431 | 1.41e-151 | 454 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1431160 | A0A072VD15 | 88.718 | 390 | 32 | 2 | 1 | 379 | 1 | 389 | 0.0 | 693 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005610 | Msa1431160 | 0.877357 | 6.708115e-69 | -8.615850e-47 |
| Msa0010150 | Msa1431160 | 0.801608 | 8.307890e-49 | -8.615850e-47 |
| Msa0022900 | Msa1431160 | 0.813950 | 1.974931e-51 | -8.615850e-47 |
| Msa0027860 | Msa1431160 | 0.814055 | 1.871932e-51 | -8.615850e-47 |
| Msa0054020 | Msa1431160 | 0.858068 | 1.061830e-62 | -8.615850e-47 |
| Msa0096590 | Msa1431160 | 0.934803 | 2.290355e-96 | -8.615850e-47 |
| Msa0118660 | Msa1431160 | 0.830159 | 3.435055e-55 | -8.615850e-47 |
| Msa1355340 | Msa1431160 | 0.809049 | 2.292951e-50 | -8.615850e-47 |
| Msa1357840 | Msa1431160 | 0.806876 | 6.647461e-50 | -8.615850e-47 |
| Msa1365450 | Msa1431160 | 0.835954 | 1.242084e-56 | -8.615850e-47 |
| Msa1383560 | Msa1431160 | 0.811735 | 6.035026e-51 | -8.615850e-47 |
| Msa1411550 | Msa1431160 | 0.821927 | 3.111821e-53 | -8.615850e-47 |
| Msa1431160 | Msa1445890 | 0.819963 | 8.811416e-53 | -8.615850e-47 |
| Msa1431160 | Msa1445900 | 0.829277 | 5.632126e-55 | -8.615850e-47 |
| Msa1431160 | Msa1459610 | 0.828415 | 9.104377e-55 | -8.615850e-47 |
| Msa0616300 | Msa1431160 | 0.807627 | 4.607794e-50 | -8.615850e-47 |
| Msa0628140 | Msa1431160 | 0.813515 | 2.461905e-51 | -8.615850e-47 |
| Msa0631700 | Msa1431160 | 0.817083 | 3.963169e-52 | -8.615850e-47 |
| Msa0633940 | Msa1431160 | 0.800348 | 1.503183e-48 | -8.615850e-47 |
| Msa0634290 | Msa1431160 | 0.805395 | 1.362948e-49 | -8.615850e-47 |
| Msa0670360 | Msa1431160 | 0.837507 | 4.989729e-57 | -8.615850e-47 |
| Msa0671640 | Msa1431160 | 0.801176 | 1.018808e-48 | -8.615850e-47 |
| Msa0685080 | Msa1431160 | 0.833635 | 4.762745e-56 | -8.615850e-47 |
| Msa0715220 | Msa1431160 | 0.834826 | 2.394663e-56 | -8.615850e-47 |
| Msa0727480 | Msa1431160 | 0.816174 | 6.335501e-52 | -8.615850e-47 |
| Msa0739750 | Msa1431160 | 0.801467 | 8.883526e-49 | -8.615850e-47 |
| Msa0768670 | Msa1431160 | 0.825828 | 3.789180e-54 | -8.615850e-47 |
| Msa0768720 | Msa1431160 | 0.816652 | 4.951094e-52 | -8.615850e-47 |
| Msa0777070 | Msa1431160 | 0.814242 | 1.702360e-51 | -8.615850e-47 |
| Msa0777250 | Msa1431160 | 0.807202 | 5.670576e-50 | -8.615850e-47 |
| Msa0798840 | Msa1431160 | 0.805399 | 1.360375e-49 | -8.615850e-47 |
| Msa0814230 | Msa1431160 | 0.835198 | 1.929178e-56 | -8.615850e-47 |
| Msa0123530 | Msa1431160 | 0.809739 | 1.630457e-50 | -8.615850e-47 |
| Msa0148700 | Msa1431160 | 0.819795 | 9.626098e-53 | -8.615850e-47 |
| Msa0150920 | Msa1431160 | 0.817802 | 2.729097e-52 | -8.615850e-47 |
| Msa0160580 | Msa1431160 | 0.821594 | 3.716903e-53 | -8.615850e-47 |
| Msa0190670 | Msa1431160 | 0.801205 | 1.005121e-48 | -8.615850e-47 |
| Msa0195580 | Msa1431160 | 0.805823 | 1.108502e-49 | -8.615850e-47 |
| Msa0209060 | Msa1431160 | 0.835460 | 1.657040e-56 | -8.615850e-47 |
| Msa0209520 | Msa1431160 | 0.806194 | 9.261612e-50 | -8.615850e-47 |
| Msa1231720 | Msa1431160 | 0.809676 | 1.682412e-50 | -8.615850e-47 |
| Msa1233640 | Msa1431160 | 0.804151 | 2.478991e-49 | -8.615850e-47 |
| Msa1236680 | Msa1431160 | 0.834777 | 2.462979e-56 | -8.615850e-47 |
| Msa1269050 | Msa1431160 | 0.804649 | 1.951748e-49 | -8.615850e-47 |
| Msa1271960 | Msa1431160 | 0.821669 | 3.570910e-53 | -8.615850e-47 |
| Msa1275860 | Msa1431160 | 0.800151 | 1.648871e-48 | -8.615850e-47 |
| Msa1294020 | Msa1431160 | 0.817752 | 2.801011e-52 | -8.615850e-47 |
| Msa1297390 | Msa1431160 | 0.816152 | 6.406107e-52 | -8.615850e-47 |
| Msa1297850 | Msa1431160 | 0.809711 | 1.653480e-50 | -8.615850e-47 |
| Msa1309390 | Msa1431160 | 0.820410 | 6.962257e-53 | -8.615850e-47 |
| Msa1319010 | Msa1431160 | 0.808279 | 3.349139e-50 | -8.615850e-47 |
| Msa0366510 | Msa1431160 | 0.825228 | 5.255244e-54 | -8.615850e-47 |
| Msa0369990 | Msa1431160 | 0.804584 | 2.014097e-49 | -8.615850e-47 |
| Msa0374030 | Msa1431160 | 0.814097 | 1.832603e-51 | -8.615850e-47 |
| Msa0374040 | Msa1431160 | 0.824611 | 7.348912e-54 | -8.615850e-47 |
| Msa0414480 | Msa1431160 | 0.841248 | 5.332560e-58 | -8.615850e-47 |
| Msa0439000 | Msa1431160 | 0.814913 | 1.209259e-51 | -8.615850e-47 |
| Msa0439370 | Msa1431160 | 0.805450 | 1.327134e-49 | -8.615850e-47 |
| Msa0448230 | Msa1431160 | 0.802403 | 5.702923e-49 | -8.615850e-47 |
| Msa0464310 | Msa1431160 | 0.816651 | 4.954799e-52 | -8.615850e-47 |
| Msa0987640 | Msa1431160 | 0.869937 | 2.129624e-66 | -8.615850e-47 |
| Msa0993450 | Msa1431160 | 0.803183 | 3.935990e-49 | -8.615850e-47 |
| Msa0993710 | Msa1431160 | 0.804929 | 1.705704e-49 | -8.615850e-47 |
| Msa0995110 | Msa1431160 | 0.800170 | 1.634121e-48 | -8.615850e-47 |
| Msa0996980 | Msa1431160 | 0.819728 | 9.974253e-53 | -8.615850e-47 |
| Msa1006030 | Msa1431160 | 0.810291 | 1.240271e-50 | -8.615850e-47 |
| Msa1006170 | Msa1431160 | 0.806673 | 7.337462e-50 | -8.615850e-47 |
| Msa1021620 | Msa1431160 | 0.810523 | 1.104800e-50 | -8.615850e-47 |
| Msa1022490 | Msa1431160 | 0.819571 | 1.082918e-52 | -8.615850e-47 |
| Msa1022510 | Msa1431160 | 0.831086 | 2.037359e-55 | -8.615850e-47 |
| Msa1024480 | Msa1431160 | 0.816222 | 6.180891e-52 | -8.615850e-47 |
| Msa1030320 | Msa1431160 | 0.823719 | 1.190381e-53 | -8.615850e-47 |
| Msa1041910 | Msa1431160 | 0.803789 | 2.947896e-49 | -8.615850e-47 |
| Msa1048350 | Msa1431160 | 0.824747 | 6.824517e-54 | -8.615850e-47 |
| Msa1048390 | Msa1431160 | 0.804346 | 2.258126e-49 | -8.615850e-47 |
| Msa1059660 | Msa1431160 | 0.836964 | 6.872657e-57 | -8.615850e-47 |
| Msa1061670 | Msa1431160 | 0.856597 | 2.888690e-62 | -8.615850e-47 |
| Msa1064940 | Msa1431160 | 0.823717 | 1.191587e-53 | -8.615850e-47 |
| Msa1087370 | Msa1431160 | 0.803962 | 2.713284e-49 | -8.615850e-47 |
| Msa1087380 | Msa1431160 | 0.819840 | 9.404018e-53 | -8.615850e-47 |
| Msa1100330 | Msa1431160 | 0.808352 | 3.231032e-50 | -8.615850e-47 |
| Msa1106680 | Msa1431160 | 0.835508 | 1.610948e-56 | -8.615850e-47 |
| Msa1106960 | Msa1431160 | 0.854325 | 1.326943e-61 | -8.615850e-47 |
| Msa0272210 | Msa1431160 | 0.834663 | 2.631827e-56 | -8.615850e-47 |
| Msa0274250 | Msa1431160 | 0.808547 | 2.934833e-50 | -8.615850e-47 |
| Msa0274260 | Msa1431160 | 0.804641 | 1.959065e-49 | -8.615850e-47 |
| Msa0278950 | Msa1431160 | 0.801964 | 7.022549e-49 | -8.615850e-47 |
| Msa0287630 | Msa1431160 | 0.805634 | 1.214395e-49 | -8.615850e-47 |
| Msa0288540 | Msa1431160 | 0.834502 | 2.889021e-56 | -8.615850e-47 |
| Msa0326770 | Msa1431160 | 0.855684 | 5.347525e-62 | -8.615850e-47 |
| Msa1108560 | Msa1431160 | 0.807941 | 3.951706e-50 | -8.615850e-47 |
| Msa1143250 | Msa1431160 | 0.811788 | 5.874868e-51 | -8.615850e-47 |
| Msa1147030 | Msa1431160 | 0.823325 | 1.471944e-53 | -8.615850e-47 |
| Msa1148210 | Msa1431160 | 0.841105 | 5.815190e-58 | -8.615850e-47 |
| Msa1152180 | Msa1431160 | 0.811973 | 5.354885e-51 | -8.615850e-47 |
| Msa1167960 | Msa1431160 | 0.817309 | 3.524848e-52 | -8.615850e-47 |
| Msa1170340 | Msa1431160 | 0.811415 | 7.081992e-51 | -8.615850e-47 |
| Msa1181090 | Msa1431160 | 0.807727 | 4.388930e-50 | -8.615850e-47 |
| Msa1205910 | Msa1431160 | 0.825190 | 5.365191e-54 | -8.615850e-47 |
| Msa0482790 | Msa1431160 | 0.801635 | 8.205903e-49 | -8.615850e-47 |
| Msa0515130 | Msa1431160 | 0.821263 | 4.431334e-53 | -8.615850e-47 |
| Msa0515150 | Msa1431160 | 0.811542 | 6.646730e-51 | -8.615850e-47 |
| Msa0535570 | Msa1431160 | 0.826018 | 3.414984e-54 | -8.615850e-47 |
| Msa0538440 | Msa1431160 | 0.807878 | 4.076126e-50 | -8.615850e-47 |
| Msa0538450 | Msa1431160 | 0.806537 | 7.840289e-50 | -8.615850e-47 |
| Msa0538520 | Msa1431160 | 0.804508 | 2.088419e-49 | -8.615850e-47 |
| Msa0543740 | Msa1431160 | 0.820345 | 7.203239e-53 | -8.615850e-47 |
| Msa0554660 | Msa1431160 | 0.835382 | 1.733574e-56 | -8.615850e-47 |
| Msa0591490 | Msa1431160 | 0.854864 | 9.265614e-62 | -8.615850e-47 |
| Msa0593870 | Msa1431160 | 0.804866 | 1.758880e-49 | -8.615850e-47 |
| Msa0602050 | Msa1431160 | 0.824918 | 6.222541e-54 | -8.615850e-47 |
| Msa0856740 | Msa1431160 | 0.809394 | 1.933535e-50 | -8.615850e-47 |
| Msa0861730 | Msa1431160 | 0.804645 | 1.956101e-49 | -8.615850e-47 |
| Msa0893840 | Msa1431160 | 0.803700 | 3.075398e-49 | -8.615850e-47 |
| Msa0896920 | Msa1431160 | 0.834962 | 2.213140e-56 | -8.615850e-47 |
| Msa0896950 | Msa1431160 | 0.830143 | 3.466217e-55 | -8.615850e-47 |
| Msa0910830 | Msa1431160 | 0.815730 | 7.960580e-52 | -8.615850e-47 |
| Msa0913550 | Msa1431160 | 0.858754 | 6.629310e-63 | -8.615850e-47 |
| Msa0946010 | Msa1431160 | 0.818313 | 2.091753e-52 | -8.615850e-47 |
| Msa0946310 | Msa1431160 | 0.803364 | 3.611171e-49 | -8.615850e-47 |
| Msa0951150 | Msa1431160 | 0.855734 | 5.171912e-62 | -8.615850e-47 |
| Msa0959240 | Msa1431160 | 0.806296 | 8.814225e-50 | -8.615850e-47 |
| Msa0967190 | Msa1431160 | 0.813418 | 2.586087e-51 | -8.615850e-47 |
| Msa0967200 | Msa1431160 | 0.805689 | 1.182718e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1431160 | MtrunA17_Chr1g0150531 | 88.718 | 390 | 32 | 2 | 1 | 379 | 1 | 389 | 0.0 | 693 |
| Msa1431160 | MtrunA17_Chr1g0150511 | 81.203 | 399 | 54 | 3 | 2 | 379 | 43 | 441 | 0.0 | 635 |
| Msa1431160 | MtrunA17_Chr3g0136601 | 74.874 | 398 | 79 | 4 | 2 | 379 | 39 | 435 | 0.0 | 586 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1431160 | AT5G10720.1 | 61.364 | 396 | 129 | 5 | 2 | 379 | 42 | 431 | 1.43e-152 | 454 |
| Msa1431160 | AT5G10680.2 | 46.212 | 132 | 53 | 4 | 1 | 122 | 37 | 160 | 1.44e-23 | 98.6 |
| Msa1431160 | AT5G10680.1 | 46.212 | 132 | 53 | 4 | 1 | 122 | 37 | 160 | 1.44e-23 | 98.6 |
Find 54 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATGCACCTGTTGTTAT+AGG | 0.182020 | tig0026810:-8228 | Msa1431160:CDS |
| CTTTGAAAATCAGCTATAAT+TGG | 0.203037 | tig0026810:+8738 | None:intergenic |
| AATAAAACTATTTACATTAC+AGG | 0.248651 | tig0026810:-7142 | Msa1431160:intron |
| CATGATATCTTCAGGAGATT+TGG | 0.274046 | tig0026810:-6895 | Msa1431160:CDS |
| AGAAAGGAATACCTGCAAAA+AGG | 0.324513 | tig0026810:-7705 | Msa1431160:CDS |
| AAAACATCCGGATTCAATAT+TGG | 0.341750 | tig0026810:-8508 | Msa1431160:CDS |
| AGAAGAAGTAACAATCTTAG+AGG | 0.346203 | tig0026810:-8763 | Msa1431160:CDS |
| GAAACATCGGTCACGAGATA+TGG | 0.358103 | tig0026810:-8400 | Msa1431160:CDS |
| AGTATGATGATGTTGTTTAC+TGG | 0.359184 | tig0026810:-8422 | Msa1431160:CDS |
| AAGAGAGAAGTAATGGAGAA+AGG | 0.411442 | tig0026810:-7721 | Msa1431160:CDS |
| CTTCCTCCCTTTGTTTGCTA+AGG | 0.415873 | tig0026810:+8598 | None:intergenic |
| TTTATTAAGTTCCGTTTCCT+TGG | 0.423794 | tig0026810:+7159 | None:intergenic |
| TATTGGATGGTGTTGCAATC+AGG | 0.426610 | tig0026810:-8491 | Msa1431160:CDS |
| AACGATTGGAGGGAAGTATT+CGG | 0.430328 | tig0026810:-8374 | Msa1431160:CDS |
| ATAAATTTCCAGGACCTCAT+AGG | 0.439968 | tig0026810:-7799 | Msa1431160:intron |
| GAGATACTTAAAGACAATAA+TGG | 0.444436 | tig0026810:-8558 | Msa1431160:CDS |
| TTGGATGCCATGATATCTTC+AGG | 0.452888 | tig0026810:-6903 | Msa1431160:CDS |
| TAAAGACAATAATGGATTTG+AGG | 0.457522 | tig0026810:-8550 | Msa1431160:CDS |
| TAGAGAACAAAGGCAGCTCT+TGG | 0.468770 | tig0026810:-6922 | Msa1431160:CDS |
| GATCCTTCCAAGGCTGAGTC+GGG | 0.469731 | tig0026810:-6846 | Msa1431160:CDS |
| CAAATCTCCTGAAGATATCA+TGG | 0.470277 | tig0026810:+6896 | None:intergenic |
| AGCAAGGCAGGAGAAACAAT+TGG | 0.472538 | tig0026810:-7616 | Msa1431160:CDS |
| ACCTGTTGTTATAGGCCATC+AGG | 0.477859 | tig0026810:-8220 | Msa1431160:intron |
| TTTCTAACCCGACTCAGCCT+TGG | 0.478360 | tig0026810:+6839 | None:intergenic |
| AGCTAATCTCACGAAACATT+GGG | 0.482663 | tig0026810:-8670 | Msa1431160:CDS |
| ACCTGATGGCCTATAACAAC+AGG | 0.486112 | tig0026810:+8219 | None:intergenic |
| GAACCTGTGTTTAGCAAGGC+AGG | 0.487467 | tig0026810:-7628 | Msa1431160:CDS |
| TGATCCTTCCAAGGCTGAGT+CGG | 0.495766 | tig0026810:-6847 | Msa1431160:CDS |
| ACACCATCCAATATTGAATC+CGG | 0.501464 | tig0026810:+8501 | None:intergenic |
| AAACAAAAGAATTGAAATTG+AGG | 0.507015 | tig0026810:-8448 | Msa1431160:CDS |
| TGTCGAGCTCTTCTCGAAGA+AGG | 0.522863 | tig0026810:+8622 | None:intergenic |
| TAGCTAATCTCACGAAACAT+TGG | 0.523948 | tig0026810:-8671 | Msa1431160:CDS |
| AATGAGAGCAAAACAAGTGC+TGG | 0.527084 | tig0026810:-7024 | Msa1431160:CDS |
| ACTTTCTGATGTTGTTAGCA+TGG | 0.533367 | tig0026810:-6973 | Msa1431160:CDS |
| CGACAACCTTAGCAAACAAA+GGG | 0.535427 | tig0026810:-8604 | Msa1431160:CDS |
| TCTCCTGCCTTGCTAAACAC+AGG | 0.549002 | tig0026810:+7625 | None:intergenic |
| CATCCGGATTCAATATTGGA+TGG | 0.554723 | tig0026810:-8504 | Msa1431160:CDS |
| GAAACATTGGGAGTATAAGC+AGG | 0.554790 | tig0026810:-8658 | Msa1431160:CDS |
| TGATATACTTGATCCTTCCA+AGG | 0.562404 | tig0026810:-6856 | Msa1431160:CDS |
| ATCTGTGACAGTTCTTCCAC+AGG | 0.563140 | tig0026810:+8288 | None:intergenic |
| AGTTCAGAAAGCCAAGGAAA+CGG | 0.563751 | tig0026810:-7170 | Msa1431160:CDS |
| ATGCTAACAACATCAGAAAG+TGG | 0.579722 | tig0026810:+6975 | None:intergenic |
| TAACCCGACTCAGCCTTGGA+AGG | 0.583784 | tig0026810:+6843 | None:intergenic |
| TCGACAACCTTAGCAAACAA+AGG | 0.586507 | tig0026810:-8605 | Msa1431160:CDS |
| TGCAGAACCTGTGTTTAGCA+AGG | 0.605158 | tig0026810:-7632 | Msa1431160:CDS |
| TTTCACGGGATCAGGTGCGA+AGG | 0.618292 | tig0026810:-7758 | Msa1431160:CDS |
| ATGTTGTTTACTGGAAACAT+CGG | 0.642416 | tig0026810:-8413 | Msa1431160:CDS |
| CAACCTTAGCAAACAAAGGG+AGG | 0.643459 | tig0026810:-8601 | Msa1431160:CDS |
| GGATTTGAGGAAGAAAGCTA+CGG | 0.643602 | tig0026810:-8537 | Msa1431160:CDS |
| TGAAAGACAATCATCACCTG+TGG | 0.646063 | tig0026810:-8304 | Msa1431160:CDS |
| AATTGCAGTTCAGAAAGCCA+AGG | 0.648370 | tig0026810:-7176 | Msa1431160:CDS |
| GTAAACAACATCATCATACT+CGG | 0.655371 | tig0026810:+8425 | None:intergenic |
| TTTGAGGAAGAAAGCTACGG+TGG | 0.675740 | tig0026810:-8534 | Msa1431160:CDS |
| CAAAACTTGATAGAGAACAA+AGG | 0.676780 | tig0026810:-6932 | Msa1431160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTAAATTTGTTTATAAGT+GGG | + | tig0026810:8169-8188 | None:intergenic | 15.0% |
| !! | AATAAAACTATTTACATTAC+AGG | - | tig0026810:8480-8499 | Msa1431160:CDS | 15.0% |
| !! | GAAATTCATAAATCAAAATT+TGG | + | tig0026810:8520-8539 | None:intergenic | 15.0% |
| !!! | TTGTAAATTTGTTTATAAGT+GGG | + | tig0026810:8169-8188 | None:intergenic | 15.0% |
| !! | AATAAAACTATTTACATTAC+AGG | - | tig0026810:8480-8499 | Msa1431160:CDS | 15.0% |
| !! | GAAATTCATAAATCAAAATT+TGG | + | tig0026810:8520-8539 | None:intergenic | 15.0% |
| !! | AAACAAAAGAATTGAAATTG+AGG | - | tig0026810:7174-7193 | Msa1431160:CDS | 20.0% |
| !!! | TGTAAATTTGTTTATAAGTG+GGG | + | tig0026810:8168-8187 | None:intergenic | 20.0% |
| !!! | CTTGTAAATTTGTTTATAAG+TGG | + | tig0026810:8170-8189 | None:intergenic | 20.0% |
| !! | AAACAAAAGAATTGAAATTG+AGG | - | tig0026810:7174-7193 | Msa1431160:CDS | 20.0% |
| !!! | TGTAAATTTGTTTATAAGTG+GGG | + | tig0026810:8168-8187 | None:intergenic | 20.0% |
| !!! | CTTGTAAATTTGTTTATAAG+TGG | + | tig0026810:8170-8189 | None:intergenic | 20.0% |
| !! | CTTTGAAAATCAGCTATAAT+TGG | + | tig0026810:6887-6906 | None:intergenic | 25.0% |
| ! | GAGATACTTAAAGACAATAA+TGG | - | tig0026810:7064-7083 | Msa1431160:intron | 25.0% |
| !!! | TAAAGACAATAATGGATTTG+AGG | - | tig0026810:7072-7091 | Msa1431160:intron | 25.0% |
| !!! | AGATTTTAAGAGAGAAGTAA+TGG | - | tig0026810:7894-7913 | Msa1431160:intron | 25.0% |
| !! | ATTGTCTTAAAATTTGGGTT+AGG | - | tig0026810:8099-8118 | Msa1431160:intron | 25.0% |
| !! | GTAAATTTGTTTATAAGTGG+GGG | + | tig0026810:8167-8186 | None:intergenic | 25.0% |
| ! | ATAGGATATGTGTTTATAAG+TGG | - | tig0026810:8303-8322 | Msa1431160:CDS | 25.0% |
| ! | TAGGATATGTGTTTATAAGT+GGG | - | tig0026810:8304-8323 | Msa1431160:CDS | 25.0% |
| !!! | GATTGAAAGGTATTAGAATT+TGG | + | tig0026810:8341-8360 | None:intergenic | 25.0% |
| !! | CTTTGAAAATCAGCTATAAT+TGG | + | tig0026810:6887-6906 | None:intergenic | 25.0% |
| ! | GAGATACTTAAAGACAATAA+TGG | - | tig0026810:7064-7083 | Msa1431160:intron | 25.0% |
| !!! | TAAAGACAATAATGGATTTG+AGG | - | tig0026810:7072-7091 | Msa1431160:intron | 25.0% |
| !!! | AGATTTTAAGAGAGAAGTAA+TGG | - | tig0026810:7894-7913 | Msa1431160:intron | 25.0% |
| !! | ATTGTCTTAAAATTTGGGTT+AGG | - | tig0026810:8099-8118 | Msa1431160:intron | 25.0% |
| !! | GTAAATTTGTTTATAAGTGG+GGG | + | tig0026810:8167-8186 | None:intergenic | 25.0% |
| ! | ATAGGATATGTGTTTATAAG+TGG | - | tig0026810:8303-8322 | Msa1431160:CDS | 25.0% |
| ! | TAGGATATGTGTTTATAAGT+GGG | - | tig0026810:8304-8323 | Msa1431160:CDS | 25.0% |
| !!! | GATTGAAAGGTATTAGAATT+TGG | + | tig0026810:8341-8360 | None:intergenic | 25.0% |
| AGAAGAAGTAACAATCTTAG+AGG | - | tig0026810:6859-6878 | Msa1431160:CDS | 30.0% | |
| !! | AGCTGATTTTCAAAGAATTG+TGG | - | tig0026810:6892-6911 | Msa1431160:CDS | 30.0% |
| AAAACATCCGGATTCAATAT+TGG | - | tig0026810:7114-7133 | Msa1431160:intron | 30.0% | |
| GTAAACAACATCATCATACT+CGG | + | tig0026810:7200-7219 | None:intergenic | 30.0% | |
| ! | AGTATGATGATGTTGTTTAC+TGG | - | tig0026810:7200-7219 | Msa1431160:CDS | 30.0% |
| ! | ATGTTGTTTACTGGAAACAT+CGG | - | tig0026810:7209-7228 | Msa1431160:CDS | 30.0% |
| ! | CCTCTTTTAAACTTGGAAAA+TGG | + | tig0026810:7650-7669 | None:intergenic | 30.0% |
| ! | CCATTTTCCAAGTTTAAAAG+AGG | - | tig0026810:7647-7666 | Msa1431160:CDS | 30.0% |
| ! | TTTTCCAAGTTTAAAAGAGG+AGG | - | tig0026810:7650-7669 | Msa1431160:CDS | 30.0% |
| ! | ATTACCTCCTCTTTTAAACT+TGG | + | tig0026810:7657-7676 | None:intergenic | 30.0% |
| TTACTTGCACATAAATTTCC+AGG | - | tig0026810:7813-7832 | Msa1431160:intron | 30.0% | |
| ! | AACGGATGTTGAAATTTTCA+CGG | - | tig0026810:7849-7868 | Msa1431160:intron | 30.0% |
| !! | AAAGTTATTTCCCTTTTTGC+AGG | + | tig0026810:7931-7950 | None:intergenic | 30.0% |
| AACAATTGGAGTAAACCATA+TGG | - | tig0026810:8020-8039 | Msa1431160:intron | 30.0% | |
| ACAATTGGAGTAAACCATAT+GGG | - | tig0026810:8021-8040 | Msa1431160:intron | 30.0% | |
| ! | AGTAACAGTTTTTACCTGAT+CGG | + | tig0026810:8058-8077 | None:intergenic | 30.0% |
| ACCTGCATTGTCTTAAAATT+TGG | - | tig0026810:8093-8112 | Msa1431160:intron | 30.0% | |
| CCTGCATTGTCTTAAAATTT+GGG | - | tig0026810:8094-8113 | Msa1431160:intron | 30.0% | |
| ! | ATTTGTTAGTAGTCTCACAT+TGG | - | tig0026810:8280-8299 | Msa1431160:CDS | 30.0% |
| AGGATATGTGTTTATAAGTG+GGG | - | tig0026810:8305-8324 | Msa1431160:CDS | 30.0% | |
| TGCACAAAAACAAGATTGAA+AGG | + | tig0026810:8354-8373 | None:intergenic | 30.0% | |
| TAATTTCGACAAACAATTGC+AGG | - | tig0026810:8386-8405 | Msa1431160:CDS | 30.0% | |
| GGTGAGAAAAAGAGAAAAAA+TGG | - | tig0026810:8407-8426 | Msa1431160:CDS | 30.0% | |
| AGAAAAAATGGCAAAGCTAA+GGG | - | tig0026810:8419-8438 | Msa1431160:CDS | 30.0% | |
| TTTATTAAGTTCCGTTTCCT+TGG | + | tig0026810:8466-8485 | None:intergenic | 30.0% | |
| CAAAACTTGATAGAGAACAA+AGG | - | tig0026810:8690-8709 | Msa1431160:CDS | 30.0% | |
| AGAAGAAGTAACAATCTTAG+AGG | - | tig0026810:6859-6878 | Msa1431160:CDS | 30.0% | |
| !! | AGCTGATTTTCAAAGAATTG+TGG | - | tig0026810:6892-6911 | Msa1431160:CDS | 30.0% |
| AAAACATCCGGATTCAATAT+TGG | - | tig0026810:7114-7133 | Msa1431160:intron | 30.0% | |
| GTAAACAACATCATCATACT+CGG | + | tig0026810:7200-7219 | None:intergenic | 30.0% | |
| ! | AGTATGATGATGTTGTTTAC+TGG | - | tig0026810:7200-7219 | Msa1431160:CDS | 30.0% |
| ! | ATGTTGTTTACTGGAAACAT+CGG | - | tig0026810:7209-7228 | Msa1431160:CDS | 30.0% |
| ! | CCTCTTTTAAACTTGGAAAA+TGG | + | tig0026810:7650-7669 | None:intergenic | 30.0% |
| ! | CCATTTTCCAAGTTTAAAAG+AGG | - | tig0026810:7647-7666 | Msa1431160:CDS | 30.0% |
| ! | TTTTCCAAGTTTAAAAGAGG+AGG | - | tig0026810:7650-7669 | Msa1431160:CDS | 30.0% |
| ! | ATTACCTCCTCTTTTAAACT+TGG | + | tig0026810:7657-7676 | None:intergenic | 30.0% |
| TTACTTGCACATAAATTTCC+AGG | - | tig0026810:7813-7832 | Msa1431160:intron | 30.0% | |
| ! | AACGGATGTTGAAATTTTCA+CGG | - | tig0026810:7849-7868 | Msa1431160:intron | 30.0% |
| !! | AAAGTTATTTCCCTTTTTGC+AGG | + | tig0026810:7931-7950 | None:intergenic | 30.0% |
| AACAATTGGAGTAAACCATA+TGG | - | tig0026810:8020-8039 | Msa1431160:intron | 30.0% | |
| ACAATTGGAGTAAACCATAT+GGG | - | tig0026810:8021-8040 | Msa1431160:intron | 30.0% | |
| ! | AGTAACAGTTTTTACCTGAT+CGG | + | tig0026810:8058-8077 | None:intergenic | 30.0% |
| ACCTGCATTGTCTTAAAATT+TGG | - | tig0026810:8093-8112 | Msa1431160:intron | 30.0% | |
| CCTGCATTGTCTTAAAATTT+GGG | - | tig0026810:8094-8113 | Msa1431160:intron | 30.0% | |
| ! | ATTTGTTAGTAGTCTCACAT+TGG | - | tig0026810:8280-8299 | Msa1431160:CDS | 30.0% |
| AGGATATGTGTTTATAAGTG+GGG | - | tig0026810:8305-8324 | Msa1431160:CDS | 30.0% | |
| TGCACAAAAACAAGATTGAA+AGG | + | tig0026810:8354-8373 | None:intergenic | 30.0% | |
| TAATTTCGACAAACAATTGC+AGG | - | tig0026810:8386-8405 | Msa1431160:CDS | 30.0% | |
| GGTGAGAAAAAGAGAAAAAA+TGG | - | tig0026810:8407-8426 | Msa1431160:CDS | 30.0% | |
| AGAAAAAATGGCAAAGCTAA+GGG | - | tig0026810:8419-8438 | Msa1431160:CDS | 30.0% | |
| TTTATTAAGTTCCGTTTCCT+TGG | + | tig0026810:8466-8485 | None:intergenic | 30.0% | |
| CAAAACTTGATAGAGAACAA+AGG | - | tig0026810:8690-8709 | Msa1431160:CDS | 30.0% | |
| TAGCTAATCTCACGAAACAT+TGG | - | tig0026810:6951-6970 | Msa1431160:CDS | 35.0% | |
| AGCTAATCTCACGAAACATT+GGG | - | tig0026810:6952-6971 | Msa1431160:CDS | 35.0% | |
| ACACCATCCAATATTGAATC+CGG | + | tig0026810:7124-7143 | None:intergenic | 35.0% | |
| ACGAGATATGGAAAAACGAT+TGG | - | tig0026810:7234-7253 | Msa1431160:intron | 35.0% | |
| AGATATGGAAAAACGATTGG+AGG | - | tig0026810:7237-7256 | Msa1431160:intron | 35.0% | |
| GATATGGAAAAACGATTGGA+GGG | - | tig0026810:7238-7257 | Msa1431160:intron | 35.0% | |
| CAAAATGCACCTGTTGTTAT+AGG | - | tig0026810:7394-7413 | Msa1431160:intron | 35.0% | |
| ATAAATTTCCAGGACCTCAT+AGG | - | tig0026810:7823-7842 | Msa1431160:intron | 35.0% | |
| ! | ACGGATGTTGAAATTTTCAC+GGG | - | tig0026810:7850-7869 | Msa1431160:intron | 35.0% |
| ! | AAGAGAGAAGTAATGGAGAA+AGG | - | tig0026810:7901-7920 | Msa1431160:intron | 35.0% |
| AGAAAGGAATACCTGCAAAA+AGG | - | tig0026810:7917-7936 | Msa1431160:intron | 35.0% | |
| GAAAGGAATACCTGCAAAAA+GGG | - | tig0026810:7918-7937 | Msa1431160:intron | 35.0% | |
| !!! | ACTTTTGAGACAGAACTGTT+TGG | - | tig0026810:7946-7965 | Msa1431160:intron | 35.0% |
| !!! | CCCAAATTTTAAGACAATGC+AGG | + | tig0026810:8097-8116 | None:intergenic | 35.0% |
| !!! | CCTTACAAGTTGGTTTTGTA+AGG | + | tig0026810:8135-8154 | None:intergenic | 35.0% |
| CCTTACAAAACCAACTTGTA+AGG | - | tig0026810:8132-8151 | Msa1431160:intron | 35.0% | |
| AAAACCAACTTGTAAGGTCT+GGG | - | tig0026810:8138-8157 | Msa1431160:intron | 35.0% | |
| TTAGTAGTCTCACATTGGAT+AGG | - | tig0026810:8285-8304 | Msa1431160:CDS | 35.0% | |
| GGATATGTGTTTATAAGTGG+GGG | - | tig0026810:8306-8325 | Msa1431160:CDS | 35.0% | |
| GAGAAAAAATGGCAAAGCTA+AGG | - | tig0026810:8418-8437 | Msa1431160:CDS | 35.0% | |
| ATTGTCTCCTCTATTACAAG+GGG | + | tig0026810:8581-8600 | None:intergenic | 35.0% | |
| CATTGTCTCCTCTATTACAA+GGG | + | tig0026810:8582-8601 | None:intergenic | 35.0% | |
| TCATTGTCTCCTCTATTACA+AGG | + | tig0026810:8583-8602 | None:intergenic | 35.0% | |
| ATGCTAACAACATCAGAAAG+TGG | + | tig0026810:8650-8669 | None:intergenic | 35.0% | |
| ACTTTCTGATGTTGTTAGCA+TGG | - | tig0026810:8649-8668 | Msa1431160:CDS | 35.0% | |
| CAAATCTCCTGAAGATATCA+TGG | + | tig0026810:8729-8748 | None:intergenic | 35.0% | |
| CATGATATCTTCAGGAGATT+TGG | - | tig0026810:8727-8746 | Msa1431160:CDS | 35.0% | |
| TGATATACTTGATCCTTCCA+AGG | - | tig0026810:8766-8785 | Msa1431160:CDS | 35.0% | |
| TAGCTAATCTCACGAAACAT+TGG | - | tig0026810:6951-6970 | Msa1431160:CDS | 35.0% | |
| AGCTAATCTCACGAAACATT+GGG | - | tig0026810:6952-6971 | Msa1431160:CDS | 35.0% | |
| ACACCATCCAATATTGAATC+CGG | + | tig0026810:7124-7143 | None:intergenic | 35.0% | |
| ACGAGATATGGAAAAACGAT+TGG | - | tig0026810:7234-7253 | Msa1431160:intron | 35.0% | |
| AGATATGGAAAAACGATTGG+AGG | - | tig0026810:7237-7256 | Msa1431160:intron | 35.0% | |
| GATATGGAAAAACGATTGGA+GGG | - | tig0026810:7238-7257 | Msa1431160:intron | 35.0% | |
| CAAAATGCACCTGTTGTTAT+AGG | - | tig0026810:7394-7413 | Msa1431160:intron | 35.0% | |
| ATAAATTTCCAGGACCTCAT+AGG | - | tig0026810:7823-7842 | Msa1431160:intron | 35.0% | |
| ! | ACGGATGTTGAAATTTTCAC+GGG | - | tig0026810:7850-7869 | Msa1431160:intron | 35.0% |
| ! | AAGAGAGAAGTAATGGAGAA+AGG | - | tig0026810:7901-7920 | Msa1431160:intron | 35.0% |
| AGAAAGGAATACCTGCAAAA+AGG | - | tig0026810:7917-7936 | Msa1431160:intron | 35.0% | |
| GAAAGGAATACCTGCAAAAA+GGG | - | tig0026810:7918-7937 | Msa1431160:intron | 35.0% | |
| !!! | ACTTTTGAGACAGAACTGTT+TGG | - | tig0026810:7946-7965 | Msa1431160:intron | 35.0% |
| !!! | CCCAAATTTTAAGACAATGC+AGG | + | tig0026810:8097-8116 | None:intergenic | 35.0% |
| !!! | CCTTACAAGTTGGTTTTGTA+AGG | + | tig0026810:8135-8154 | None:intergenic | 35.0% |
| CCTTACAAAACCAACTTGTA+AGG | - | tig0026810:8132-8151 | Msa1431160:intron | 35.0% | |
| AAAACCAACTTGTAAGGTCT+GGG | - | tig0026810:8138-8157 | Msa1431160:intron | 35.0% | |
| TTAGTAGTCTCACATTGGAT+AGG | - | tig0026810:8285-8304 | Msa1431160:CDS | 35.0% | |
| GGATATGTGTTTATAAGTGG+GGG | - | tig0026810:8306-8325 | Msa1431160:CDS | 35.0% | |
| GAGAAAAAATGGCAAAGCTA+AGG | - | tig0026810:8418-8437 | Msa1431160:CDS | 35.0% | |
| ATTGTCTCCTCTATTACAAG+GGG | + | tig0026810:8581-8600 | None:intergenic | 35.0% | |
| CATTGTCTCCTCTATTACAA+GGG | + | tig0026810:8582-8601 | None:intergenic | 35.0% | |
| TCATTGTCTCCTCTATTACA+AGG | + | tig0026810:8583-8602 | None:intergenic | 35.0% | |
| ATGCTAACAACATCAGAAAG+TGG | + | tig0026810:8650-8669 | None:intergenic | 35.0% | |
| ACTTTCTGATGTTGTTAGCA+TGG | - | tig0026810:8649-8668 | Msa1431160:CDS | 35.0% | |
| CAAATCTCCTGAAGATATCA+TGG | + | tig0026810:8729-8748 | None:intergenic | 35.0% | |
| CATGATATCTTCAGGAGATT+TGG | - | tig0026810:8727-8746 | Msa1431160:CDS | 35.0% | |
| TGATATACTTGATCCTTCCA+AGG | - | tig0026810:8766-8785 | Msa1431160:CDS | 35.0% | |
| ! | GAAACATTGGGAGTATAAGC+AGG | - | tig0026810:6964-6983 | Msa1431160:CDS | 40.0% |
| TCGACAACCTTAGCAAACAA+AGG | - | tig0026810:7017-7036 | Msa1431160:CDS | 40.0% | |
| CGACAACCTTAGCAAACAAA+GGG | - | tig0026810:7018-7037 | Msa1431160:CDS | 40.0% | |
| GGATTTGAGGAAGAAAGCTA+CGG | - | tig0026810:7085-7104 | Msa1431160:intron | 40.0% | |
| CATCCGGATTCAATATTGGA+TGG | - | tig0026810:7118-7137 | Msa1431160:intron | 40.0% | |
| !! | TATTGGATGGTGTTGCAATC+AGG | - | tig0026810:7131-7150 | Msa1431160:intron | 40.0% |
| !! | AACGATTGGAGGGAAGTATT+CGG | - | tig0026810:7248-7267 | Msa1431160:intron | 40.0% |
| TGAAAGACAATCATCACCTG+TGG | - | tig0026810:7318-7337 | Msa1431160:intron | 40.0% | |
| ! | TGCCATTTCAATGAATTCCC+AGG | - | tig0026810:7593-7612 | Msa1431160:intron | 40.0% |
| GTCCTGGGAATTCATTGAAA+TGG | + | tig0026810:7598-7617 | None:intergenic | 40.0% | |
| GAGGAGGTAATGATTCTTGT+TGG | - | tig0026810:7666-7685 | Msa1431160:CDS | 40.0% | |
| GAGGTAATGATTCTTGTTGG+AGG | - | tig0026810:7669-7688 | Msa1431160:CDS | 40.0% | |
| !! | CAACATCCGTTTTTCCTATG+AGG | + | tig0026810:7840-7859 | None:intergenic | 40.0% |
| ! | GTTGAAATTTTCACGGGATC+AGG | - | tig0026810:7856-7875 | Msa1431160:intron | 40.0% |
| TGGAGTAAACCATATGGGAA+TGG | - | tig0026810:8026-8045 | Msa1431160:intron | 40.0% | |
| ! | CGGTTATTTCCATTCCCATA+TGG | + | tig0026810:8038-8057 | None:intergenic | 40.0% |
| !!! | TGGTTTTGTAAGGATGAGTC+AGG | + | tig0026810:8125-8144 | None:intergenic | 40.0% |
| CAAAACCAACTTGTAAGGTC+TGG | - | tig0026810:8137-8156 | Msa1431160:intron | 40.0% | |
| AAGCCATATCTCATCCAATG+TGG | - | tig0026810:8187-8206 | Msa1431160:intron | 40.0% | |
| TGACCTTAGTTGCCTGATAT+CGG | + | tig0026810:8228-8247 | None:intergenic | 40.0% | |
| AATTGCAGTTCAGAAAGCCA+AGG | - | tig0026810:8446-8465 | Msa1431160:CDS | 40.0% | |
| AGTTCAGAAAGCCAAGGAAA+CGG | - | tig0026810:8452-8471 | Msa1431160:CDS | 40.0% | |
| TTCTTGACCCCTTGTAATAG+AGG | - | tig0026810:8571-8590 | Msa1431160:CDS | 40.0% | |
| AATGAGAGCAAAACAAGTGC+TGG | - | tig0026810:8598-8617 | Msa1431160:CDS | 40.0% | |
| TTGGATGCCATGATATCTTC+AGG | - | tig0026810:8719-8738 | Msa1431160:CDS | 40.0% | |
| ! | GAAACATTGGGAGTATAAGC+AGG | - | tig0026810:6964-6983 | Msa1431160:CDS | 40.0% |
| TCGACAACCTTAGCAAACAA+AGG | - | tig0026810:7017-7036 | Msa1431160:CDS | 40.0% | |
| CGACAACCTTAGCAAACAAA+GGG | - | tig0026810:7018-7037 | Msa1431160:CDS | 40.0% | |
| GGATTTGAGGAAGAAAGCTA+CGG | - | tig0026810:7085-7104 | Msa1431160:intron | 40.0% | |
| CATCCGGATTCAATATTGGA+TGG | - | tig0026810:7118-7137 | Msa1431160:intron | 40.0% | |
| !! | TATTGGATGGTGTTGCAATC+AGG | - | tig0026810:7131-7150 | Msa1431160:intron | 40.0% |
| !! | AACGATTGGAGGGAAGTATT+CGG | - | tig0026810:7248-7267 | Msa1431160:intron | 40.0% |
| TGAAAGACAATCATCACCTG+TGG | - | tig0026810:7318-7337 | Msa1431160:intron | 40.0% | |
| ! | TGCCATTTCAATGAATTCCC+AGG | - | tig0026810:7593-7612 | Msa1431160:intron | 40.0% |
| GTCCTGGGAATTCATTGAAA+TGG | + | tig0026810:7598-7617 | None:intergenic | 40.0% | |
| GAGGAGGTAATGATTCTTGT+TGG | - | tig0026810:7666-7685 | Msa1431160:CDS | 40.0% | |
| GAGGTAATGATTCTTGTTGG+AGG | - | tig0026810:7669-7688 | Msa1431160:CDS | 40.0% | |
| !! | CAACATCCGTTTTTCCTATG+AGG | + | tig0026810:7840-7859 | None:intergenic | 40.0% |
| ! | GTTGAAATTTTCACGGGATC+AGG | - | tig0026810:7856-7875 | Msa1431160:intron | 40.0% |
| TGGAGTAAACCATATGGGAA+TGG | - | tig0026810:8026-8045 | Msa1431160:intron | 40.0% | |
| ! | CGGTTATTTCCATTCCCATA+TGG | + | tig0026810:8038-8057 | None:intergenic | 40.0% |
| !!! | TGGTTTTGTAAGGATGAGTC+AGG | + | tig0026810:8125-8144 | None:intergenic | 40.0% |
| CAAAACCAACTTGTAAGGTC+TGG | - | tig0026810:8137-8156 | Msa1431160:intron | 40.0% | |
| AAGCCATATCTCATCCAATG+TGG | - | tig0026810:8187-8206 | Msa1431160:intron | 40.0% | |
| TGACCTTAGTTGCCTGATAT+CGG | + | tig0026810:8228-8247 | None:intergenic | 40.0% | |
| AATTGCAGTTCAGAAAGCCA+AGG | - | tig0026810:8446-8465 | Msa1431160:CDS | 40.0% | |
| AGTTCAGAAAGCCAAGGAAA+CGG | - | tig0026810:8452-8471 | Msa1431160:CDS | 40.0% | |
| TTCTTGACCCCTTGTAATAG+AGG | - | tig0026810:8571-8590 | Msa1431160:CDS | 40.0% | |
| AATGAGAGCAAAACAAGTGC+TGG | - | tig0026810:8598-8617 | Msa1431160:CDS | 40.0% | |
| TTGGATGCCATGATATCTTC+AGG | - | tig0026810:8719-8738 | Msa1431160:CDS | 40.0% | |
| CAACCTTAGCAAACAAAGGG+AGG | - | tig0026810:7021-7040 | Msa1431160:CDS | 45.0% | |
| ! | CTTCCTCCCTTTGTTTGCTA+AGG | + | tig0026810:7027-7046 | None:intergenic | 45.0% |
| TTTGAGGAAGAAAGCTACGG+TGG | - | tig0026810:7088-7107 | Msa1431160:intron | 45.0% | |
| CTACGGTGGAGAAAAACATC+CGG | - | tig0026810:7102-7121 | Msa1431160:intron | 45.0% | |
| GAAACATCGGTCACGAGATA+TGG | - | tig0026810:7222-7241 | Msa1431160:intron | 45.0% | |
| ATCTGTGACAGTTCTTCCAC+AGG | + | tig0026810:7337-7356 | None:intergenic | 45.0% | |
| ACCTGTTGTTATAGGCCATC+AGG | - | tig0026810:7402-7421 | Msa1431160:intron | 45.0% | |
| ACCTGATGGCCTATAACAAC+AGG | + | tig0026810:7406-7425 | None:intergenic | 45.0% | |
| ACTCGTTGTAGTGTACCTGA+TGG | + | tig0026810:7420-7439 | None:intergenic | 45.0% | |
| ATAGCGCAACTCTTTGTCCT+GGG | + | tig0026810:7613-7632 | None:intergenic | 45.0% | |
| !! | TTGTTGGAGGTCTTGTTGCA+AGG | - | tig0026810:7682-7701 | Msa1431160:CDS | 45.0% |
| CCAGGACCTCATAGGAAAAA+CGG | - | tig0026810:7831-7850 | Msa1431160:intron | 45.0% | |
| TGCAGAACCTGTGTTTAGCA+AGG | - | tig0026810:7990-8009 | Msa1431160:CDS | 45.0% | |
| AGCAAGGCAGGAGAAACAAT+TGG | - | tig0026810:8006-8025 | Msa1431160:CDS | 45.0% | |
| GGGAATGGAAATAACCGATC+AGG | - | tig0026810:8041-8060 | Msa1431160:intron | 45.0% | |
| AGGCCACATTGGATGAGATA+TGG | + | tig0026810:8193-8212 | None:intergenic | 45.0% | |
| TCACACTTCATAGGCCACAT+TGG | + | tig0026810:8204-8223 | None:intergenic | 45.0% | |
| GATATCGGGTCACACTTCAT+AGG | + | tig0026810:8213-8232 | None:intergenic | 45.0% | |
| ATGAAGTGTGACCCGATATC+AGG | - | tig0026810:8213-8232 | Msa1431160:intron | 45.0% | |
| GACCTTAGTTGCCTGATATC+GGG | + | tig0026810:8227-8246 | None:intergenic | 45.0% | |
| TAGAGAACAAAGGCAGCTCT+TGG | - | tig0026810:8700-8719 | Msa1431160:CDS | 45.0% | |
| CAACCTTAGCAAACAAAGGG+AGG | - | tig0026810:7021-7040 | Msa1431160:CDS | 45.0% | |
| ! | CTTCCTCCCTTTGTTTGCTA+AGG | + | tig0026810:7027-7046 | None:intergenic | 45.0% |
| TTTGAGGAAGAAAGCTACGG+TGG | - | tig0026810:7088-7107 | Msa1431160:intron | 45.0% | |
| CTACGGTGGAGAAAAACATC+CGG | - | tig0026810:7102-7121 | Msa1431160:intron | 45.0% | |
| GAAACATCGGTCACGAGATA+TGG | - | tig0026810:7222-7241 | Msa1431160:intron | 45.0% | |
| ATCTGTGACAGTTCTTCCAC+AGG | + | tig0026810:7337-7356 | None:intergenic | 45.0% | |
| ACCTGTTGTTATAGGCCATC+AGG | - | tig0026810:7402-7421 | Msa1431160:intron | 45.0% | |
| ACCTGATGGCCTATAACAAC+AGG | + | tig0026810:7406-7425 | None:intergenic | 45.0% | |
| ACTCGTTGTAGTGTACCTGA+TGG | + | tig0026810:7420-7439 | None:intergenic | 45.0% | |
| ATAGCGCAACTCTTTGTCCT+GGG | + | tig0026810:7613-7632 | None:intergenic | 45.0% | |
| !! | TTGTTGGAGGTCTTGTTGCA+AGG | - | tig0026810:7682-7701 | Msa1431160:CDS | 45.0% |
| CCAGGACCTCATAGGAAAAA+CGG | - | tig0026810:7831-7850 | Msa1431160:intron | 45.0% | |
| TGCAGAACCTGTGTTTAGCA+AGG | - | tig0026810:7990-8009 | Msa1431160:CDS | 45.0% | |
| AGCAAGGCAGGAGAAACAAT+TGG | - | tig0026810:8006-8025 | Msa1431160:CDS | 45.0% | |
| GGGAATGGAAATAACCGATC+AGG | - | tig0026810:8041-8060 | Msa1431160:intron | 45.0% | |
| AGGCCACATTGGATGAGATA+TGG | + | tig0026810:8193-8212 | None:intergenic | 45.0% | |
| TCACACTTCATAGGCCACAT+TGG | + | tig0026810:8204-8223 | None:intergenic | 45.0% | |
| GATATCGGGTCACACTTCAT+AGG | + | tig0026810:8213-8232 | None:intergenic | 45.0% | |
| ATGAAGTGTGACCCGATATC+AGG | - | tig0026810:8213-8232 | Msa1431160:intron | 45.0% | |
| GACCTTAGTTGCCTGATATC+GGG | + | tig0026810:8227-8246 | None:intergenic | 45.0% | |
| TAGAGAACAAAGGCAGCTCT+TGG | - | tig0026810:8700-8719 | Msa1431160:CDS | 45.0% | |
| TGTCGAGCTCTTCTCGAAGA+AGG | + | tig0026810:7003-7022 | None:intergenic | 50.0% | |
| GATAGCGCAACTCTTTGTCC+TGG | + | tig0026810:7614-7633 | None:intergenic | 50.0% | |
| !! | CCGTTTTTCCTATGAGGTCC+TGG | + | tig0026810:7834-7853 | None:intergenic | 50.0% |
| GAACCTGTGTTTAGCAAGGC+AGG | - | tig0026810:7994-8013 | Msa1431160:CDS | 50.0% | |
| TCTCCTGCCTTGCTAAACAC+AGG | + | tig0026810:8000-8019 | None:intergenic | 50.0% | |
| GCAACCCAGACCTTACAAGT+TGG | + | tig0026810:8145-8164 | None:intergenic | 50.0% | |
| GACCCGATATCAGGCAACTA+AGG | - | tig0026810:8222-8241 | Msa1431160:CDS | 50.0% | |
| ACGCTTCAGATGTCTAGTCC+TGG | - | tig0026810:8247-8266 | Msa1431160:CDS | 50.0% | |
| CGCTTCAGATGTCTAGTCCT+GGG | - | tig0026810:8248-8267 | Msa1431160:CDS | 50.0% | |
| GCTTCAGATGTCTAGTCCTG+GGG | - | tig0026810:8249-8268 | Msa1431160:CDS | 50.0% | |
| AGATGTCTAGTCCTGGGGTA+AGG | - | tig0026810:8254-8273 | Msa1431160:CDS | 50.0% | |
| GATGTCTAGTCCTGGGGTAA+GGG | - | tig0026810:8255-8274 | Msa1431160:CDS | 50.0% | |
| TAACAAATCGCCCTTACCCC+AGG | + | tig0026810:8268-8287 | None:intergenic | 50.0% | |
| TGATCCTTCCAAGGCTGAGT+CGG | - | tig0026810:8775-8794 | Msa1431160:CDS | 50.0% | |
| TGTCGAGCTCTTCTCGAAGA+AGG | + | tig0026810:7003-7022 | None:intergenic | 50.0% | |
| GATAGCGCAACTCTTTGTCC+TGG | + | tig0026810:7614-7633 | None:intergenic | 50.0% | |
| !! | CCGTTTTTCCTATGAGGTCC+TGG | + | tig0026810:7834-7853 | None:intergenic | 50.0% |
| GAACCTGTGTTTAGCAAGGC+AGG | - | tig0026810:7994-8013 | Msa1431160:CDS | 50.0% | |
| TCTCCTGCCTTGCTAAACAC+AGG | + | tig0026810:8000-8019 | None:intergenic | 50.0% | |
| GCAACCCAGACCTTACAAGT+TGG | + | tig0026810:8145-8164 | None:intergenic | 50.0% | |
| GACCCGATATCAGGCAACTA+AGG | - | tig0026810:8222-8241 | Msa1431160:CDS | 50.0% | |
| ACGCTTCAGATGTCTAGTCC+TGG | - | tig0026810:8247-8266 | Msa1431160:CDS | 50.0% | |
| CGCTTCAGATGTCTAGTCCT+GGG | - | tig0026810:8248-8267 | Msa1431160:CDS | 50.0% | |
| GCTTCAGATGTCTAGTCCTG+GGG | - | tig0026810:8249-8268 | Msa1431160:CDS | 50.0% | |
| AGATGTCTAGTCCTGGGGTA+AGG | - | tig0026810:8254-8273 | Msa1431160:CDS | 50.0% | |
| GATGTCTAGTCCTGGGGTAA+GGG | - | tig0026810:8255-8274 | Msa1431160:CDS | 50.0% | |
| TAACAAATCGCCCTTACCCC+AGG | + | tig0026810:8268-8287 | None:intergenic | 50.0% | |
| TGATCCTTCCAAGGCTGAGT+CGG | - | tig0026810:8775-8794 | Msa1431160:CDS | 50.0% | |
| TTTCACGGGATCAGGTGCGA+AGG | - | tig0026810:7864-7883 | Msa1431160:intron | 55.0% | |
| GATCCTTCCAAGGCTGAGTC+GGG | - | tig0026810:8776-8795 | Msa1431160:CDS | 55.0% | |
| TAACCCGACTCAGCCTTGGA+AGG | + | tig0026810:8782-8801 | None:intergenic | 55.0% | |
| TTTCACGGGATCAGGTGCGA+AGG | - | tig0026810:7864-7883 | Msa1431160:intron | 55.0% | |
| GATCCTTCCAAGGCTGAGTC+GGG | - | tig0026810:8776-8795 | Msa1431160:CDS | 55.0% | |
| TAACCCGACTCAGCCTTGGA+AGG | + | tig0026810:8782-8801 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0026810 | gene | 6842 | 8802 | 6842 | ID=Msa1431160;Name=Msa1431160 |
| tig0026810 | mRNA | 6842 | 8802 | 6842 | ID=Msa1431160-mRNA-1;Parent=Msa1431160;Name=Msa1431160-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|5|0|379 |
| tig0026810 | exon | 8221 | 8802 | 8221 | ID=Msa1431160-mRNA-1:exon:7463;Parent=Msa1431160-mRNA-1 |
| tig0026810 | exon | 7973 | 8029 | 7973 | ID=Msa1431160-mRNA-1:exon:7462;Parent=Msa1431160-mRNA-1 |
| tig0026810 | exon | 7615 | 7809 | 7615 | ID=Msa1431160-mRNA-1:exon:7461;Parent=Msa1431160-mRNA-1 |
| tig0026810 | exon | 7143 | 7236 | 7143 | ID=Msa1431160-mRNA-1:exon:7460;Parent=Msa1431160-mRNA-1 |
| tig0026810 | exon | 6842 | 7053 | 6842 | ID=Msa1431160-mRNA-1:exon:7459;Parent=Msa1431160-mRNA-1 |
| tig0026810 | CDS | 8221 | 8802 | 8221 | ID=Msa1431160-mRNA-1:cds;Parent=Msa1431160-mRNA-1 |
| tig0026810 | CDS | 7973 | 8029 | 7973 | ID=Msa1431160-mRNA-1:cds;Parent=Msa1431160-mRNA-1 |
| tig0026810 | CDS | 7615 | 7809 | 7615 | ID=Msa1431160-mRNA-1:cds;Parent=Msa1431160-mRNA-1 |
| tig0026810 | CDS | 7143 | 7236 | 7143 | ID=Msa1431160-mRNA-1:cds;Parent=Msa1431160-mRNA-1 |
| tig0026810 | CDS | 6842 | 7053 | 6842 | ID=Msa1431160-mRNA-1:cds;Parent=Msa1431160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
