Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231720 | AET01513.1 | 81.677 | 322 | 19 | 2 | 1 | 322 | 1 | 282 | 0.0 | 528 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231720 | sp|Q8L5A7|SOT15_ARATH | 49.405 | 336 | 161 | 4 | 6 | 338 | 22 | 351 | 2.89e-119 | 351 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231720 | G7LGN3 | 81.677 | 322 | 19 | 2 | 1 | 322 | 1 | 282 | 0.0 | 528 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa1231720 | 0.838663 | 2.515191e-57 | -8.615850e-47 |
| Msa0014590 | Msa1231720 | 0.802046 | 6.755109e-49 | -8.615850e-47 |
| Msa0063540 | Msa1231720 | 0.823602 | 1.267733e-53 | -8.615850e-47 |
| Msa0087900 | Msa1231720 | 0.807250 | 5.541375e-50 | -8.615850e-47 |
| Msa0108350 | Msa1231720 | 0.816382 | 5.691687e-52 | -8.615850e-47 |
| Msa0609460 | Msa1231720 | 0.800977 | 1.119071e-48 | -8.615850e-47 |
| Msa0616300 | Msa1231720 | 0.844983 | 5.391129e-59 | -8.615850e-47 |
| Msa0628200 | Msa1231720 | 0.812258 | 4.640731e-51 | -8.615850e-47 |
| Msa0631700 | Msa1231720 | 0.821145 | 4.716575e-53 | -8.615850e-47 |
| Msa0632980 | Msa1231720 | 0.822166 | 2.739737e-53 | -8.615850e-47 |
| Msa0633940 | Msa1231720 | 0.851952 | 6.346445e-61 | -8.615850e-47 |
| Msa0633970 | Msa1231720 | 0.849202 | 3.762039e-60 | -8.615850e-47 |
| Msa0634290 | Msa1231720 | 0.801763 | 7.723581e-49 | -8.615850e-47 |
| Msa0639410 | Msa1231720 | 0.803630 | 3.180598e-49 | -8.615850e-47 |
| Msa0643190 | Msa1231720 | 0.802604 | 5.185376e-49 | -8.615850e-47 |
| Msa0643840 | Msa1231720 | 0.800440 | 1.440005e-48 | -8.615850e-47 |
| Msa0655800 | Msa1231720 | 0.808928 | 2.433296e-50 | -8.615850e-47 |
| Msa0670360 | Msa1231720 | 0.821482 | 3.943814e-53 | -8.615850e-47 |
| Msa0671640 | Msa1231720 | 0.818202 | 2.217008e-52 | -8.615850e-47 |
| Msa0715220 | Msa1231720 | 0.811689 | 6.174742e-51 | -8.615850e-47 |
| Msa0735140 | Msa1231720 | 0.809891 | 1.512030e-50 | -8.615850e-47 |
| Msa0741360 | Msa1231720 | 0.808983 | 2.368985e-50 | -8.615850e-47 |
| Msa0751960 | Msa1231720 | 0.820863 | 5.477490e-53 | -8.615850e-47 |
| Msa0768670 | Msa1231720 | 0.809585 | 1.759755e-50 | -8.615850e-47 |
| Msa0768720 | Msa1231720 | 0.806387 | 8.430937e-50 | -8.615850e-47 |
| Msa0777070 | Msa1231720 | 0.838280 | 3.158194e-57 | -8.615850e-47 |
| Msa0787860 | Msa1231720 | 0.815950 | 7.107221e-52 | -8.615850e-47 |
| Msa0806930 | Msa1231720 | 0.802196 | 6.290720e-49 | -8.615850e-47 |
| Msa0814160 | Msa1231720 | 0.833246 | 5.954756e-56 | -8.615850e-47 |
| Msa0816140 | Msa1231720 | 0.813770 | 2.163012e-51 | -8.615850e-47 |
| Msa0822410 | Msa1231720 | 0.810055 | 1.394412e-50 | -8.615850e-47 |
| Msa0824850 | Msa1231720 | 0.812323 | 4.492123e-51 | -8.615850e-47 |
| Msa0831890 | Msa1231720 | 0.805049 | 1.609989e-49 | -8.615850e-47 |
| Msa0123530 | Msa1231720 | 0.804283 | 2.326358e-49 | -8.615850e-47 |
| Msa0150000 | Msa1231720 | 0.810862 | 9.334025e-51 | -8.615850e-47 |
| Msa0150910 | Msa1231720 | 0.813263 | 2.795923e-51 | -8.615850e-47 |
| Msa0150920 | Msa1231720 | 0.837215 | 5.929348e-57 | -8.615850e-47 |
| Msa0163340 | Msa1231720 | 0.805545 | 1.267551e-49 | -8.615850e-47 |
| Msa0190670 | Msa1231720 | 0.802276 | 6.059281e-49 | -8.615850e-47 |
| Msa0190890 | Msa1231720 | 0.804088 | 2.554844e-49 | -8.615850e-47 |
| Msa0207640 | Msa1231720 | 0.807678 | 4.494792e-50 | -8.615850e-47 |
| Msa0209060 | Msa1231720 | 0.837190 | 6.016570e-57 | -8.615850e-47 |
| Msa0209520 | Msa1231720 | 0.803705 | 3.069282e-49 | -8.615850e-47 |
| Msa0220090 | Msa1231720 | 0.816969 | 4.203114e-52 | -8.615850e-47 |
| Msa0233210 | Msa1231720 | 0.810189 | 1.304151e-50 | -8.615850e-47 |
| Msa1225850 | Msa1231720 | 0.805897 | 1.069291e-49 | -8.615850e-47 |
| Msa1231720 | Msa1236680 | 0.806671 | 7.346637e-50 | -8.615850e-47 |
| Msa1231720 | Msa1294020 | 0.823238 | 1.542371e-53 | -8.615850e-47 |
| Msa1231720 | Msa1297390 | 0.800230 | 1.588665e-48 | -8.615850e-47 |
| Msa1231720 | Msa1298090 | 0.803019 | 4.257232e-49 | -8.615850e-47 |
| Msa1231720 | Msa1319010 | 0.809675 | 1.682896e-50 | -8.615850e-47 |
| Msa1231720 | Msa1322500 | 0.802670 | 5.025869e-49 | -8.615850e-47 |
| Msa1231720 | Msa1329740 | 0.801018 | 1.097176e-48 | -8.615850e-47 |
| Msa1231720 | Msa1340440 | 0.800921 | 1.148847e-48 | -8.615850e-47 |
| Msa1231720 | Msa1343590 | 0.801534 | 8.603791e-49 | -8.615850e-47 |
| Msa1231720 | Msa1355340 | 0.801511 | 8.698790e-49 | -8.615850e-47 |
| Msa1231720 | Msa1357860 | 0.808371 | 3.200235e-50 | -8.615850e-47 |
| Msa1231720 | Msa1406840 | 0.813761 | 2.173674e-51 | -8.615850e-47 |
| Msa1231720 | Msa1411550 | 0.844932 | 5.565594e-59 | -8.615850e-47 |
| Msa1231720 | Msa1429550 | 0.816688 | 4.860659e-52 | -8.615850e-47 |
| Msa1231720 | Msa1431160 | 0.809676 | 1.682412e-50 | -8.615850e-47 |
| Msa1231720 | Msa1445900 | 0.809232 | 2.094673e-50 | -8.615850e-47 |
| Msa1231720 | Msa1459610 | 0.833876 | 4.146394e-56 | -8.615850e-47 |
| Msa0366510 | Msa1231720 | 0.855598 | 5.665508e-62 | -8.615850e-47 |
| Msa0369990 | Msa1231720 | 0.801742 | 7.800837e-49 | -8.615850e-47 |
| Msa0374030 | Msa1231720 | 0.817899 | 2.596114e-52 | -8.615850e-47 |
| Msa0374040 | Msa1231720 | 0.816533 | 5.264517e-52 | -8.615850e-47 |
| Msa0391270 | Msa1231720 | 0.818384 | 2.016429e-52 | -8.615850e-47 |
| Msa0414480 | Msa1231720 | 0.845082 | 5.070191e-59 | -8.615850e-47 |
| Msa0444400 | Msa1231720 | 0.803920 | 2.768647e-49 | -8.615850e-47 |
| Msa0464310 | Msa1231720 | 0.811727 | 6.058706e-51 | -8.615850e-47 |
| Msa0469450 | Msa1231720 | 0.834688 | 2.593419e-56 | -8.615850e-47 |
| Msa0987640 | Msa1231720 | 0.821161 | 4.677270e-53 | -8.615850e-47 |
| Msa0993710 | Msa1231720 | 0.800765 | 1.236092e-48 | -8.615850e-47 |
| Msa0995110 | Msa1231720 | 0.809249 | 2.077020e-50 | -8.615850e-47 |
| Msa1006030 | Msa1231720 | 0.824102 | 9.681857e-54 | -8.615850e-47 |
| Msa1006170 | Msa1231720 | 0.808878 | 2.494570e-50 | -8.615850e-47 |
| Msa1009540 | Msa1231720 | 0.842477 | 2.524792e-58 | -8.615850e-47 |
| Msa1015940 | Msa1231720 | 0.800875 | 1.174047e-48 | -8.615850e-47 |
| Msa1018590 | Msa1231720 | 0.841200 | 5.489966e-58 | -8.615850e-47 |
| Msa1022490 | Msa1231720 | 0.829920 | 3.929983e-55 | -8.615850e-47 |
| Msa1022510 | Msa1231720 | 0.844116 | 9.226301e-59 | -8.615850e-47 |
| Msa1024350 | Msa1231720 | 0.834135 | 3.570215e-56 | -8.615850e-47 |
| Msa1024480 | Msa1231720 | 0.812453 | 4.206792e-51 | -8.615850e-47 |
| Msa1029860 | Msa1231720 | 0.807067 | 6.057490e-50 | -8.615850e-47 |
| Msa1030320 | Msa1231720 | 0.809902 | 1.503951e-50 | -8.615850e-47 |
| Msa1041910 | Msa1231720 | 0.816937 | 4.273237e-52 | -8.615850e-47 |
| Msa1048350 | Msa1231720 | 0.813235 | 2.835853e-51 | -8.615850e-47 |
| Msa1048390 | Msa1231720 | 0.807071 | 6.045934e-50 | -8.615850e-47 |
| Msa1048400 | Msa1231720 | 0.814467 | 1.518250e-51 | -8.615850e-47 |
| Msa1061670 | Msa1231720 | 0.830213 | 3.332803e-55 | -8.615850e-47 |
| Msa1064940 | Msa1231720 | 0.806283 | 8.866821e-50 | -8.615850e-47 |
| Msa1087370 | Msa1231720 | 0.808154 | 3.560479e-50 | -8.615850e-47 |
| Msa1087380 | Msa1231720 | 0.809545 | 1.794400e-50 | -8.615850e-47 |
| Msa1098100 | Msa1231720 | 0.819612 | 1.059864e-52 | -8.615850e-47 |
| Msa1100330 | Msa1231720 | 0.804550 | 2.047080e-49 | -8.615850e-47 |
| Msa1106680 | Msa1231720 | 0.840751 | 7.198955e-58 | -8.615850e-47 |
| Msa1106960 | Msa1231720 | 0.827640 | 1.399010e-54 | -8.615850e-47 |
| Msa0242830 | Msa1231720 | 0.816207 | 6.228555e-52 | -8.615850e-47 |
| Msa0272210 | Msa1231720 | 0.855275 | 7.038318e-62 | -8.615850e-47 |
| Msa0274250 | Msa1231720 | 0.806334 | 8.650918e-50 | -8.615850e-47 |
| Msa0278460 | Msa1231720 | 0.809347 | 1.979484e-50 | -8.615850e-47 |
| Msa0281190 | Msa1231720 | 0.826126 | 3.218430e-54 | -8.615850e-47 |
| Msa0287630 | Msa1231720 | 0.803979 | 2.691370e-49 | -8.615850e-47 |
| Msa0288540 | Msa1231720 | 0.837949 | 3.842087e-57 | -8.615850e-47 |
| Msa0299030 | Msa1231720 | 0.801139 | 1.036863e-48 | -8.615850e-47 |
| Msa0314440 | Msa1231720 | 0.810630 | 1.047408e-50 | -8.615850e-47 |
| Msa0326770 | Msa1231720 | 0.839248 | 1.774636e-57 | -8.615850e-47 |
| Msa0328090 | Msa1231720 | 0.810407 | 1.170710e-50 | -8.615850e-47 |
| Msa0346170 | Msa1231720 | 0.811272 | 7.606999e-51 | -8.615850e-47 |
| Msa1108560 | Msa1231720 | 0.804421 | 2.178007e-49 | -8.615850e-47 |
| Msa1138110 | Msa1231720 | 0.827317 | 1.672541e-54 | -8.615850e-47 |
| Msa1147030 | Msa1231720 | 0.811387 | 7.181305e-51 | -8.615850e-47 |
| Msa1148210 | Msa1231720 | 0.816936 | 4.275580e-52 | -8.615850e-47 |
| Msa1167960 | Msa1231720 | 0.835270 | 1.849758e-56 | -8.615850e-47 |
| Msa1170340 | Msa1231720 | 0.819593 | 1.070435e-52 | -8.615850e-47 |
| Msa0506160 | Msa1231720 | 0.827989 | 1.153573e-54 | -8.615850e-47 |
| Msa0515130 | Msa1231720 | 0.831030 | 2.102879e-55 | -8.615850e-47 |
| Msa0515150 | Msa1231720 | 0.824268 | 8.847556e-54 | -8.615850e-47 |
| Msa0515170 | Msa1231720 | 0.809997 | 1.435071e-50 | -8.615850e-47 |
| Msa0535570 | Msa1231720 | 0.839278 | 1.743495e-57 | -8.615850e-47 |
| Msa0536770 | Msa1231720 | 0.828079 | 1.097107e-54 | -8.615850e-47 |
| Msa0538440 | Msa1231720 | 0.816045 | 6.769035e-52 | -8.615850e-47 |
| Msa0538530 | Msa1231720 | 0.803676 | 3.111785e-49 | -8.615850e-47 |
| Msa0543740 | Msa1231720 | 0.811542 | 6.647245e-51 | -8.615850e-47 |
| Msa0555920 | Msa1231720 | 0.800047 | 1.731294e-48 | -8.615850e-47 |
| Msa0591490 | Msa1231720 | 0.849081 | 4.066186e-60 | -8.615850e-47 |
| Msa0593870 | Msa1231720 | 0.857356 | 1.725396e-62 | -8.615850e-47 |
| Msa0594330 | Msa1231720 | 0.805735 | 1.156386e-49 | -8.615850e-47 |
| Msa0594630 | Msa1231720 | 0.847899 | 8.634250e-60 | -8.615850e-47 |
| Msa0602050 | Msa1231720 | 0.802916 | 4.470953e-49 | -8.615850e-47 |
| Msa0854840 | Msa1231720 | 0.816162 | 6.375640e-52 | -8.615850e-47 |
| Msa0861730 | Msa1231720 | 0.833311 | 5.736355e-56 | -8.615850e-47 |
| Msa0863860 | Msa1231720 | 0.808376 | 3.192608e-50 | -8.615850e-47 |
| Msa0864160 | Msa1231720 | 0.817067 | 3.996885e-52 | -8.615850e-47 |
| Msa0891070 | Msa1231720 | 0.806685 | 7.294389e-50 | -8.615850e-47 |
| Msa0896920 | Msa1231720 | 0.821848 | 3.245731e-53 | -8.615850e-47 |
| Msa0913550 | Msa1231720 | 0.828125 | 1.069636e-54 | -8.615850e-47 |
| Msa0921180 | Msa1231720 | 0.808477 | 3.038798e-50 | -8.615850e-47 |
| Msa0941120 | Msa1231720 | 0.817913 | 2.577319e-52 | -8.615850e-47 |
| Msa0946010 | Msa1231720 | 0.856225 | 3.715222e-62 | -8.615850e-47 |
| Msa0959700 | Msa1231720 | 0.808518 | 2.977966e-50 | -8.615850e-47 |
| Msa0964510 | Msa1231720 | 0.811446 | 6.971400e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231720 | MtrunA17_Chr8g0340661 | 82.847 | 274 | 19 | 1 | 1 | 274 | 1 | 246 | 1.47e-165 | 461 |
| Msa1231720 | MtrunA17_Chr8g0353731 | 67.919 | 346 | 105 | 5 | 1 | 344 | 1 | 342 | 3.76e-165 | 464 |
| Msa1231720 | MtrunA17_Chr7g0215701 | 68.502 | 327 | 98 | 2 | 12 | 338 | 6 | 327 | 2.02e-158 | 447 |
| Msa1231720 | MtrunA17_Chr7g0215691 | 66.864 | 338 | 102 | 3 | 1 | 338 | 1 | 328 | 3.98e-157 | 443 |
| Msa1231720 | MtrunA17_Chr8g0353721 | 65.000 | 340 | 115 | 4 | 1 | 338 | 1 | 338 | 4.83e-156 | 441 |
| Msa1231720 | MtrunA17_Chr8g0351331 | 66.352 | 318 | 104 | 2 | 23 | 338 | 8 | 324 | 1.06e-153 | 434 |
| Msa1231720 | MtrunA17_Chr8g0353591 | 66.981 | 318 | 102 | 3 | 22 | 338 | 6 | 321 | 1.26e-152 | 432 |
| Msa1231720 | MtrunA17_Chr3g0081701 | 62.579 | 318 | 113 | 4 | 22 | 338 | 20 | 332 | 2.63e-140 | 401 |
| Msa1231720 | MtrunA17_Chr8g0354381 | 70.980 | 255 | 74 | 0 | 84 | 338 | 1 | 255 | 1.69e-126 | 363 |
| Msa1231720 | MtrunA17_Chr3g0091901 | 47.416 | 329 | 166 | 4 | 10 | 336 | 4 | 327 | 5.13e-108 | 318 |
| Msa1231720 | MtrunA17_Chr8g0366191 | 49.524 | 315 | 153 | 4 | 22 | 335 | 16 | 325 | 1.38e-107 | 317 |
| Msa1231720 | MtrunA17_Chr3g0096081 | 49.211 | 317 | 154 | 4 | 22 | 336 | 18 | 329 | 1.29e-105 | 313 |
| Msa1231720 | MtrunA17_Chr8g0353921 | 65.421 | 214 | 74 | 0 | 125 | 338 | 27 | 240 | 1.32e-98 | 291 |
| Msa1231720 | MtrunA17_Chr8g0353691 | 62.617 | 214 | 80 | 0 | 125 | 338 | 27 | 240 | 1.80e-94 | 281 |
| Msa1231720 | MtrunA17_Chr8g0366181 | 43.987 | 316 | 150 | 4 | 22 | 336 | 16 | 305 | 1.68e-88 | 268 |
| Msa1231720 | MtrunA17_Chr8g0353861 | 65.556 | 180 | 53 | 4 | 5 | 184 | 2 | 172 | 2.39e-74 | 228 |
| Msa1231720 | MtrunA17_Chr8g0353871 | 65.432 | 162 | 51 | 4 | 84 | 243 | 2 | 160 | 2.29e-65 | 205 |
| Msa1231720 | MtrunA17_Chr8g0366241 | 52.459 | 183 | 86 | 1 | 155 | 337 | 22 | 203 | 2.44e-63 | 200 |
| Msa1231720 | MtrunA17_Chr3g0094771 | 47.959 | 196 | 101 | 1 | 140 | 335 | 18 | 212 | 2.46e-61 | 195 |
| Msa1231720 | MtrunA17_Chr8g0353841 | 70.588 | 102 | 30 | 0 | 232 | 333 | 1 | 102 | 2.42e-43 | 145 |
| Msa1231720 | MtrunA17_Chr8g0353631 | 65.289 | 121 | 41 | 1 | 218 | 338 | 4 | 123 | 2.47e-42 | 143 |
| Msa1231720 | MtrunA17_Chr8g0353671 | 47.191 | 89 | 29 | 1 | 227 | 315 | 44 | 114 | 2.88e-18 | 79.7 |
| Msa1231720 | MtrunA17_Chr8g0353671 | 65.306 | 49 | 14 | 1 | 84 | 129 | 1 | 49 | 2.34e-13 | 65.9 |
| Msa1231720 | MtrunA17_Chr3g0094781 | 47.368 | 76 | 39 | 1 | 22 | 97 | 17 | 91 | 1.84e-16 | 74.3 |
| Msa1231720 | MtrunA17_Chr8g0366171 | 40.000 | 70 | 35 | 2 | 127 | 196 | 2 | 64 | 2.62e-11 | 58.9 |
| Msa1231720 | MtrunA17_Chr8g0366161 | 46.667 | 60 | 32 | 0 | 236 | 295 | 3 | 62 | 3.03e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231720 | AT5G07010.1 | 49.405 | 336 | 161 | 4 | 6 | 338 | 22 | 351 | 2.94e-120 | 351 |
| Msa1231720 | AT5G07000.1 | 49.552 | 335 | 155 | 6 | 9 | 338 | 14 | 339 | 1.05e-114 | 337 |
| Msa1231720 | AT3G45070.1 | 45.223 | 314 | 166 | 4 | 24 | 336 | 8 | 316 | 3.29e-91 | 276 |
| Msa1231720 | AT3G45070.3 | 45.223 | 314 | 166 | 4 | 24 | 336 | 13 | 321 | 3.66e-91 | 276 |
| Msa1231720 | AT3G45070.2 | 45.223 | 314 | 166 | 4 | 24 | 336 | 40 | 348 | 7.75e-91 | 276 |
| Msa1231720 | AT5G43690.1 | 42.368 | 321 | 177 | 4 | 21 | 338 | 11 | 326 | 5.33e-90 | 273 |
| Msa1231720 | AT2G03770.1 | 43.533 | 317 | 165 | 5 | 23 | 338 | 14 | 317 | 4.99e-87 | 265 |
| Msa1231720 | AT1G13420.1 | 43.548 | 310 | 164 | 5 | 31 | 338 | 26 | 326 | 2.09e-86 | 264 |
| Msa1231720 | AT1G18590.1 | 41.975 | 324 | 173 | 5 | 21 | 338 | 24 | 338 | 3.07e-85 | 261 |
| Msa1231720 | AT3G45080.1 | 43.218 | 317 | 173 | 5 | 22 | 336 | 11 | 322 | 1.71e-82 | 254 |
| Msa1231720 | AT2G03760.1 | 41.888 | 339 | 173 | 6 | 2 | 338 | 3 | 319 | 2.86e-78 | 243 |
| Msa1231720 | AT1G74100.1 | 39.628 | 323 | 180 | 6 | 19 | 335 | 14 | 327 | 4.11e-78 | 243 |
| Msa1231720 | AT2G14920.1 | 40.836 | 311 | 177 | 6 | 31 | 338 | 22 | 328 | 1.11e-76 | 239 |
| Msa1231720 | AT2G03750.1 | 39.688 | 320 | 177 | 7 | 22 | 336 | 35 | 343 | 7.41e-76 | 238 |
| Msa1231720 | AT1G28170.1 | 42.122 | 311 | 166 | 6 | 33 | 338 | 20 | 321 | 4.17e-74 | 232 |
| Msa1231720 | AT4G26280.1 | 38.994 | 318 | 168 | 4 | 22 | 336 | 8 | 302 | 7.05e-74 | 231 |
| Msa1231720 | AT1G74090.1 | 38.769 | 325 | 186 | 5 | 19 | 338 | 26 | 342 | 2.38e-71 | 226 |
| Msa1231720 | AT1G13430.1 | 41.049 | 324 | 172 | 7 | 31 | 338 | 26 | 346 | 2.02e-70 | 223 |
| Msa1231720 | AT2G27570.1 | 36.392 | 316 | 140 | 5 | 22 | 336 | 11 | 266 | 4.39e-62 | 199 |
Find 58 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTTGAATACAATGTTTA+TGG | 0.114920 | 8_2:-8006859 | Msa1231720:CDS |
| CTCTCACTTCCTAGAATAAA+AGG | 0.164874 | 8_2:-8007126 | Msa1231720:CDS |
| TAAGTCCATTTGGTTCATTT+TGG | 0.191898 | 8_2:-8006588 | Msa1231720:CDS |
| AACCAAGTTGTGCCGGATTT+TGG | 0.212430 | 8_2:+8006976 | None:intergenic |
| CTTCTTGTCCATCCCTTGAT+TGG | 0.256892 | 8_2:+8007193 | None:intergenic |
| CCATCGTTTCTCTTCCTTAG+AGG | 0.272409 | 8_2:-8006923 | Msa1231720:CDS |
| AACAACAATATCATTGTCTT+TGG | 0.276447 | 8_2:+8007008 | None:intergenic |
| CTCTCCTCTTCTCTAGTAAA+AGG | 0.283220 | 8_2:+8006439 | None:intergenic |
| GGATTAACTGCTTAAATTCA+TGG | 0.322746 | 8_2:+8007148 | None:intergenic |
| CATGGTTTACCTTGTCTTGT+TGG | 0.323860 | 8_2:+8007166 | None:intergenic |
| GAAAGGCAGAAGTAGGAGAT+TGG | 0.371537 | 8_2:-8006303 | Msa1231720:CDS |
| TTGGCTCATTCATGTTTGAT+AGG | 0.382278 | 8_2:+8006806 | None:intergenic |
| AAATTATCTTTCTCCTTCAA+TGG | 0.395279 | 8_2:-8006278 | Msa1231720:CDS |
| ATAGGTTGGATTAAATTTGA+TGG | 0.396304 | 8_2:+8007057 | None:intergenic |
| ATAGGTTGATTTGAAAACTT+TGG | 0.404717 | 8_2:+8006824 | None:intergenic |
| GGTCACTTTAAGTTGTTGAT+AGG | 0.404842 | 8_2:+8006214 | None:intergenic |
| CTTTGAAAAGATGAAGGAAT+TGG | 0.406361 | 8_2:-8006380 | Msa1231720:CDS |
| GTAAATAAATCTGGATCTGT+TGG | 0.414990 | 8_2:-8006355 | Msa1231720:CDS |
| AAGTAATGGATGATCCTCTA+AGG | 0.416314 | 8_2:+8006909 | None:intergenic |
| GAACAAGTTCTTCTTTAGAA+AGG | 0.435606 | 8_2:-8006320 | Msa1231720:CDS |
| GAATTGGAGGTAAATAAATC+TGG | 0.436449 | 8_2:-8006364 | Msa1231720:CDS |
| TGTGATGGGATAAGTCCATT+TGG | 0.449863 | 8_2:-8006598 | Msa1231720:CDS |
| ATGTGGCTTTGAAAAGATGA+AGG | 0.468544 | 8_2:-8006386 | Msa1231720:CDS |
| AATTCATCCATGCTTAAAGT+TGG | 0.468739 | 8_2:+8006634 | None:intergenic |
| ATCTTTACCAACTTTAAGCA+TGG | 0.469779 | 8_2:-8006641 | Msa1231720:CDS |
| ATCATAGAAGAAAAGTTAAG+TGG | 0.477385 | 8_2:-8006238 | Msa1231720:CDS |
| GTTGCTAGCTTACCAAAATC+CGG | 0.477830 | 8_2:-8006988 | Msa1231720:CDS |
| ATCTCATGGGAGACCAATCA+AGG | 0.483852 | 8_2:-8007206 | Msa1231720:CDS |
| TGCTTTCAACCAAGTTGTGC+CGG | 0.488743 | 8_2:+8006969 | None:intergenic |
| GTGAGATTGCTTGAAGCCAT+TGG | 0.489192 | 8_2:+8007231 | None:intergenic |
| AAGCAATCTCACATATCTCA+TGG | 0.489911 | 8_2:-8007220 | Msa1231720:CDS |
| TTTGAAAAGAGTTTATAGGT+TGG | 0.496983 | 8_2:+8007043 | None:intergenic |
| GAAAACATAATCAATTTATG+TGG | 0.499434 | 8_2:-8006403 | Msa1231720:CDS |
| ATTGGACTCTTTAATTGACT+TGG | 0.500029 | 8_2:+8006747 | None:intergenic |
| TCATACGTTGGGTTACTTGA+AGG | 0.500169 | 8_2:-8006563 | Msa1231720:CDS |
| TGATCCCAAAATGAACCAAA+TGG | 0.505427 | 8_2:+8006583 | None:intergenic |
| GTAGACACAAAAGTGTCAAA+AGG | 0.506973 | 8_2:+8006697 | None:intergenic |
| TACCAAAATCCGGCACAACT+TGG | 0.510919 | 8_2:-8006978 | Msa1231720:CDS |
| TTCTTTAGAAAGGCAGAAGT+AGG | 0.511273 | 8_2:-8006310 | Msa1231720:CDS |
| TGAAAAGATGAAGGAATTGG+AGG | 0.515225 | 8_2:-8006377 | Msa1231720:CDS |
| TAAACATTGTATTCAAAGAA+AGG | 0.517657 | 8_2:+8006862 | None:intergenic |
| TGTGAATTGAATTTAAGTAA+TGG | 0.520270 | 8_2:+8006895 | None:intergenic |
| CTTCCTAGAATAAAAGGGTG+GGG | 0.534016 | 8_2:-8007120 | Msa1231720:CDS |
| TCTCACTTCCTAGAATAAAA+GGG | 0.537148 | 8_2:-8007125 | Msa1231720:CDS |
| TTCCTAGAATAAAAGGGTGG+GGG | 0.558654 | 8_2:-8007119 | Msa1231720:CDS |
| CACTTCCTAGAATAAAAGGG+TGG | 0.572694 | 8_2:-8007122 | Msa1231720:CDS |
| TTTGAATACAATGTTTATGG+TGG | 0.593264 | 8_2:-8006856 | Msa1231720:CDS |
| GGGTTACTTGAAGGAAAGCA+TGG | 0.598013 | 8_2:-8006554 | Msa1231720:CDS |
| AGAAGCAAGCCAACAAGACA+AGG | 0.609027 | 8_2:-8007175 | Msa1231720:CDS |
| ACTTCCTAGAATAAAAGGGT+GGG | 0.610406 | 8_2:-8007121 | Msa1231720:CDS |
| AGCAATCTCACATATCTCAT+GGG | 0.613596 | 8_2:-8007219 | Msa1231720:CDS |
| TCCTAGAATAAAAGGGTGGG+GGG | 0.616532 | 8_2:-8007118 | Msa1231720:CDS |
| GAAACGATGGCGATTAACAA+TGG | 0.622327 | 8_2:+8006936 | None:intergenic |
| GACTTGGCTAGTGAAAAGAA+TGG | 0.625045 | 8_2:+8006763 | None:intergenic |
| ATGGGAGACCAATCAAGGGA+TGG | 0.625439 | 8_2:-8007201 | Msa1231720:CDS |
| TATCAAACATGAATGAGCCA+AGG | 0.657848 | 8_2:-8006804 | Msa1231720:CDS |
| CCTCTAAGGAAGAGAAACGA+TGG | 0.665867 | 8_2:+8006923 | None:intergenic |
| TCTCATGGGAGACCAATCAA+GGG | 0.667102 | 8_2:-8007205 | Msa1231720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAAAAAAATAAAAATCTT+GGG | + | chr8_2:8006355-8006374 | None:intergenic | 10.0% |
| !! | TTGAAAAAAATAAAAATCTT+GGG | + | chr8_2:8006355-8006374 | None:intergenic | 10.0% |
| !! | CTTGAAAAAAATAAAAATCT+TGG | + | chr8_2:8006356-8006375 | None:intergenic | 15.0% |
| !!! | CAAGATTTTTATTTTTTTCA+AGG | - | chr8_2:8006354-8006373 | Msa1231720:CDS | 15.0% |
| !!! | TTTATTTTTTTCAAGGTTTT+TGG | - | chr8_2:8006361-8006380 | Msa1231720:CDS | 15.0% |
| !!! | AATAGAATTGCAAATTTTTT+GGG | - | chr8_2:8006978-8006997 | Msa1231720:CDS | 15.0% |
| !! | CTTGAAAAAAATAAAAATCT+TGG | + | chr8_2:8006356-8006375 | None:intergenic | 15.0% |
| !!! | CAAGATTTTTATTTTTTTCA+AGG | - | chr8_2:8006354-8006373 | Msa1231720:CDS | 15.0% |
| !!! | TTTATTTTTTTCAAGGTTTT+TGG | - | chr8_2:8006361-8006380 | Msa1231720:CDS | 15.0% |
| !!! | AATAGAATTGCAAATTTTTT+GGG | - | chr8_2:8006978-8006997 | Msa1231720:CDS | 15.0% |
| !!! | TGATTTTGAAAAGAGTTTAT+AGG | + | chr8_2:8006408-8006427 | None:intergenic | 20.0% |
| !! | TGTGAATTGAATTTAAGTAA+TGG | + | chr8_2:8006552-8006571 | None:intergenic | 20.0% |
| !! | TAAACATTGTATTCAAAGAA+AGG | + | chr8_2:8006585-8006604 | None:intergenic | 20.0% |
| !! | TTCTTTGAATACAATGTTTA+TGG | - | chr8_2:8006585-8006604 | Msa1231720:CDS | 20.0% |
| !!! | GGTTTTTTGCTAATAAAATA+AGG | - | chr8_2:8006772-8006791 | Msa1231720:CDS | 20.0% |
| !!! | TTTTTTGAAAGTTATTGTGA+TGG | - | chr8_2:8006831-8006850 | Msa1231720:CDS | 20.0% |
| !!! | TTTTTGAAAGTTATTGTGAT+GGG | - | chr8_2:8006832-8006851 | Msa1231720:CDS | 20.0% |
| !!! | CAATAGAATTGCAAATTTTT+TGG | - | chr8_2:8006977-8006996 | Msa1231720:CDS | 20.0% |
| !! | GAAAACATAATCAATTTATG+TGG | - | chr8_2:8007041-8007060 | Msa1231720:CDS | 20.0% |
| !!! | TAACTTTTCTTCTATGATTT+TGG | + | chr8_2:8007204-8007223 | None:intergenic | 20.0% |
| !!! | TGATTTTGAAAAGAGTTTAT+AGG | + | chr8_2:8006408-8006427 | None:intergenic | 20.0% |
| !! | TGTGAATTGAATTTAAGTAA+TGG | + | chr8_2:8006552-8006571 | None:intergenic | 20.0% |
| !! | TAAACATTGTATTCAAAGAA+AGG | + | chr8_2:8006585-8006604 | None:intergenic | 20.0% |
| !! | TTCTTTGAATACAATGTTTA+TGG | - | chr8_2:8006585-8006604 | Msa1231720:CDS | 20.0% |
| !!! | GGTTTTTTGCTAATAAAATA+AGG | - | chr8_2:8006772-8006791 | Msa1231720:CDS | 20.0% |
| !!! | TTTTTTGAAAGTTATTGTGA+TGG | - | chr8_2:8006831-8006850 | Msa1231720:CDS | 20.0% |
| !!! | TTTTTGAAAGTTATTGTGAT+GGG | - | chr8_2:8006832-8006851 | Msa1231720:CDS | 20.0% |
| !!! | CAATAGAATTGCAAATTTTT+TGG | - | chr8_2:8006977-8006996 | Msa1231720:CDS | 20.0% |
| !! | GAAAACATAATCAATTTATG+TGG | - | chr8_2:8007041-8007060 | Msa1231720:CDS | 20.0% |
| !!! | TAACTTTTCTTCTATGATTT+TGG | + | chr8_2:8007204-8007223 | None:intergenic | 20.0% |
| !! | ATAGGTTGGATTAAATTTGA+TGG | + | chr8_2:8006390-8006409 | None:intergenic | 25.0% |
| ! | TTTGAAAAGAGTTTATAGGT+TGG | + | chr8_2:8006404-8006423 | None:intergenic | 25.0% |
| ! | AACAACAATATCATTGTCTT+TGG | + | chr8_2:8006439-8006458 | None:intergenic | 25.0% |
| ! | TTTGAATACAATGTTTATGG+TGG | - | chr8_2:8006588-8006607 | Msa1231720:CDS | 25.0% |
| !!! | ATAGGTTGATTTGAAAACTT+TGG | + | chr8_2:8006623-8006642 | None:intergenic | 25.0% |
| ! | AAATTATCTTTCTCCTTCAA+TGG | - | chr8_2:8007166-8007185 | Msa1231720:CDS | 25.0% |
| ! | ATCATAGAAGAAAAGTTAAG+TGG | - | chr8_2:8007206-8007225 | Msa1231720:CDS | 25.0% |
| !! | ATAGGTTGGATTAAATTTGA+TGG | + | chr8_2:8006390-8006409 | None:intergenic | 25.0% |
| ! | TTTGAAAAGAGTTTATAGGT+TGG | + | chr8_2:8006404-8006423 | None:intergenic | 25.0% |
| ! | AACAACAATATCATTGTCTT+TGG | + | chr8_2:8006439-8006458 | None:intergenic | 25.0% |
| ! | TTTGAATACAATGTTTATGG+TGG | - | chr8_2:8006588-8006607 | Msa1231720:CDS | 25.0% |
| !!! | ATAGGTTGATTTGAAAACTT+TGG | + | chr8_2:8006623-8006642 | None:intergenic | 25.0% |
| ! | AAATTATCTTTCTCCTTCAA+TGG | - | chr8_2:8007166-8007185 | Msa1231720:CDS | 25.0% |
| ! | ATCATAGAAGAAAAGTTAAG+TGG | - | chr8_2:8007206-8007225 | Msa1231720:CDS | 25.0% |
| GGATTAACTGCTTAAATTCA+TGG | + | chr8_2:8006299-8006318 | None:intergenic | 30.0% | |
| TCTCACTTCCTAGAATAAAA+GGG | - | chr8_2:8006319-8006338 | Msa1231720:CDS | 30.0% | |
| ATTGGACTCTTTAATTGACT+TGG | + | chr8_2:8006700-8006719 | None:intergenic | 30.0% | |
| ATCTTTACCAACTTTAAGCA+TGG | - | chr8_2:8006803-8006822 | Msa1231720:CDS | 30.0% | |
| AATTCATCCATGCTTAAAGT+TGG | + | chr8_2:8006813-8006832 | None:intergenic | 30.0% | |
| !! | TAAGTCCATTTGGTTCATTT+TGG | - | chr8_2:8006856-8006875 | Msa1231720:CDS | 30.0% |
| !! | AAGTCCATTTGGTTCATTTT+GGG | - | chr8_2:8006857-8006876 | Msa1231720:CDS | 30.0% |
| ! | CTTTGAAAAGATGAAGGAAT+TGG | - | chr8_2:8007064-8007083 | Msa1231720:CDS | 30.0% |
| GAATTGGAGGTAAATAAATC+TGG | - | chr8_2:8007080-8007099 | Msa1231720:CDS | 30.0% | |
| GTAAATAAATCTGGATCTGT+TGG | - | chr8_2:8007089-8007108 | Msa1231720:CDS | 30.0% | |
| ! | GAACAAGTTCTTCTTTAGAA+AGG | - | chr8_2:8007124-8007143 | Msa1231720:CDS | 30.0% |
| ! | GATAGTTTTTCTTCCATTGA+AGG | + | chr8_2:8007182-8007201 | None:intergenic | 30.0% |
| GGATTAACTGCTTAAATTCA+TGG | + | chr8_2:8006299-8006318 | None:intergenic | 30.0% | |
| TCTCACTTCCTAGAATAAAA+GGG | - | chr8_2:8006319-8006338 | Msa1231720:CDS | 30.0% | |
| ATTGGACTCTTTAATTGACT+TGG | + | chr8_2:8006700-8006719 | None:intergenic | 30.0% | |
| ATCTTTACCAACTTTAAGCA+TGG | - | chr8_2:8006803-8006822 | Msa1231720:CDS | 30.0% | |
| AATTCATCCATGCTTAAAGT+TGG | + | chr8_2:8006813-8006832 | None:intergenic | 30.0% | |
| !! | TAAGTCCATTTGGTTCATTT+TGG | - | chr8_2:8006856-8006875 | Msa1231720:CDS | 30.0% |
| !! | AAGTCCATTTGGTTCATTTT+GGG | - | chr8_2:8006857-8006876 | Msa1231720:CDS | 30.0% |
| ! | CTTTGAAAAGATGAAGGAAT+TGG | - | chr8_2:8007064-8007083 | Msa1231720:CDS | 30.0% |
| GAATTGGAGGTAAATAAATC+TGG | - | chr8_2:8007080-8007099 | Msa1231720:CDS | 30.0% | |
| GTAAATAAATCTGGATCTGT+TGG | - | chr8_2:8007089-8007108 | Msa1231720:CDS | 30.0% | |
| ! | GAACAAGTTCTTCTTTAGAA+AGG | - | chr8_2:8007124-8007143 | Msa1231720:CDS | 30.0% |
| ! | GATAGTTTTTCTTCCATTGA+AGG | + | chr8_2:8007182-8007201 | None:intergenic | 30.0% |
| AAGCAATCTCACATATCTCA+TGG | - | chr8_2:8006224-8006243 | Msa1231720:CDS | 35.0% | |
| AGCAATCTCACATATCTCAT+GGG | - | chr8_2:8006225-8006244 | Msa1231720:CDS | 35.0% | |
| !! | CTTTTATTCTAGGAAGTGAG+AGG | + | chr8_2:8006320-8006339 | None:intergenic | 35.0% |
| CTCTCACTTCCTAGAATAAA+AGG | - | chr8_2:8006318-8006337 | Msa1231720:CDS | 35.0% | |
| ACTTCCTAGAATAAAAGGGT+GGG | - | chr8_2:8006323-8006342 | Msa1231720:CDS | 35.0% | |
| !! | AAGTAATGGATGATCCTCTA+AGG | + | chr8_2:8006538-8006557 | None:intergenic | 35.0% |
| TTGGCTCATTCATGTTTGAT+AGG | + | chr8_2:8006641-8006660 | None:intergenic | 35.0% | |
| TATCAAACATGAATGAGCCA+AGG | - | chr8_2:8006640-8006659 | Msa1231720:CDS | 35.0% | |
| !! | GTAGACACAAAAGTGTCAAA+AGG | + | chr8_2:8006750-8006769 | None:intergenic | 35.0% |
| ! | TTGACACTTTTGTGTCTACT+TGG | - | chr8_2:8006751-8006770 | Msa1231720:CDS | 35.0% |
| TGATCCCAAAATGAACCAAA+TGG | + | chr8_2:8006864-8006883 | None:intergenic | 35.0% | |
| !!! | TTCATTTTGGGATCATACGT+TGG | - | chr8_2:8006869-8006888 | Msa1231720:CDS | 35.0% |
| !!! | TCATTTTGGGATCATACGTT+GGG | - | chr8_2:8006870-8006889 | Msa1231720:CDS | 35.0% |
| ! | CTATCCTTTTACTAGAGAAG+AGG | - | chr8_2:8007001-8007020 | Msa1231720:CDS | 35.0% |
| !! | ATGTGGCTTTGAAAAGATGA+AGG | - | chr8_2:8007058-8007077 | Msa1231720:CDS | 35.0% |
| TGAAAAGATGAAGGAATTGG+AGG | - | chr8_2:8007067-8007086 | Msa1231720:CDS | 35.0% | |
| ! | TTCTTTAGAAAGGCAGAAGT+AGG | - | chr8_2:8007134-8007153 | Msa1231720:CDS | 35.0% |
| AAGCAATCTCACATATCTCA+TGG | - | chr8_2:8006224-8006243 | Msa1231720:CDS | 35.0% | |
| AGCAATCTCACATATCTCAT+GGG | - | chr8_2:8006225-8006244 | Msa1231720:CDS | 35.0% | |
| !! | CTTTTATTCTAGGAAGTGAG+AGG | + | chr8_2:8006320-8006339 | None:intergenic | 35.0% |
| CTCTCACTTCCTAGAATAAA+AGG | - | chr8_2:8006318-8006337 | Msa1231720:CDS | 35.0% | |
| ACTTCCTAGAATAAAAGGGT+GGG | - | chr8_2:8006323-8006342 | Msa1231720:CDS | 35.0% | |
| !! | AAGTAATGGATGATCCTCTA+AGG | + | chr8_2:8006538-8006557 | None:intergenic | 35.0% |
| TTGGCTCATTCATGTTTGAT+AGG | + | chr8_2:8006641-8006660 | None:intergenic | 35.0% | |
| TATCAAACATGAATGAGCCA+AGG | - | chr8_2:8006640-8006659 | Msa1231720:CDS | 35.0% | |
| !! | GTAGACACAAAAGTGTCAAA+AGG | + | chr8_2:8006750-8006769 | None:intergenic | 35.0% |
| ! | TTGACACTTTTGTGTCTACT+TGG | - | chr8_2:8006751-8006770 | Msa1231720:CDS | 35.0% |
| TGATCCCAAAATGAACCAAA+TGG | + | chr8_2:8006864-8006883 | None:intergenic | 35.0% | |
| !!! | TTCATTTTGGGATCATACGT+TGG | - | chr8_2:8006869-8006888 | Msa1231720:CDS | 35.0% |
| !!! | TCATTTTGGGATCATACGTT+GGG | - | chr8_2:8006870-8006889 | Msa1231720:CDS | 35.0% |
| ! | CTATCCTTTTACTAGAGAAG+AGG | - | chr8_2:8007001-8007020 | Msa1231720:CDS | 35.0% |
| !! | ATGTGGCTTTGAAAAGATGA+AGG | - | chr8_2:8007058-8007077 | Msa1231720:CDS | 35.0% |
| TGAAAAGATGAAGGAATTGG+AGG | - | chr8_2:8007067-8007086 | Msa1231720:CDS | 35.0% | |
| ! | TTCTTTAGAAAGGCAGAAGT+AGG | - | chr8_2:8007134-8007153 | Msa1231720:CDS | 35.0% |
| CATGGTTTACCTTGTCTTGT+TGG | + | chr8_2:8006281-8006300 | None:intergenic | 40.0% | |
| CACTTCCTAGAATAAAAGGG+TGG | - | chr8_2:8006322-8006341 | Msa1231720:CDS | 40.0% | |
| CTTCCTAGAATAAAAGGGTG+GGG | - | chr8_2:8006324-8006343 | Msa1231720:CDS | 40.0% | |
| TTCCTAGAATAAAAGGGTGG+GGG | - | chr8_2:8006325-8006344 | Msa1231720:CDS | 40.0% | |
| ! | GTTGCTAGCTTACCAAAATC+CGG | - | chr8_2:8006456-8006475 | Msa1231720:CDS | 40.0% |
| GAAACGATGGCGATTAACAA+TGG | + | chr8_2:8006511-8006530 | None:intergenic | 40.0% | |
| ! | ATGAATGAGCCAAGGCTTTT+TGG | - | chr8_2:8006648-8006667 | Msa1231720:CDS | 40.0% |
| ! | TGAATGAGCCAAGGCTTTTT+GGG | - | chr8_2:8006649-8006668 | Msa1231720:CDS | 40.0% |
| GACTTGGCTAGTGAAAAGAA+TGG | + | chr8_2:8006684-8006703 | None:intergenic | 40.0% | |
| ! | TGTGATGGGATAAGTCCATT+TGG | - | chr8_2:8006846-8006865 | Msa1231720:CDS | 40.0% |
| TCATACGTTGGGTTACTTGA+AGG | - | chr8_2:8006881-8006900 | Msa1231720:CDS | 40.0% | |
| CTCTCCTCTTCTCTAGTAAA+AGG | + | chr8_2:8007008-8007027 | None:intergenic | 40.0% | |
| CATGGTTTACCTTGTCTTGT+TGG | + | chr8_2:8006281-8006300 | None:intergenic | 40.0% | |
| CACTTCCTAGAATAAAAGGG+TGG | - | chr8_2:8006322-8006341 | Msa1231720:CDS | 40.0% | |
| CTTCCTAGAATAAAAGGGTG+GGG | - | chr8_2:8006324-8006343 | Msa1231720:CDS | 40.0% | |
| TTCCTAGAATAAAAGGGTGG+GGG | - | chr8_2:8006325-8006344 | Msa1231720:CDS | 40.0% | |
| ! | GTTGCTAGCTTACCAAAATC+CGG | - | chr8_2:8006456-8006475 | Msa1231720:CDS | 40.0% |
| GAAACGATGGCGATTAACAA+TGG | + | chr8_2:8006511-8006530 | None:intergenic | 40.0% | |
| ! | ATGAATGAGCCAAGGCTTTT+TGG | - | chr8_2:8006648-8006667 | Msa1231720:CDS | 40.0% |
| ! | TGAATGAGCCAAGGCTTTTT+GGG | - | chr8_2:8006649-8006668 | Msa1231720:CDS | 40.0% |
| GACTTGGCTAGTGAAAAGAA+TGG | + | chr8_2:8006684-8006703 | None:intergenic | 40.0% | |
| ! | TGTGATGGGATAAGTCCATT+TGG | - | chr8_2:8006846-8006865 | Msa1231720:CDS | 40.0% |
| TCATACGTTGGGTTACTTGA+AGG | - | chr8_2:8006881-8006900 | Msa1231720:CDS | 40.0% | |
| CTCTCCTCTTCTCTAGTAAA+AGG | + | chr8_2:8007008-8007027 | None:intergenic | 40.0% | |
| ATCTCATGGGAGACCAATCA+AGG | - | chr8_2:8006238-8006257 | Msa1231720:CDS | 45.0% | |
| TCTCATGGGAGACCAATCAA+GGG | - | chr8_2:8006239-8006258 | Msa1231720:CDS | 45.0% | |
| CTTCTTGTCCATCCCTTGAT+TGG | + | chr8_2:8006254-8006273 | None:intergenic | 45.0% | |
| AGAAGCAAGCCAACAAGACA+AGG | - | chr8_2:8006269-8006288 | Msa1231720:CDS | 45.0% | |
| TCCTAGAATAAAAGGGTGGG+GGG | - | chr8_2:8006326-8006345 | Msa1231720:CDS | 45.0% | |
| TACCAAAATCCGGCACAACT+TGG | - | chr8_2:8006466-8006485 | Msa1231720:CDS | 45.0% | |
| ! | AACCAAGTTGTGCCGGATTT+TGG | + | chr8_2:8006471-8006490 | None:intergenic | 45.0% |
| TGCTTTCAACCAAGTTGTGC+CGG | + | chr8_2:8006478-8006497 | None:intergenic | 45.0% | |
| ! | CCTCTAAGGAAGAGAAACGA+TGG | + | chr8_2:8006524-8006543 | None:intergenic | 45.0% |
| CCATCGTTTCTCTTCCTTAG+AGG | - | chr8_2:8006521-8006540 | Msa1231720:CDS | 45.0% | |
| ACATGAGTCCCAAAAAGCCT+TGG | + | chr8_2:8006660-8006679 | None:intergenic | 45.0% | |
| GGGTTACTTGAAGGAAAGCA+TGG | - | chr8_2:8006890-8006909 | Msa1231720:CDS | 45.0% | |
| GAAAGGCAGAAGTAGGAGAT+TGG | - | chr8_2:8007141-8007160 | Msa1231720:CDS | 45.0% | |
| ATCTCATGGGAGACCAATCA+AGG | - | chr8_2:8006238-8006257 | Msa1231720:CDS | 45.0% | |
| TCTCATGGGAGACCAATCAA+GGG | - | chr8_2:8006239-8006258 | Msa1231720:CDS | 45.0% | |
| CTTCTTGTCCATCCCTTGAT+TGG | + | chr8_2:8006254-8006273 | None:intergenic | 45.0% | |
| AGAAGCAAGCCAACAAGACA+AGG | - | chr8_2:8006269-8006288 | Msa1231720:CDS | 45.0% | |
| TCCTAGAATAAAAGGGTGGG+GGG | - | chr8_2:8006326-8006345 | Msa1231720:CDS | 45.0% | |
| TACCAAAATCCGGCACAACT+TGG | - | chr8_2:8006466-8006485 | Msa1231720:CDS | 45.0% | |
| ! | AACCAAGTTGTGCCGGATTT+TGG | + | chr8_2:8006471-8006490 | None:intergenic | 45.0% |
| TGCTTTCAACCAAGTTGTGC+CGG | + | chr8_2:8006478-8006497 | None:intergenic | 45.0% | |
| ! | CCTCTAAGGAAGAGAAACGA+TGG | + | chr8_2:8006524-8006543 | None:intergenic | 45.0% |
| CCATCGTTTCTCTTCCTTAG+AGG | - | chr8_2:8006521-8006540 | Msa1231720:CDS | 45.0% | |
| ACATGAGTCCCAAAAAGCCT+TGG | + | chr8_2:8006660-8006679 | None:intergenic | 45.0% | |
| GGGTTACTTGAAGGAAAGCA+TGG | - | chr8_2:8006890-8006909 | Msa1231720:CDS | 45.0% | |
| GAAAGGCAGAAGTAGGAGAT+TGG | - | chr8_2:8007141-8007160 | Msa1231720:CDS | 45.0% | |
| !!! | TATATAAATTATTTTACAAT+TGG | + | chr8_2:8006718-8006737 | None:intergenic | 5.0% |
| !!! | TATATAAATTATTTTACAAT+TGG | + | chr8_2:8006718-8006737 | None:intergenic | 5.0% |
| ATGGGAGACCAATCAAGGGA+TGG | - | chr8_2:8006243-8006262 | Msa1231720:CDS | 50.0% | |
| ATGGGAGACCAATCAAGGGA+TGG | - | chr8_2:8006243-8006262 | Msa1231720:CDS | 50.0% | |
| ! | GCCCCCCACCCTTTTATTCT+AGG | + | chr8_2:8006330-8006349 | None:intergenic | 55.0% |
| ! | GCCCCCCACCCTTTTATTCT+AGG | + | chr8_2:8006330-8006349 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 8006216 | 8007250 | 8006216 | ID=Msa1231720;Name=Msa1231720 |
| chr8_2 | mRNA | 8006216 | 8007250 | 8006216 | ID=Msa1231720-mRNA-1;Parent=Msa1231720;Name=Msa1231720-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|-1|0|1|-1|1|1|0|344 |
| chr8_2 | exon | 8006216 | 8007250 | 8006216 | ID=Msa1231720-mRNA-1:exon:3064;Parent=Msa1231720-mRNA-1 |
| chr8_2 | CDS | 8006216 | 8007250 | 8006216 | ID=Msa1231720-mRNA-1:cds;Parent=Msa1231720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
