Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205910 | KEH16287.1 | 52.147 | 326 | 102 | 10 | 1 | 277 | 1 | 321 | 1.50e-85 | 269 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205910 | sp|Q1PF16|BH019_ARATH | 36.913 | 149 | 83 | 4 | 133 | 272 | 149 | 295 | 1.14e-21 | 95.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0062010 | Msa1205910 | 0.801165 | 1.023939e-48 | -8.615850e-47 |
| Msa0096590 | Msa1205910 | 0.814119 | 1.811772e-51 | -8.615850e-47 |
| Msa0643190 | Msa1205910 | 0.806666 | 7.363164e-50 | -8.615850e-47 |
| Msa0667600 | Msa1205910 | 0.808165 | 3.540345e-50 | -8.615850e-47 |
| Msa0768670 | Msa1205910 | 0.808743 | 2.665857e-50 | -8.615850e-47 |
| Msa0768720 | Msa1205910 | 0.808144 | 3.578312e-50 | -8.615850e-47 |
| Msa0777070 | Msa1205910 | 0.819623 | 1.053810e-52 | -8.615850e-47 |
| Msa0806930 | Msa1205910 | 0.802869 | 4.570528e-49 | -8.615850e-47 |
| Msa0814160 | Msa1205910 | 0.807328 | 5.334202e-50 | -8.615850e-47 |
| Msa0150910 | Msa1205910 | 0.804542 | 2.054800e-49 | -8.615850e-47 |
| Msa0163340 | Msa1205910 | 0.805158 | 1.527848e-49 | -8.615850e-47 |
| Msa0190670 | Msa1205910 | 0.814654 | 1.379857e-51 | -8.615850e-47 |
| Msa0209060 | Msa1205910 | 0.843859 | 1.080993e-58 | -8.615850e-47 |
| Msa0380680 | Msa1205910 | 0.804070 | 2.576575e-49 | -8.615850e-47 |
| Msa0987640 | Msa1205910 | 0.836772 | 7.691459e-57 | -8.615850e-47 |
| Msa0993450 | Msa1205910 | 0.805184 | 1.508947e-49 | -8.615850e-47 |
| Msa1018590 | Msa1205910 | 0.814771 | 1.300042e-51 | -8.615850e-47 |
| Msa1021620 | Msa1205910 | 0.835657 | 1.476915e-56 | -8.615850e-47 |
| Msa1024350 | Msa1205910 | 0.811274 | 7.599739e-51 | -8.615850e-47 |
| Msa1068080 | Msa1205910 | 0.815381 | 9.516378e-52 | -8.615850e-47 |
| Msa1069010 | Msa1205910 | 0.829622 | 4.643750e-55 | -8.615850e-47 |
| Msa0261400 | Msa1205910 | 0.812106 | 5.010147e-51 | -8.615850e-47 |
| Msa0288540 | Msa1205910 | 0.842921 | 1.924062e-58 | -8.615850e-47 |
| Msa0299030 | Msa1205910 | 0.801531 | 8.617029e-49 | -8.615850e-47 |
| Msa0326770 | Msa1205910 | 0.860510 | 1.964140e-63 | -8.615850e-47 |
| Msa0354670 | Msa1205910 | 0.814267 | 1.680693e-51 | -8.615850e-47 |
| Msa1125190 | Msa1205910 | 0.800112 | 1.679437e-48 | -8.615850e-47 |
| Msa1148210 | Msa1205910 | 0.837991 | 3.747709e-57 | -8.615850e-47 |
| Msa1149020 | Msa1205910 | 0.807513 | 4.872684e-50 | -8.615850e-47 |
| Msa1152180 | Msa1205910 | 0.825788 | 3.873055e-54 | -8.615850e-47 |
| Msa1156240 | Msa1205910 | 0.807120 | 5.902108e-50 | -8.615850e-47 |
| Msa1205910 | Msa1297390 | 0.959627 | 1.192183e-117 | -8.615850e-47 |
| Msa1205910 | Msa1323120 | 0.801390 | 9.209516e-49 | -8.615850e-47 |
| Msa1205910 | Msa1329740 | 0.801153 | 1.029738e-48 | -8.615850e-47 |
| Msa1205910 | Msa1335100 | 0.804517 | 2.080131e-49 | -8.615850e-47 |
| Msa1205910 | Msa1357860 | 0.802187 | 6.318532e-49 | -8.615850e-47 |
| Msa1205910 | Msa1365450 | 0.807870 | 4.092159e-50 | -8.615850e-47 |
| Msa1205910 | Msa1368490 | 0.821112 | 4.800417e-53 | -8.615850e-47 |
| Msa1205910 | Msa1406840 | 0.836309 | 1.009027e-56 | -8.615850e-47 |
| Msa1205910 | Msa1431160 | 0.825190 | 5.365191e-54 | -8.615850e-47 |
| Msa1205910 | Msa1445890 | 0.820495 | 6.654804e-53 | -8.615850e-47 |
| Msa1205910 | Msa1445900 | 0.807730 | 4.382937e-50 | -8.615850e-47 |
| Msa1205910 | Msa1459610 | 0.817363 | 3.427718e-52 | -8.615850e-47 |
| Msa0539620 | Msa1205910 | 0.803910 | 2.781468e-49 | -8.615850e-47 |
| Msa0539630 | Msa1205910 | 0.808218 | 3.449727e-50 | -8.615850e-47 |
| Msa0580100 | Msa1205910 | 0.816418 | 5.587875e-52 | -8.615850e-47 |
| Msa0591490 | Msa1205910 | 0.819356 | 1.212590e-52 | -8.615850e-47 |
| Msa0602050 | Msa1205910 | 0.819364 | 1.207678e-52 | -8.615850e-47 |
| Msa0896920 | Msa1205910 | 0.801402 | 9.157966e-49 | -8.615850e-47 |
| Msa0896950 | Msa1205910 | 0.808014 | 3.813323e-50 | -8.615850e-47 |
| Msa0913550 | Msa1205910 | 0.865489 | 5.689759e-65 | -8.615850e-47 |
| Msa0921180 | Msa1205910 | 0.811511 | 6.748722e-51 | -8.615850e-47 |
| Msa0946010 | Msa1205910 | 0.845508 | 3.886562e-59 | -8.615850e-47 |
| Msa0951150 | Msa1205910 | 0.863643 | 2.149567e-64 | -8.615850e-47 |
| Msa0959700 | Msa1205910 | 0.817815 | 2.711737e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205910 | MtrunA17_Chr4g0054621 | 52.147 | 326 | 102 | 10 | 1 | 277 | 22 | 342 | 2.58e-89 | 269 |
| Msa1205910 | MtrunA17_Chr2g0307131 | 40.816 | 343 | 124 | 11 | 3 | 276 | 23 | 355 | 1.47e-62 | 201 |
| Msa1205910 | MtrunA17_Chr6g0468491 | 41.796 | 323 | 131 | 12 | 3 | 277 | 1 | 314 | 1.45e-61 | 197 |
| Msa1205910 | MtrunA17_Chr4g0033391 | 41.479 | 311 | 135 | 7 | 3 | 278 | 24 | 322 | 2.61e-58 | 189 |
| Msa1205910 | MtrunA17_Chr2g0307141 | 40.462 | 346 | 127 | 10 | 3 | 277 | 23 | 360 | 1.86e-55 | 182 |
| Msa1205910 | MtrunA17_Chr4g0054581 | 39.889 | 361 | 126 | 14 | 3 | 277 | 24 | 379 | 2.12e-54 | 180 |
| Msa1205910 | MtrunA17_Chr4g0033291 | 40.606 | 330 | 117 | 10 | 3 | 277 | 24 | 329 | 3.95e-53 | 176 |
| Msa1205910 | MtrunA17_Chr4g0033281 | 38.820 | 322 | 130 | 8 | 3 | 276 | 23 | 325 | 8.38e-49 | 164 |
| Msa1205910 | MtrunA17_Chr5g0400621 | 36.688 | 308 | 149 | 8 | 5 | 276 | 36 | 333 | 4.29e-38 | 136 |
| Msa1205910 | MtrunA17_Chr6g0468461 | 37.829 | 304 | 120 | 14 | 3 | 252 | 23 | 311 | 3.52e-37 | 134 |
| Msa1205910 | MtrunA17_Chr7g0225901 | 40.183 | 219 | 94 | 7 | 62 | 252 | 31 | 240 | 4.34e-36 | 129 |
| Msa1205910 | MtrunA17_Chr5g0400641 | 51.145 | 131 | 59 | 2 | 132 | 258 | 27 | 156 | 2.35e-34 | 122 |
| Msa1205910 | MtrunA17_Chr4g0002801 | 31.102 | 254 | 116 | 6 | 67 | 273 | 90 | 331 | 1.34e-23 | 97.8 |
| Msa1205910 | MtrunA17_Chr5g0400661 | 36.250 | 160 | 80 | 3 | 132 | 272 | 178 | 334 | 1.39e-23 | 97.8 |
| Msa1205910 | MtrunA17_Chr2g0280161 | 37.162 | 148 | 89 | 2 | 132 | 275 | 206 | 353 | 1.65e-23 | 98.2 |
| Msa1205910 | MtrunA17_Chr4g0054561 | 36.496 | 137 | 86 | 1 | 132 | 267 | 184 | 320 | 1.56e-20 | 89.4 |
| Msa1205910 | MtrunA17_Chr2g0333641 | 36.691 | 139 | 83 | 3 | 132 | 267 | 166 | 302 | 3.07e-20 | 88.6 |
| Msa1205910 | MtrunA17_Chr4g0049331 | 33.136 | 169 | 107 | 2 | 113 | 275 | 142 | 310 | 5.02e-20 | 87.8 |
| Msa1205910 | MtrunA17_Chr4g0002781 | 35.570 | 149 | 88 | 2 | 132 | 273 | 203 | 350 | 5.31e-20 | 88.2 |
| Msa1205910 | MtrunA17_Chr7g0233441 | 37.063 | 143 | 75 | 3 | 132 | 270 | 63 | 194 | 5.67e-20 | 85.5 |
| Msa1205910 | MtrunA17_Chr4g0002831 | 35.915 | 142 | 76 | 3 | 133 | 270 | 72 | 202 | 1.14e-19 | 84.7 |
| Msa1205910 | MtrunA17_Chr4g0054551 | 34.307 | 137 | 89 | 1 | 132 | 267 | 184 | 320 | 1.21e-19 | 87.0 |
| Msa1205910 | MtrunA17_Chr4g0002851 | 37.410 | 139 | 72 | 3 | 132 | 270 | 71 | 194 | 9.08e-19 | 82.0 |
| Msa1205910 | MtrunA17_Chr2g0333621 | 33.553 | 152 | 91 | 3 | 132 | 276 | 167 | 315 | 1.06e-18 | 84.3 |
| Msa1205910 | MtrunA17_Chr5g0400671 | 30.496 | 141 | 98 | 0 | 132 | 272 | 183 | 323 | 3.02e-18 | 83.2 |
| Msa1205910 | MtrunA17_Chr2g0333611 | 28.251 | 223 | 117 | 6 | 83 | 274 | 7 | 217 | 6.32e-18 | 80.5 |
| Msa1205910 | MtrunA17_Chr4g0054571 | 34.615 | 156 | 86 | 2 | 132 | 274 | 179 | 331 | 1.36e-17 | 81.3 |
| Msa1205910 | MtrunA17_Chr8g0336681 | 27.391 | 230 | 125 | 5 | 81 | 268 | 102 | 331 | 1.80e-16 | 78.2 |
| Msa1205910 | MtrunA17_Chr2g0333541 | 43.820 | 89 | 49 | 1 | 190 | 278 | 187 | 274 | 5.13e-15 | 73.2 |
| Msa1205910 | MtrunA17_Chr7g0249811 | 29.577 | 142 | 94 | 1 | 132 | 273 | 194 | 329 | 6.03e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205910 | AT2G22760.1 | 36.913 | 149 | 83 | 4 | 133 | 272 | 149 | 295 | 1.16e-22 | 95.1 |
| Msa1205910 | AT4G37850.2 | 34.000 | 150 | 91 | 3 | 132 | 275 | 181 | 328 | 5.34e-18 | 82.8 |
| Msa1205910 | AT4G37850.1 | 34.000 | 150 | 91 | 3 | 132 | 275 | 181 | 328 | 5.34e-18 | 82.8 |
| Msa1205910 | AT2G22760.2 | 33.129 | 163 | 97 | 4 | 100 | 252 | 114 | 274 | 1.46e-17 | 80.9 |
| Msa1205910 | AT2G22770.1 | 29.487 | 156 | 92 | 3 | 133 | 270 | 162 | 317 | 4.18e-16 | 77.4 |
| Msa1205910 | AT2G22750.3 | 31.579 | 152 | 93 | 3 | 132 | 274 | 183 | 332 | 1.29e-11 | 64.3 |
| Msa1205910 | AT2G22750.5 | 30.675 | 163 | 102 | 3 | 121 | 274 | 168 | 328 | 1.39e-11 | 64.3 |
| Msa1205910 | AT2G22750.2 | 31.579 | 152 | 93 | 3 | 132 | 274 | 155 | 304 | 1.53e-11 | 63.9 |
Find 46 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAAATCCATTATGATTT+TGG | 0.102337 | 8_1:-62574046 | None:intergenic |
| ACGCTGATAACCCATAAAAT+TGG | 0.197823 | 8_1:-62570894 | None:intergenic |
| ATGCTGCCATGCGTAGGTTT+TGG | 0.256145 | 8_1:-62574287 | None:intergenic |
| GATGGACAAGACTTCAATAT+TGG | 0.295753 | 8_1:+62573809 | Msa1205910:intron |
| CCATAAAATTGGGTTGGGTT+TGG | 0.308294 | 8_1:-62570883 | None:intergenic |
| CAAAGAATTTAAAGAGCGTT+TGG | 0.344136 | 8_1:+62573851 | Msa1205910:CDS |
| TGTCGTCAATAACAATGTTA+TGG | 0.377578 | 8_1:+62574106 | Msa1205910:CDS |
| ATCCAATGCCAAAATCATAA+TGG | 0.388524 | 8_1:+62574038 | Msa1205910:CDS |
| ATAACAATGTTATGGCCCTT+GGG | 0.410525 | 8_1:+62574114 | Msa1205910:CDS |
| CGCTGATAACCCATAAAATT+GGG | 0.416638 | 8_1:-62570893 | None:intergenic |
| GGTCTGTGTCTGTTCCTCTA+AGG | 0.419045 | 8_1:-62570698 | None:intergenic |
| ATAACCCATAAAATTGGGTT+GGG | 0.425291 | 8_1:-62570888 | None:intergenic |
| AGGCTACAACTTGACCATAA+AGG | 0.431305 | 8_1:+62574257 | Msa1205910:CDS |
| AATAACAATGTTATGGCCCT+TGG | 0.435181 | 8_1:+62574113 | Msa1205910:CDS |
| TCAGCGTCATTGCCAGAGTT+AGG | 0.436685 | 8_1:+62570910 | Msa1205910:CDS |
| AAATTTGTGTTTCCTAACTC+TGG | 0.446748 | 8_1:-62570922 | None:intergenic |
| TACTCTTAGCAAGGAAGAAA+CGG | 0.451484 | 8_1:+62570756 | Msa1205910:CDS |
| CTGGAAAACATATCTTGATT+CGG | 0.463404 | 8_1:+62574015 | Msa1205910:CDS |
| AACGTGGAAGCAAAAGTGTC+TGG | 0.469222 | 8_1:+62573996 | Msa1205910:CDS |
| ATCCTTTACCTCAGCAATGA+TGG | 0.474722 | 8_1:-62574156 | None:intergenic |
| TCAGTTTCACAACAGAGGTC+TGG | 0.484300 | 8_1:-62573936 | None:intergenic |
| TATTAATTTGCAGGAAATGG+TGG | 0.500169 | 8_1:+62570612 | None:intergenic |
| GATAACCCATAAAATTGGGT+TGG | 0.506362 | 8_1:-62570889 | None:intergenic |
| TTCTTCCTTGCTAAGAGTAG+AGG | 0.512428 | 8_1:-62570752 | None:intergenic |
| GTCAAAAGACATAATTTGAA+AGG | 0.514398 | 8_1:-62570857 | None:intergenic |
| TTCCACGTTGATGAGTGATT+CGG | 0.527891 | 8_1:-62573982 | None:intergenic |
| CACTTTCAGTTTCACAACAG+AGG | 0.563363 | 8_1:-62573941 | None:intergenic |
| CATTTCCTCTACTCTTAGCA+AGG | 0.565542 | 8_1:+62570747 | Msa1205910:CDS |
| TAACAATGTTATGGCCCTTG+GGG | 0.572849 | 8_1:+62574115 | Msa1205910:CDS |
| CACGTTGATGAGTGATTCGG+TGG | 0.575405 | 8_1:-62573979 | None:intergenic |
| ATTATTGTATAGATTGGCGA+AGG | 0.585734 | 8_1:+62574237 | Msa1205910:intron |
| CTGAGTCAAACATTGTTGCA+TGG | 0.587333 | 8_1:-62570719 | None:intergenic |
| AGAAGAGGGGAAGAAATCAA+AGG | 0.590831 | 8_1:+62573884 | Msa1205910:CDS |
| CACAATCTGTGTCATGTGAA+AGG | 0.591624 | 8_1:-62570669 | None:intergenic |
| ACTTCAATGCTGCCATGCGT+AGG | 0.592406 | 8_1:-62574293 | None:intergenic |
| AAAAGACATAATTTGAAAGG+AGG | 0.613846 | 8_1:-62570854 | None:intergenic |
| CATGCAACAATGTTTGACTC+AGG | 0.621521 | 8_1:+62570720 | Msa1205910:CDS |
| ATCAAAGGAAGATCAGTCGA+TGG | 0.644964 | 8_1:+62573899 | Msa1205910:CDS |
| TGTCGACGATAGAATCCCCA+AGG | 0.650856 | 8_1:-62574130 | None:intergenic |
| CGACATTACCATCATTGCTG+AGG | 0.653958 | 8_1:+62574148 | Msa1205910:CDS |
| AAAGGAAGATCAGTCGATGG+TGG | 0.662321 | 8_1:+62573902 | Msa1205910:CDS |
| ACTCGTCCAAAACCTACGCA+TGG | 0.666381 | 8_1:+62574281 | Msa1205910:CDS |
| ATACAACTTATTTGACGAGG+AGG | 0.673794 | 8_1:+62570639 | Msa1205910:CDS |
| TGAATACAACTTATTTGACG+AGG | 0.701979 | 8_1:+62570636 | Msa1205910:CDS |
| GTCGACGATAGAATCCCCAA+GGG | 0.728713 | 8_1:-62574129 | None:intergenic |
| CACCGAATCACTCATCAACG+TGG | 0.739553 | 8_1:+62573980 | Msa1205910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGAATTTTCAATTATTTATT+GGG | - | chr8_1:62571510-62571529 | None:intergenic | 10.0% |
| !!! | TTGAATTTTCAATTATTTAT+TGG | - | chr8_1:62571511-62571530 | None:intergenic | 10.0% |
| !!! | TTGTTAGTTATTTTATTATA+TGG | - | chr8_1:62571718-62571737 | None:intergenic | 10.0% |
| !!! | GTTATTATTTTTTTTATAGA+GGG | - | chr8_1:62572105-62572124 | None:intergenic | 10.0% |
| !!! | TGTTATTATTTTTTTTATAG+AGG | - | chr8_1:62572106-62572125 | None:intergenic | 10.0% |
| !!! | AACTTTTCACAAAAATATTA+TGG | + | chr8_1:62570817-62570836 | Msa1205910:CDS | 15.0% |
| !!! | CTTTTTATTCTTTTTTTTAG+AGG | - | chr8_1:62571555-62571574 | None:intergenic | 15.0% |
| !! | TTACAAAGAAAACTATATAT+TGG | - | chr8_1:62571934-62571953 | None:intergenic | 15.0% |
| !!! | TAGTTTTCTTTGTAAAAATA+TGG | + | chr8_1:62571939-62571958 | Msa1205910:intron | 15.0% |
| !!! | ATACAAAAGTGTATATAATA+CGG | - | chr8_1:62572023-62572042 | None:intergenic | 15.0% |
| !!! | ATTAGGATTAATTATAGTTT+TGG | + | chr8_1:62572220-62572239 | Msa1205910:intron | 15.0% |
| !! | AAGTTACATGATTATATTAA+AGG | + | chr8_1:62572514-62572533 | Msa1205910:intron | 15.0% |
| !!! | ACATTTAAAGTTAAAGTTAA+CGG | - | chr8_1:62572656-62572675 | None:intergenic | 15.0% |
| !! | TTAAAAATTAATAGGATCTA+TGG | - | chr8_1:62572709-62572728 | None:intergenic | 15.0% |
| !!! | TTTTTTTGAAGATCTTTTTG+AGG | - | chr8_1:62570959-62570978 | None:intergenic | 20.0% |
| !! | ATAGTTGTACAAATATCTAA+GGG | - | chr8_1:62571830-62571849 | None:intergenic | 20.0% |
| !! | AATAGTTGTACAAATATCTA+AGG | - | chr8_1:62571831-62571850 | None:intergenic | 20.0% |
| !! | AGAAAGGTAAAAATATAATG+CGG | - | chr8_1:62571889-62571908 | None:intergenic | 20.0% |
| !! | CCTAATAAATAAAGTGATAT+GGG | - | chr8_1:62572206-62572225 | None:intergenic | 20.0% |
| !! | TCCTAATAAATAAAGTGATA+TGG | - | chr8_1:62572207-62572226 | None:intergenic | 20.0% |
| !!! | GATTCGTTATTGTTTTTTAT+AGG | + | chr8_1:62572402-62572421 | Msa1205910:intron | 20.0% |
| !! | ATGAAAACAACAAATTAGTT+AGG | - | chr8_1:62573706-62573725 | None:intergenic | 20.0% |
| !!! | TCGTTGATTTTAAAACTTAT+GGG | - | chr8_1:62573677-62573696 | None:intergenic | 20.0% |
| !!! | ATCGTTGATTTTAAAACTTA+TGG | - | chr8_1:62573676-62573695 | None:intergenic | 20.0% |
| !!! | AAGTTTTAAAATCAACGATT+TGG | + | chr8_1:62572591-62572610 | Msa1205910:intron | 20.0% |
| !! | TTAACTTTAAATGTCTAAAG+TGG | + | chr8_1:62572662-62572681 | Msa1205910:intron | 20.0% |
| !!! | TTTTTTTAAACAATGACCAT+TGG | + | chr8_1:62572749-62572768 | Msa1205910:intron | 20.0% |
| !! | AAAAGTGAAAAAATTAGAAG+TGG | - | chr8_1:62572948-62572967 | None:intergenic | 20.0% |
| !! | TATACTGTCAAAAAAAAAAG+AGG | + | chr8_1:62573116-62573135 | Msa1205910:intron | 20.0% |
| !! | AAATCTCAAAAACAAAATCT+AGG | + | chr8_1:62573160-62573179 | Msa1205910:intron | 20.0% |
| !! | AAAACTGAAGTAAAAATTGA+GGG | + | chr8_1:62573648-62573667 | Msa1205910:intron | 20.0% |
| !!! | AAGTTTTAAAATCAACGATT+TGG | - | chr8_1:62572591-62572610 | None:intergenic | 20.0% |
| !!! | ATCGTTGATTTTAAAACTTA+TGG | + | chr8_1:62573676-62573695 | Msa1205910:intron | 20.0% |
| !!! | TCGTTGATTTTAAAACTTAT+GGG | + | chr8_1:62573677-62573696 | Msa1205910:intron | 20.0% |
| !!! | CTAATTTGTTGTTTTCATTT+TGG | - | chr8_1:62572562-62572581 | None:intergenic | 20.0% |
| !! | ATGAAAACAACAAATTAGTT+AGG | + | chr8_1:62573706-62573725 | Msa1205910:intron | 20.0% |
| !! | TGAAAACAACAAATTAGTTA+GGG | + | chr8_1:62573707-62573726 | Msa1205910:intron | 20.0% |
| !!! | CTAATAAACAGATTTTACAT+CGG | - | chr8_1:62573790-62573809 | None:intergenic | 20.0% |
| !! | TGTAAAATCTGTTTATTAGA+TGG | + | chr8_1:62573791-62573810 | Msa1205910:intron | 20.0% |
| !!! | TTCTTTTTACTTCAATGAAA+AGG | + | chr8_1:62574180-62574199 | Msa1205910:intron | 20.0% |
| ! | AAAAGACATAATTTGAAAGG+AGG | - | chr8_1:62570857-62570876 | None:intergenic | 25.0% |
| ! | GTCAAAAGACATAATTTGAA+AGG | - | chr8_1:62570860-62570879 | None:intergenic | 25.0% |
| ! | CAAAAAAATCAAAAGCAAAG+AGG | + | chr8_1:62570971-62570990 | Msa1205910:CDS | 25.0% |
| !! | TGTATTGACCTAATCAAAAT+TGG | - | chr8_1:62572174-62572193 | None:intergenic | 25.0% |
| !! | CCCATATCACTTTATTTATT+AGG | + | chr8_1:62572203-62572222 | Msa1205910:intron | 25.0% |
| !! | TCTGACTTTCTATTTTCATA+GGG | - | chr8_1:62572279-62572298 | None:intergenic | 25.0% |
| !! | ATCTGACTTTCTATTTTCAT+AGG | - | chr8_1:62572280-62572299 | None:intergenic | 25.0% |
| ! | TAAAGGCTTAATTCGATATT+TGG | + | chr8_1:62572531-62572550 | Msa1205910:intron | 25.0% |
| ! | AAAATTAATAGGATCTATGG+TGG | - | chr8_1:62572706-62572725 | None:intergenic | 25.0% |
| !! | AGATGAATTTCTGGAAAATA+AGG | - | chr8_1:62572904-62572923 | None:intergenic | 25.0% |
| ! | TGATGTAGTTTATTGATGAA+TGG | - | chr8_1:62573084-62573103 | None:intergenic | 25.0% |
| ! | TCAAAAACAAAATCTAGGTT+CGG | + | chr8_1:62573165-62573184 | Msa1205910:intron | 25.0% |
| !! | TATAAAGTTTTGCACAAACT+GGG | - | chr8_1:62573328-62573347 | None:intergenic | 25.0% |
| !!! | TTTGGGTTTTTGAGATTAAT+GGG | - | chr8_1:62573466-62573485 | None:intergenic | 25.0% |
| !!! | ATTTGGGTTTTTGAGATTAA+TGG | - | chr8_1:62573467-62573486 | None:intergenic | 25.0% |
| ! | GAAAACTGAAGTAAAAATTG+AGG | + | chr8_1:62573647-62573666 | Msa1205910:intron | 25.0% |
| ! | GAAAACAACAAATTAGTTAG+GGG | + | chr8_1:62573708-62573727 | Msa1205910:intron | 25.0% |
| ! | TATAGGCTTAATTCGATATT+TGG | - | chr8_1:62573735-62573754 | None:intergenic | 25.0% |
| !! | CAAGAAATCCATTATGATTT+TGG | - | chr8_1:62574049-62574068 | None:intergenic | 25.0% |
| ! | CTTCTCATTATTGTATAGAT+TGG | + | chr8_1:62574231-62574250 | Msa1205910:intron | 25.0% |
| TGAATACAACTTATTTGACG+AGG | + | chr8_1:62570636-62570655 | Msa1205910:CDS | 30.0% | |
| ATAACCCATAAAATTGGGTT+GGG | - | chr8_1:62570891-62570910 | None:intergenic | 30.0% | |
| AAATTTGTGTTTCCTAACTC+TGG | - | chr8_1:62570925-62570944 | None:intergenic | 30.0% | |
| TCAAGCTCAAGATAATGTTA+AGG | + | chr8_1:62571002-62571021 | Msa1205910:intron | 30.0% | |
| ATAGTACGTATACCTTCATT+AGG | - | chr8_1:62571092-62571111 | None:intergenic | 30.0% | |
| GAAATGACTGGATCAAAATT+TGG | - | chr8_1:62571247-62571266 | None:intergenic | 30.0% | |
| !! | CTCTAACGTTATTTTACACA+TGG | - | chr8_1:62571410-62571429 | None:intergenic | 30.0% |
| TTGTAACAAATGTGTTTGAC+TGG | + | chr8_1:62571618-62571637 | Msa1205910:intron | 30.0% | |
| AGCCAAAAACACATAAAGAT+GGG | - | chr8_1:62571673-62571692 | None:intergenic | 30.0% | |
| AAGCCAAAAACACATAAAGA+TGG | - | chr8_1:62571674-62571693 | None:intergenic | 30.0% | |
| TACCTTTCTCTCTATTACTT+TGG | + | chr8_1:62571900-62571919 | Msa1205910:intron | 30.0% | |
| AACCAAAGTAATAGAGAGAA+AGG | - | chr8_1:62571905-62571924 | None:intergenic | 30.0% | |
| CCATTTGTTTGACAATCTAA+TGG | - | chr8_1:62571969-62571988 | None:intergenic | 30.0% | |
| CCATTAGATTGTCAAACAAA+TGG | + | chr8_1:62571966-62571985 | Msa1205910:intron | 30.0% | |
| ! | ACACTTTTGTATTTTGCATC+AGG | + | chr8_1:62572031-62572050 | Msa1205910:intron | 30.0% |
| TGCAAAAGGGTTAAACTTAT+GGG | - | chr8_1:62572135-62572154 | None:intergenic | 30.0% | |
| ! | ACCTAATCAAAATTGGTCTA+GGG | - | chr8_1:62572167-62572186 | None:intergenic | 30.0% |
| ! | CTGACTTTCTATTTTCATAG+GGG | - | chr8_1:62572278-62572297 | None:intergenic | 30.0% |
| ! | CAAAGACTTAATTGCAGTTT+TGG | - | chr8_1:62572462-62572481 | None:intergenic | 30.0% |
| AAAACTGAAGCAAGAATTGA+GGG | - | chr8_1:62572618-62572637 | None:intergenic | 30.0% | |
| ! | TCTTGCTTCAGTTTTCAAAA+AGG | + | chr8_1:62572623-62572642 | Msa1205910:intron | 30.0% |
| AAAGTTAAAGTTAACGGTCT+AGG | - | chr8_1:62572650-62572669 | None:intergenic | 30.0% | |
| TTGTGATGAAGATGAATTTC+TGG | - | chr8_1:62572913-62572932 | None:intergenic | 30.0% | |
| !! | AAAAGGTTGATGAAGGTTTA+AGG | - | chr8_1:62572993-62573012 | None:intergenic | 30.0% |
| ACTGTCAAAAAAAAAAGAGG+AGG | + | chr8_1:62573119-62573138 | Msa1205910:intron | 30.0% | |
| ! | ACATTTTTGAATTGGGTTTC+TGG | - | chr8_1:62573232-62573251 | None:intergenic | 30.0% |
| ! | GGGTTTCACATTTTTGAATT+GGG | - | chr8_1:62573239-62573258 | None:intergenic | 30.0% |
| ! | TGGGTTTCACATTTTTGAAT+TGG | - | chr8_1:62573240-62573259 | None:intergenic | 30.0% |
| ! | CTATAAAGTTTTGCACAAAC+TGG | - | chr8_1:62573329-62573348 | None:intergenic | 30.0% |
| AAGAATTCGAGAGAAGAAAT+TGG | - | chr8_1:62573368-62573387 | None:intergenic | 30.0% | |
| TTGATGTTGTGAAGTAGATT+TGG | - | chr8_1:62573400-62573419 | None:intergenic | 30.0% | |
| GATTAAATCAATTTGAGAGG+GGG | - | chr8_1:62573429-62573448 | None:intergenic | 30.0% | |
| GGATTAAATCAATTTGAGAG+GGG | - | chr8_1:62573430-62573449 | None:intergenic | 30.0% | |
| GGGATTAAATCAATTTGAGA+GGG | - | chr8_1:62573431-62573450 | None:intergenic | 30.0% | |
| AGGGATTAAATCAATTTGAG+AGG | - | chr8_1:62573432-62573451 | None:intergenic | 30.0% | |
| TTAATGGGATGAATTAGCTA+GGG | - | chr8_1:62573451-62573470 | None:intergenic | 30.0% | |
| ATTAATGGGATGAATTAGCT+AGG | - | chr8_1:62573452-62573471 | None:intergenic | 30.0% | |
| CTGACAACAATAAAGGATTT+GGG | - | chr8_1:62573483-62573502 | None:intergenic | 30.0% | |
| AGTTTGTGCAATTGAATTTC+TGG | + | chr8_1:62573513-62573532 | Msa1205910:intron | 30.0% | |
| GTTTGTGCAATTGAATTTCT+GGG | + | chr8_1:62573514-62573533 | Msa1205910:intron | 30.0% | |
| TTTGTGCAATTGAATTTCTG+GGG | + | chr8_1:62573515-62573534 | Msa1205910:intron | 30.0% | |
| TGGGGAGATTTAATACAAAT+TGG | + | chr8_1:62573533-62573552 | Msa1205910:intron | 30.0% | |
| GGGGAGATTTAATACAAATT+GGG | + | chr8_1:62573534-62573553 | Msa1205910:intron | 30.0% | |
| GGGAGATTTAATACAAATTG+GGG | + | chr8_1:62573535-62573554 | Msa1205910:intron | 30.0% | |
| !! | CAAAGAATTTAAAGAGCGTT+TGG | + | chr8_1:62573851-62573870 | Msa1205910:CDS | 30.0% |
| !! | TTTGGCAATTTTAGAAGAAG+AGG | + | chr8_1:62573869-62573888 | Msa1205910:CDS | 30.0% |
| !! | TTGGCAATTTTAGAAGAAGA+GGG | + | chr8_1:62573870-62573889 | Msa1205910:CDS | 30.0% |
| CTGGAAAACATATCTTGATT+CGG | + | chr8_1:62574015-62574034 | Msa1205910:CDS | 30.0% | |
| ATCCAATGCCAAAATCATAA+TGG | + | chr8_1:62574038-62574057 | Msa1205910:CDS | 30.0% | |
| !! | ATCCATTATGATTTTGGCAT+TGG | - | chr8_1:62574043-62574062 | None:intergenic | 30.0% |
| TGTCGTCAATAACAATGTTA+TGG | + | chr8_1:62574106-62574125 | Msa1205910:CDS | 30.0% | |
| ATTATTGTATAGATTGGCGA+AGG | + | chr8_1:62574237-62574256 | Msa1205910:intron | 30.0% | |
| ATACAACTTATTTGACGAGG+AGG | + | chr8_1:62570639-62570658 | Msa1205910:CDS | 35.0% | |
| ! | AGATTGTGCATTTTCCTTAG+AGG | + | chr8_1:62570684-62570703 | Msa1205910:CDS | 35.0% |
| TACTCTTAGCAAGGAAGAAA+CGG | + | chr8_1:62570756-62570775 | Msa1205910:CDS | 35.0% | |
| !! | AGGAAGAAACGGATTTTGAT+CGG | + | chr8_1:62570767-62570786 | Msa1205910:CDS | 35.0% |
| ! | CAAACCCAACCCAATTTTAT+GGG | + | chr8_1:62570884-62570903 | Msa1205910:CDS | 35.0% |
| GATAACCCATAAAATTGGGT+TGG | - | chr8_1:62570892-62570911 | None:intergenic | 35.0% | |
| CGCTGATAACCCATAAAATT+GGG | - | chr8_1:62570896-62570915 | None:intergenic | 35.0% | |
| ACGCTGATAACCCATAAAAT+TGG | - | chr8_1:62570897-62570916 | None:intergenic | 35.0% | |
| ATACCTTCATTAGGTTAGGA+AGG | - | chr8_1:62571083-62571102 | None:intergenic | 35.0% | |
| ACGTATACCTTCATTAGGTT+AGG | - | chr8_1:62571087-62571106 | None:intergenic | 35.0% | |
| CAGATACTAAGAGAAATGAC+TGG | - | chr8_1:62571259-62571278 | None:intergenic | 35.0% | |
| AATGTGTTTGACTGGTGTAA+TGG | + | chr8_1:62571626-62571645 | Msa1205910:intron | 35.0% | |
| ! | ACCCCATCTTTATGTGTTTT+TGG | + | chr8_1:62571668-62571687 | Msa1205910:intron | 35.0% |
| GCCAAAAACACATAAAGATG+GGG | - | chr8_1:62571672-62571691 | None:intergenic | 35.0% | |
| GTTGTACAAATATCTAAGGG+CGG | - | chr8_1:62571827-62571846 | None:intergenic | 35.0% | |
| ACGCAAGATTGTGATACTTA+GGG | - | chr8_1:62572076-62572095 | None:intergenic | 35.0% | |
| AACGCAAGATTGTGATACTT+AGG | - | chr8_1:62572077-62572096 | None:intergenic | 35.0% | |
| ! | GTATCACAATCTTGCGTTTT+TGG | + | chr8_1:62572079-62572098 | Msa1205910:intron | 35.0% |
| GTGCAAAAGGGTTAAACTTA+TGG | - | chr8_1:62572136-62572155 | None:intergenic | 35.0% | |
| ! | GTTTAACCCTTTTGCACTTT+TGG | + | chr8_1:62572139-62572158 | Msa1205910:intron | 35.0% |
| ! | CTAATCAAAATTGGTCTAGG+GGG | - | chr8_1:62572165-62572184 | None:intergenic | 35.0% |
| ! | CCTAATCAAAATTGGTCTAG+GGG | - | chr8_1:62572166-62572185 | None:intergenic | 35.0% |
| ! | GACCTAATCAAAATTGGTCT+AGG | - | chr8_1:62572168-62572187 | None:intergenic | 35.0% |
| TGATTAGGTCAATACATACG+TGG | + | chr8_1:62572178-62572197 | Msa1205910:intron | 35.0% | |
| TGCAAAAGAGGGTAAACTTA+GGG | + | chr8_1:62572375-62572394 | Msa1205910:intron | 35.0% | |
| ! | GTATCACAATCTTGCGATTT+TGG | - | chr8_1:62572431-62572450 | None:intergenic | 35.0% |
| GCAAGATTGTGATACTTAGA+GGG | + | chr8_1:62572436-62572455 | Msa1205910:intron | 35.0% | |
| GAAAACTGAAGCAAGAATTG+AGG | - | chr8_1:62572619-62572638 | None:intergenic | 35.0% | |
| AAGTGGAACTCAAACAATGT+TGG | + | chr8_1:62572679-62572698 | Msa1205910:intron | 35.0% | |
| ! | CGCAGGTCTATTTTATCTTA+TGG | + | chr8_1:62572776-62572795 | Msa1205910:intron | 35.0% |
| ACAACAACAACAATCAATCC+AGG | + | chr8_1:62572870-62572889 | Msa1205910:intron | 35.0% | |
| GAAGGTTTAAGGAAGAAGAA+TGG | - | chr8_1:62572982-62573001 | None:intergenic | 35.0% | |
| TGAAGAAGAAGAAGAAGAAG+TGG | - | chr8_1:62573038-62573057 | None:intergenic | 35.0% | |
| AAAATCTAGGTTCGGATTTG+TGG | + | chr8_1:62573173-62573192 | Msa1205910:intron | 35.0% | |
| ! | GTTTCTAGAAGTTGGAAAAG+GGG | - | chr8_1:62573306-62573325 | None:intergenic | 35.0% |
| ! | GGTTTCTAGAAGTTGGAAAA+GGG | - | chr8_1:62573307-62573326 | None:intergenic | 35.0% |
| GAGAGAAGAAATTGGAAAAG+GGG | - | chr8_1:62573360-62573379 | None:intergenic | 35.0% | |
| CGAGAGAAGAAATTGGAAAA+GGG | - | chr8_1:62573361-62573380 | None:intergenic | 35.0% | |
| TCGAGAGAAGAAATTGGAAA+AGG | - | chr8_1:62573362-62573381 | None:intergenic | 35.0% | |
| CCTGACAACAATAAAGGATT+TGG | - | chr8_1:62573484-62573503 | None:intergenic | 35.0% | |
| CCAAATCCTTTATTGTTGTC+AGG | + | chr8_1:62573481-62573500 | Msa1205910:intron | 35.0% | |
| GATTAACGACAGTTACTTGT+TGG | + | chr8_1:62573607-62573626 | Msa1205910:intron | 35.0% | |
| GATGGACAAGACTTCAATAT+TGG | + | chr8_1:62573809-62573828 | Msa1205910:intron | 35.0% | |
| !! | TGGCAATTTTAGAAGAAGAG+GGG | + | chr8_1:62573871-62573890 | Msa1205910:CDS | 35.0% |
| AATAACAATGTTATGGCCCT+TGG | + | chr8_1:62574113-62574132 | Msa1205910:CDS | 35.0% | |
| ATAACAATGTTATGGCCCTT+GGG | + | chr8_1:62574114-62574133 | Msa1205910:CDS | 35.0% | |
| CACAATCTGTGTCATGTGAA+AGG | - | chr8_1:62570672-62570691 | None:intergenic | 40.0% | |
| CTGAGTCAAACATTGTTGCA+TGG | - | chr8_1:62570722-62570741 | None:intergenic | 40.0% | |
| CATGCAACAATGTTTGACTC+AGG | + | chr8_1:62570720-62570739 | Msa1205910:CDS | 40.0% | |
| CATTTCCTCTACTCTTAGCA+AGG | + | chr8_1:62570747-62570766 | Msa1205910:CDS | 40.0% | |
| TTCTTCCTTGCTAAGAGTAG+AGG | - | chr8_1:62570755-62570774 | None:intergenic | 40.0% | |
| !! | CCATAAAATTGGGTTGGGTT+TGG | - | chr8_1:62570886-62570905 | None:intergenic | 40.0% |
| ! | CCAAACCCAACCCAATTTTA+TGG | + | chr8_1:62570883-62570902 | Msa1205910:CDS | 40.0% |
| ! | TGCAAGAGCAATGAAGCATT+GGG | - | chr8_1:62571055-62571074 | None:intergenic | 40.0% |
| TCTCCTTCCTAACCTAATGA+AGG | + | chr8_1:62571077-62571096 | Msa1205910:intron | 40.0% | |
| CACACATGCGCTTAATAATG+TGG | + | chr8_1:62571310-62571329 | Msa1205910:intron | 40.0% | |
| AAATATCTAAGGGCGGAGTT+AGG | - | chr8_1:62571820-62571839 | None:intergenic | 40.0% | |
| GCAAGATTGTGATACTTAGG+GGG | - | chr8_1:62572074-62572093 | None:intergenic | 40.0% | |
| CGCAAGATTGTGATACTTAG+GGG | - | chr8_1:62572435-62572454 | None:intergenic | 40.0% | |
| !!! | CCCCTAGACCAATTTTGATT+AGG | + | chr8_1:62572163-62572182 | Msa1205910:intron | 40.0% |
| TCGCAAGATTGTGACACTTA+GGG | - | chr8_1:62572248-62572267 | None:intergenic | 40.0% | |
| ATCGCAAGATTGTGACACTT+AGG | - | chr8_1:62572249-62572268 | None:intergenic | 40.0% | |
| CATCCACATCACTTAAAGTG+AGG | - | chr8_1:62572309-62572328 | None:intergenic | 40.0% | |
| !! | TGCATTGACTCGGTCAAAAT+TGG | + | chr8_1:62572336-62572355 | Msa1205910:intron | 40.0% |
| ! | GTGGTCAAAAGTGCAAAAGA+GGG | + | chr8_1:62572364-62572383 | Msa1205910:intron | 40.0% |
| GTGCAAAAGAGGGTAAACTT+AGG | + | chr8_1:62572374-62572393 | Msa1205910:intron | 40.0% | |
| GCAAAAGAGGGTAAACTTAG+GGG | + | chr8_1:62572376-62572395 | Msa1205910:intron | 40.0% | |
| CAAAAGAGGGTAAACTTAGG+GGG | + | chr8_1:62572377-62572396 | Msa1205910:intron | 40.0% | |
| CGCAAGATTGTGATACTTAG+AGG | + | chr8_1:62572435-62572454 | Msa1205910:intron | 40.0% | |
| AATAGACCTGCGAAATCCAA+TGG | - | chr8_1:62572768-62572787 | None:intergenic | 40.0% | |
| GAAGATGATGAAGAAGAGTG+AGG | - | chr8_1:62572846-62572865 | None:intergenic | 40.0% | |
| GAAAATAAGGACTGCATTCC+TGG | - | chr8_1:62572891-62572910 | None:intergenic | 40.0% | |
| TGGATCGAACTAGAAGGAAA+GGG | - | chr8_1:62573018-62573037 | None:intergenic | 40.0% | |
| AAGAAGTGGATCGAACTAGA+AGG | - | chr8_1:62573024-62573043 | None:intergenic | 40.0% | |
| !!! | GTTTCTGGTTCAAGTTTTGC+TGG | - | chr8_1:62573217-62573236 | None:intergenic | 40.0% |
| ! | ATGTTTTCACGTTGTCGAAC+TGG | - | chr8_1:62573267-62573286 | None:intergenic | 40.0% |
| ! | GGGTTTCTAGAAGTTGGAAA+AGG | - | chr8_1:62573308-62573327 | None:intergenic | 40.0% |
| ! | CAAACTGGGTTTCTAGAAGT+TGG | - | chr8_1:62573314-62573333 | None:intergenic | 40.0% |
| CCTCATCCTGACAACAATAA+AGG | - | chr8_1:62573490-62573509 | None:intergenic | 40.0% | |
| CCTTTATTGTTGTCAGGATG+AGG | + | chr8_1:62573487-62573506 | Msa1205910:intron | 40.0% | |
| CGAGAACAAACGCAATTTGA+CGG | + | chr8_1:62573580-62573599 | Msa1205910:intron | 40.0% | |
| ! | AACGACAGTTACTTGTTGGA+CGG | + | chr8_1:62573611-62573630 | Msa1205910:intron | 40.0% |
| AGAAGAGGGGAAGAAATCAA+AGG | + | chr8_1:62573884-62573903 | Msa1205910:CDS | 40.0% | |
| ATCAAAGGAAGATCAGTCGA+TGG | + | chr8_1:62573899-62573918 | Msa1205910:CDS | 40.0% | |
| CACTTTCAGTTTCACAACAG+AGG | - | chr8_1:62573944-62573963 | None:intergenic | 40.0% | |
| ! | TTCCACGTTGATGAGTGATT+CGG | - | chr8_1:62573985-62574004 | None:intergenic | 40.0% |
| TAACAATGTTATGGCCCTTG+GGG | + | chr8_1:62574115-62574134 | Msa1205910:CDS | 40.0% | |
| TACCATCATTGCTGAGGTAA+AGG | + | chr8_1:62574154-62574173 | Msa1205910:intron | 40.0% | |
| ATCCTTTACCTCAGCAATGA+TGG | - | chr8_1:62574159-62574178 | None:intergenic | 40.0% | |
| AGGCTACAACTTGACCATAA+AGG | + | chr8_1:62574257-62574276 | Msa1205910:CDS | 40.0% | |
| !! | GTTTTGGACGAGTTCCTTTA+TGG | - | chr8_1:62574274-62574293 | None:intergenic | 40.0% |
| CTGCAAGAGCAATGAAGCAT+TGG | - | chr8_1:62571056-62571075 | None:intergenic | 45.0% | |
| GTATCCAAGACACTGGATCA+GGG | + | chr8_1:62571142-62571161 | Msa1205910:intron | 45.0% | |
| TATCCAAGACACTGGATCAG+GGG | + | chr8_1:62571143-62571162 | Msa1205910:intron | 45.0% | |
| GCAAGATTGTGACACTTAGG+GGG | - | chr8_1:62572246-62572265 | None:intergenic | 45.0% | |
| CGCAAGATTGTGACACTTAG+GGG | - | chr8_1:62572247-62572266 | None:intergenic | 45.0% | |
| GCACCTCACTTTAAGTGATG+TGG | + | chr8_1:62572303-62572322 | Msa1205910:intron | 45.0% | |
| !! | ATGACACGCATGCATTGACT+CGG | + | chr8_1:62572326-62572345 | Msa1205910:intron | 45.0% |
| !! | TGACTCGGTCAAAATTGGTC+TGG | + | chr8_1:62572341-62572360 | Msa1205910:intron | 45.0% |
| ! | GACTCGGTCAAAATTGGTCT+GGG | + | chr8_1:62572342-62572361 | Msa1205910:intron | 45.0% |
| ! | GGTGGTCAAAAGTGCAAAAG+AGG | + | chr8_1:62572363-62572382 | Msa1205910:intron | 45.0% |
| CAATGACCATTGGATTTCGC+AGG | + | chr8_1:62572759-62572778 | Msa1205910:intron | 45.0% | |
| !! | AAGGGGGAAAAGGTTGATGA+AGG | - | chr8_1:62573000-62573019 | None:intergenic | 45.0% |
| ACTAGAAGGAAAGGGGGAAA+AGG | - | chr8_1:62573010-62573029 | None:intergenic | 45.0% | |
| GATCGAACTAGAAGGAAAGG+GGG | - | chr8_1:62573016-62573035 | None:intergenic | 45.0% | |
| GGATCGAACTAGAAGGAAAG+GGG | - | chr8_1:62573017-62573036 | None:intergenic | 45.0% | |
| GTGGATCGAACTAGAAGGAA+AGG | - | chr8_1:62573019-62573038 | None:intergenic | 45.0% | |
| ! | ACGTTGTCGAACTGGTTTCT+GGG | - | chr8_1:62573259-62573278 | None:intergenic | 45.0% |
| ! | CAGTTACTTGTTGGACGGAA+AGG | + | chr8_1:62573616-62573635 | Msa1205910:intron | 45.0% |
| AAAGGAAGATCAGTCGATGG+TGG | + | chr8_1:62573902-62573921 | Msa1205910:CDS | 45.0% | |
| TCAGTTTCACAACAGAGGTC+TGG | - | chr8_1:62573939-62573958 | None:intergenic | 45.0% | |
| !! | AACGTGGAAGCAAAAGTGTC+TGG | + | chr8_1:62573996-62574015 | Msa1205910:CDS | 45.0% |
| CGACATTACCATCATTGCTG+AGG | + | chr8_1:62574148-62574167 | Msa1205910:CDS | 45.0% | |
| !! | GTTTAAATTTAAAAATTAAT+AGG | - | chr8_1:62572717-62572736 | None:intergenic | 5.0% |
| !! | TTTAAAAAAAATAAATCAAA+CGG | - | chr8_1:62572739-62572758 | None:intergenic | 5.0% |
| !! | AAATTAAAGTAATTTAATAT+AGG | - | chr8_1:62573752-62573771 | None:intergenic | 5.0% |
| GGTCTGTGTCTGTTCCTCTA+AGG | - | chr8_1:62570701-62570720 | None:intergenic | 50.0% | |
| TCAGCGTCATTGCCAGAGTT+AGG | + | chr8_1:62570910-62570929 | Msa1205910:CDS | 50.0% | |
| CGTATCCAAGACACTGGATC+AGG | + | chr8_1:62571141-62571160 | Msa1205910:intron | 50.0% | |
| ! | TGGTGTTGAAGGTGTGCATC+TGG | - | chr8_1:62571797-62571816 | None:intergenic | 50.0% |
| TATCTAAGGGCGGAGTTAGG+TGG | - | chr8_1:62571817-62571836 | None:intergenic | 50.0% | |
| ! | AGGGGGCCAAAAGTGCAAAA+GGG | - | chr8_1:62572148-62572167 | None:intergenic | 50.0% |
| ! | TAGGGGGCCAAAAGTGCAAA+AGG | - | chr8_1:62572149-62572168 | None:intergenic | 50.0% |
| ! | TCGGTCAAAATTGGTCTGGG+TGG | + | chr8_1:62572345-62572364 | Msa1205910:intron | 50.0% |
| ! | CACGTTGTCGAACTGGTTTC+TGG | - | chr8_1:62573260-62573279 | None:intergenic | 50.0% |
| ! | CACGTTGATGAGTGATTCGG+TGG | - | chr8_1:62573982-62574001 | None:intergenic | 50.0% |
| CACCGAATCACTCATCAACG+TGG | + | chr8_1:62573980-62573999 | Msa1205910:CDS | 50.0% | |
| GTCGACGATAGAATCCCCAA+GGG | - | chr8_1:62574132-62574151 | None:intergenic | 50.0% | |
| TGTCGACGATAGAATCCCCA+AGG | - | chr8_1:62574133-62574152 | None:intergenic | 50.0% | |
| ACTCGTCCAAAACCTACGCA+TGG | + | chr8_1:62574281-62574300 | Msa1205910:CDS | 50.0% | |
| ! | ATGCTGCCATGCGTAGGTTT+TGG | - | chr8_1:62574290-62574309 | None:intergenic | 50.0% |
| ACTTCAATGCTGCCATGCGT+AGG | - | chr8_1:62574296-62574315 | None:intergenic | 50.0% | |
| GCAGTGCGTATCCAAGACAC+TGG | + | chr8_1:62571135-62571154 | Msa1205910:intron | 55.0% | |
| ! | GCGGAGTTAGGTGGTGTTGA+AGG | - | chr8_1:62571808-62571827 | None:intergenic | 55.0% |
| GCGCCCCTGATCCAGTGTCT+TGG | - | chr8_1:62571149-62571168 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 62570625 | 62574332 | 62570625 | ID=Msa1205910;Name=Msa1205910 |
| chr8_1 | mRNA | 62570625 | 62574332 | 62570625 | ID=Msa1205910-mRNA-1;Parent=Msa1205910;Name=Msa1205910-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|3|0|278 |
| chr8_1 | exon | 62570625 | 62571017 | 62570625 | ID=Msa1205910-mRNA-1:exon:20291;Parent=Msa1205910-mRNA-1 |
| chr8_1 | exon | 62573810 | 62574169 | 62573810 | ID=Msa1205910-mRNA-1:exon:20292;Parent=Msa1205910-mRNA-1 |
| chr8_1 | exon | 62574249 | 62574332 | 62574249 | ID=Msa1205910-mRNA-1:exon:20293;Parent=Msa1205910-mRNA-1 |
| chr8_1 | CDS | 62570625 | 62571017 | 62570625 | ID=Msa1205910-mRNA-1:cds;Parent=Msa1205910-mRNA-1 |
| chr8_1 | CDS | 62573810 | 62574169 | 62573810 | ID=Msa1205910-mRNA-1:cds;Parent=Msa1205910-mRNA-1 |
| chr8_1 | CDS | 62574249 | 62574332 | 62574249 | ID=Msa1205910-mRNA-1:cds;Parent=Msa1205910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
