AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0354670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0354670 MtrunA17_Chr3g0090331 91.592 333 25 1 1 330 1 333 0.0 638
Msa0354670 MtrunA17_Chr4g0020241 70.181 332 93 4 1 329 1 329 8.54e-166 471
Msa0354670 MtrunA17_Chr3g0118851 63.359 262 94 2 70 330 76 336 8.57e-114 338
Msa0354670 MtrunA17_Chr3g0118831 60.821 268 96 4 68 330 74 337 2.09e-112 334
Msa0354670 MtrunA17_Chr3g0118881 60.305 262 102 2 70 330 76 336 1.55e-110 330
Msa0354670 MtrunA17_Chr3g0118841 61.069 262 100 2 70 330 77 337 1.98e-109 327
Msa0354670 MtrunA17_Chr3g0118891 60.606 264 98 4 70 330 76 336 3.98e-109 325
Msa0354670 MtrunA17_Chr3g0118861 56.000 275 109 3 68 330 72 346 2.54e-106 319
Msa0354670 MtrunA17_Chr1g0153881 50.456 329 148 6 6 323 18 342 6.92e-105 316
Msa0354670 MtrunA17_Chr1g0153941 49.536 323 147 6 13 323 12 330 2.16e-99 302
Msa0354670 MtrunA17_Chr7g0219051 53.731 268 121 3 66 332 30 295 2.71e-97 295
Msa0354670 MtrunA17_Chr1g0199991 51.103 272 129 3 57 325 19 289 2.68e-96 293
Msa0354670 MtrunA17_Chr4g0038311 51.880 266 125 3 61 323 24 289 1.48e-93 286
Msa0354670 MtrunA17_Chr1g0199971 50.190 263 128 2 66 325 27 289 1.00e-92 283
Msa0354670 MtrunA17_Chr2g0318911 49.815 271 133 3 56 323 24 294 2.36e-92 283
Msa0354670 MtrunA17_Chr2g0309511 50.192 261 127 3 66 323 33 293 3.69e-92 282
Msa0354670 MtrunA17_Chr2g0309521 49.808 261 128 3 66 323 33 293 9.29e-91 279
Msa0354670 MtrunA17_Chr4g0068841 52.326 258 120 3 68 323 35 291 1.45e-88 273
Msa0354670 MtrunA17_Chr2g0309541 48.352 273 134 5 56 323 24 294 2.12e-88 273
Msa0354670 MtrunA17_Chr1g0153931 53.876 258 104 5 6 251 3 257 3.08e-87 263
Msa0354670 MtrunA17_Chr4g0047861 52.326 258 117 4 70 323 52 307 1.12e-85 266
Msa0354670 MtrunA17_Chr2g0281621 49.091 275 135 3 53 323 14 287 2.43e-84 262
Msa0354670 MtrunA17_Chr3g0126031 48.485 264 133 3 62 323 19 281 9.77e-84 261
Msa0354670 MtrunA17_Chr5g0431301 47.778 270 130 4 62 323 20 286 1.27e-81 255
Msa0354670 MtrunA17_Chr3g0094811 49.254 268 122 4 63 323 22 282 9.75e-81 253
Msa0354670 MtrunA17_Chr4g0068861 48.450 258 129 4 68 323 81 336 5.90e-80 251
Msa0354670 MtrunA17_Chr7g0221551 46.341 287 138 5 57 331 16 298 1.32e-79 250
Msa0354670 MtrunA17_Chr3g0126051 46.512 258 135 3 69 323 31 288 1.28e-78 248
Msa0354670 MtrunA17_Chr2g0304931 46.570 277 130 6 67 331 34 304 2.75e-76 241
Msa0354670 MtrunA17_Chr3g0131731 47.407 270 129 6 70 330 29 294 1.41e-75 239
Msa0354670 MtrunA17_Chr8g0385871 45.149 268 136 4 70 330 32 295 8.55e-74 235
Msa0354670 MtrunA17_Chr1g0165811 46.371 248 123 5 63 308 22 261 3.19e-69 217
Msa0354670 MtrunA17_Chr2g0281641 48.357 213 105 3 123 331 7 218 1.47e-61 201
Msa0354670 MtrunA17_Chr8g0338461 38.628 277 159 5 51 321 13 284 4.70e-60 200
Msa0354670 MtrunA17_Chr7g0234051 39.245 265 153 4 63 321 21 283 3.66e-55 187
Msa0354670 MtrunA17_Chr7g0249431 39.286 280 154 8 57 322 13 290 3.89e-55 187
Msa0354670 MtrunA17_Chr7g0234041 41.964 224 116 4 61 278 16 231 8.73e-47 164
Msa0354670 MtrunA17_Chr1g0204191 34.286 280 135 8 57 323 76 319 3.44e-40 147
Msa0354670 MtrunA17_Chr4g0028271 34.188 234 141 5 83 308 95 323 5.38e-38 141
Msa0354670 MtrunA17_Chr4g0028241 41.176 170 97 3 88 257 92 258 3.37e-36 136
Msa0354670 MtrunA17_Chr1g0171411 37.879 198 118 5 83 279 81 274 5.37e-36 135
Msa0354670 MtrunA17_Chr2g0327401 33.597 253 149 8 39 286 61 299 1.16e-35 135
Msa0354670 MtrunA17_Chr4g0028261 32.932 249 149 9 77 315 109 349 2.19e-35 134
Msa0354670 MtrunA17_Chr2g0285371 31.538 260 167 7 72 323 34 290 1.20e-34 132
Msa0354670 MtrunA17_Chr4g0028281 32.031 256 166 5 53 304 60 311 3.41e-34 130
Msa0354670 MtrunA17_Chr2g0327381 33.036 224 145 4 82 304 91 310 5.01e-34 131
Msa0354670 MtrunA17_Chr2g0285351 30.385 260 171 6 72 323 33 290 3.00e-33 128
Msa0354670 MtrunA17_Chr1g0199171 32.411 253 146 8 51 285 41 286 5.59e-33 127
Msa0354670 MtrunA17_Chr2g0327371 35.450 189 108 4 99 286 97 272 2.47e-30 120
Msa0354670 MtrunA17_Chr4g0009681 33.036 224 139 7 71 287 36 255 1.32e-29 117
Msa0354670 MtrunA17_Chr4g0009651 31.696 224 142 7 71 287 39 258 1.36e-29 117
Msa0354670 MtrunA17_Chr4g0009711 31.933 238 147 9 59 287 27 258 2.95e-29 117
Msa0354670 MtrunA17_Chr4g0009661 31.858 226 139 7 71 287 39 258 4.46e-29 116
Msa0354670 MtrunA17_Chr5g0447441 37.079 178 103 6 88 260 44 217 5.19e-29 116
Msa0354670 MtrunA17_Chr3g0133011 30.556 252 161 7 62 301 44 293 9.89e-29 115
Msa0354670 MtrunA17_Chr4g0009701 29.323 266 171 10 71 325 39 298 1.25e-28 115
Msa0354670 MtrunA17_Chr4g0044051 36.702 188 108 6 79 260 39 221 4.49e-28 113
Msa0354670 MtrunA17_Chr2g0285381 29.960 247 158 8 72 308 37 278 1.35e-27 112
Msa0354670 MtrunA17_Chr4g0009641 27.273 275 169 7 57 325 25 274 3.55e-27 110
Msa0354670 MtrunA17_Chr4g0009671 28.295 258 169 8 78 325 12 263 8.00e-26 107
Msa0354670 MtrunA17_Chr2g0279371 35.294 187 99 5 57 238 14 183 6.72e-25 99.4
Msa0354670 MtrunA17_Chr7g0229631 47.664 107 52 3 51 157 14 116 8.48e-25 98.2
Msa0354670 MtrunA17_Chr3g0093971 27.500 280 179 11 57 323 15 283 6.31e-24 101
Msa0354670 MtrunA17_Chr7g0229611 44.792 96 51 2 51 146 6 99 3.30e-20 84.3
Msa0354670 MtrunA17_Chr7g0229621 43.750 96 52 2 51 146 6 99 1.36e-18 80.1
Msa0354670 MtrunA17_Chr4g0027731 24.528 265 164 8 84 329 32 279 6.05e-16 78.6
Msa0354670 MtrunA17_Chr2g0281631 50.877 57 28 0 67 123 41 97 7.73e-14 67.4
Msa0354670 MtrunA17_Chr4g0009721 31.967 122 75 4 71 185 35 155 1.87e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0354670 AT3G63470.1 58.934 319 118 4 21 330 24 338 5.11e-133 388
Msa0354670 AT3G52020.1 50.459 327 149 6 12 329 11 333 2.62e-112 335
Msa0354670 AT3G52000.1 50.453 331 149 7 1 330 1 317 9.76e-104 313
Msa0354670 AT2G35770.1 55.263 266 118 1 66 330 32 297 1.39e-99 301
Msa0354670 AT4G30610.1 55.556 261 111 3 66 323 27 285 1.06e-96 294
Msa0354670 AT4G30810.1 50.958 261 127 1 65 324 31 291 2.21e-96 294
Msa0354670 AT2G35780.1 54.023 261 113 4 66 323 24 280 2.89e-96 293
Msa0354670 AT5G23210.3 52.206 272 127 3 55 324 35 305 1.70e-94 288
Msa0354670 AT5G23210.1 52.206 272 127 3 55 324 35 305 7.22e-94 288
Msa0354670 AT2G05850.1 47.164 335 159 7 1 330 1 322 7.69e-94 288
Msa0354670 AT3G02110.1 52.124 259 121 3 66 323 32 288 9.08e-94 287
Msa0354670 AT2G24000.1 51.737 259 123 2 66 323 25 282 3.51e-93 285
Msa0354670 AT3G52010.1 45.946 333 164 7 1 329 1 321 1.19e-92 285
Msa0354670 AT3G07990.1 52.713 258 119 2 69 323 31 288 2.29e-92 283
Msa0354670 AT2G24010.1 51.331 263 124 3 66 326 25 285 1.51e-90 278
Msa0354670 AT1G11080.2 53.992 263 114 3 67 323 46 307 1.19e-89 277
Msa0354670 AT1G11080.1 53.992 263 114 3 67 323 46 307 1.74e-89 276
Msa0354670 AT3G56540.1 56.223 233 93 2 1 225 1 232 8.01e-89 267
Msa0354670 AT1G61130.1 50.570 263 125 3 69 327 29 290 1.68e-88 273
Msa0354670 AT4G15100.1 52.692 260 118 3 68 323 41 299 4.34e-88 273
Msa0354670 AT5G08260.1 51.341 261 124 3 66 323 34 294 1.07e-86 269
Msa0354670 AT2G12480.4 49.609 256 128 1 68 323 28 282 5.31e-86 266
Msa0354670 AT2G12480.1 49.609 256 128 1 68 323 28 282 5.83e-86 266
Msa0354670 AT2G12480.2 49.609 256 128 1 68 323 28 282 5.93e-86 266
Msa0354670 AT2G12480.3 49.609 256 128 1 68 323 28 282 1.09e-85 266
Msa0354670 AT2G24010.2 48.201 278 125 4 66 326 25 300 2.71e-85 265
Msa0354670 AT5G42240.1 49.237 262 126 3 68 323 29 289 4.97e-85 265
Msa0354670 AT2G24010.4 48.529 272 121 4 72 326 2 271 2.34e-84 259
Msa0354670 AT1G43780.1 48.473 262 127 4 69 323 35 295 1.02e-82 259
Msa0354670 AT5G42230.1 45.421 273 142 3 57 323 14 285 2.65e-81 255
Msa0354670 AT5G42230.2 45.421 273 142 3 57 323 14 285 2.65e-81 255
Msa0354670 AT1G28110.1 47.761 268 129 4 70 330 30 293 7.20e-80 251
Msa0354670 AT1G28110.2 47.761 268 129 4 70 330 30 293 7.20e-80 251
Msa0354670 AT3G17180.2 50.195 257 124 4 70 323 37 292 7.31e-80 250
Msa0354670 AT3G17180.1 49.064 267 131 5 60 323 28 292 2.08e-79 250
Msa0354670 AT2G33530.1 47.388 268 130 4 70 330 32 295 6.17e-79 248
Msa0354670 AT2G24010.3 44.444 297 121 5 72 326 2 296 8.75e-78 246
Msa0354670 AT5G23210.5 53.623 207 93 3 120 324 5 210 2.14e-68 219
Msa0354670 AT5G23210.4 53.695 203 91 3 124 324 8 209 1.63e-67 216
Msa0354670 AT5G23210.2 53.695 203 91 3 124 324 8 209 3.97e-67 216
Msa0354670 AT4G12910.2 40.824 267 150 4 61 321 24 288 1.87e-62 206
Msa0354670 AT4G12910.1 40.824 267 150 4 61 321 24 288 5.17e-62 206
Msa0354670 AT3G25420.1 39.147 258 147 5 72 321 30 285 1.77e-56 191
Msa0354670 AT2G22990.4 32.609 276 175 5 64 331 15 287 3.44e-43 154
Msa0354670 AT2G22990.3 32.609 276 175 5 64 331 15 287 3.99e-43 155
Msa0354670 AT2G22990.1 32.609 276 175 5 64 331 15 287 5.00e-43 154
Msa0354670 AT2G22920.4 33.955 268 167 6 64 323 17 282 2.11e-42 149
Msa0354670 AT2G22920.1 33.955 268 167 6 64 323 17 282 1.86e-41 149
Msa0354670 AT2G22920.2 33.955 268 167 6 64 323 17 282 3.00e-41 149
Msa0354670 AT2G22970.2 34.231 260 160 7 72 323 25 281 6.10e-40 143
Msa0354670 AT1G73290.2 31.273 275 177 6 67 331 27 299 7.39e-40 142
Msa0354670 AT2G22970.4 34.231 260 160 7 72 323 25 281 4.73e-39 143
Msa0354670 AT2G22970.1 34.231 260 160 7 72 323 25 281 6.37e-39 143
Msa0354670 AT2G22970.3 34.231 260 160 7 72 323 25 281 8.24e-39 143
Msa0354670 AT1G73290.3 31.086 267 176 5 67 327 27 291 2.41e-38 140
Msa0354670 AT3G45010.1 35.470 234 140 7 77 307 92 317 3.08e-38 142
Msa0354670 AT1G73290.1 31.086 267 176 5 67 327 27 291 5.76e-38 140
Msa0354670 AT1G73270.1 31.159 276 177 7 64 331 25 295 1.26e-37 140
Msa0354670 AT1G73270.2 31.159 276 177 7 64 331 25 295 1.33e-37 139
Msa0354670 AT2G23000.1 30.909 275 177 7 67 331 20 291 1.75e-37 139
Msa0354670 AT2G23000.2 30.909 275 177 7 67 331 20 291 1.75e-37 139
Msa0354670 AT2G22990.5 31.159 276 170 6 64 331 15 278 5.75e-37 137
Msa0354670 AT2G22980.2 32.090 268 164 8 72 331 26 283 2.33e-36 135
Msa0354670 AT1G15000.1 39.894 188 105 4 79 263 29 211 2.45e-36 136
Msa0354670 AT1G33540.1 29.304 273 176 6 64 321 21 291 3.20e-36 136
Msa0354670 AT2G22980.1 32.090 268 164 8 72 331 26 283 3.54e-36 135
Msa0354670 AT2G22980.4 32.090 268 164 8 72 331 26 283 3.83e-36 135
Msa0354670 AT3G12240.1 34.252 254 157 7 63 308 19 270 3.89e-36 135
Msa0354670 AT5G22980.1 33.624 229 145 6 79 306 91 313 4.37e-36 136
Msa0354670 AT3G12203.1 32.028 281 178 7 51 323 12 287 5.42e-36 135
Msa0354670 AT1G73280.2 32.692 260 165 6 72 323 33 290 7.54e-36 134
Msa0354670 AT3G12220.1 34.066 273 167 8 67 331 22 289 8.15e-36 134
Msa0354670 AT1G73300.1 30.943 265 173 6 67 323 28 290 1.80e-35 134
Msa0354670 AT1G73300.2 30.943 265 173 6 67 323 28 290 1.80e-35 134
Msa0354670 AT1G73280.1 32.692 260 165 6 72 323 33 290 2.37e-35 133
Msa0354670 AT3G12203.3 32.075 265 170 6 67 323 4 266 3.56e-35 132
Msa0354670 AT3G10410.1 34.694 245 143 9 77 312 90 326 4.59e-35 134
Msa0354670 AT2G23010.2 30.153 262 172 6 57 310 10 268 4.96e-35 132
Msa0354670 AT2G22980.3 32.222 270 163 10 72 331 26 285 5.09e-35 131
Msa0354670 AT3G10450.4 30.337 267 176 6 67 325 24 288 5.26e-35 132
Msa0354670 AT2G23010.1 30.153 262 172 6 57 310 10 268 5.38e-35 132
Msa0354670 AT3G12230.1 35.270 241 146 7 67 299 22 260 8.43e-35 132
Msa0354670 AT5G09640.1 31.429 245 158 6 64 300 19 261 9.61e-35 132
Msa0354670 AT3G10450.1 30.337 267 176 6 67 325 24 288 1.01e-34 132
Msa0354670 AT5G36180.1 30.712 267 171 8 67 323 28 290 1.12e-34 132
Msa0354670 AT1G33540.2 29.150 247 159 5 89 321 4 248 3.91e-34 130
Msa0354670 AT3G12220.2 34.400 250 152 7 89 331 15 259 8.23e-34 129
Msa0354670 AT3G10450.3 30.738 244 160 5 89 325 4 245 3.47e-33 126
Msa0354670 AT3G10450.2 30.738 244 160 5 89 325 4 245 3.89e-33 127
Msa0354670 AT3G12220.3 36.697 218 130 6 67 278 22 237 6.45e-33 125
Msa0354670 AT2G24000.2 58.065 93 38 1 66 157 25 117 1.72e-32 125
Msa0354670 AT2G24000.2 38.235 102 62 1 222 323 119 219 1.02e-13 72.0
Msa0354670 AT1G73310.2 30.952 252 164 6 67 310 28 277 1.88e-32 125
Msa0354670 AT1G73310.1 30.952 252 164 6 67 310 28 277 3.49e-32 125
Msa0354670 AT3G12203.2 32.468 231 147 5 100 323 1 229 9.84e-32 122
Msa0354670 AT5G22960.1 34.682 173 88 6 77 247 25 174 6.22e-24 97.4
Msa0354670 AT2G22990.6 32.184 174 114 2 160 331 2 173 4.97e-23 97.8
Msa0354670 AT2G22990.2 32.184 174 114 2 160 331 2 173 5.55e-23 97.8
Msa0354670 AT1G73280.4 30.337 178 121 2 148 323 12 188 2.54e-19 87.8
Msa0354670 AT5G36180.4 29.444 180 120 4 148 323 12 188 3.40e-19 87.4
Msa0354670 AT5G36180.5 29.444 180 120 4 148 323 12 188 4.69e-19 87.0
Msa0354670 AT5G36180.3 29.444 180 120 4 148 323 12 188 4.69e-19 87.0
Msa0354670 AT5G36180.2 29.444 180 120 4 148 323 12 188 5.83e-19 86.7
Msa0354670 AT2G22980.5 29.310 174 112 4 160 331 2 166 1.21e-17 82.4
Msa0354670 AT1G73310.3 29.697 165 113 2 148 310 12 175 2.13e-17 82.0
Msa0354670 AT1G73280.3 29.878 164 112 2 162 323 1 163 4.83e-16 78.2
Msa0354670 AT2G27920.1 28.249 177 118 4 84 257 33 203 6.62e-16 78.6

Find 55 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACATTGCCTCTTCTTCTT+TGG 0.241096 3_1:+26652957 Msa0354670:CDS
CCTCTTCTTCTTTGGCTCAA+TGG 0.255465 3_1:+26652965 Msa0354670:CDS
AGATGAACCAATGAAGAATT+TGG 0.259071 3_1:-26652623 None:intergenic
CTCTACTTTGTTTGCTTCCA+TGG 0.284619 3_1:-26652682 None:intergenic
TATCAACCTCAAAGGAATTA+TGG 0.285850 3_1:+26656507 Msa0354670:CDS
TATTCTCTACCATAATAAAA+AGG 0.316186 3_1:+26656471 Msa0354670:CDS
TTGTTCCTTGAGTCCCCAGC+TGG 0.329304 3_1:+26656265 Msa0354670:CDS
TCTCATTGTCACTCTCTTTG+TGG 0.333499 3_1:+26652652 Msa0354670:CDS
AAATCTCTATTCTTATATTC+AGG 0.337407 3_1:-26656394 None:intergenic
AATAGAGATTTCTACATTGC+TGG 0.337904 3_1:+26656406 Msa0354670:CDS
GAGCAAACCAAATTCTTCAT+TGG 0.359214 3_1:+26652616 Msa0354670:CDS
AATAACTATTCATGGAACTA+TGG 0.364693 3_1:+26655926 Msa0354670:CDS
AATGTGAAATTCTCTCAATA+TGG 0.394122 3_1:+26652860 Msa0354670:CDS
CACATACCATAATTCCTTTG+AGG 0.398233 3_1:-26656513 None:intergenic
ACTGCACTCAGTAGTTTGAT+TGG 0.398551 3_1:-26659234 None:intergenic
TATTGAGAGAATTTCACATT+TGG 0.420138 3_1:-26652857 None:intergenic
GACAAGATTGAGAAGCTACC+AGG 0.444816 3_1:+26652830 Msa0354670:CDS
CCCTTCCGTGTGAAGAGTAA+TGG 0.445262 3_1:+26655887 Msa0354670:CDS
CCTTCCGTGTGAAGAGTAAT+GGG 0.448180 3_1:+26655888 Msa0354670:CDS
AGCTGTTCTTCTATCTCCAT+TGG 0.449883 3_1:-26656329 None:intergenic
GGATGCTCATCTCTTGCCTA+TGG 0.462686 3_1:+26655845 Msa0354670:CDS
GAATATTGTGTGCAAGTTGA+GGG 0.463337 3_1:-26656453 None:intergenic
TATGAATATCCTACCCCAGC+TGG 0.466534 3_1:-26656280 None:intergenic
AACTTCTTGCATTGCTCCAT+AGG 0.478248 3_1:-26655861 None:intergenic
CTCTTTGTGGCTGAAATCCA+TGG 0.486471 3_1:+26652665 Msa0354670:CDS
CCCATTACTCTTCACACGGA+AGG 0.500696 3_1:-26655888 None:intergenic
TGTTCCTTGAGTCCCCAGCT+GGG 0.502648 3_1:+26656266 Msa0354670:CDS
CTTGAGTCCCCAGCTGGGGT+AGG 0.518621 3_1:+26656271 Msa0354670:CDS
TAGGCAAGAGATGAGCATCC+AGG 0.518987 3_1:-26655842 None:intergenic
CATAGATGTTGTATATATCA+AGG 0.519966 3_1:-26659292 None:intergenic
TATGGAGCAATGCAAGAAGT+TGG 0.522491 3_1:+26655863 Msa0354670:CDS
GTGAAATTCTCTCAATATGG+AGG 0.524656 3_1:+26652863 Msa0354670:CDS
AAAGAGAGTGACAATGAGAA+TGG 0.525017 3_1:-26652648 None:intergenic
ATGAATATCCTACCCCAGCT+GGG 0.526810 3_1:-26656279 None:intergenic
AATTTCACATTTGGTTGCCC+TGG 0.527499 3_1:-26652848 None:intergenic
CTACCCCAGCTGGGGACTCA+AGG 0.535108 3_1:-26656270 None:intergenic
CTTCTTCTTTGGCTCAATGG+AGG 0.537092 3_1:+26652968 Msa0354670:CDS
AGAATATTGTGTGCAAGTTG+AGG 0.547975 3_1:-26656454 None:intergenic
CCATTACTCTTCACACGGAA+GGG 0.549561 3_1:-26655887 None:intergenic
ATTGCTGGAGAAAGTTATGC+TGG 0.550938 3_1:+26656421 Msa0354670:CDS
CCATTGAGCCAAAGAAGAAG+AGG 0.565040 3_1:-26652965 None:intergenic
GAATATTGTGCTTGATGCAA+TGG 0.567607 3_1:+26652778 Msa0354670:CDS
GCAATGGTTCATTCTCAAGA+TGG 0.570538 3_1:+26652794 Msa0354670:CDS
AACTACTGAGTGCAGTGAAG+CGG 0.575352 3_1:+26659241 Msa0354670:CDS
CCTTCTTCGGACGGTTAGTG+AGG 0.576121 3_1:-26659337 None:intergenic
GTTCCTTGAGTCCCCAGCTG+GGG 0.580944 3_1:+26656267 Msa0354670:CDS
TCATCTGATTATGACACCAA+TGG 0.596555 3_1:+26656313 Msa0354670:CDS
GTTACAGTGGACAAAATAGC+AGG 0.604232 3_1:+26652890 Msa0354670:CDS
AGGACAATTATCAACCTCAA+AGG 0.606041 3_1:+26656499 Msa0354670:CDS
AGGTTGTGATTAGTGCAGAC+TGG 0.606106 3_1:-26659317 None:intergenic
TGAAATTCTCTCAATATGGA+GGG 0.612482 3_1:+26652864 Msa0354670:CDS
ACAAGATTGAGAAGCTACCA+GGG 0.626619 3_1:+26652831 Msa0354670:CDS
TGAATATCCTACCCCAGCTG+GGG 0.656224 3_1:-26656278 None:intergenic
ATATGGAGGGTATGTTACAG+TGG 0.667375 3_1:+26652877 Msa0354670:CDS
AATGACGACACAGATGAGCA+AGG 0.677911 3_1:+26659125 Msa0354670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAAAATTATTTAATTTT+GGG - chr3_1:26653982-26654001 None:intergenic 0.0%
!!! TTTAAAAAATTATTTAATTT+TGG - chr3_1:26653983-26654002 None:intergenic 0.0%
!! TAAATATAAATTAATATTTA+GGG - chr3_1:26657536-26657555 None:intergenic 0.0%
!! ATAAATATAAATTAATATTT+AGG - chr3_1:26657537-26657556 None:intergenic 0.0%
!!! AAAATTAATTTTAATTATAA+TGG + chr3_1:26658759-26658778 Msa0354670:intron 0.0%
!! AGTTAAATATTAAGATAAAT+GGG - chr3_1:26653287-26653306 None:intergenic 10.0%
!! AAGTTAAATATTAAGATAAA+TGG - chr3_1:26653288-26653307 None:intergenic 10.0%
!! ATTTATCTTAATATTTAACT+TGG + chr3_1:26653287-26653306 Msa0354670:intron 10.0%
!! ATAAATTACAAACTAAAAAT+CGG + chr3_1:26653384-26653403 Msa0354670:intron 10.0%
!! GTAAATACTTATATATAATT+TGG - chr3_1:26654054-26654073 None:intergenic 10.0%
!!! TTTAAACAAAAATAACTTTT+GGG - chr3_1:26654745-26654764 None:intergenic 10.0%
!!! ATTTAAACAAAAATAACTTT+TGG - chr3_1:26654746-26654765 None:intergenic 10.0%
!! AATATTGAGTAATATATTTA+GGG - chr3_1:26654937-26654956 None:intergenic 10.0%
!! AAATATTGAGTAATATATTT+AGG - chr3_1:26654938-26654957 None:intergenic 10.0%
!! GACTATAAATTAAAAATAAA+GGG - chr3_1:26655299-26655318 None:intergenic 10.0%
!! TGACTATAAATTAAAAATAA+AGG - chr3_1:26655300-26655319 None:intergenic 10.0%
!! TATATCTTATATTCATATTT+CGG - chr3_1:26655523-26655542 None:intergenic 10.0%
!!! CATTTTTTTTTTAACAAAAA+TGG + chr3_1:26657013-26657032 Msa0354670:intron 10.0%
!! TATAATATAATGAATGTTAA+AGG + chr3_1:26657895-26657914 Msa0354670:intron 10.0%
!! ATAATATAATGAATGTTAAA+GGG + chr3_1:26657896-26657915 Msa0354670:intron 10.0%
!! AAATTTAGTTAAACTAATAA+GGG + chr3_1:26657928-26657947 Msa0354670:intron 10.0%
!!! TTTCTTATTTCATTTTTAAT+TGG + chr3_1:26658680-26658699 Msa0354670:intron 10.0%
!!! TTCTTATTTCATTTTTAATT+GGG + chr3_1:26658681-26658700 Msa0354670:intron 10.0%
!! ATAGTTGAATAATAATAATA+AGG + chr3_1:26658867-26658886 Msa0354670:intron 10.0%
!!! TTTTGAATTTATATTGTACT+TGG - chr3_1:26652729-26652748 None:intergenic 15.0%
!! GTTAAATATTAAGATAAATG+GGG - chr3_1:26653286-26653305 None:intergenic 15.0%
!! TTGTGACAAATTATTTATAT+GGG - chr3_1:26653772-26653791 None:intergenic 15.0%
!! TTTGTGACAAATTATTTATA+TGG - chr3_1:26653773-26653792 None:intergenic 15.0%
!!! AGTTTAATTTTTTTGTTTAG+AGG + chr3_1:26653798-26653817 Msa0354670:intron 15.0%
!! ATAAAGTAAAAACAGAAAAT+TGG + chr3_1:26654022-26654041 Msa0354670:intron 15.0%
!! ATACTTATATATAATTTGGT+TGG - chr3_1:26654050-26654069 None:intergenic 15.0%
!!! AATATTTTCCTTCATTTATT+TGG + chr3_1:26654584-26654603 Msa0354670:intron 15.0%
!!! ACTCTTTTTTTTTTTTTTGA+GGG - chr3_1:26654719-26654738 None:intergenic 15.0%
!!! AACTCTTTTTTTTTTTTTTG+AGG - chr3_1:26654720-26654739 None:intergenic 15.0%
!! AAAGAAATTATTACCAAAAA+AGG - chr3_1:26654887-26654906 None:intergenic 15.0%
!! ATATTGAGTAATATATTTAG+GGG - chr3_1:26654936-26654955 None:intergenic 15.0%
!!! TTTTTTATGCTATCAAAAAT+GGG - chr3_1:26655564-26655583 None:intergenic 15.0%
!!! AATATTTTATACAGTAGTAT+AGG + chr3_1:26655611-26655630 Msa0354670:intron 15.0%
!!! ATGAAATCATATAGTTTTTT+AGG + chr3_1:26655727-26655746 Msa0354670:intron 15.0%
!! GAAATAAAAAATATAAAGGT+GGG - chr3_1:26656923-26656942 None:intergenic 15.0%
!! AGTGGAAATAAAAAATATAA+AGG - chr3_1:26656927-26656946 None:intergenic 15.0%
!!! TTTTTCTTTTGTTATAAGAT+TGG + chr3_1:26657040-26657059 Msa0354670:intron 15.0%
!!! TTTTCTTTTGTTATAAGATT+GGG + chr3_1:26657041-26657060 Msa0354670:intron 15.0%
!! TAAATGTAAAATGACATAAA+AGG + chr3_1:26657412-26657431 Msa0354670:intron 15.0%
!!! ACTACTTTTTATTTTAAAGA+AGG - chr3_1:26657673-26657692 None:intergenic 15.0%
!!! GCTTTACTTTTTTTTTTTTT+GGG - chr3_1:26657701-26657720 None:intergenic 15.0%
!!! TACAATTGTTATGTTTTTTT+TGG - chr3_1:26657779-26657798 None:intergenic 15.0%
!! GAAATTTAGTTAAACTAATA+AGG + chr3_1:26657927-26657946 Msa0354670:intron 15.0%
!! AATAAGATATTAAATGACTA+AGG - chr3_1:26658308-26658327 None:intergenic 15.0%
!! TTATATTATATGCATAGATT+GGG + chr3_1:26659090-26659109 Msa0354670:intron 15.0%
!! ATAATATAAAATGCTTAGAT+GGG + chr3_1:26660263-26660282 Msa0354670:intron 15.0%
!!! TGCTTTTTACTATTATTTTG+TGG + chr3_1:26652916-26652935 Msa0354670:CDS 20.0%
!!! AATTTAGGATAGTTTATGTA+AGG - chr3_1:26653077-26653096 None:intergenic 20.0%
!! CCTTGATATTACTAAAATTT+AGG - chr3_1:26653132-26653151 None:intergenic 20.0%
!!! CCTAAATTTTAGTAATATCA+AGG + chr3_1:26653129-26653148 Msa0354670:intron 20.0%
!!! TACAATGATTAAACTTTTTG+AGG - chr3_1:26653177-26653196 None:intergenic 20.0%
!! TAATTATGTCCTTAATTGTT+AGG - chr3_1:26653242-26653261 None:intergenic 20.0%
!! AAAAGTAGTATTACTAACTT+TGG - chr3_1:26653927-26653946 None:intergenic 20.0%
!! AGTTTAGATAATGTCTTTAT+AGG + chr3_1:26654093-26654112 Msa0354670:intron 20.0%
!! GATGAAAGATAATATTATGT+TGG - chr3_1:26654133-26654152 None:intergenic 20.0%
!! AATGAAGGAAAATATTTGAT+TGG - chr3_1:26654580-26654599 None:intergenic 20.0%
!! AATATATGAGAAATACTAAC+CGG + chr3_1:26654763-26654782 Msa0354670:intron 20.0%
!! CTGATTAAGAATACTAAAAA+AGG + chr3_1:26654797-26654816 Msa0354670:intron 20.0%
!!! CTTTTTTATGCTATCAAAAA+TGG - chr3_1:26655565-26655584 None:intergenic 20.0%
!!! ATTTTTCATTTCTCTTTCAA+AGG + chr3_1:26655818-26655837 Msa0354670:intron 20.0%
!!! TGAATAGTTATTTTTGTGAA+GGG - chr3_1:26655918-26655937 None:intergenic 20.0%
!!! ATGAATAGTTATTTTTGTGA+AGG - chr3_1:26655919-26655938 None:intergenic 20.0%
!! TTCACAAAAATAACTATTCA+TGG + chr3_1:26655918-26655937 Msa0354670:CDS 20.0%
!! AAAAAGAATTGATCAATTTG+AGG - chr3_1:26655968-26655987 None:intergenic 20.0%
!!! TTTTCCCTAAATAGATAAAA+TGG + chr3_1:26656090-26656109 Msa0354670:intron 20.0%
!!! ATTGCCATTTTATCTATTTA+GGG - chr3_1:26656097-26656116 None:intergenic 20.0%
!!! TATTGCCATTTTATCTATTT+AGG - chr3_1:26656098-26656117 None:intergenic 20.0%
!!! ACTATGTTTTTTTAGTGAAT+TGG + chr3_1:26656359-26656378 Msa0354670:CDS 20.0%
!! AAATCTCTATTCTTATATTC+AGG - chr3_1:26656397-26656416 None:intergenic 20.0%
!! TATTCTCTACCATAATAAAA+AGG + chr3_1:26656471-26656490 Msa0354670:CDS 20.0%
!!! TCTTCTATTTGTTATCAAAT+TGG + chr3_1:26656547-26656566 Msa0354670:intron 20.0%
!! GGAAATAAAAAATATAAAGG+TGG - chr3_1:26656924-26656943 None:intergenic 20.0%
!! GTTTATTAAATCTTGAATCA+TGG + chr3_1:26657172-26657191 Msa0354670:intron 20.0%
!!! ATTGGCTATTTTTTTGTTTT+AGG + chr3_1:26657221-26657240 Msa0354670:intron 20.0%
!!! CGCTTTACTTTTTTTTTTTT+TGG - chr3_1:26657702-26657721 None:intergenic 20.0%
!! TAAACTAATAAGGGTAAAAA+TGG + chr3_1:26657937-26657956 Msa0354670:intron 20.0%
!! TTAAAAAATCTCCATGATAT+AGG - chr3_1:26658169-26658188 None:intergenic 20.0%
!! TTAAAAAGTGACACTTAAAA+AGG - chr3_1:26658211-26658230 None:intergenic 20.0%
!!! TGTTGATGTTTTTTCTTTTT+TGG + chr3_1:26658643-26658662 Msa0354670:intron 20.0%
!!! GTTGATGTTTTTTCTTTTTT+GGG + chr3_1:26658644-26658663 Msa0354670:intron 20.0%
!! ATGTATCTAAACACAAAAAT+TGG - chr3_1:26658840-26658859 None:intergenic 20.0%
!! ACTCAAATAAAATGTATGAA+TGG + chr3_1:26658996-26659015 Msa0354670:intron 20.0%
!! GTTATATTATATGCATAGAT+TGG + chr3_1:26659089-26659108 Msa0354670:intron 20.0%
!!! TGATTTTTCTTAAAGCAATT+AGG + chr3_1:26659401-26659420 Msa0354670:intron 20.0%
!!! GATTTTTCTTAAAGCAATTA+GGG + chr3_1:26659402-26659421 Msa0354670:intron 20.0%
!!! TTTAATTTCCAATTCTTGAA+GGG - chr3_1:26660020-26660039 None:intergenic 20.0%
!!! ATTTAATTTCCAATTCTTGA+AGG - chr3_1:26660021-26660040 None:intergenic 20.0%
!! GATAATATAAAATGCTTAGA+TGG + chr3_1:26660262-26660281 Msa0354670:intron 20.0%
!! AGAAACATACACATAATTAT+AGG - chr3_1:26660736-26660755 None:intergenic 20.0%
! TATTGAGAGAATTTCACATT+TGG - chr3_1:26652860-26652879 None:intergenic 25.0%
! AATGTGAAATTCTCTCAATA+TGG + chr3_1:26652860-26652879 Msa0354670:CDS 25.0%
! TTAAGTCTTCCTAACAATTA+AGG + chr3_1:26653230-26653249 Msa0354670:intron 25.0%
! AATTAATGATCGTTTGTGAT+TGG - chr3_1:26653360-26653379 None:intergenic 25.0%
!! AAGTCCTAAAATTCTAGTTA+AGG + chr3_1:26653821-26653840 Msa0354670:intron 25.0%
!! TGTACCTTAACTAGAATTTT+AGG - chr3_1:26653828-26653847 None:intergenic 25.0%
! TATTATCTTTCATCTTCTAG+TGG + chr3_1:26654139-26654158 Msa0354670:intron 25.0%
!! TCTTTTATAATCACTTTGCA+TGG + chr3_1:26654165-26654184 Msa0354670:intron 25.0%
!! TATCATTTAGTTTCCTATGT+TGG + chr3_1:26654194-26654213 Msa0354670:intron 25.0%
!! ATCATTTAGTTTCCTATGTT+GGG + chr3_1:26654195-26654214 Msa0354670:intron 25.0%
!! TCAATCTCTCTTTAAGTTAT+TGG - chr3_1:26654337-26654356 None:intergenic 25.0%
!! GAAGTTTGTTTGACTATTTA+TGG - chr3_1:26654865-26654884 None:intergenic 25.0%
!! ACTCAATATTTTATACCACA+AGG + chr3_1:26655072-26655091 Msa0354670:intron 25.0%
! AAAAGAAATAAATAAGCCAC+CGG + chr3_1:26655198-26655217 Msa0354670:intron 25.0%
! ATCCCAATAAATACTTAAAC+CGG - chr3_1:26655220-26655239 None:intergenic 25.0%
!!! TTATAGTCATTTTCTGATGA+TGG + chr3_1:26655311-26655330 Msa0354670:intron 25.0%
! AATTAACATACACATGACTT+GGG - chr3_1:26655363-26655382 None:intergenic 25.0%
! TAATTAACATACACATGACT+TGG - chr3_1:26655364-26655383 None:intergenic 25.0%
! ATATAATTACATCAAGTGCA+GGG - chr3_1:26655475-26655494 None:intergenic 25.0%
! AATATAATTACATCAAGTGC+AGG - chr3_1:26655476-26655495 None:intergenic 25.0%
! TTCATATTTCGGTTGAAAAA+GGG - chr3_1:26655512-26655531 None:intergenic 25.0%
! ATTCATATTTCGGTTGAAAA+AGG - chr3_1:26655513-26655532 None:intergenic 25.0%
! ACACTATGTTATTGTAGTAA+AGG + chr3_1:26655640-26655659 Msa0354670:intron 25.0%
! AATAACTATTCATGGAACTA+TGG + chr3_1:26655926-26655945 Msa0354670:CDS 25.0%
! ACCATAATAAAAAGGCTAAT+AGG + chr3_1:26656479-26656498 Msa0354670:CDS 25.0%
!!! TCCTATTAGCCTTTTTATTA+TGG - chr3_1:26656483-26656502 None:intergenic 25.0%
! TGTCCATGATTAATGTTTAA+GGG - chr3_1:26656624-26656643 None:intergenic 25.0%
! AAAATTACAGCCAATGTAAT+AGG + chr3_1:26656654-26656673 Msa0354670:intron 25.0%
! TTTGAAAAAGCCTATTACAT+TGG - chr3_1:26656667-26656686 None:intergenic 25.0%
! ATTTCTCAATTACATCATGA+TGG + chr3_1:26656686-26656705 Msa0354670:intron 25.0%
!! TGATGGTGAAAAGTAAAATT+AGG + chr3_1:26656703-26656722 Msa0354670:intron 25.0%
! ATTGGGTTTCCAAATTTATT+TGG + chr3_1:26657058-26657077 Msa0354670:intron 25.0%
! TTACTATCGCTATATTGTTA+CGG - chr3_1:26657741-26657760 None:intergenic 25.0%
! AACATAAAAGTAAACGTAAC+TGG + chr3_1:26657801-26657820 Msa0354670:intron 25.0%
! TCTCCACAATAAATAACTAA+GGG + chr3_1:26658341-26658360 Msa0354670:intron 25.0%
! TTACCCTTAGTTATTTATTG+TGG - chr3_1:26658347-26658366 None:intergenic 25.0%
! TAAATAACTAAGGGTAATGT+TGG + chr3_1:26658350-26658369 Msa0354670:intron 25.0%
! TTTGAAAGTGACAGTTAAAT+AGG + chr3_1:26658401-26658420 Msa0354670:intron 25.0%
! TTCAAAAGTGACACTTAAAA+AGG + chr3_1:26658437-26658456 Msa0354670:intron 25.0%
! CATTATAGATAGATATGTCA+AGG + chr3_1:26658546-26658565 Msa0354670:intron 25.0%
!!! TAGTTGATGATGTTTTGTTT+TGG + chr3_1:26658612-26658631 Msa0354670:intron 25.0%
! TATAATGTAATTCTGTGCTT+TGG - chr3_1:26658907-26658926 None:intergenic 25.0%
! ATGTGAATGAAACAATCTAA+TGG + chr3_1:26659040-26659059 Msa0354670:intron 25.0%
! CATAGATGTTGTATATATCA+AGG - chr3_1:26659295-26659314 None:intergenic 25.0%
!! NNNNNNNGTTTGGAACTCAA+AGG + chr3_1:26659602-26659621 Msa0354670:intron 25.0%
!!! CCAAGAGATTTTAATGTTTT+GGG - chr3_1:26659641-26659660 None:intergenic 25.0%
!!! TCCAAGAGATTTTAATGTTT+TGG - chr3_1:26659642-26659661 None:intergenic 25.0%
! AATCTATGAATGTAAGAATC+TGG + chr3_1:26659661-26659680 Msa0354670:intron 25.0%
! ATCAAGATTAGAAATGAACA+AGG - chr3_1:26660245-26660264 None:intergenic 25.0%
! AAATAAAAGACGAATAAGCA+TGG - chr3_1:26660559-26660578 None:intergenic 25.0%
AGATGAACCAATGAAGAATT+TGG - chr3_1:26652626-26652645 None:intergenic 30.0%
TGAAATTCTCTCAATATGGA+GGG + chr3_1:26652864-26652883 Msa0354670:CDS 30.0%
CCATTGAGCTACTAAAATTT+AGG - chr3_1:26653092-26653111 None:intergenic 30.0%
!! CCTAAATTTTAGTAGCTCAA+TGG + chr3_1:26653089-26653108 Msa0354670:intron 30.0%
GTTGAAACTAACTGATTGAA+AGG - chr3_1:26653622-26653641 None:intergenic 30.0%
!!! TGTGAACTCACATTCTTTTT+TGG + chr3_1:26653692-26653711 Msa0354670:intron 30.0%
TCTAGTTAAGGTACATTCTA+TGG + chr3_1:26653833-26653852 Msa0354670:intron 30.0%
CTAGTTAAGGTACATTCTAT+GGG + chr3_1:26653834-26653853 Msa0354670:intron 30.0%
AAGTGTTACATGCACATATA+TGG + chr3_1:26654221-26654240 Msa0354670:intron 30.0%
GCTTAGAAGATTATTTGTAG+AGG + chr3_1:26654261-26654280 Msa0354670:intron 30.0%
ACACTTAAGAAAAGGTTGAA+AGG - chr3_1:26654524-26654543 None:intergenic 30.0%
GAACACAAACACTTAAGAAA+AGG - chr3_1:26654532-26654551 None:intergenic 30.0%
!! TCCTTCATTTATTTGGTGTA+AGG + chr3_1:26654591-26654610 Msa0354670:intron 30.0%
!! CCTTCATTTATTTGGTGTAA+GGG + chr3_1:26654592-26654611 Msa0354670:intron 30.0%
!!! GTCAAACAAACTTCCTTTTT+TGG + chr3_1:26654871-26654890 Msa0354670:intron 30.0%
CAAATTCGCTAAAAACAAAG+AGG + chr3_1:26655033-26655052 Msa0354670:intron 30.0%
!! CACCGGTTTAAGTATTTATT+GGG + chr3_1:26655215-26655234 Msa0354670:intron 30.0%
CATGTGTATGTTAATTAAGC+TGG + chr3_1:26655367-26655386 Msa0354670:intron 30.0%
!!! CGCATCTGTTCTTTTTTTTT+TGG - chr3_1:26656016-26656035 None:intergenic 30.0%
AATAGAGATTTCTACATTGC+TGG + chr3_1:26656406-26656425 Msa0354670:CDS 30.0%
TATCAACCTCAAAGGAATTA+TGG + chr3_1:26656507-26656526 Msa0354670:CDS 30.0%
ATGCCCTTAAACATTAATCA+TGG + chr3_1:26656618-26656637 Msa0354670:intron 30.0%
GTGTCCATGATTAATGTTTA+AGG - chr3_1:26656625-26656644 None:intergenic 30.0%
AATGAGCTAAAAAAAACCGT+CGG - chr3_1:26656801-26656820 None:intergenic 30.0%
TTTCAGAGACTACTAATAGA+TGG + chr3_1:26656826-26656845 Msa0354670:intron 30.0%
GTGATGTCACATCATATTTA+TGG + chr3_1:26656853-26656872 Msa0354670:intron 30.0%
TTTCCAAATTTATTTGGTCC+AGG + chr3_1:26657064-26657083 Msa0354670:intron 30.0%
AATCCTGGACCAAATAAATT+TGG - chr3_1:26657070-26657089 None:intergenic 30.0%
AAATTTATTTGGTCCAGGAT+TGG + chr3_1:26657069-26657088 Msa0354670:intron 30.0%
!! ATGAAACAAAGTTTGTTACG+TGG + chr3_1:26657108-26657127 Msa0354670:intron 30.0%
!!! TTTTGTTTTAGGTGCTAGTA+TGG + chr3_1:26657232-26657251 Msa0354670:intron 30.0%
! GATAAGCTATTTGAAGTGTT+TGG + chr3_1:26657365-26657384 Msa0354670:intron 30.0%
AAAAATAGCTTATAAGCTCG+TGG + chr3_1:26658017-26658036 Msa0354670:intron 30.0%
AAAGAGCTTATAGCTTATAG+CGG - chr3_1:26658125-26658144 None:intergenic 30.0%
! TAAGCTATAAGCTCTTTTCA+TGG + chr3_1:26658128-26658147 Msa0354670:intron 30.0%
AAGTGACACTTAAAAAGGAA+CGG - chr3_1:26658442-26658461 None:intergenic 30.0%
GTAACATTTATTGAGTGTCT+TGG - chr3_1:26658247-26658266 None:intergenic 30.0%
CTCTCCACAATAAATAACTA+AGG + chr3_1:26658340-26658359 Msa0354670:intron 30.0%
AAGTGACACTTAAAAAGGAA+CGG + chr3_1:26658442-26658461 Msa0354670:intron 30.0%
GAGTAACAACTAACATTGAA+TGG + chr3_1:26658468-26658487 Msa0354670:intron 30.0%
AACATTGAATGGTCTCTATA+TGG + chr3_1:26658479-26658498 Msa0354670:intron 30.0%
TCTATCTATAATGTCTAACC+AGG - chr3_1:26658539-26658558 None:intergenic 30.0%
ATAATAATAAGGCAGCAGAT+TGG + chr3_1:26658878-26658897 Msa0354670:intron 30.0%
GATTCATATTTCCTTTCAAG+TGG + chr3_1:26659369-26659388 Msa0354670:intron 30.0%
TTTCTTAAAGCAATTAGGGT+CGG + chr3_1:26659406-26659425 Msa0354670:intron 30.0%
!! GATTTTAATGTTTTGGGTAG+AGG - chr3_1:26659635-26659654 None:intergenic 30.0%
CCCAAAACATTAAAATCTCT+TGG + chr3_1:26659638-26659657 Msa0354670:intron 30.0%
!! TTCTTAGAAGCATCACAATA+TGG + chr3_1:26659873-26659892 Msa0354670:intron 30.0%
!! TCTTAGAAGCATCACAATAT+GGG + chr3_1:26659874-26659893 Msa0354670:intron 30.0%
ACCATAAAATGAATGAGGTT+CGG - chr3_1:26659944-26659963 None:intergenic 30.0%
!! ATGGTTTTCCTGTTAGTTTA+CGG + chr3_1:26660071-26660090 Msa0354670:intron 30.0%
GTCAAAGAAGGAAAATTCAA+GGG - chr3_1:26660320-26660339 None:intergenic 30.0%
TGTCAAAGAAGGAAAATTCA+AGG - chr3_1:26660321-26660340 None:intergenic 30.0%
CAACTTAATCTTGTCAAAGA+AGG - chr3_1:26660332-26660351 None:intergenic 30.0%
! ATTAAGTTGTTGCCAAAAGA+GGG + chr3_1:26660343-26660362 Msa0354670:intron 30.0%
!! TCATCGTTGATAATTACGAA+GGG - chr3_1:26660469-26660488 None:intergenic 30.0%
!! TTCATCGTTGATAATTACGA+AGG - chr3_1:26660470-26660489 None:intergenic 30.0%
ATTATCATAGAGACTGGAAA+TGG - chr3_1:26660667-26660686 None:intergenic 30.0%
CATAATTATAGGACAAGAAC+AGG - chr3_1:26660725-26660744 None:intergenic 30.0%
! CAATTTTCTGATATTGTAGC+TGG + chr3_1:26660756-26660775 Msa0354670:intron 30.0%
GAGCAAACCAAATTCTTCAT+TGG + chr3_1:26652616-26652635 Msa0354670:CDS 35.0%
AAAGAGAGTGACAATGAGAA+TGG - chr3_1:26652651-26652670 None:intergenic 35.0%
GAATATTGTGCTTGATGCAA+TGG + chr3_1:26652778-26652797 Msa0354670:CDS 35.0%
GTGAAATTCTCTCAATATGG+AGG + chr3_1:26652863-26652882 Msa0354670:CDS 35.0%
AAACATTGCCTCTTCTTCTT+TGG + chr3_1:26652957-26652976 Msa0354670:CDS 35.0%
GTTTCAACACAATTGCATCT+AGG + chr3_1:26653634-26653653 Msa0354670:intron 35.0%
AAGAATGTGAGTTCACAACA+AGG - chr3_1:26653689-26653708 None:intergenic 35.0%
!! TCTTTTTCTCAAGTTGTTCC+TGG - chr3_1:26653733-26653752 None:intergenic 35.0%
TTATAATCACTTTGCATGGC+TGG + chr3_1:26654169-26654188 Msa0354670:intron 35.0%
GTAACACTTAATCCCAACAT+AGG - chr3_1:26654210-26654229 None:intergenic 35.0%
ATATGGACATGTAACGACAT+AGG + chr3_1:26654238-26654257 Msa0354670:intron 35.0%
TATGGACATGTAACGACATA+GGG + chr3_1:26654239-26654258 Msa0354670:intron 35.0%
TCTTTAAGTGTAGTCTTCGA+AGG + chr3_1:26654368-26654387 Msa0354670:intron 35.0%
!! TGGTTTGGTTGTATGAGTTT+GGG + chr3_1:26654393-26654412 Msa0354670:intron 35.0%
CCCTTACACCAAATAAATGA+AGG - chr3_1:26654595-26654614 None:intergenic 35.0%
TAGTATTCTTAATCAGTGCC+CGG - chr3_1:26654793-26654812 None:intergenic 35.0%
GAGTAATATATTTAGGGGTC+CGG - chr3_1:26654931-26654950 None:intergenic 35.0%
AAGCACAGAAATGTGAAGAA+TGG + chr3_1:26655104-26655123 Msa0354670:intron 35.0%
CCAATAAATACTTAAACCGG+TGG - chr3_1:26655217-26655236 None:intergenic 35.0%
!! CCACCGGTTTAAGTATTTAT+TGG + chr3_1:26655214-26655233 Msa0354670:intron 35.0%
! TTTTCCCATTACTCTTCACA+CGG - chr3_1:26655895-26655914 None:intergenic 35.0%
TCATCTGATTATGACACCAA+TGG + chr3_1:26656313-26656332 Msa0354670:CDS 35.0%
! GAATATTGTGTGCAAGTTGA+GGG - chr3_1:26656456-26656475 None:intergenic 35.0%
AGAATATTGTGTGCAAGTTG+AGG - chr3_1:26656457-26656476 None:intergenic 35.0%
AGGACAATTATCAACCTCAA+AGG + chr3_1:26656499-26656518 Msa0354670:CDS 35.0%
CACATACCATAATTCCTTTG+AGG - chr3_1:26656516-26656535 None:intergenic 35.0%
! TTAAGGGCATAATCAACACA+TGG - chr3_1:26656608-26656627 None:intergenic 35.0%
CTAAAAAAAACCGTCGGAAA+TGG - chr3_1:26656795-26656814 None:intergenic 35.0%
! GAATTTGAGACAGCATTAAG+TGG - chr3_1:26656945-26656964 None:intergenic 35.0%
! CTTTGTTTCATCCATATGAG+TGG - chr3_1:26657099-26657118 None:intergenic 35.0%
TCCATTGTCTGTGATATCAT+TGG + chr3_1:26657203-26657222 Msa0354670:intron 35.0%
GCTCTGTTTGGTAAAAATAG+CGG + chr3_1:26657254-26657273 Msa0354670:intron 35.0%
CTGACAAAATAAGCTCTGTT+TGG - chr3_1:26658085-26658104 None:intergenic 35.0%
TCTCTATATGGTCCATAAGT+GGG + chr3_1:26658491-26658510 Msa0354670:intron 35.0%
GGAACAATCCATACTAACTA+TGG - chr3_1:26658518-26658537 None:intergenic 35.0%
! TAGTTAGTATGGATTGTTCC+TGG + chr3_1:26658518-26658537 Msa0354670:intron 35.0%
!!! GATGATGTTTTGTTTTGGTG+AGG + chr3_1:26658617-26658636 Msa0354670:intron 35.0%
! TGGGCTCAAAAAATGTGTTT+TGG + chr3_1:26658700-26658719 Msa0354670:intron 35.0%
! CAAATTTCATGCCACTTGAA+AGG - chr3_1:26659383-26659402 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr3_1:26659473-26659492 None:intergenic 35.0%
TAATTGTGCAAGGATTCACA+AGG - chr3_1:26659695-26659714 None:intergenic 35.0%
AAGTGATGTGTAATTGTGCA+AGG - chr3_1:26659705-26659724 None:intergenic 35.0%
TTCAATGACATCATTGACCT+TGG + chr3_1:26659754-26659773 Msa0354670:intron 35.0%
TCAATGACATCATTGACCTT+GGG + chr3_1:26659755-26659774 Msa0354670:intron 35.0%
CTCAAGAGTCTGGATATTTA+CGG + chr3_1:26659791-26659810 Msa0354670:intron 35.0%
CTAAGAAATGAGAGACTTTG+TGG - chr3_1:26659860-26659879 None:intergenic 35.0%
! TCCGAACCTCATTCATTTTA+TGG + chr3_1:26659940-26659959 Msa0354670:intron 35.0%
! TCATTCATTTTATGGTGCGT+GGG + chr3_1:26659948-26659967 Msa0354670:intron 35.0%
TTTGCAAAACACTGCAGATT+TGG - chr3_1:26660049-26660068 None:intergenic 35.0%
AACAAGGAAACGAGAGAAAT+TGG - chr3_1:26660229-26660248 None:intergenic 35.0%
TAAAATGCTTAGATGGGAAG+TGG + chr3_1:26660269-26660288 Msa0354670:intron 35.0%
AGAAGGAAAATTCAAGGGTA+CGG - chr3_1:26660315-26660334 None:intergenic 35.0%
! GATTAAGTTGTTGCCAAAAG+AGG + chr3_1:26660342-26660361 Msa0354670:intron 35.0%
! TGCAAACTTGCTTCAAGTAA+TGG - chr3_1:26660406-26660425 None:intergenic 35.0%
! TTCCAGTCTCTATGATAATG+AGG + chr3_1:26660668-26660687 Msa0354670:intron 35.0%
AACCTCATTATCATAGAGAC+TGG - chr3_1:26660673-26660692 None:intergenic 35.0%
TCTCATTGTCACTCTCTTTG+TGG + chr3_1:26652652-26652671 Msa0354670:CDS 40.0%
! CTCTACTTTGTTTGCTTCCA+TGG - chr3_1:26652685-26652704 None:intergenic 40.0%
GCAATGGTTCATTCTCAAGA+TGG + chr3_1:26652794-26652813 Msa0354670:CDS 40.0%
ACAAGATTGAGAAGCTACCA+GGG + chr3_1:26652831-26652850 Msa0354670:CDS 40.0%
AATTTCACATTTGGTTGCCC+TGG - chr3_1:26652851-26652870 None:intergenic 40.0%
! ATATGGAGGGTATGTTACAG+TGG + chr3_1:26652877-26652896 Msa0354670:CDS 40.0%
GTTACAGTGGACAAAATAGC+AGG + chr3_1:26652890-26652909 Msa0354670:CDS 40.0%
!! GTGGTTTGGTTGTATGAGTT+TGG + chr3_1:26654392-26654411 Msa0354670:intron 40.0%
! GGTTTGGTTGTATGAGTTTG+GGG + chr3_1:26654394-26654413 Msa0354670:intron 40.0%
AGTATTCTTAATCAGTGCCC+GGG - chr3_1:26654792-26654811 None:intergenic 40.0%
TAGTATCCTTAACCAGTGAC+CGG + chr3_1:26654909-26654928 Msa0354670:intron 40.0%
ACAGAAATGTGAAGAATGGC+AGG + chr3_1:26655108-26655127 Msa0354670:intron 40.0%
! CCTCAAGAAGCGTGAATTAT+GGG - chr3_1:26655143-26655162 None:intergenic 40.0%
! TCCTCAAGAAGCGTGAATTA+TGG - chr3_1:26655144-26655163 None:intergenic 40.0%
CATTTCTCTTTCAAAGGTCC+TGG + chr3_1:26655824-26655843 Msa0354670:intron 40.0%
AACTTCTTGCATTGCTCCAT+AGG - chr3_1:26655864-26655883 None:intergenic 40.0%
TATGGAGCAATGCAAGAAGT+TGG + chr3_1:26655863-26655882 Msa0354670:CDS 40.0%
AGCTGTTCTTCTATCTCCAT+TGG - chr3_1:26656332-26656351 None:intergenic 40.0%
ATTGCTGGAGAAAGTTATGC+TGG + chr3_1:26656421-26656440 Msa0354670:CDS 40.0%
! TTGTCTAAGACCATTTCCGA+CGG + chr3_1:26656782-26656801 Msa0354670:intron 40.0%
TGTTTCATCCATATGAGTGG+TGG - chr3_1:26657096-26657115 None:intergenic 40.0%
GCCAATGATATCACAGACAA+TGG - chr3_1:26657207-26657226 None:intergenic 40.0%
CTATAAGCTCAAACGCTACT+TGG + chr3_1:26657983-26658002 Msa0354670:intron 40.0%
ACCAAACAGAGCCTATATCA+TGG + chr3_1:26658155-26658174 Msa0354670:intron 40.0%
TCCATGATATAGGCTCTGTT+TGG - chr3_1:26658159-26658178 None:intergenic 40.0%
TGACACTTAAAAAGGAACGG+AGG - chr3_1:26658445-26658464 None:intergenic 40.0%
TGACACTTAAAAAGGAACGG+AGG + chr3_1:26658445-26658464 Msa0354670:intron 40.0%
GACACTTAAAAAGGAACGGA+GGG + chr3_1:26658446-26658465 Msa0354670:intron 40.0%
GTCTCTATATGGTCCATAAG+TGG + chr3_1:26658490-26658509 Msa0354670:intron 40.0%
ACTAACTATGGTCCCACTTA+TGG - chr3_1:26658506-26658525 None:intergenic 40.0%
AAGTGGGACCATAGTTAGTA+TGG + chr3_1:26658507-26658526 Msa0354670:intron 40.0%
ACTGCACTCAGTAGTTTGAT+TGG - chr3_1:26659237-26659256 None:intergenic 40.0%
AATCTTACCGAGACCTTCTT+CGG - chr3_1:26659353-26659372 None:intergenic 40.0%
! ACGGAGGGAGTATAAAACTA+GGG - chr3_1:26659454-26659473 None:intergenic 40.0%
! AACGGAGGGAGTATAAAACT+AGG - chr3_1:26659455-26659474 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr3_1:26659469-26659488 None:intergenic 40.0%
CGTAAATATCCAGACTCTTG+AGG - chr3_1:26659793-26659812 None:intergenic 40.0%
!! ATCACAATATGGGAGTGTCA+TGG + chr3_1:26659884-26659903 Msa0354670:intron 40.0%
!! AATATGGGAGTGTCATGGAT+TGG + chr3_1:26659889-26659908 Msa0354670:intron 40.0%
AAATGAATGAGGTTCGGAGT+GGG - chr3_1:26659938-26659957 None:intergenic 40.0%
AAAATGAATGAGGTTCGGAG+TGG - chr3_1:26659939-26659958 None:intergenic 40.0%
CACGCACCATAAAATGAATG+AGG - chr3_1:26659949-26659968 None:intergenic 40.0%
! CTCATTCATTTTATGGTGCG+TGG + chr3_1:26659947-26659966 Msa0354670:intron 40.0%
!! GCTAGAGTATTCATTGGTTC+TGG - chr3_1:26659995-26660014 None:intergenic 40.0%
! CTGCAGTGTTTTGCAAAAGA+TGG + chr3_1:26660052-26660071 Msa0354670:intron 40.0%
GATTTCGCAGATGGGAAATT+GGG + chr3_1:26660120-26660139 Msa0354670:intron 40.0%
AGGTGATGATACTGTGAATG+CGG + chr3_1:26660177-26660196 Msa0354670:intron 40.0%
TGTGAATGCGGTGATGAAAA+TGG + chr3_1:26660189-26660208 Msa0354670:intron 40.0%
ATCCTCAGTACAGAAAGTGA+AGG - chr3_1:26660373-26660392 None:intergenic 40.0%
TACTTGAAGCAAGTTTGCAG+AGG + chr3_1:26660407-26660426 Msa0354670:intron 40.0%
TGATCACATGAGTGAAGTGA+GGG + chr3_1:26660491-26660510 Msa0354670:intron 40.0%
AGAGACTGGAAATGGAGAAA+GGG - chr3_1:26660659-26660678 None:intergenic 40.0%
TAGAGACTGGAAATGGAGAA+AGG - chr3_1:26660660-26660679 None:intergenic 40.0%
CTCTTTGTGGCTGAAATCCA+TGG + chr3_1:26652665-26652684 Msa0354670:CDS 45.0%
GACAAGATTGAGAAGCTACC+AGG + chr3_1:26652830-26652849 Msa0354670:CDS 45.0%
CCATTGAGCCAAAGAAGAAG+AGG - chr3_1:26652968-26652987 None:intergenic 45.0%
! CCTCTTCTTCTTTGGCTCAA+TGG + chr3_1:26652965-26652984 Msa0354670:CDS 45.0%
! CTTCTTCTTTGGCTCAATGG+AGG + chr3_1:26652968-26652987 Msa0354670:CDS 45.0%
! TGGTTTTCACATCACAAGCC+AGG + chr3_1:26653712-26653731 Msa0354670:intron 45.0%
AAGTGTAGTCTTCGAAGGAG+TGG + chr3_1:26654373-26654392 Msa0354670:intron 45.0%
TAGTCTTCGAAGGAGTGGTT+TGG + chr3_1:26654378-26654397 Msa0354670:intron 45.0%
GTATTCTTAATCAGTGCCCG+GGG - chr3_1:26654791-26654810 None:intergenic 45.0%
GTGCTTCTCTCATAACCTTG+TGG - chr3_1:26655090-26655109 None:intergenic 45.0%
CCCATAATTCACGCTTCTTG+AGG + chr3_1:26655140-26655159 Msa0354670:intron 45.0%
TTTGTTCTTGTATGCACGCC+GGG - chr3_1:26655170-26655189 None:intergenic 45.0%
GTTTGTTCTTGTATGCACGC+CGG - chr3_1:26655171-26655190 None:intergenic 45.0%
! CATACACATGACTTGGGTTG+AGG - chr3_1:26655357-26655376 None:intergenic 45.0%
CCATTACTCTTCACACGGAA+GGG - chr3_1:26655890-26655909 None:intergenic 45.0%
CCTTCCGTGTGAAGAGTAAT+GGG + chr3_1:26655888-26655907 Msa0354670:CDS 45.0%
ATGAATATCCTACCCCAGCT+GGG - chr3_1:26656282-26656301 None:intergenic 45.0%
TATGAATATCCTACCCCAGC+TGG - chr3_1:26656283-26656302 None:intergenic 45.0%
AATGACGACACAGATGAGCA+AGG + chr3_1:26659125-26659144 Msa0354670:CDS 45.0%
AACTACTGAGTGCAGTGAAG+CGG + chr3_1:26659241-26659260 Msa0354670:CDS 45.0%
AGGTTGTGATTAGTGCAGAC+TGG - chr3_1:26659320-26659339 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr3_1:26659470-26659489 None:intergenic 45.0%
TGTGCAAGGATTCACAAGGA+AGG - chr3_1:26659691-26659710 None:intergenic 45.0%
TATCCAGACTCTTGAGGACA+GGG - chr3_1:26659787-26659806 None:intergenic 45.0%
ATATCCAGACTCTTGAGGAC+AGG - chr3_1:26659788-26659807 None:intergenic 45.0%
!! GGATTGGAGTCATTTTCTCC+AGG + chr3_1:26659905-26659924 Msa0354670:intron 45.0%
!! TTGGAGTCATTTTCTCCAGG+TGG + chr3_1:26659908-26659927 Msa0354670:intron 45.0%
! AGGGCAGCTAGAGTATTCAT+TGG - chr3_1:26660001-26660020 None:intergenic 45.0%
TCTAGCTGCCCTTCAAGAAT+TGG + chr3_1:26660009-26660028 Msa0354670:intron 45.0%
CTCAGTAGCCGTAAACTAAC+AGG - chr3_1:26660082-26660101 None:intergenic 45.0%
AGTTTACGGCTACTGAGTGT+TGG + chr3_1:26660085-26660104 Msa0354670:intron 45.0%
GGATTTCGCAGATGGGAAAT+TGG + chr3_1:26660119-26660138 Msa0354670:intron 45.0%
CTCTCAGTATTGCGAATTGC+AGG + chr3_1:26660157-26660176 Msa0354670:intron 45.0%
! AAATTCAAGGGTACGGAGAG+AGG - chr3_1:26660308-26660327 None:intergenic 45.0%
TGCCTTCACTTTCTGTACTG+AGG + chr3_1:26660368-26660387 Msa0354670:intron 45.0%
GTGATCACATGAGTGAAGTG+AGG + chr3_1:26660490-26660509 Msa0354670:intron 45.0%
! TAGCTTTTGTCGTTGCTTCC+AGG + chr3_1:26660626-26660645 Msa0354670:intron 45.0%
GAGACTGGAAATGGAGAAAG+GGG - chr3_1:26660658-26660677 None:intergenic 45.0%
!!! TAAAAAATTATTTAATTTTG+GGG - chr3_1:26653981-26654000 None:intergenic 5.0%
!!! TTGATTTATTATTTTTTAAT+TGG + chr3_1:26657149-26657168 Msa0354670:intron 5.0%
!!! TGATTTATTATTTTTTAATT+GGG + chr3_1:26657150-26657169 Msa0354670:intron 5.0%
!! ATTATAAATTAAAATACATA+TGG - chr3_1:26657881-26657900 None:intergenic 5.0%
!!! AAAATTAATTTTAGTTATAA+TGG + chr3_1:26658801-26658820 Msa0354670:intron 5.0%
AGAAATACTAACCGGTGCCC+CGG + chr3_1:26654771-26654790 Msa0354670:intron 50.0%
ATATTTAGGGGTCCGGTCAC+TGG - chr3_1:26654924-26654943 None:intergenic 50.0%
CACGCTTCTTGAGGATTTCC+CGG + chr3_1:26655149-26655168 Msa0354670:intron 50.0%
TAGGCAAGAGATGAGCATCC+AGG - chr3_1:26655845-26655864 None:intergenic 50.0%
GGATGCTCATCTCTTGCCTA+TGG + chr3_1:26655845-26655864 Msa0354670:CDS 50.0%
CCCTTCCGTGTGAAGAGTAA+TGG + chr3_1:26655887-26655906 Msa0354670:CDS 50.0%
CCCATTACTCTTCACACGGA+AGG - chr3_1:26655891-26655910 None:intergenic 50.0%
TGAATATCCTACCCCAGCTG+GGG - chr3_1:26656281-26656300 None:intergenic 50.0%
!! TATGAGTGGTGGACCAATCC+TGG - chr3_1:26657085-26657104 None:intergenic 50.0%
!! GGATTGGTCCACCACTCATA+TGG + chr3_1:26657085-26657104 Msa0354670:intron 50.0%
! GGTGCTAGTATGGCTCTGTT+TGG + chr3_1:26657242-26657261 Msa0354670:intron 50.0%
TAACCGTCCGAAGAAGGTCT+CGG + chr3_1:26659343-26659362 Msa0354670:intron 50.0%
TTACCGAGACCTTCTTCGGA+CGG - chr3_1:26659349-26659368 None:intergenic 50.0%
AAGCAATTAGGGTCGGTCCA+AGG + chr3_1:26659413-26659432 Msa0354670:intron 50.0%
AGCAATTAGGGTCGGTCCAA+GGG + chr3_1:26659414-26659433 Msa0354670:intron 50.0%
AAACTAGGGCCTCACTAGCT+CGG - chr3_1:26659440-26659459 None:intergenic 50.0%
!! CTACTGAGTGTTGGCCATCT+TGG + chr3_1:26660094-26660113 Msa0354670:intron 50.0%
!! TGAGTGTTGGCCATCTTGGA+GGG + chr3_1:26660098-26660117 Msa0354670:intron 50.0%
TCTGCGAAATCCCTCCAAGA+TGG - chr3_1:26660111-26660130 None:intergenic 50.0%
TCTTGGAGGGATTTCGCAGA+TGG + chr3_1:26660111-26660130 Msa0354670:intron 50.0%
CTTGGAGGGATTTCGCAGAT+GGG + chr3_1:26660112-26660131 Msa0354670:intron 50.0%
! AGTGAAGGCAGTCCCTCTTT+TGG - chr3_1:26660358-26660377 None:intergenic 50.0%
CAAGTTTGCAGAGGAAGCGA+GGG + chr3_1:26660416-26660435 Msa0354670:intron 50.0%
AAGTGAGGGTCGTTGATCAC+AGG + chr3_1:26660505-26660524 Msa0354670:intron 50.0%
GTGTTCCTTTGCTCCAACAC+TGG + chr3_1:26660696-26660715 Msa0354670:intron 50.0%
CAAGAACAGGTAGCCAGTGT+TGG - chr3_1:26660712-26660731 None:intergenic 50.0%
! GGGGCACTCATTCAACTACG+AGG + chr3_1:26654413-26654432 Msa0354670:intron 55.0%
GAAATACTAACCGGTGCCCC+GGG + chr3_1:26654772-26654791 Msa0354670:intron 55.0%
TTGTTCCTTGAGTCCCCAGC+TGG + chr3_1:26656265-26656284 Msa0354670:CDS 55.0%
TGTTCCTTGAGTCCCCAGCT+GGG + chr3_1:26656266-26656285 Msa0354670:CDS 55.0%
CCTTCTTCGGACGGTTAGTG+AGG - chr3_1:26659340-26659359 None:intergenic 55.0%
CCTCACTAACCGTCCGAAGA+AGG + chr3_1:26659337-26659356 Msa0354670:intron 55.0%
TCTCCCTGTCCTCAAGAGTC+TGG + chr3_1:26659781-26659800 Msa0354670:intron 55.0%
!! CTGAGTGTTGGCCATCTTGG+AGG + chr3_1:26660097-26660116 Msa0354670:intron 55.0%
GCAAGTTTGCAGAGGAAGCG+AGG + chr3_1:26660415-26660434 Msa0354670:intron 55.0%
AGAGGAAGCGAGGGAAAGAG+TGG + chr3_1:26660425-26660444 Msa0354670:intron 55.0%
TGGAAATGGAGAAAGGGGCG+AGG - chr3_1:26660653-26660672 None:intergenic 55.0%
! GGTAGCCAGTGTTGGAGCAA+AGG - chr3_1:26660704-26660723 None:intergenic 55.0%
TTAATCAGTGCCCGGGGCAC+CGG - chr3_1:26654785-26654804 None:intergenic 60.0%
! AGGGGTCCGGTCACTGGTTA+AGG - chr3_1:26654918-26654937 None:intergenic 60.0%
GTTCCTTGAGTCCCCAGCTG+GGG + chr3_1:26656267-26656286 Msa0354670:CDS 60.0%
TTCGGAGTGGGCAATCCACC+TGG - chr3_1:26659926-26659945 None:intergenic 60.0%
CTACCCCAGCTGGGGACTCA+AGG - chr3_1:26656273-26656292 None:intergenic 65.0%
CTTGAGTCCCCAGCTGGGGT+AGG + chr3_1:26656271-26656290 Msa0354670:CDS 65.0%
GTCCAAGGGCCGAGCTAGTG+AGG + chr3_1:26659428-26659447 Msa0354670:intron 65.0%
GAGGACAGGGAGAGAGCCCA+AGG - chr3_1:26659774-26659793 None:intergenic 65.0%
TGGAGAAAGGGGCGAGGACC+TGG - chr3_1:26660647-26660666 None:intergenic 65.0%
GGCCTCACTAGCTCGGCCCT+TGG - chr3_1:26659433-26659452 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 26652614 26660785 26652614 ID=Msa0354670;Name=Msa0354670
chr3_1 mRNA 26652614 26660785 26652614 ID=Msa0354670-mRNA-1;Parent=Msa0354670;Name=Msa0354670-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.2|0|0.83|0.6|0.33|6|0|333
chr3_1 exon 26652614 26652815 26652614 ID=Msa0354670-mRNA-1:exon:5803;Parent=Msa0354670-mRNA-1
chr3_1 exon 26652825 26652989 26652825 ID=Msa0354670-mRNA-1:exon:5804;Parent=Msa0354670-mRNA-1
chr3_1 exon 26655840 26655947 26655840 ID=Msa0354670-mRNA-1:exon:5805;Parent=Msa0354670-mRNA-1
chr3_1 exon 26656254 26656528 26656254 ID=Msa0354670-mRNA-1:exon:5806;Parent=Msa0354670-mRNA-1
chr3_1 exon 26659107 26659347 26659107 ID=Msa0354670-mRNA-1:exon:5807;Parent=Msa0354670-mRNA-1
chr3_1 exon 26660775 26660785 26660775 ID=Msa0354670-mRNA-1:exon:5808;Parent=Msa0354670-mRNA-1
chr3_1 CDS 26652614 26652815 26652614 ID=Msa0354670-mRNA-1:cds;Parent=Msa0354670-mRNA-1
chr3_1 CDS 26652825 26652989 26652825 ID=Msa0354670-mRNA-1:cds;Parent=Msa0354670-mRNA-1
chr3_1 CDS 26655840 26655947 26655840 ID=Msa0354670-mRNA-1:cds;Parent=Msa0354670-mRNA-1
chr3_1 CDS 26656254 26656528 26656254 ID=Msa0354670-mRNA-1:cds;Parent=Msa0354670-mRNA-1
chr3_1 CDS 26659107 26659347 26659107 ID=Msa0354670-mRNA-1:cds;Parent=Msa0354670-mRNA-1
chr3_1 CDS 26660775 26660785 26660775 ID=Msa0354670-mRNA-1:cds;Parent=Msa0354670-mRNA-1
Gene Sequence

>Msa0354670

ATGAGCAAACCAAATTCTTCATTGGTTCATCTATCCATTCTCATTGTCACTCTCTTTGTGGCTGAAATCCATGGAAGCAAACAAAGTAGAGCTCTTACAAAACTACAAAAGTCCAAGTACAATATAAATTCAAAAATTGATACAAGTCACTTTAAGATACATGAGAATATTGTGCTTGATGCAATGGTTCATTCTCAAGATGAGAAAGACAAGATTGAGAAGCTACCAGGGCAACCAAATGTGAAATTCTCTCAATATGGAGGGTATGTTACAGTGGACAAAATAGCAGGACGTGCTTTTTACTATTATTTTGTGGAAGCTCATCATTCTAAAGAAACATTGCCTCTTCTTCTTTGGCTCAATGGAGGTCCTGGATGCTCATCTCTTGCCTATGGAGCAATGCAAGAAGTTGGACCCTTCCGTGTGAAGAGTAATGGGAAAACCCTTCACAAAAATAACTATTCATGGAACTATGCTGCAAATTTGTTGTTCCTTGAGTCCCCAGCTGGGGTAGGATATTCATACTCAAATAGATCATCTGATTATGACACCAATGGAGATAGAAGAACAGCTGCAGATAACTATGTTTTTTTAGTGAATTGGTTAGAAAGATTTCCTGAATATAAGAATAGAGATTTCTACATTGCTGGAGAAAGTTATGCTGGTCATTATGTCCCTCAACTTGCACACAATATTCTCTACCATAATAAAAAGGCTAATAGGACAATTATCAACCTCAAAGGAATTATGATTGGGAATGCAGTGATCAATGACGACACAGATGAGCAAGGAATGTACGATTTTCTTGCTAGTCATGCAATCATATCAGATCAAACAGCATATAATATCAACAAATTTTGTAATTTTTCATCAACTTCCAATCAAACTACTGAGTGCAGTGAAGCGGCAAGTGAAGTTGATAAGAACACGTTGTTCCTTGATATATACAACATCTATGCTCCAGTCTGCACTAATCACAACCTCACTAACCCTGGTAACTAG
Protein sequence

>Msa0354670

MSKPNSSLVHLSILIVTLFVAEIHGSKQSRALTKLQKSKYNINSKIDTSHFKIHENIVLDAMVHSQDEKDKIEKLPGQPNVKFSQYGGYVTVDKIAGRAFYYYFVEAHHSKETLPLLLWLNGGPGCSSLAYGAMQEVGPFRVKSNGKTLHKNNYSWNYAANLLFLESPAGVGYSYSNRSSDYDTNGDRRTAADNYVFLVNWLERFPEYKNRDFYIAGESYAGHYVPQLAHNILYHNKKANRTIINLKGIMIGNAVINDDTDEQGMYDFLASHAIISDQTAYNINKFCNFSSTSNQTTECSEAASEVDKNTLFLDIYNIYAPVCTNHNLTNPGN*