AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1331820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1331820 MtrunA17_Chr4g0063141 95.291 892 22 3 1 877 1 887 0.0 1753
Msa1331820 MtrunA17_Chr1g0148981 45.900 1000 358 15 19 857 24 1001 0.0 841
Msa1331820 MtrunA17_Chr2g0277651 45.361 679 341 7 28 687 47 714 0.0 602
Msa1331820 MtrunA17_Chr8g0356081 55.324 479 190 5 26 487 20 491 2.59e-179 533
Msa1331820 MtrunA17_Chr3g0138131 60.591 406 137 6 18 406 34 433 1.04e-164 488
Msa1331820 MtrunA17_Chr2g0286031 41.527 773 301 25 128 861 17 677 2.64e-160 484
Msa1331820 MtrunA17_Chr3g0138671 47.284 497 234 7 23 498 20 509 5.61e-149 452
Msa1331820 MtrunA17_Chr3g0138141 51.562 448 201 5 418 859 11 448 1.06e-148 446
Msa1331820 MtrunA17_Chr5g0434371 33.424 736 440 15 10 717 45 758 1.63e-121 388
Msa1331820 MtrunA17_Chr4g0009161 88.430 121 10 2 409 526 6 125 4.64e-61 206
Msa1331820 MtrunA17_Chr2g0286041 53.913 115 53 0 11 125 16 130 5.80e-37 135
Msa1331820 MtrunA17_Chr4g0063071 34.524 252 146 2 271 503 5 256 9.18e-37 139
Msa1331820 MtrunA17_Chr4g0062571 35.776 232 130 8 77 306 2 216 4.79e-28 113
Msa1331820 MtrunA17_Chr4g0062561 35.319 235 132 8 77 306 2 221 5.02e-27 118
Msa1331820 MtrunA17_Chr4g0063081 31.606 193 128 3 58 249 3 192 8.41e-25 102
Msa1331820 MtrunA17_Chr4g0073941 20.208 480 288 9 46 431 99 577 1.51e-18 90.9
Msa1331820 MtrunA17_Chr8g0347121 20.920 435 246 10 87 431 113 539 2.39e-15 80.5
Msa1331820 MtrunA17_Chr6g0461061 27.053 207 126 3 515 697 250 455 2.98e-15 79.7
Msa1331820 MtrunA17_Chr6g0461061 35.833 120 76 1 511 629 367 486 7.71e-11 65.9
Msa1331820 MtrunA17_Chr5g0418551 30.625 160 79 1 515 674 97 224 1.81e-14 74.3
Msa1331820 MtrunA17_Chr5g0418551 29.655 145 96 3 570 709 50 193 4.07e-11 64.3
Msa1331820 MtrunA17_Chr4g0001481 19.844 514 290 17 24 431 85 582 2.87e-13 73.9
Msa1331820 MtrunA17_Chr3g0129271 85.000 40 3 1 490 526 1 40 2.55e-12 68.2
Msa1331820 MtrunA17_Chr5g0405531 55.769 52 20 1 242 290 15 66 3.18e-12 66.2
Msa1331820 MtrunA17_Chr1g0181121 20.165 486 279 16 45 431 43 518 5.79e-12 69.7
Msa1331820 MtrunA17_Chr5g0443471 32.500 160 93 2 444 603 1 145 6.29e-12 68.9
Msa1331820 MtrunA17_Chr2g0327711 30.102 196 125 8 514 700 107 299 1.91e-11 67.8
Msa1331820 MtrunA17_Chr5g0405451 33.824 136 87 2 545 678 273 407 2.13e-11 67.0
Msa1331820 MtrunA17_Chr1g0180301 29.560 159 85 3 535 693 65 196 2.66e-11 63.9
Msa1331820 MtrunA17_Chr1g0196261 27.500 200 133 3 515 713 260 448 3.28e-11 66.6
Msa1331820 MtrunA17_Chr2g0284901 39.785 93 56 0 506 598 36 128 3.51e-11 66.6
Msa1331820 MtrunA17_Chr4g0049351 30.000 170 115 3 529 695 45 213 6.58e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1331820 AT2G26650.1 68.729 873 226 14 7 858 7 853 0.0 1215
Msa1331820 AT2G26650.2 67.829 774 205 12 103 858 1 748 0.0 1058
Msa1331820 AT2G25600.1 61.085 866 299 10 14 858 36 884 0.0 1051
Msa1331820 AT4G32500.1 59.540 870 304 12 14 859 32 877 0.0 1033
Msa1331820 AT4G22200.1 45.147 680 340 10 9 665 28 697 0.0 581
Msa1331820 AT5G46240.1 58.491 477 174 5 24 483 29 498 0.0 566
Msa1331820 AT4G18290.2 57.374 495 187 5 24 501 40 527 0.0 556
Msa1331820 AT4G18290.1 57.374 495 187 5 24 501 29 516 0.0 556
Msa1331820 AT4G22200.2 46.964 560 265 9 9 545 28 578 3.92e-163 489
Msa1331820 AT4G32650.3 45.603 489 244 6 23 493 54 538 7.84e-136 420
Msa1331820 AT4G32650.1 45.603 489 244 6 23 493 54 538 9.07e-136 420
Msa1331820 AT4G32650.2 45.603 489 244 6 23 493 54 538 1.05e-135 418
Msa1331820 AT5G37500.1 35.620 685 394 15 46 701 57 723 7.86e-122 389
Msa1331820 AT3G02850.2 34.488 693 405 15 43 706 71 743 3.99e-120 382
Msa1331820 AT3G02850.1 34.488 693 405 15 43 706 71 743 1.19e-119 383
Msa1331820 AT5G37500.2 34.512 707 394 16 46 701 57 745 1.18e-116 375
Msa1331820 AT5G37500.3 34.379 701 391 16 52 701 9 691 2.47e-115 370
Msa1331820 AT5G37500.4 34.763 676 372 16 46 670 57 714 5.02e-114 365
Msa1331820 AT3G02850.3 34.026 529 309 11 43 545 71 585 1.24e-90 299
Msa1331820 AT1G15990.1 20.816 490 278 13 46 431 90 573 3.12e-17 87.0
Msa1331820 AT4G30560.1 19.835 484 288 11 46 431 103 584 2.49e-16 84.3
Msa1331820 AT4G30560.4 19.835 484 288 11 46 431 103 584 2.49e-16 84.3
Msa1331820 AT4G30560.5 19.835 484 288 11 46 431 77 558 3.14e-16 84.0
Msa1331820 AT4G30560.2 19.835 484 288 11 46 431 77 558 3.14e-16 84.0
Msa1331820 AT4G30560.3 19.835 484 288 11 46 431 77 558 3.14e-16 84.0
Msa1331820 AT2G03430.1 32.500 160 76 1 515 674 90 217 7.90e-13 69.7
Msa1331820 AT2G23980.9 23.301 206 140 3 243 431 381 585 6.84e-12 70.1
Msa1331820 AT2G23980.10 23.301 206 140 3 243 431 381 585 6.84e-12 70.1
Msa1331820 AT2G23980.1 23.301 206 140 3 243 431 381 585 6.84e-12 70.1
Msa1331820 AT2G23980.4 23.301 206 140 3 243 431 381 585 6.84e-12 70.1
Msa1331820 AT2G23980.5 23.301 206 140 3 243 431 381 585 6.84e-12 70.1
Msa1331820 AT2G23980.6 23.301 206 140 3 243 431 354 558 7.28e-12 69.7
Msa1331820 AT2G23980.3 23.301 206 140 3 243 431 404 608 8.70e-12 69.7
Msa1331820 AT2G23980.2 23.301 206 140 3 243 431 404 608 8.70e-12 69.7
Msa1331820 AT2G23980.8 23.301 206 140 3 243 431 404 608 8.70e-12 69.7
Msa1331820 AT2G23980.7 23.301 206 140 3 243 431 404 608 8.70e-12 69.7
Msa1331820 AT2G31800.1 43.158 95 54 0 506 600 73 167 1.07e-11 68.6
Msa1331820 AT5G02620.4 29.592 196 126 7 514 700 97 289 3.04e-11 67.4
Msa1331820 AT5G02620.1 29.592 196 126 7 514 700 97 289 3.04e-11 67.4
Msa1331820 AT5G02620.3 29.592 196 126 7 514 700 97 289 3.04e-11 67.4
Msa1331820 AT2G43850.1 41.053 95 56 0 506 600 76 170 6.30e-11 66.2
Msa1331820 AT2G43850.2 41.053 95 56 0 506 600 76 170 6.47e-11 66.2
Msa1331820 AT2G43850.3 41.053 95 56 0 506 600 76 170 6.56e-11 66.2
Msa1331820 AT1G19780.2 22.010 209 145 3 240 431 161 368 6.57e-11 66.2
Msa1331820 AT5G57940.1 24.286 210 141 4 239 431 361 569 7.93e-11 66.2
Msa1331820 AT5G57940.2 24.286 210 141 4 239 431 361 569 7.93e-11 66.2
Msa1331820 AT5G57940.3 24.286 210 141 4 239 431 354 562 8.74e-11 66.2
Msa1331820 AT1G19780.1 22.010 209 145 3 240 431 372 579 9.76e-11 66.2

Find 193 sgRNAs with CRISPR-Local

Find 421 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATTGGATCTAAGAAATT+TGG 0.159426 8_4:-51486631 Msa1331820:CDS
TTTAAAGAGTTACTTGAAAT+TGG 0.180416 8_4:-51486646 Msa1331820:CDS
TCTTACGCCTTGGTCGATTT+TGG 0.184648 8_4:+51486863 None:intergenic
AGTAACTCTTTAAAACTTTC+AGG 0.206337 8_4:+51486655 None:intergenic
AAGAAGGTTATTCATGATTA+TGG 0.214802 8_4:+51489027 None:intergenic
TATTTCCAAGCAATCTGTTT+TGG 0.232434 8_4:+51490830 None:intergenic
ACCAAAACTCCCTCCATAAT+TGG 0.233288 8_4:+51488903 None:intergenic
TGGGTATCTCCATTTGAATT+TGG 0.237646 8_4:-51490983 Msa1331820:CDS
TTGATAATTCAAGTTCTTCT+TGG 0.249005 8_4:+51492939 None:intergenic
TCCAATTATGGAGGGAGTTT+TGG 0.253826 8_4:-51488904 Msa1331820:CDS
GTGGTTCCAACGCTGTTATT+TGG 0.284651 8_4:+51487198 None:intergenic
CTTACTATTATCTTCTCCTT+TGG 0.288283 8_4:+51487020 None:intergenic
ATTATCGTAAGTACACATTA+TGG 0.303901 8_4:+51486466 None:intergenic
ATGCTTGATCTGATGGCTTT+AGG 0.306463 8_4:+51489720 None:intergenic
AACTTTCATAATTCACTCTT+CGG 0.310197 8_4:-51486835 Msa1331820:CDS
TTTAACTCTCCGGTTACTTC+TGG 0.312354 8_4:+51492865 None:intergenic
TGATTTCTGTATGTCCTTGT+TGG 0.313279 8_4:+51487058 None:intergenic
TGTAAGATAACATCTTCTTT+AGG 0.317107 8_4:+51489484 None:intergenic
CCAAATGAATCTGACAATAA+TGG 0.317153 8_4:-51488765 Msa1331820:CDS
AATCATGAATAACCTTCTTC+AGG 0.328424 8_4:-51489023 Msa1331820:intron
GCTGCAAAGCATAGACTTAC+TGG 0.328835 8_4:+51488840 None:intergenic
TGAATCAGTAACAAAACTTT+TGG 0.330718 8_4:-51487340 Msa1331820:CDS
CTCCTTATGATCGTCGTTAC+CGG 0.333638 8_4:-51492823 Msa1331820:intron
CCATTATTGTCAGATTCATT+TGG 0.334448 8_4:+51488765 None:intergenic
ACAATTGTTAAAACGAGGTT+TGG 0.336188 8_4:-51488790 Msa1331820:CDS
ACAAAGGTTGTTTGCAAAGA+TGG 0.348494 8_4:-51486598 Msa1331820:CDS
TGTTAGCACCATGTTCTAAT+AGG 0.348874 8_4:+51487127 None:intergenic
AACAATTAGTTGTCCTGAAA+AGG 0.352253 8_4:-51486707 Msa1331820:CDS
GACAATTTCAACACTGTCTT+CGG 0.357495 8_4:+51487155 None:intergenic
TCGCCAATCCATGTCTTTGC+TGG 0.359083 8_4:+51490194 None:intergenic
AACCTTCTTTGTGGCTTACC+TGG 0.361868 8_4:-51490882 Msa1331820:CDS
TCTTGAGGTGTAGGCATTGT+TGG 0.364189 8_4:+51486919 None:intergenic
AGAGCTGAACGATCCAATTA+TGG 0.367123 8_4:-51488916 Msa1331820:CDS
CTTGTAGACGAGGAGGTAAT+TGG 0.367960 8_4:+51489823 None:intergenic
ATTGACAAACAAGATAAATA+TGG 0.369621 8_4:-51487105 Msa1331820:CDS
CCTGAAAAGGGTGAGGTTGC+TGG 0.373166 8_4:-51486694 Msa1331820:CDS
TATTCAACATGCTTAGGCTT+TGG 0.375101 8_4:-51490715 Msa1331820:CDS
TTTCTATTCTCTGATGGATA+AGG 0.375315 8_4:-51489685 Msa1331820:intron
CTATCCTGCCTCTCAGGAAT+AGG 0.383653 8_4:+51486976 None:intergenic
ATTAGAGGGTGTTGTACAAT+TGG 0.384084 8_4:+51486498 None:intergenic
CCTCAAGATGGACCATTTCA+TGG 0.385679 8_4:-51486904 Msa1331820:CDS
TATAGTTCTAACCTTCTTTG+TGG 0.388479 8_4:-51490891 Msa1331820:CDS
GTTACAGATAATATTGTCAA+TGG 0.388775 8_4:-51490929 Msa1331820:CDS
ACTTTCATAATTCACTCTTC+GGG 0.388959 8_4:-51486834 Msa1331820:CDS
CTCGGAGGGCTTGCAGCAAC+AGG 0.388996 8_4:-51489760 Msa1331820:CDS
TGTTGGTCAGCTAAATCTCT+TGG 0.395126 8_4:+51487075 None:intergenic
CTTGGAAATATGCAAGAACT+TGG 0.401223 8_4:-51490817 Msa1331820:CDS
ACTTTGACAACAGTTGGTTA+TGG 0.407995 8_4:-51490101 Msa1331820:CDS
CTATTTGCTGTGCACTGTGC+TGG 0.409744 8_4:-51490254 Msa1331820:CDS
AACCGTGTACTAACAACTAC+TGG 0.412125 8_4:-51493031 Msa1331820:five_prime_UTR
TCTTGGCCACACATAGTCAT+TGG 0.414092 8_4:+51492956 None:intergenic
TCTCAAAGGCGGGGTTGAAC+AGG 0.416047 8_4:-51489298 Msa1331820:intron
GGAGAACTTTGTGGCGAGAT+TGG 0.419836 8_4:-51489166 Msa1331820:CDS
TTAAGGAATCCAAATTCAAA+TGG 0.420962 8_4:+51490974 None:intergenic
AATGGTGCCACCTTGCAAAT+TGG 0.431569 8_4:-51487312 Msa1331820:CDS
TCAAATATGTCAATTATCAT+TGG 0.432061 8_4:+51486427 None:intergenic
ATTGGTTGTGTATACTGCTT+GGG 0.432083 8_4:-51491002 Msa1331820:CDS
GGTAATTGATTTCAGATTGT+CGG 0.435654 8_4:-51489202 Msa1331820:intron
ACTTTACTATCCTGCCTCTC+AGG 0.438582 8_4:+51486970 None:intergenic
TTATGGATTGACACCATTAG+AGG 0.439624 8_4:+51486483 None:intergenic
AAAGCCTAAGCATGTTGAAT+AGG 0.440645 8_4:+51490717 None:intergenic
CAACTAATTGTTACTCTGGT+TGG 0.446246 8_4:+51486718 None:intergenic
CAACAGTTGACTTAATCGTT+TGG 0.446381 8_4:+51489105 None:intergenic
AAAACTTGATGCAGCTTGTA+TGG 0.447111 8_4:+51489857 None:intergenic
TACCGGTAACGACGATCATA+AGG 0.451804 8_4:+51492821 None:intergenic
AATTGTACAACACCCTCTAA+TGG 0.453079 8_4:-51486496 Msa1331820:CDS
CATTGGTTGTGTATACTGCT+TGG 0.454787 8_4:-51491003 Msa1331820:CDS
GAACCATCATTTCCATGAAA+TGG 0.456733 8_4:+51486892 None:intergenic
TGAATATTTACCTCTAACGT+TGG 0.456892 8_4:+51488577 None:intergenic
CTATGCTTTGCAGCAGAAAG+AGG 0.457199 8_4:-51488831 Msa1331820:CDS
ATTGTCGGTGAGGCGAAAAC+AGG 0.459413 8_4:-51489187 Msa1331820:CDS
GGGGCAAATCCCAACGTTAG+AGG 0.463630 8_4:-51488587 Msa1331820:intron
ACTTGGTAGTTCTCAAAGGC+GGG 0.467309 8_4:-51489308 Msa1331820:CDS
GGACCATTTCATGGAAATGA+TGG 0.467455 8_4:-51486895 Msa1331820:CDS
AATATTATCTGTAACAGAAA+GGG 0.469418 8_4:+51490937 None:intergenic
GCACTGTGGGAGGCTATACT+TGG 0.472097 8_4:-51487369 Msa1331820:CDS
ATCATCTCCCTTTCATTCAC+CGG 0.475138 8_4:+51490068 None:intergenic
AATTTACTTGCAGATTCTGA+TGG 0.478811 8_4:-51487399 Msa1331820:intron
ACCGGAATATTACCTTCTCT+TGG 0.480108 8_4:-51492890 Msa1331820:CDS
GGAAACTTTCCTTGTTACAT+TGG 0.482337 8_4:-51491020 Msa1331820:CDS
GAATATTTACCTCTAACGTT+GGG 0.484672 8_4:+51488578 None:intergenic
CAATAATGGAAGGACAGCTT+TGG 0.484704 8_4:-51488751 Msa1331820:intron
ATGGCCTATTCAACATGCTT+AGG 0.485900 8_4:-51490721 Msa1331820:CDS
ATAACCCAAAACAGATTGCT+TGG 0.486830 8_4:-51490835 Msa1331820:CDS
GGATTAACAGCATATCTGAT+TGG 0.489401 8_4:-51490014 Msa1331820:CDS
TGTGCCTATTCCTGAGAGGC+AGG 0.490748 8_4:-51486980 Msa1331820:CDS
GAGGTCTGAGTTTAACTCTC+CGG 0.494710 8_4:+51492855 None:intergenic
TGGGTTATCTACGAACAAAT+AGG 0.494743 8_4:+51490850 None:intergenic
GATATGTGACAACTATATAC+TGG 0.495633 8_4:-51490133 Msa1331820:CDS
CTCTTGGTGCCAGAAGTAAC+CGG 0.497763 8_4:-51492874 Msa1331820:CDS
ATCACTACTTTGACAACAGT+TGG 0.498381 8_4:-51490107 Msa1331820:CDS
CAATATTATCTGTAACAGAA+AGG 0.504476 8_4:+51490936 None:intergenic
TTTACTTCTGTTAGATTATG+GGG 0.504997 8_4:-51488606 Msa1331820:CDS
ATTTGCATCCGGTGAATGAA+AGG 0.506377 8_4:-51490076 Msa1331820:CDS
TTCATGGAAATGATGGTTCG+TGG 0.507610 8_4:-51486888 Msa1331820:CDS
GTTCTAACTGTAAAATGTTG+TGG 0.508227 8_4:+51489127 None:intergenic
ATGTGAAATGCTTGATCTGA+TGG 0.508712 8_4:+51489713 None:intergenic
ACAATTAGTTGTCCTGAAAA+GGG 0.509385 8_4:-51486706 Msa1331820:CDS
CATGTTAGCTCGCGGTAGGA+TGG 0.511666 8_4:-51488868 Msa1331820:CDS
AGGACAACTAATTGTTACTC+TGG 0.511991 8_4:+51486714 None:intergenic
ACCTTGCAAATTGGTGATGT+TGG 0.515517 8_4:-51487303 Msa1331820:CDS
CCATAGGTTTGCATAGGAGC+AGG 0.516008 8_4:+51490740 None:intergenic
GATCCAGCAAAGACATGGAT+TGG 0.516138 8_4:-51490197 Msa1331820:CDS
AGAGGCAGGATAGTAAAGTA+AGG 0.520908 8_4:-51486966 Msa1331820:CDS
ATGAATAACAATGCAAGGAA+TGG 0.521783 8_4:-51486760 Msa1331820:CDS
CCATGAAATGGTCCATCTTG+AGG 0.523554 8_4:+51486904 None:intergenic
AAGATAACATCTTCTTTAGG+TGG 0.523564 8_4:+51489487 None:intergenic
GTCCAGGTAAGCCACAAAGA+AGG 0.528851 8_4:+51490880 None:intergenic
GAACTTGAATTATCAAGAGA+TGG 0.529174 8_4:-51492932 Msa1331820:CDS
TCTTTAGGTGGAAAATACTC+CGG 0.530265 8_4:+51489499 None:intergenic
AGTCACTATAGTCTCACAAC+CGG 0.534124 8_4:-51492908 Msa1331820:CDS
TTGCAAGACATTATGCGATA+CGG 0.534785 8_4:-51487237 Msa1331820:CDS
AAGTTATTATTCTTACGCCT+TGG 0.534957 8_4:+51486853 None:intergenic
ATTTGGTATAGTTGCTACAA+AGG 0.535494 8_4:-51486614 Msa1331820:CDS
TTCTAGTTCGACTTGTGCCA+TGG 0.537239 8_4:+51489970 None:intergenic
ACCAAGAGAAGGTAATATTC+CGG 0.537473 8_4:+51492889 None:intergenic
CTTTGAGCCTAGGCTTGAGA+AGG 0.537587 8_4:-51490425 Msa1331820:CDS
CAGCATATAGCAGCATGTAA+AGG 0.539958 8_4:-51488644 Msa1331820:CDS
TGGTTATGGAGATTTGCATC+CGG 0.540519 8_4:-51490087 Msa1331820:CDS
CTGAAAAGGGTGAGGTTGCT+GGG 0.541290 8_4:-51486693 Msa1331820:CDS
CCTGCTCCTATGCAAACCTA+TGG 0.542911 8_4:-51490740 Msa1331820:CDS
TTCAAATGAATAACAATGCA+AGG 0.543233 8_4:-51486765 Msa1331820:CDS
GCGAAAACAGGAGAACTTTG+TGG 0.545507 8_4:-51489175 Msa1331820:CDS
AGCTGAAATTGATGATATTG+AGG 0.548119 8_4:-51486575 Msa1331820:CDS
AGCTTGAACAATATTCAAGA+AGG 0.549670 8_4:+51489066 None:intergenic
ACAAACAAGATAAATATGGT+TGG 0.551034 8_4:-51487101 Msa1331820:CDS
CATTCTAGTCACTGGTGCTG+TGG 0.554382 8_4:-51489437 Msa1331820:intron
GATAGTAAAGTAAGGTACCT+TGG 0.555336 8_4:-51486958 Msa1331820:CDS
TATCATTGGATATATGAAGC+AGG 0.556792 8_4:+51486441 None:intergenic
AATATTGTTCAAGCTAATGT+TGG 0.558746 8_4:-51489058 Msa1331820:CDS
TTTCTGTCCTTCTCAAGCCT+AGG 0.563193 8_4:+51490418 None:intergenic
AAGCATGTTGAATAGGCCAT+AGG 0.563411 8_4:+51490724 None:intergenic
ATATGTGCAACAAGCTCAGA+AGG 0.564694 8_4:+51490767 None:intergenic
AACTGTTGTCAAAGTAGTGA+TGG 0.565441 8_4:+51490109 None:intergenic
TTCCAGTAGTTGTTAGTACA+CGG 0.566069 8_4:+51493029 None:intergenic
CTGTGGGAGGCTATACTTGG+AGG 0.566130 8_4:-51487366 Msa1331820:CDS
AATGGTCCATCTTGAGGTGT+AGG 0.568937 8_4:+51486910 None:intergenic
TTACTTCTGGCACCAAGAGA+AGG 0.574678 8_4:+51492878 None:intergenic
CAATATTCAAGAAGGTGGTA+CGG 0.576345 8_4:+51489074 None:intergenic
AACAAGCTCAGAAGGAATGA+TGG 0.576388 8_4:+51490775 None:intergenic
ACGCTTCCAAATAACAGCGT+TGG 0.581242 8_4:-51487204 Msa1331820:CDS
TTTGCATCCGGTGAATGAAA+GGG 0.582391 8_4:-51490075 Msa1331820:CDS
AATAGGCCATAGGTTTGCAT+AGG 0.582725 8_4:+51490734 None:intergenic
GTTCAAGCTAATGTTGGTGA+CGG 0.585004 8_4:-51489052 Msa1331820:CDS
ATTTCCTTCAGCAGTCCTTG+TGG 0.585108 8_4:-51490160 Msa1331820:CDS
ATATTATACAAACCTGAAGA+AGG 0.585498 8_4:+51489011 None:intergenic
ACCAACATCACCAATTTGCA+AGG 0.588031 8_4:+51487302 None:intergenic
CAGGACTTGGTAGTTCTCAA+AGG 0.591073 8_4:-51489312 Msa1331820:CDS
AAAGGTATCTGAGATGAAGC+CGG 0.592222 8_4:-51489518 Msa1331820:intron
ATGACTAACTTAGTTGTCCA+TGG 0.595240 8_4:-51489987 Msa1331820:CDS
AAATAACAGCGTTGGAACCA+CGG 0.598946 8_4:-51487196 Msa1331820:CDS
ACAATGCCTACACCTCAAGA+TGG 0.600887 8_4:-51486916 Msa1331820:CDS
GATATTGAGGTTATTAGAGA+TGG 0.601302 8_4:-51486562 Msa1331820:CDS
ATATTATCTGTAACAGAAAG+GGG 0.602322 8_4:+51490938 None:intergenic
TATGGATTGACACCATTAGA+GGG 0.602501 8_4:+51486484 None:intergenic
TAGTTGTCCTGAAAAGGGTG+AGG 0.602708 8_4:-51486701 Msa1331820:CDS
CTTGGTAGTTCTCAAAGGCG+GGG 0.603468 8_4:-51489307 Msa1331820:CDS
TTGTCCACAAGGACTGCTGA+AGG 0.603513 8_4:+51490156 None:intergenic
GTCAAATTCCTATTAGAACA+TGG 0.604229 8_4:-51487135 Msa1331820:CDS
TTTGAAGTTTAGAACAGACT+CGG 0.605753 8_4:-51489778 Msa1331820:CDS
TTGATTTCAGATTGTCGGTG+AGG 0.610033 8_4:-51489197 Msa1331820:intron
ATGAATCTGACAATAATGGA+AGG 0.612082 8_4:-51488761 Msa1331820:CDS
TTGAACAATATTCAAGAAGG+TGG 0.612304 8_4:+51489069 None:intergenic
ATCATGATCCAGCAAAGACA+TGG 0.613607 8_4:-51490202 Msa1331820:CDS
GCTGAACGATCCAATTATGG+AGG 0.619540 8_4:-51488913 Msa1331820:CDS
TGATGGAAATGTAGCACTGT+GGG 0.620949 8_4:-51487382 Msa1331820:CDS
AGAACATGTTAGCTCGCGGT+AGG 0.621813 8_4:-51488872 Msa1331820:CDS
ATAATGTCAGCGGCAACCAA+AGG 0.622201 8_4:-51486811 Msa1331820:CDS
AACGATTAAGTCAACTGTTG+AGG 0.627952 8_4:-51489102 Msa1331820:CDS
GACTGCCACGTGTAACGCCG+TGG 0.630842 8_4:+51487179 None:intergenic
TGGAACCACGGCGTTACACG+TGG 0.632497 8_4:-51487184 Msa1331820:CDS
AGCATTTGATCTTGTAGACG+AGG 0.634274 8_4:+51489813 None:intergenic
AAGTTTAGAACAGACTCGGA+GGG 0.635693 8_4:-51489774 Msa1331820:CDS
TTTCTGTGCCTATTCCTGAG+AGG 0.644101 8_4:-51486984 Msa1331820:CDS
GTTCACTTGTAAATCTACCA+AGG 0.647208 8_4:+51486941 None:intergenic
CTGAACGATCCAATTATGGA+GGG 0.648177 8_4:-51488912 Msa1331820:CDS
GACTTGGTAGTTCTCAAAGG+CGG 0.651153 8_4:-51489309 Msa1331820:CDS
TGCTGGATCATGATAACGCG+CGG 0.652027 8_4:+51490211 None:intergenic
ATTTGATCTTGTAGACGAGG+AGG 0.661387 8_4:+51489816 None:intergenic
TCATAAGGAGATATAATGAG+AGG 0.668306 8_4:+51492836 None:intergenic
CAAGACATTATGCGATACGG+TGG 0.671228 8_4:-51487234 Msa1331820:CDS
CGTGGATCCAAAATCGACCA+AGG 0.677430 8_4:-51486870 Msa1331820:CDS
TTACAACAATTGTTAAAACG+AGG 0.677794 8_4:-51488795 Msa1331820:CDS
AGAGATTTAGCTGACCAACA+AGG 0.679515 8_4:-51487072 Msa1331820:CDS
ACTCTTCGGGATAATGTCAG+CGG 0.680608 8_4:-51486821 Msa1331820:CDS
TATACACAACCAATGTAACA+AGG 0.681551 8_4:+51491011 None:intergenic
GAAGTTTAGAACAGACTCGG+AGG 0.683148 8_4:-51489775 Msa1331820:CDS
TGTCACATATCTTGTCCACA+AGG 0.685180 8_4:+51490145 None:intergenic
TGGAAATGTAGCACTGTGGG+AGG 0.700302 8_4:-51487379 Msa1331820:CDS
AACATCACCAATTTGCAAGG+TGG 0.702928 8_4:+51487305 None:intergenic
GTGCTTCCAATGACTATGTG+TGG 0.703839 8_4:-51492962 Msa1331820:CDS
ACAGAGAACATGTTAGCTCG+CGG 0.707706 8_4:-51488876 Msa1331820:CDS
CTGATGGAAATGTAGCACTG+TGG 0.749084 8_4:-51487383 Msa1331820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTAAAAAATAAATATT+TGG - chr8_4:51491129-51491148 Msa1331820:intron 0.0%
!! TAAAAAAATCTTATATTCAA+CGG + chr8_4:51487796-51487815 None:intergenic 10.0%
!!! GTTAAATAATTTAAACTTTT+TGG - chr8_4:51488352-51488371 Msa1331820:intron 10.0%
!! ACTATTTAATTAATTATTCT+TGG - chr8_4:51490883-51490902 Msa1331820:CDS 10.0%
!!! ACCAATAATTTTATAATAAA+GGG + chr8_4:51491616-51491635 None:intergenic 10.0%
!!! AAAATAAAATAAGTTGATTA+TGG - chr8_4:51491987-51492006 Msa1331820:intron 10.0%
!!! TTTTTTTCTGTTTTAGTATA+AGG + chr8_4:51487309-51487328 None:intergenic 15.0%
!!! AACAAACACAATTTTTAAAT+GGG + chr8_4:51487437-51487456 None:intergenic 15.0%
!!! AAACAAACACAATTTTTAAA+TGG + chr8_4:51487438-51487457 None:intergenic 15.0%
!!! TTTATTTTTTTACTCTTCAA+AGG - chr8_4:51487470-51487489 Msa1331820:intron 15.0%
!! AAAAAAATCTTATATTCAAC+GGG + chr8_4:51487795-51487814 None:intergenic 15.0%
!!! GTTGAATATAAGATTTTTTT+AGG - chr8_4:51487795-51487814 Msa1331820:intron 15.0%
!! TGTACAATATTCAATTAAAT+TGG + chr8_4:51488129-51488148 None:intergenic 15.0%
!!! TTATTTTTAAATATTGATCG+TGG - chr8_4:51488156-51488175 Msa1331820:intron 15.0%
!! AATTTATCTTCATTCTTAAA+AGG + chr8_4:51489087-51489106 None:intergenic 15.0%
!! TAGATTTCAAATTAGTAATT+TGG + chr8_4:51490006-51490025 None:intergenic 15.0%
!!! TTTACTTCTTCAAATAATTT+TGG - chr8_4:51490928-51490947 Msa1331820:CDS 15.0%
!! TCATAATAATATACAATACA+TGG - chr8_4:51490951-51490970 Msa1331820:CDS 15.0%
!!! ATTTTAAAAAATTCTTTCTG+TGG - chr8_4:51491293-51491312 Msa1331820:intron 15.0%
!! AACTAAATAAACTTACAAAA+TGG - chr8_4:51491354-51491373 Msa1331820:intron 15.0%
!! TTAATAATTCATAAGTTCAT+TGG + chr8_4:51491393-51491412 None:intergenic 15.0%
!! ACTTATGAATTATTAATCTT+TGG - chr8_4:51491397-51491416 Msa1331820:intron 15.0%
!! TAGATAAACAAAATAATACA+AGG + chr8_4:51491432-51491451 None:intergenic 15.0%
!!! ATAATTTTATAATAAAGGGA+AGG + chr8_4:51491612-51491631 None:intergenic 15.0%
!! TCCCTTTATTATAAAATTAT+TGG - chr8_4:51491612-51491631 Msa1331820:intron 15.0%
!!! GACCAATAATTTTATAATAA+AGG + chr8_4:51491617-51491636 None:intergenic 15.0%
!! AAGTTACTAGAACATAAAAA+TGG - chr8_4:51486426-51486445 Msa1331820:three_prime_UTR 20.0%
!!! TTTTTAAGAAACACAATGAA+TGG - chr8_4:51486799-51486818 Msa1331820:CDS 20.0%
!! GAAAAAATAATGTGAAATAC+TGG + chr8_4:51486876-51486895 None:intergenic 20.0%
!!! TTTATTGAATTTTTTCTTCC+TGG - chr8_4:51487039-51487058 Msa1331820:CDS 20.0%
!! TATTCTCTTGAAAATACTTA+TGG - chr8_4:51487208-51487227 Msa1331820:CDS 20.0%
!! CTAAAACAGAAAAAAAAATC+TGG - chr8_4:51487313-51487332 Msa1331820:CDS 20.0%
!! AAAACAAAGTCAAACTTTAT+AGG + chr8_4:51487530-51487549 None:intergenic 20.0%
!!! TGAGTTTTGTCATTATTTAT+AGG + chr8_4:51487823-51487842 None:intergenic 20.0%
!! TAAAACATCCTTAAATCATT+AGG + chr8_4:51487850-51487869 None:intergenic 20.0%
!! AATATTATCTGTAACAGAAA+GGG + chr8_4:51488476-51488495 None:intergenic 20.0%
!!! ACAGAAACTATAACTATTTT+TGG - chr8_4:51489008-51489027 Msa1331820:intron 20.0%
!!! CAGAAACTATAACTATTTTT+GGG - chr8_4:51489009-51489028 Msa1331820:intron 20.0%
!! TAAATTAGATGTAAATGAGA+TGG - chr8_4:51489101-51489120 Msa1331820:CDS 20.0%
!! TAACTAACAATAACAAGTTA+GGG + chr8_4:51489812-51489831 None:intergenic 20.0%
!!! ACTAATTTGAAATCTAAATG+CGG - chr8_4:51490010-51490029 Msa1331820:CDS 20.0%
!!! ATATAAACTGAAGTTTTTTG+TGG - chr8_4:51490055-51490074 Msa1331820:CDS 20.0%
!! TTCTAATAAATCTATTTGAC+AGG - chr8_4:51490079-51490098 Msa1331820:CDS 20.0%
!! TATGAACTAAATCTAAACAT+TGG - chr8_4:51490187-51490206 Msa1331820:CDS 20.0%
!!! TTTTACTTCTGTTAGATTAT+GGG - chr8_4:51490803-51490822 Msa1331820:CDS 20.0%
!! ATGAATAAGAATATGGATAA+AGG + chr8_4:51490909-51490928 None:intergenic 20.0%
!! GAAGTAAATGAATAAGAATA+TGG + chr8_4:51490916-51490935 None:intergenic 20.0%
!! ACATCAGCATAAAAATAATA+AGG + chr8_4:51491155-51491174 None:intergenic 20.0%
!! AAGTCAACTAAGAAAATAAA+TGG + chr8_4:51491187-51491206 None:intergenic 20.0%
!!! TTTAGTAATTTTTGTGATGT+TGG - chr8_4:51491758-51491777 Msa1331820:intron 20.0%
!!! TTAGTAATTTTTGTGATGTT+GGG - chr8_4:51491759-51491778 Msa1331820:intron 20.0%
!!! TATAAACATTTCTTTTCATG+AGG - chr8_4:51491901-51491920 Msa1331820:intron 20.0%
!! ATTGACAAACAAGATAAATA+TGG - chr8_4:51492305-51492324 Msa1331820:intron 20.0%
!! TTTAAAGAGTTACTTGAAAT+TGG - chr8_4:51492764-51492783 Msa1331820:intron 20.0%
!! TCAAATATGTCAATTATCAT+TGG + chr8_4:51492986-51493005 None:intergenic 20.0%
! GGAAAAAAAAGATTCATACA+AGG - chr8_4:51486400-51486419 Msa1331820:three_prime_UTR 25.0%
!! TTGATAATTCAAGTTCTTCT+TGG + chr8_4:51486474-51486493 None:intergenic 25.0%
! AGAAAGAAGAAAACAATCAA+CGG + chr8_4:51486764-51486783 None:intergenic 25.0%
! CAAAGAATAGAATAAAAGAG+AGG + chr8_4:51487066-51487085 None:intergenic 25.0%
!!! TTGTTTGTTTTGTTACTCTT+TGG - chr8_4:51487245-51487264 Msa1331820:CDS 25.0%
! TCATTAAGAAGAGATATTGT+TGG + chr8_4:51487280-51487299 None:intergenic 25.0%
!!! TTTTCTGTTTTAGTATAAGG+CGG + chr8_4:51487306-51487325 None:intergenic 25.0%
!!! ACACAATTTTTAAATGGGTT+GGG + chr8_4:51487432-51487451 None:intergenic 25.0%
!! AACACAATTTTTAAATGGGT+TGG + chr8_4:51487433-51487452 None:intergenic 25.0%
! TAACGAAAGAAATTTGATGT+TGG - chr8_4:51487609-51487628 Msa1331820:intron 25.0%
! TGCTTTCAATTCAATGTAAT+CGG - chr8_4:51487905-51487924 Msa1331820:intron 25.0%
! GTTCAATAAGATGAGAAATA+GGG + chr8_4:51488290-51488309 None:intergenic 25.0%
! TGTTCAATAAGATGAGAAAT+AGG + chr8_4:51488291-51488310 None:intergenic 25.0%
! TTAAGGAATCCAAATTCAAA+TGG + chr8_4:51488439-51488458 None:intergenic 25.0%
! ATATTATCTGTAACAGAAAG+GGG + chr8_4:51488475-51488494 None:intergenic 25.0%
! CAATATTATCTGTAACAGAA+AGG + chr8_4:51488477-51488496 None:intergenic 25.0%
! GTTACAGATAATATTGTCAA+TGG - chr8_4:51488481-51488500 Msa1331820:intron 25.0%
!!! ACTATAACTATTTTTGGGTT+CGG - chr8_4:51489014-51489033 Msa1331820:intron 25.0%
!! ATAATCTGAATGATTTTCAC+AGG - chr8_4:51489128-51489147 Msa1331820:CDS 25.0%
!! TTTTACATGCTCTTTAATCT+AGG - chr8_4:51489375-51489394 Msa1331820:intron 25.0%
!! TTATCTTTTCTATTCTCTGA+TGG - chr8_4:51489719-51489738 Msa1331820:CDS 25.0%
! GATAAGGTTTACTTATTCAA+GGG - chr8_4:51489741-51489760 Msa1331820:CDS 25.0%
! ATAAGGTTTACTTATTCAAG+GGG - chr8_4:51489742-51489761 Msa1331820:CDS 25.0%
!!! AAATGATTTGCTCTTTCAAT+TGG - chr8_4:51489770-51489789 Msa1331820:CDS 25.0%
! GTAACTAACAATAACAAGTT+AGG + chr8_4:51489813-51489832 None:intergenic 25.0%
! TGTAAGATAACATCTTCTTT+AGG + chr8_4:51489929-51489948 None:intergenic 25.0%
! ACTAGAATGTAAAAATCAGT+TGG + chr8_4:51489962-51489981 None:intergenic 25.0%
! TTTACAACTTAATGCATGAT+AGG - chr8_4:51490143-51490162 Msa1331820:CDS 25.0%
! AATATTGTTCAAGCTAATGT+TGG - chr8_4:51490352-51490371 Msa1331820:intron 25.0%
! AAGAAGGTTATTCATGATTA+TGG + chr8_4:51490386-51490405 None:intergenic 25.0%
! ATATTATACAAACCTGAAGA+AGG + chr8_4:51490402-51490421 None:intergenic 25.0%
! TGTTGACATGTTTATGTATT+TGG - chr8_4:51490439-51490458 Msa1331820:CDS 25.0%
! TTACAACAATTGTTAAAACG+AGG - chr8_4:51490615-51490634 Msa1331820:intron 25.0%
!! GTTTTACTTCTGTTAGATTA+TGG - chr8_4:51490802-51490821 Msa1331820:CDS 25.0%
! TTTACTTCTGTTAGATTATG+GGG - chr8_4:51490804-51490823 Msa1331820:CDS 25.0%
!! ATTATTGCCAAGTCATATTT+TGG - chr8_4:51491023-51491042 Msa1331820:CDS 25.0%
!! TGACTTATCTTTTCCATATT+AGG - chr8_4:51491201-51491220 Msa1331820:intron 25.0%
! TCATTAAATTCAACGTGTAT+TGG + chr8_4:51491488-51491507 None:intergenic 25.0%
!! AGAATTTTATAGGGAAAAAG+AGG + chr8_4:51491728-51491747 None:intergenic 25.0%
! TATCAAATTACTACTTCATC+AGG + chr8_4:51491962-51491981 None:intergenic 25.0%
!! TGAATCAGTAACAAAACTTT+TGG - chr8_4:51492070-51492089 Msa1331820:intron 25.0%
! ACAAACAAGATAAATATGGT+TGG - chr8_4:51492309-51492328 Msa1331820:intron 25.0%
! AACTTTCATAATTCACTCTT+CGG - chr8_4:51492575-51492594 Msa1331820:intron 25.0%
! TCATTTGAACACTGAAAAAT+TGG + chr8_4:51492634-51492653 None:intergenic 25.0%
! TTCAAATGAATAACAATGCA+AGG - chr8_4:51492645-51492664 Msa1331820:intron 25.0%
!!! AGTAACTCTTTAAAACTTTC+AGG + chr8_4:51492758-51492777 None:intergenic 25.0%
! GAAATTGGATCTAAGAAATT+TGG - chr8_4:51492779-51492798 Msa1331820:intron 25.0%
! ATTATCGTAAGTACACATTA+TGG + chr8_4:51492947-51492966 None:intergenic 25.0%
GAACTTGAATTATCAAGAGA+TGG - chr8_4:51486478-51486497 Msa1331820:exon 30.0%
TCATAAGGAGATATAATGAG+AGG + chr8_4:51486577-51486596 None:intergenic 30.0%
ATAAACAGAGAAGGAATTAC+CGG + chr8_4:51486609-51486628 None:intergenic 30.0%
GAAAAAAGGATAAACAGAGA+AGG + chr8_4:51486618-51486637 None:intergenic 30.0%
!!! TATCCTTTTTTCAACGTTCT+TGG - chr8_4:51486626-51486645 Msa1331820:CDS 30.0%
TTACCAAGAACGTTGAAAAA+AGG + chr8_4:51486632-51486651 None:intergenic 30.0%
GAAAGAAGAAAACAATCAAC+GGG + chr8_4:51486763-51486782 None:intergenic 30.0%
TGAAGATGGAATTTCTTGAA+TGG + chr8_4:51487092-51487111 None:intergenic 30.0%
TTCAAGAAATTCCATCTTCA+CGG - chr8_4:51487092-51487111 Msa1331820:CDS 30.0%
!!! TTTCTGTTTTAGTATAAGGC+GGG + chr8_4:51487305-51487324 None:intergenic 30.0%
! AGAAACACGTGTAAACTTTT+TGG + chr8_4:51487501-51487520 None:intergenic 30.0%
!!! TGACTTTGTTTTCCTTGTAT+AGG - chr8_4:51487538-51487557 Msa1331820:intron 30.0%
AGAAACAAAACGGGTAATTT+AGG + chr8_4:51487651-51487670 None:intergenic 30.0%
!!! AAATTACCCGTTTTGTTTCT+TGG - chr8_4:51487651-51487670 Msa1331820:intron 30.0%
TACATAGCCAAGAAACAAAA+CGG + chr8_4:51487661-51487680 None:intergenic 30.0%
! CATGTCAATTTGTTTAACTG+CGG - chr8_4:51487739-51487758 Msa1331820:intron 30.0%
CTCATACACCTAATGATTTA+AGG - chr8_4:51487839-51487858 Msa1331820:intron 30.0%
TTTAAATATTGATCGTGGAG+CGG - chr8_4:51488161-51488180 Msa1331820:intron 30.0%
!! TTAAACTTTTTGGCATTTGC+AGG - chr8_4:51488362-51488381 Msa1331820:intron 30.0%
TATACACAACCAATGTAACA+AGG + chr8_4:51488402-51488421 None:intergenic 30.0%
!! TATAGTTCTAACCTTCTTTG+TGG - chr8_4:51488519-51488538 Msa1331820:intron 30.0%
! ATTTCCAAGCAATCTGTTTT+GGG + chr8_4:51488582-51488601 None:intergenic 30.0%
! TATTTCCAAGCAATCTGTTT+TGG + chr8_4:51488583-51488602 None:intergenic 30.0%
TTTGTAGCTTCACAAAATCA+CGG - chr8_4:51488849-51488868 Msa1331820:CDS 30.0%
GATATGTGACAACTATATAC+TGG - chr8_4:51489277-51489296 Msa1331820:intron 30.0%
! TTTGAAGTTTAGAACAGACT+CGG - chr8_4:51489632-51489651 Msa1331820:intron 30.0%
! TTTCTATTCTCTGATGGATA+AGG - chr8_4:51489725-51489744 Msa1331820:CDS 30.0%
GGATAAGGTTTACTTATTCA+AGG - chr8_4:51489740-51489759 Msa1331820:CDS 30.0%
TAAGGTTTACTTATTCAAGG+GGG - chr8_4:51489743-51489762 Msa1331820:CDS 30.0%
AATAACAAGTTAGGGCTAAA+AGG + chr8_4:51489804-51489823 None:intergenic 30.0%
TTGCTCGATTCAACTATAAA+AGG - chr8_4:51489874-51489893 Msa1331820:intron 30.0%
AAGATAACATCTTCTTTAGG+TGG + chr8_4:51489926-51489945 None:intergenic 30.0%
! GATTTTTACATTCTAGTCAC+TGG - chr8_4:51489965-51489984 Msa1331820:CDS 30.0%
TAAATCTATTTGACAGGACT+TGG - chr8_4:51490085-51490104 Msa1331820:CDS 30.0%
! GGTAATTGATTTCAGATTGT+CGG - chr8_4:51490208-51490227 Msa1331820:CDS 30.0%
GTTCTAACTGTAAAATGTTG+TGG + chr8_4:51490286-51490305 None:intergenic 30.0%
TTGAACAATATTCAAGAAGG+TGG + chr8_4:51490344-51490363 None:intergenic 30.0%
AGCTTGAACAATATTCAAGA+AGG + chr8_4:51490347-51490366 None:intergenic 30.0%
AATCATGAATAACCTTCTTC+AGG - chr8_4:51490387-51490406 Msa1331820:CDS 30.0%
ACAATTGTTAAAACGAGGTT+TGG - chr8_4:51490620-51490639 Msa1331820:intron 30.0%
CCATTATTGTCAGATTCATT+TGG + chr8_4:51490648-51490667 None:intergenic 30.0%
CCAAATGAATCTGACAATAA+TGG - chr8_4:51490645-51490664 Msa1331820:intron 30.0%
! ATGAATCTGACAATAATGGA+AGG - chr8_4:51490649-51490668 Msa1331820:intron 30.0%
GAATATTTACCTCTAACGTT+GGG + chr8_4:51490835-51490854 None:intergenic 30.0%
TGAATATTTACCTCTAACGT+TGG + chr8_4:51490836-51490855 None:intergenic 30.0%
!!! CTGTCTCTAAACTTCTTTTT+TGG - chr8_4:51490856-51490875 Msa1331820:CDS 30.0%
AAGAAACCAAATGCTTACTA+AGG + chr8_4:51491053-51491072 None:intergenic 30.0%
!!! GCAGAAGTAGAAGTTTTTTT+TGG + chr8_4:51491109-51491128 None:intergenic 30.0%
!! TAAGTGTTGACTTCCTAATA+TGG + chr8_4:51491217-51491236 None:intergenic 30.0%
TAATCATGTTGTACTCAATG+AGG - chr8_4:51491256-51491275 Msa1331820:intron 30.0%
AATGTTCTACTAACAAGAGA+TGG - chr8_4:51491670-51491689 Msa1331820:intron 30.0%
! AAAAGAGGTATGAATAAGTC+TGG + chr8_4:51491713-51491732 None:intergenic 30.0%
AATTTACTTGCAGATTCTGA+TGG - chr8_4:51492011-51492030 Msa1331820:intron 30.0%
! ACAAAACTTTTGGCAGAAAA+TGG - chr8_4:51492080-51492099 Msa1331820:intron 30.0%
GTCAAATTCCTATTAGAACA+TGG - chr8_4:51492275-51492294 Msa1331820:intron 30.0%
!!! AAAGCTATTTTTGAAGCCAA+AGG - chr8_4:51492374-51492393 Msa1331820:intron 30.0%
CTTACTATTATCTTCTCCTT+TGG + chr8_4:51492393-51492412 None:intergenic 30.0%
AAGTTATTATTCTTACGCCT+TGG + chr8_4:51492560-51492579 None:intergenic 30.0%
ACTTTCATAATTCACTCTTC+GGG - chr8_4:51492576-51492595 Msa1331820:intron 30.0%
!! AAATTGGTCATTTTCTCCTT+TGG + chr8_4:51492618-51492637 None:intergenic 30.0%
ATGAATAACAATGCAAGGAA+TGG - chr8_4:51492650-51492669 Msa1331820:intron 30.0%
AACAATTAGTTGTCCTGAAA+AGG - chr8_4:51492703-51492722 Msa1331820:intron 30.0%
ACAATTAGTTGTCCTGAAAA+GGG - chr8_4:51492704-51492723 Msa1331820:intron 30.0%
ATTTGGTATAGTTGCTACAA+AGG - chr8_4:51492796-51492815 Msa1331820:intron 30.0%
! AGCTGAAATTGATGATATTG+AGG - chr8_4:51492835-51492854 Msa1331820:CDS 30.0%
GATATTGAGGTTATTAGAGA+TGG - chr8_4:51492848-51492867 Msa1331820:CDS 30.0%
TATCATTGGATATATGAAGC+AGG + chr8_4:51492972-51492991 None:intergenic 30.0%
! TTTTGATAGGCATGTTTAGG+CGG + chr8_4:51486361-51486380 None:intergenic 35.0%
!! TGTTAGTACACGGTTTTGAT+AGG + chr8_4:51486374-51486393 None:intergenic 35.0%
TTCCAGTAGTTGTTAGTACA+CGG + chr8_4:51486384-51486403 None:intergenic 35.0%
ACCAAGAGAAGGTAATATTC+CGG + chr8_4:51486524-51486543 None:intergenic 35.0%
TTCAACCGAGTTTCAAATCT+TGG - chr8_4:51486704-51486723 Msa1331820:CDS 35.0%
! TCCAACCAAGATTTGAAACT+CGG + chr8_4:51486712-51486731 None:intergenic 35.0%
!! TTCTGTTGCTTTGTTTCTGA+CGG - chr8_4:51486947-51486966 Msa1331820:CDS 35.0%
ATAGAATAAAAGAGAGGACC+AGG + chr8_4:51487060-51487079 None:intergenic 35.0%
!!! TTCTGTTTTAGTATAAGGCG+GGG + chr8_4:51487304-51487323 None:intergenic 35.0%
! TCTTGGTTGTTTCCTATACA+AGG + chr8_4:51487553-51487572 None:intergenic 35.0%
ATAGGAAACAACCAAGAAGT+TGG - chr8_4:51487556-51487575 Msa1331820:intron 35.0%
!!! TTGGTGGTGTGTTTTAATGA+TGG - chr8_4:51487575-51487594 Msa1331820:intron 35.0%
ACATAGCCAAGAAACAAAAC+GGG + chr8_4:51487660-51487679 None:intergenic 35.0%
! AATGGAGATGATGAGCATTT+TGG - chr8_4:51488223-51488242 Msa1331820:intron 35.0%
!! TTTTTGGCATTTGCAGGATA+TGG - chr8_4:51488368-51488387 Msa1331820:intron 35.0%
! TTTTGGCATTTGCAGGATAT+GGG - chr8_4:51488369-51488388 Msa1331820:intron 35.0%
GGAAACTTTCCTTGTTACAT+TGG - chr8_4:51488390-51488409 Msa1331820:intron 35.0%
ATTGGTTGTGTATACTGCTT+GGG - chr8_4:51488408-51488427 Msa1331820:intron 35.0%
TGGGTATCTCCATTTGAATT+TGG - chr8_4:51488427-51488446 Msa1331820:intron 35.0%
!!! ACAAATAGGTAGTTTTGTCC+AGG + chr8_4:51488549-51488568 None:intergenic 35.0%
TGGGTTATCTACGAACAAAT+AGG + chr8_4:51488563-51488582 None:intergenic 35.0%
ATAACCCAAAACAGATTGCT+TGG - chr8_4:51488575-51488594 Msa1331820:intron 35.0%
CTTGGAAATATGCAAGAACT+TGG - chr8_4:51488593-51488612 Msa1331820:CDS 35.0%
AAAGCCTAAGCATGTTGAAT+AGG + chr8_4:51488696-51488715 None:intergenic 35.0%
TATTCAACATGCTTAGGCTT+TGG - chr8_4:51488695-51488714 Msa1331820:intron 35.0%
AGATTGAAACTTGACAGCTT+TGG - chr8_4:51488753-51488772 Msa1331820:CDS 35.0%
!!! ATGTTGTTTTCTTTGAGCCT+AGG - chr8_4:51488975-51488994 Msa1331820:intron 35.0%
AACTGTTGTCAAAGTAGTGA+TGG + chr8_4:51489304-51489323 None:intergenic 35.0%
ATCACTACTTTGACAACAGT+TGG - chr8_4:51489303-51489322 Msa1331820:CDS 35.0%
ACTTTGACAACAGTTGGTTA+TGG - chr8_4:51489309-51489328 Msa1331820:CDS 35.0%
GGATTAACAGCATATCTGAT+TGG - chr8_4:51489396-51489415 Msa1331820:intron 35.0%
ATGACTAACTTAGTTGTCCA+TGG - chr8_4:51489423-51489442 Msa1331820:intron 35.0%
TTGTTTGTGACAAATCTCAG+AGG - chr8_4:51489526-51489545 Msa1331820:intron 35.0%
TGTTTGTGACAAATCTCAGA+GGG - chr8_4:51489527-51489546 Msa1331820:intron 35.0%
AAAACTTGATGCAGCTTGTA+TGG + chr8_4:51489556-51489575 None:intergenic 35.0%
ATGTGAAATGCTTGATCTGA+TGG + chr8_4:51489700-51489719 None:intergenic 35.0%
TCTTTAGGTGGAAAATACTC+CGG + chr8_4:51489914-51489933 None:intergenic 35.0%
! CAACAGTTGACTTAATCGTT+TGG + chr8_4:51490308-51490327 None:intergenic 35.0%
AACGATTAAGTCAACTGTTG+AGG - chr8_4:51490308-51490327 Msa1331820:intron 35.0%
CAATATTCAAGAAGGTGGTA+CGG + chr8_4:51490339-51490358 None:intergenic 35.0%
AGGACTTCCAAAATATGACT+TGG + chr8_4:51491033-51491052 None:intergenic 35.0%
GTTTATCTAGACTATACCAC+CGG - chr8_4:51491443-51491462 Msa1331820:intron 35.0%
TTGGTAAATGCCACTACTAA+AGG + chr8_4:51491469-51491488 None:intergenic 35.0%
CTAAGTCAACACTAGTACAT+GGG + chr8_4:51491868-51491887 None:intergenic 35.0%
TCTAAGTCAACACTAGTACA+TGG + chr8_4:51491869-51491888 None:intergenic 35.0%
TTGCAAGACATTATGCGATA+CGG - chr8_4:51492173-51492192 Msa1331820:intron 35.0%
GACAATTTCAACACTGTCTT+CGG + chr8_4:51492258-51492277 None:intergenic 35.0%
TGTTAGCACCATGTTCTAAT+AGG + chr8_4:51492286-51492305 None:intergenic 35.0%
TGATTTCTGTATGTCCTTGT+TGG + chr8_4:51492355-51492374 None:intergenic 35.0%
! GATAGTAAAGTAAGGTACCT+TGG - chr8_4:51492452-51492471 Msa1331820:intron 35.0%
GTTCACTTGTAAATCTACCA+AGG + chr8_4:51492472-51492491 None:intergenic 35.0%
GAACCATCATTTCCATGAAA+TGG + chr8_4:51492521-51492540 None:intergenic 35.0%
CAACTAATTGTTACTCTGGT+TGG + chr8_4:51492695-51492714 None:intergenic 35.0%
AGGACAACTAATTGTTACTC+TGG + chr8_4:51492699-51492718 None:intergenic 35.0%
ACAAAGGTTGTTTGCAAAGA+TGG - chr8_4:51492812-51492831 Msa1331820:intron 35.0%
!!! GGTGATCATCTTGTTTTTGT+TGG - chr8_4:51492869-51492888 Msa1331820:CDS 35.0%
!!! CATCTTGTTTTTGTTGGTAC+TGG - chr8_4:51492875-51492894 Msa1331820:CDS 35.0%
!!! TTGTTTTTGTTGGTACTGGT+GGG - chr8_4:51492879-51492898 Msa1331820:CDS 35.0%
!! ATTAGAGGGTGTTGTACAAT+TGG + chr8_4:51492915-51492934 None:intergenic 35.0%
AATTGTACAACACCCTCTAA+TGG - chr8_4:51492914-51492933 Msa1331820:CDS 35.0%
! TATGGATTGACACCATTAGA+GGG + chr8_4:51492929-51492948 None:intergenic 35.0%
! TTATGGATTGACACCATTAG+AGG + chr8_4:51492930-51492949 None:intergenic 35.0%
!! CGGTTTTGATAGGCATGTTT+AGG + chr8_4:51486364-51486383 None:intergenic 40.0%
AACCGTGTACTAACAACTAC+TGG - chr8_4:51486379-51486398 Msa1331820:three_prime_UTR 40.0%
AGTCACTATAGTCTCACAAC+CGG - chr8_4:51486502-51486521 Msa1331820:CDS 40.0%
ACCGGAATATTACCTTCTCT+TGG - chr8_4:51486520-51486539 Msa1331820:CDS 40.0%
TTTAACTCTCCGGTTACTTC+TGG + chr8_4:51486548-51486567 None:intergenic 40.0%
ACCGAGTTTCAAATCTTGGT+TGG - chr8_4:51486708-51486727 Msa1331820:CDS 40.0%
GAGTTTCAAATCTTGGTTGG+AGG - chr8_4:51486711-51486730 Msa1331820:CDS 40.0%
TCTCAACTCTGTCACAAGAA+AGG + chr8_4:51486911-51486930 None:intergenic 40.0%
ATGTGAGAATTCCGTGAAGA+TGG + chr8_4:51487106-51487125 None:intergenic 40.0%
TCACGGAATTCTCACATAGA+AGG - chr8_4:51487109-51487128 Msa1331820:CDS 40.0%
AAAACACACCACCAACTTCT+TGG + chr8_4:51487570-51487589 None:intergenic 40.0%
TTGTTTAACTGCGGTTTGTG+AGG - chr8_4:51487748-51487767 Msa1331820:intron 40.0%
TGTTTAACTGCGGTTTGTGA+GGG - chr8_4:51487749-51487768 Msa1331820:intron 40.0%
TTTCCCTCATCCAATTCATG+CGG + chr8_4:51488006-51488025 None:intergenic 40.0%
! GAGATGATGAGCATTTTGGA+TGG - chr8_4:51488227-51488246 Msa1331820:intron 40.0%
! ATGATGAGCATTTTGGATGG+CGG - chr8_4:51488230-51488249 Msa1331820:intron 40.0%
AAATAGGGATGCCAATGAGA+CGG + chr8_4:51488275-51488294 None:intergenic 40.0%
! CATTGGTTGTGTATACTGCT+TGG - chr8_4:51488407-51488426 Msa1331820:intron 40.0%
! GGGGTTTTTGTGGTTTCTTA+AGG + chr8_4:51488456-51488475 None:intergenic 40.0%
! GTAACAGAAAGGGGTTTTTG+TGG + chr8_4:51488466-51488485 None:intergenic 40.0%
AACAAGCTCAGAAGGAATGA+TGG + chr8_4:51488638-51488657 None:intergenic 40.0%
ATATGTGCAACAAGCTCAGA+AGG + chr8_4:51488646-51488665 None:intergenic 40.0%
AATAGGCCATAGGTTTGCAT+AGG + chr8_4:51488679-51488698 None:intergenic 40.0%
AAGCATGTTGAATAGGCCAT+AGG + chr8_4:51488689-51488708 None:intergenic 40.0%
ATGGCCTATTCAACATGCTT+AGG - chr8_4:51488689-51488708 Msa1331820:intron 40.0%
! TTTTGCGGAAAACTTGTGAG+TGG + chr8_4:51488822-51488841 None:intergenic 40.0%
! GCTACAAAGTGTAGCTTTTG+CGG + chr8_4:51488837-51488856 None:intergenic 40.0%
ATCATGATCCAGCAAAGACA+TGG - chr8_4:51489208-51489227 Msa1331820:intron 40.0%
TGTCACATATCTTGTCCACA+AGG + chr8_4:51489268-51489287 None:intergenic 40.0%
TGGTTATGGAGATTTGCATC+CGG - chr8_4:51489323-51489342 Msa1331820:intron 40.0%
ATTTGCATCCGGTGAATGAA+AGG - chr8_4:51489334-51489353 Msa1331820:intron 40.0%
TTTGCATCCGGTGAATGAAA+GGG - chr8_4:51489335-51489354 Msa1331820:intron 40.0%
ATCATCTCCCTTTCATTCAC+CGG + chr8_4:51489345-51489364 None:intergenic 40.0%
! CTGCATCAAGTTTTGCTCAT+AGG - chr8_4:51489562-51489581 Msa1331820:intron 40.0%
ATTTGATCTTGTAGACGAGG+AGG + chr8_4:51489597-51489616 None:intergenic 40.0%
AGCATTTGATCTTGTAGACG+AGG + chr8_4:51489600-51489619 None:intergenic 40.0%
! AAGTTTAGAACAGACTCGGA+GGG - chr8_4:51489636-51489655 Msa1331820:intron 40.0%
ATGCTTGATCTGATGGCTTT+AGG + chr8_4:51489693-51489712 None:intergenic 40.0%
!! AAAGGTATCTGAGATGAAGC+CGG - chr8_4:51489892-51489911 Msa1331820:intron 40.0%
TTGATTTCAGATTGTCGGTG+AGG - chr8_4:51490213-51490232 Msa1331820:CDS 40.0%
! GTTCAAGCTAATGTTGGTGA+CGG - chr8_4:51490358-51490377 Msa1331820:intron 40.0%
AGAGCTGAACGATCCAATTA+TGG - chr8_4:51490494-51490513 Msa1331820:intron 40.0%
CTGAACGATCCAATTATGGA+GGG - chr8_4:51490498-51490517 Msa1331820:intron 40.0%
! TCCAATTATGGAGGGAGTTT+TGG - chr8_4:51490506-51490525 Msa1331820:intron 40.0%
ACCAAAACTCCCTCCATAAT+TGG + chr8_4:51490510-51490529 None:intergenic 40.0%
! CAATAATGGAAGGACAGCTT+TGG - chr8_4:51490659-51490678 Msa1331820:intron 40.0%
CAGCATATAGCAGCATGTAA+AGG - chr8_4:51490766-51490785 Msa1331820:CDS 40.0%
GGAAGTCCTTAGTAAGCATT+TGG - chr8_4:51491044-51491063 Msa1331820:intron 40.0%
TGTACTCAATGAGGAAGCAA+AGG - chr8_4:51491265-51491284 Msa1331820:intron 40.0%
TAAATGCCACTACTAAAGGC+CGG + chr8_4:51491465-51491484 None:intergenic 40.0%
ACTAACAAGAGATGGTCATG+TGG - chr8_4:51491678-51491697 Msa1331820:intron 40.0%
ACTACTTCATCAGGCATAGA+AGG + chr8_4:51491953-51491972 None:intergenic 40.0%
TGATGGAAATGTAGCACTGT+GGG - chr8_4:51492028-51492047 Msa1331820:intron 40.0%
AACATCACCAATTTGCAAGG+TGG + chr8_4:51492108-51492127 None:intergenic 40.0%
!! ACCTTGCAAATTGGTGATGT+TGG - chr8_4:51492107-51492126 Msa1331820:intron 40.0%
ACCAACATCACCAATTTGCA+AGG + chr8_4:51492111-51492130 None:intergenic 40.0%
! AAATAACAGCGTTGGAACCA+CGG - chr8_4:51492214-51492233 Msa1331820:intron 40.0%
TGTTGGTCAGCTAAATCTCT+TGG + chr8_4:51492338-51492357 None:intergenic 40.0%
AGAGATTTAGCTGACCAACA+AGG - chr8_4:51492338-51492357 Msa1331820:intron 40.0%
AGAGGCAGGATAGTAAAGTA+AGG - chr8_4:51492444-51492463 Msa1331820:intron 40.0%
GGACCATTTCATGGAAATGA+TGG - chr8_4:51492515-51492534 Msa1331820:intron 40.0%
TTCATGGAAATGATGGTTCG+TGG - chr8_4:51492522-51492541 Msa1331820:intron 40.0%
!!! CTTGTTTTTGTTGGTACTGG+TGG - chr8_4:51492878-51492897 Msa1331820:CDS 40.0%
!!! TGTTTTTGTTGGTACTGGTG+GGG - chr8_4:51492880-51492899 Msa1331820:CDS 40.0%
GTGCTTCCAATGACTATGTG+TGG - chr8_4:51486448-51486467 Msa1331820:three_prime_UTR 45.0%
TCTTGGCCACACATAGTCAT+TGG + chr8_4:51486457-51486476 None:intergenic 45.0%
TTACTTCTGGCACCAAGAGA+AGG + chr8_4:51486535-51486554 None:intergenic 45.0%
GAGGTCTGAGTTTAACTCTC+CGG + chr8_4:51486558-51486577 None:intergenic 45.0%
CTCCTTATGATCGTCGTTAC+CGG - chr8_4:51486587-51486606 Msa1331820:CDS 45.0%
TACCGGTAACGACGATCATA+AGG + chr8_4:51486592-51486611 None:intergenic 45.0%
GAAAACAATCAACGGGCGTT+GGG + chr8_4:51486756-51486775 None:intergenic 45.0%
AGAAAACAATCAACGGGCGT+TGG + chr8_4:51486757-51486776 None:intergenic 45.0%
GGAAACAACCAAGAAGTTGG+TGG - chr8_4:51487559-51487578 Msa1331820:intron 45.0%
TTCCCTCATCCAATTCATGC+GGG + chr8_4:51488005-51488024 None:intergenic 45.0%
AAAAGTCCCACAAGCTGGTT+TGG - chr8_4:51488023-51488042 Msa1331820:intron 45.0%
AAACCACCAAACCAGCTTGT+GGG + chr8_4:51488032-51488051 None:intergenic 45.0%
!! ACAAGCTGGTTTGGTGGTTT+GGG - chr8_4:51488032-51488051 Msa1331820:intron 45.0%
! TGATGAGCATTTTGGATGGC+GGG - chr8_4:51488231-51488250 Msa1331820:intron 45.0%
AATAGGGATGCCAATGAGAC+GGG + chr8_4:51488274-51488293 None:intergenic 45.0%
AACCTTCTTTGTGGCTTACC+TGG - chr8_4:51488528-51488547 Msa1331820:intron 45.0%
! GAGTCAGCGCTATGTTTTCT+CGG - chr8_4:51488728-51488747 Msa1331820:intron 45.0%
! TGACAGCTTTGGTGCATGTT+TGG - chr8_4:51488764-51488783 Msa1331820:CDS 45.0%
GTAGCTTCACAAAATCACGG+TGG - chr8_4:51488852-51488871 Msa1331820:CDS 45.0%
TTTCTGTCCTTCTCAAGCCT+AGG + chr8_4:51488995-51489014 None:intergenic 45.0%
GATCCAGCAAAGACATGGAT+TGG - chr8_4:51489213-51489232 Msa1331820:intron 45.0%
ATTTCCTTCAGCAGTCCTTG+TGG - chr8_4:51489250-51489269 Msa1331820:intron 45.0%
!! TTCTAGTTCGACTTGTGCCA+TGG + chr8_4:51489443-51489462 None:intergenic 45.0%
CTTGTAGACGAGGAGGTAAT+TGG + chr8_4:51489590-51489609 None:intergenic 45.0%
! GAAGTTTAGAACAGACTCGG+AGG - chr8_4:51489635-51489654 Msa1331820:intron 45.0%
! CAGGACTTGGTAGTTCTCAA+AGG - chr8_4:51490098-51490117 Msa1331820:CDS 45.0%
! GACTTGGTAGTTCTCAAAGG+CGG - chr8_4:51490101-51490120 Msa1331820:CDS 45.0%
! ACTTGGTAGTTCTCAAAGGC+GGG - chr8_4:51490102-51490121 Msa1331820:CDS 45.0%
GCGAAAACAGGAGAACTTTG+TGG - chr8_4:51490235-51490254 Msa1331820:CDS 45.0%
GCTGAACGATCCAATTATGG+AGG - chr8_4:51490497-51490516 Msa1331820:intron 45.0%
ACAGAGAACATGTTAGCTCG+CGG - chr8_4:51490534-51490553 Msa1331820:intron 45.0%
GCTGCAAAGCATAGACTTAC+TGG + chr8_4:51490573-51490592 None:intergenic 45.0%
CTATGCTTTGCAGCAGAAAG+AGG - chr8_4:51490579-51490598 Msa1331820:intron 45.0%
TTTGTGATGTTGGGTCGTCA+TGG - chr8_4:51491768-51491787 Msa1331820:intron 45.0%
! AGTACATGGGCTGTGCAATT+TGG + chr8_4:51491855-51491874 None:intergenic 45.0%
CTGATGGAAATGTAGCACTG+TGG - chr8_4:51492027-51492046 Msa1331820:intron 45.0%
!! AATGGTGCCACCTTGCAAAT+TGG - chr8_4:51492098-51492117 Msa1331820:intron 45.0%
CAAGACATTATGCGATACGG+TGG - chr8_4:51492176-51492195 Msa1331820:intron 45.0%
ACGCTTCCAAATAACAGCGT+TGG - chr8_4:51492206-51492225 Msa1331820:intron 45.0%
GTGGTTCCAACGCTGTTATT+TGG + chr8_4:51492215-51492234 None:intergenic 45.0%
TTTCTGTGCCTATTCCTGAG+AGG - chr8_4:51492426-51492445 Msa1331820:intron 45.0%
ACTTTACTATCCTGCCTCTC+AGG + chr8_4:51492443-51492462 None:intergenic 45.0%
! TCTTGAGGTGTAGGCATTGT+TGG + chr8_4:51492494-51492513 None:intergenic 45.0%
ACAATGCCTACACCTCAAGA+TGG - chr8_4:51492494-51492513 Msa1331820:intron 45.0%
AATGGTCCATCTTGAGGTGT+AGG + chr8_4:51492503-51492522 None:intergenic 45.0%
CCATGAAATGGTCCATCTTG+AGG + chr8_4:51492509-51492528 None:intergenic 45.0%
CCTCAAGATGGACCATTTCA+TGG - chr8_4:51492506-51492525 Msa1331820:intron 45.0%
!! TCTTACGCCTTGGTCGATTT+TGG + chr8_4:51492550-51492569 None:intergenic 45.0%
ACTCTTCGGGATAATGTCAG+CGG - chr8_4:51492589-51492608 Msa1331820:intron 45.0%
ATAATGTCAGCGGCAACCAA+AGG - chr8_4:51492599-51492618 Msa1331820:intron 45.0%
TAGTTGTCCTGAAAAGGGTG+AGG - chr8_4:51492709-51492728 Msa1331820:intron 45.0%
!!! TTTTAATTAAGAATTTTATA+GGG + chr8_4:51491737-51491756 None:intergenic 5.0%
!!! ATTTTAATTAAGAATTTTAT+AGG + chr8_4:51491738-51491757 None:intergenic 5.0%
!! CTCTTGGTGCCAGAAGTAAC+CGG - chr8_4:51486536-51486555 Msa1331820:CDS 50.0%
AAAACTCCTCGTCCCAACAG+CGG - chr8_4:51487943-51487962 Msa1331820:intron 50.0%
AAATGGGGCAATCCGCTGTT+GGG + chr8_4:51487958-51487977 None:intergenic 50.0%
!! AACAGCGGATTGCCCCATTT+GGG - chr8_4:51487958-51487977 Msa1331820:intron 50.0%
GGAAGTTTCCCCGCATGAAT+TGG - chr8_4:51487993-51488012 Msa1331820:intron 50.0%
TTCCCCGCATGAATTGGATG+AGG - chr8_4:51487999-51488018 Msa1331820:intron 50.0%
TCCCCGCATGAATTGGATGA+GGG - chr8_4:51488000-51488019 Msa1331820:intron 50.0%
TCCCTCATCCAATTCATGCG+GGG + chr8_4:51488004-51488023 None:intergenic 50.0%
CAAACCACCAAACCAGCTTG+TGG + chr8_4:51488033-51488052 None:intergenic 50.0%
!! CACAAGCTGGTTTGGTGGTT+TGG - chr8_4:51488031-51488050 Msa1331820:intron 50.0%
TATTGATCGTGGAGCGGAGA+CGG - chr8_4:51488167-51488186 Msa1331820:intron 50.0%
TAGGAGGAGAATACTCCCCA+AGG - chr8_4:51488195-51488214 Msa1331820:intron 50.0%
ATAGGGATGCCAATGAGACG+GGG + chr8_4:51488273-51488292 None:intergenic 50.0%
GTCCAGGTAAGCCACAAAGA+AGG + chr8_4:51488533-51488552 None:intergenic 50.0%
CCATAGGTTTGCATAGGAGC+AGG + chr8_4:51488673-51488692 None:intergenic 50.0%
CCTGCTCCTATGCAAACCTA+TGG - chr8_4:51488670-51488689 Msa1331820:intron 50.0%
CTTTGAGCCTAGGCTTGAGA+AGG - chr8_4:51488985-51489004 Msa1331820:intron 50.0%
!! CTATTTGCTGTGCACTGTGC+TGG - chr8_4:51489156-51489175 Msa1331820:CDS 50.0%
! TGCTGGATCATGATAACGCG+CGG + chr8_4:51489202-51489221 None:intergenic 50.0%
TCGCCAATCCATGTCTTTGC+TGG + chr8_4:51489219-51489238 None:intergenic 50.0%
TTGTCCACAAGGACTGCTGA+AGG + chr8_4:51489257-51489276 None:intergenic 50.0%
! CATTCTAGTCACTGGTGCTG+TGG - chr8_4:51489973-51489992 Msa1331820:CDS 50.0%
! CTTGGTAGTTCTCAAAGGCG+GGG - chr8_4:51490103-51490122 Msa1331820:CDS 50.0%
ATTGTCGGTGAGGCGAAAAC+AGG - chr8_4:51490223-51490242 Msa1331820:CDS 50.0%
GGAGAACTTTGTGGCGAGAT+TGG - chr8_4:51490244-51490263 Msa1331820:CDS 50.0%
AGAACATGTTAGCTCGCGGT+AGG - chr8_4:51490538-51490557 Msa1331820:intron 50.0%
! TGAAGCAACCCAGAAGCACA+TGG + chr8_4:51491321-51491340 None:intergenic 50.0%
ATACCACCGGCCTTTAGTAG+TGG - chr8_4:51491456-51491475 Msa1331820:intron 50.0%
TGGAAATGTAGCACTGTGGG+AGG - chr8_4:51492031-51492050 Msa1331820:intron 50.0%
CTATCCTGCCTCTCAGGAAT+AGG + chr8_4:51492437-51492456 None:intergenic 50.0%
CGTGGATCCAAAATCGACCA+AGG - chr8_4:51492540-51492559 Msa1331820:intron 50.0%
CTGAAAAGGGTGAGGTTGCT+GGG - chr8_4:51492717-51492736 Msa1331820:intron 50.0%
CAAATGGGGCAATCCGCTGT+TGG + chr8_4:51487959-51487978 None:intergenic 55.0%
!! CAACAGCGGATTGCCCCATT+TGG - chr8_4:51487957-51487976 Msa1331820:intron 55.0%
!! ACAGCGGATTGCCCCATTTG+GGG - chr8_4:51487959-51487978 Msa1331820:intron 55.0%
GAGGGAAAAGTCCCACAAGC+TGG - chr8_4:51488018-51488037 Msa1331820:intron 55.0%
!! AGTCCCACAAGCTGGTTTGG+TGG - chr8_4:51488026-51488045 Msa1331820:intron 55.0%
TGGAGCGGAGACGGAGATTT+AGG - chr8_4:51488176-51488195 Msa1331820:intron 55.0%
AGCGGAGACGGAGATTTAGG+AGG - chr8_4:51488179-51488198 Msa1331820:intron 55.0%
GAGGAGAATACTCCCCAAGG+CGG - chr8_4:51488198-51488217 Msa1331820:intron 55.0%
AGGAGAATACTCCCCAAGGC+GGG - chr8_4:51488199-51488218 Msa1331820:intron 55.0%
TCATCTCCATTCCCCGCCTT+GGG + chr8_4:51488214-51488233 None:intergenic 55.0%
ATCATCTCCATTCCCCGCCT+TGG + chr8_4:51488215-51488234 None:intergenic 55.0%
TCTCAAAGGCGGGGTTGAAC+AGG - chr8_4:51490112-51490131 Msa1331820:CDS 55.0%
CATGTTAGCTCGCGGTAGGA+TGG - chr8_4:51490542-51490561 Msa1331820:intron 55.0%
GGGGCAAATCCCAACGTTAG+AGG - chr8_4:51490823-51490842 Msa1331820:CDS 55.0%
TCTGTGGAGCCATGTGCTTC+TGG - chr8_4:51491309-51491328 Msa1331820:intron 55.0%
CTGTGGAGCCATGTGCTTCT+GGG - chr8_4:51491310-51491329 Msa1331820:intron 55.0%
ATGCCACTACTAAAGGCCGG+TGG + chr8_4:51491462-51491481 None:intergenic 55.0%
GCACTGTGGGAGGCTATACT+TGG - chr8_4:51492041-51492060 Msa1331820:intron 55.0%
CTGTGGGAGGCTATACTTGG+AGG - chr8_4:51492044-51492063 Msa1331820:intron 55.0%
TGTGCCTATTCCTGAGAGGC+AGG - chr8_4:51492430-51492449 Msa1331820:intron 55.0%
! CCAGCAACCTCACCCTTTTC+AGG + chr8_4:51492719-51492738 None:intergenic 55.0%
CCTGAAAAGGGTGAGGTTGC+TGG - chr8_4:51492716-51492735 Msa1331820:intron 55.0%
!! CAACGGGCGTTGGGTCTAAC+AGG + chr8_4:51486747-51486766 None:intergenic 60.0%
! TGCCCCATTTGGGGTCTCGT+TGG - chr8_4:51487968-51487987 Msa1331820:intron 60.0%
CGCCAACGAGACCCCAAATG+GGG + chr8_4:51487973-51487992 None:intergenic 60.0%
CCGCCAACGAGACCCCAAAT+GGG + chr8_4:51487974-51487993 None:intergenic 60.0%
! CCCATTTGGGGTCTCGTTGG+CGG - chr8_4:51487971-51487990 Msa1331820:intron 60.0%
! CCATTTGGGGTCTCGTTGGC+GGG - chr8_4:51487972-51487991 Msa1331820:intron 60.0%
GGAGAATACTCCCCAAGGCG+GGG - chr8_4:51488200-51488219 Msa1331820:intron 60.0%
ATACTCCCCAAGGCGGGGAA+TGG - chr8_4:51488205-51488224 Msa1331820:intron 60.0%
CATCTCCATTCCCCGCCTTG+GGG + chr8_4:51488213-51488232 None:intergenic 60.0%
ATGCCAATGAGACGGGGTGG+TGG + chr8_4:51488267-51488286 None:intergenic 60.0%
TGGAACCACGGCGTTACACG+TGG - chr8_4:51492226-51492245 Msa1331820:intron 60.0%
GGCAATCCGCTGTTGGGACG+AGG + chr8_4:51487952-51487971 None:intergenic 65.0%
CCCGCCAACGAGACCCCAAA+TGG + chr8_4:51487975-51487994 None:intergenic 65.0%
! CAATGAGACGGGGTGGTGGC+AGG + chr8_4:51488263-51488282 None:intergenic 65.0%
CTGCCACCACCCCGTCTCAT+TGG - chr8_4:51488261-51488280 Msa1331820:intron 65.0%
GGGATGCCAATGAGACGGGG+TGG + chr8_4:51488270-51488289 None:intergenic 65.0%
CTCGGAGGGCTTGCAGCAAC+AGG - chr8_4:51489650-51489669 Msa1331820:intron 65.0%
GACTGCCACGTGTAACGCCG+TGG + chr8_4:51492234-51492253 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 51486333 51493099 51486333 ID=Msa1331820;Name=Msa1331820
chr8_4 mRNA 51486333 51493099 51486333 ID=Msa1331820-mRNA-1;Parent=Msa1331820;Name=Msa1331820-mRNA-1;_AED=0.07;_eAED=0.07;_QI=112|0.8|0.72|1|1|1|11|150|878
chr8_4 exon 51486333 51487408 51486333 ID=Msa1331820-mRNA-1:exon:15276;Parent=Msa1331820-mRNA-1
chr8_4 exon 51488588 51488663 51488588 ID=Msa1331820-mRNA-1:exon:15275;Parent=Msa1331820-mRNA-1
chr8_4 exon 51488752 51488946 51488752 ID=Msa1331820-mRNA-1:exon:15274;Parent=Msa1331820-mRNA-1
chr8_4 exon 51489024 51489209 51489024 ID=Msa1331820-mRNA-1:exon:15273;Parent=Msa1331820-mRNA-1
chr8_4 exon 51489299 51489331 51489299 ID=Msa1331820-mRNA-1:exon:15272;Parent=Msa1331820-mRNA-1
chr8_4 exon 51489438 51489536 51489438 ID=Msa1331820-mRNA-1:exon:15271;Parent=Msa1331820-mRNA-1
chr8_4 exon 51489686 51489886 51489686 ID=Msa1331820-mRNA-1:exon:15270;Parent=Msa1331820-mRNA-1
chr8_4 exon 51489965 51490282 51489965 ID=Msa1331820-mRNA-1:exon:15269;Parent=Msa1331820-mRNA-1
chr8_4 exon 51490378 51490470 51490378 ID=Msa1331820-mRNA-1:exon:15268;Parent=Msa1331820-mRNA-1
chr8_4 exon 51490703 51491048 51490703 ID=Msa1331820-mRNA-1:exon:15267;Parent=Msa1331820-mRNA-1
chr8_4 exon 51492824 51493099 51492824 ID=Msa1331820-mRNA-1:exon:15266;Parent=Msa1331820-mRNA-1
chr8_4 five_prime_UTR 51492988 51493099 51492988 ID=Msa1331820-mRNA-1:five_prime_utr;Parent=Msa1331820-mRNA-1
chr8_4 CDS 51492824 51492987 51492824 ID=Msa1331820-mRNA-1:cds;Parent=Msa1331820-mRNA-1
chr8_4 CDS 51490703 51491048 51490703 ID=Msa1331820-mRNA-1:cds;Parent=Msa1331820-mRNA-1
chr8_4 CDS 51490378 51490470 51490378 ID=Msa1331820-mRNA-1:cds;Parent=Msa1331820-mRNA-1
chr8_4 CDS 51489965 51490282 51489965 ID=Msa1331820-mRNA-1:cds;Parent=Msa1331820-mRNA-1
chr8_4 CDS 51489686 51489886 51489686 ID=Msa1331820-mRNA-1:cds;Parent=Msa1331820-mRNA-1
chr8_4 CDS 51489438 51489536 51489438 ID=Msa1331820-mRNA-1:cds;Parent=Msa1331820-mRNA-1
chr8_4 CDS 51489299 51489331 51489299 ID=Msa1331820-mRNA-1:cds;Parent=Msa1331820-mRNA-1
chr8_4 CDS 51489024 51489209 51489024 ID=Msa1331820-mRNA-1:cds;Parent=Msa1331820-mRNA-1
chr8_4 CDS 51488752 51488946 51488752 ID=Msa1331820-mRNA-1:cds;Parent=Msa1331820-mRNA-1
chr8_4 CDS 51488588 51488663 51488588 ID=Msa1331820-mRNA-1:cds;Parent=Msa1331820-mRNA-1
chr8_4 CDS 51486483 51487408 51486483 ID=Msa1331820-mRNA-1:cds;Parent=Msa1331820-mRNA-1
chr8_4 three_prime_UTR 51486333 51486482 51486333 ID=Msa1331820-mRNA-1:three_prime_utr;Parent=Msa1331820-mRNA-1
Gene Sequence

>Msa1331820

ATGGTGCTTCCAATGACTATGTGTGGCCAAGAAGAACTTGAATTATCAAGAGATGGAAGTCACTATAGTCTCACAACCGGAATATTACCTTCTCTTGGTGCCAGAAGTAACCGGAGAGTTAAACTCAGACCTCTCATTATATCTCCTTATGATCGTCGTTACCGGATATGGGAAACTTTCCTTGTTACATTGGTTGTGTATACTGCTTGGGTATCTCCATTTGAATTTGGATTCCTTAAGAAACCACAAAAACCCCTTTCTGTTACAGATAATATTGTCAATGGATTCTTTGCTATAGATATAGTTCTAACCTTCTTTGTGGCTTACCTGGACAAAACTACCTATTTGTTCGTAGATAACCCAAAACAGATTGCTTGGAAATATGCAAGAACTTGGTTTGTACTTGATTTTATCTCCATCATTCCTTCTGAGCTTGTTGCACATATATCTCCTGCTCCTATGCAAACCTATGGCCTATTCAACATGCTTAGGCTTTGGCGTCTTCGTAGATTTATGACAGTAAATGTTGTTTTCTTTGAGCCTAGGCTTGAGAAGGACAGAAACTATAACTATTTTTGGGTTCGGTGTGCAAAGCTTATTTGTGTTACTCTATTTGCTGTGCACTGTGCTGGATGCTTTTATTATCTTCTTGCCGCGCGTTATCATGATCCAGCAAAGACATGGATTGGCGAATCAATGTCAAATTTCCTTCAGCAGTCCTTGTGGACAAGATATGTGACAACTATATACTGGTCCATCACTACTTTGACAACAGTTGGTTATGGAGATTTGCATCCGGTGAATGAAAGGGAGATGATCTTTGTCATATTTTACATGCTCTTTAATCTAGGATTAACAGCATATCTGATTGGTAACATGACTAACTTAGTTGTCCATGGCACAAGTCGAACTAGAAAATTTAGGGATACCATACAAGCTGCATCAAGTTTTGCTCATAGGAACCAATTACCTCCTCGTCTACAAGATCAAATGCTTGCTCACTTGTGTTTGAAGTTTAGAACAGACTCGGAGGGCTTGCAGCAACAGGAGACACTTGAGTCTCTTCCTAAAGCCATCAGATCAAGCATTTCACATTATCTTTTCTATTCTCTGATGGATAAGGTATCTGAGATGAAGCCGGAGTATTTTCCACCTAAAGAAGATGTTATCTTACAAAATGAAGCTCCAACTGATTTTTACATTCTAGTCACTGGTGCTGTGGACTTGGTAGTTCTCAAAGGCGGGGTTGAACAGATTGTCGGTGAGGCGAAAACAGGAGAACTTTGTGGCGAGATTGGTGTACTTTGCTATAAGCCACAACATTTTACAGTTAGAACCAAACGATTAAGTCAACTGTTGAGGCTGAACCGTACCACCTTCTTGAATATTGTTCAAGCTAATGTTGGTGACGGAACCATAATCATGAATAACCTTCTTCAGCATTTGAAAGAGCTGAACGATCCAATTATGGAGGGAGTTTTGGTCGAGACAGAGAACATGTTAGCTCGCGGTAGGATGGACTTACCAGTAAGTCTATGCTTTGCAGCAGAAAGAGGAGATGATTTGTTGTTACAACAATTGTTAAAACGAGGTTTGGATCCAAATGAATCTGACAATAATGGAAGGACAGCTTTGCATATAGCAGCATGTAAAGGAAAAGAAAACTGTGTTTTACTTCTGTTAGATTATGGGGCAAATCCCAACGTTAGAGATTCTGATGGAAATGTAGCACTGTGGGAGGCTATACTTGGAGGACATGAATCAGTAACAAAACTTTTGGCAGAAAATGGTGCCACCTTGCAAATTGGTGATGTTGGTCAATATGCATGCACTGCAGTTGAACAGAACAATCTCAATTTGTTGCAAGACATTATGCGATACGGTGGAGACATCACGCTTCCAAATAACAGCGTTGGAACCACGGCGTTACACGTGGCAGTCTCCGAAGACAGTGTTGAAATTGTCAAATTCCTATTAGAACATGGTGCTAACATTGACAAACAAGATAAATATGGTTGGAGTCCAAGAGATTTAGCTGACCAACAAGGACATACAGAAATCAAAGCTATTTTTGAAGCCAAAGGAGAAGATAATAGTAAGATTCAATCTTTTGTTTCTGTGCCTATTCCTGAGAGGCAGGATAGTAAAGTAAGGTACCTTGGTAGATTTACAAGTGAACCAACAATGCCTACACCTCAAGATGGACCATTTCATGGAAATGATGGTTCGTGGATCCAAAATCGACCAAGGCGTAAGAATAATAACTTTCATAATTCACTCTTCGGGATAATGTCAGCGGCAACCAAAGGAGAAAATGACCAATTTTTCAGTGTTCAAATGAATAACAATGCAAGGAATGGTGTGAAGAGTGTTTCACGTCCAACCAGAGTAACAATTAGTTGTCCTGAAAAGGGTGAGGTTGCTGGGAAGCTTGTGTTGCTACCTGAAAGTTTTAAAGAGTTACTTGAAATTGGATCTAAGAAATTTGGTATAGTTGCTACAAAGGTTGTTTGCAAAGATGGAGCTGAAATTGATGATATTGAGGTTATTAGAGATGGTGATCATCTTGTTTTTGTTGGTACTGGTGGGGTGCTAGAATCCAATTGTACAACACCCTCTAATGGTGTCAATCCATAA
Protein sequence

>Msa1331820

MVLPMTMCGQEELELSRDGSHYSLTTGILPSLGARSNRRVKLRPLIISPYDRRYRIWETFLVTLVVYTAWVSPFEFGFLKKPQKPLSVTDNIVNGFFAIDIVLTFFVAYLDKTTYLFVDNPKQIAWKYARTWFVLDFISIIPSELVAHISPAPMQTYGLFNMLRLWRLRRFMTVNVVFFEPRLEKDRNYNYFWVRCAKLICVTLFAVHCAGCFYYLLAARYHDPAKTWIGESMSNFLQQSLWTRYVTTIYWSITTLTTVGYGDLHPVNEREMIFVIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAHRNQLPPRLQDQMLAHLCLKFRTDSEGLQQQETLESLPKAIRSSISHYLFYSLMDKVSEMKPEYFPPKEDVILQNEAPTDFYILVTGAVDLVVLKGGVEQIVGEAKTGELCGEIGVLCYKPQHFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKELNDPIMEGVLVETENMLARGRMDLPVSLCFAAERGDDLLLQQLLKRGLDPNESDNNGRTALHIAACKGKENCVLLLLDYGANPNVRDSDGNVALWEAILGGHESVTKLLAENGATLQIGDVGQYACTAVEQNNLNLLQDIMRYGGDITLPNNSVGTTALHVAVSEDSVEIVKFLLEHGANIDKQDKYGWSPRDLADQQGHTEIKAIFEAKGEDNSKIQSFVSVPIPERQDSKVRYLGRFTSEPTMPTPQDGPFHGNDGSWIQNRPRRKNNNFHNSLFGIMSAATKGENDQFFSVQMNNNARNGVKSVSRPTRVTISCPEKGEVAGKLVLLPESFKELLEIGSKKFGIVATKVVCKDGAEIDDIEVIRDGDHLVFVGTGGVLESNCTTPSNGVNP*