AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0497680


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0497680 MtrunA17_Chr3g0093041 95.567 609 25 1 341 947 1 609 0.0 1214
Msa0497680 MtrunA17_Chr3g0132711 82.667 600 102 2 350 947 26 625 0.0 1036
Msa0497680 MtrunA17_Chr3g0093051 91.496 341 29 0 1 341 1 341 0.0 607
Msa0497680 MtrunA17_Chr3g0132721 76.540 341 80 0 1 341 1 341 5.62e-172 504
Msa0497680 MtrunA17_Chr3g0093091 31.729 665 399 17 194 843 309 933 1.06e-85 295
Msa0497680 MtrunA17_Chr4g0060401 32.440 672 385 18 194 843 302 926 3.01e-85 294
Msa0497680 MtrunA17_Chr4g0060431 31.902 652 379 13 207 838 302 908 3.91e-84 291
Msa0497680 MtrunA17_Chr4g0060501 31.346 654 390 15 207 843 317 928 6.07e-83 287
Msa0497680 MtrunA17_Chr7g0257341 28.678 938 498 32 9 839 5 878 8.05e-78 278
Msa0497680 MtrunA17_Chr7g0257341 26.958 779 465 24 10 742 968 1688 1.17e-54 207
Msa0497680 MtrunA17_Chr4g0060421 34.908 487 272 13 361 843 3 448 2.30e-72 246
Msa0497680 MtrunA17_Chr4g0060471 41.554 296 155 6 549 842 1 280 2.26e-64 218
Msa0497680 MtrunA17_Chr3g0130331 30.286 175 107 5 545 708 70 240 2.19e-18 90.5
Msa0497680 MtrunA17_Chr1g0202431 28.959 221 148 5 524 739 41 257 4.94e-18 89.0
Msa0497680 MtrunA17_Chr8g0384391 29.730 185 118 4 532 708 55 235 4.05e-16 83.2
Msa0497680 MtrunA17_Chr1g0198931 26.667 270 177 8 518 771 92 356 6.17e-16 82.4
Msa0497680 MtrunA17_Chr4g0041871 30.481 187 118 7 549 728 376 557 9.29e-15 79.3
Msa0497680 MtrunA17_Chr1g0200651 26.820 261 162 8 545 784 102 354 1.25e-14 78.2
Msa0497680 MtrunA17_Chr8g0393191 28.800 250 157 8 518 755 58 298 2.39e-14 77.8
Msa0497680 MtrunA17_Chr4g0039261 25.991 227 149 6 544 757 62 282 3.04e-14 77.0
Msa0497680 MtrunA17_Chr4g0050221 28.261 230 143 6 544 757 42 265 4.31e-14 76.6
Msa0497680 MtrunA17_Chr2g0318061 26.006 323 171 14 496 789 18 301 4.62e-14 75.1
Msa0497680 MtrunA17_Chr4g0065231 24.845 322 212 11 511 820 57 360 1.50e-13 74.7
Msa0497680 MtrunA17_Chr4g0050291 30.726 179 103 5 545 708 62 234 2.57e-13 73.9
Msa0497680 MtrunA17_Chr1g0199471 27.586 232 148 7 532 749 516 741 2.90e-13 74.3
Msa0497680 MtrunA17_Chr4g0050261 29.474 190 113 5 534 708 74 257 3.08e-13 73.9
Msa0497680 MtrunA17_Chr1g0178481 25.000 204 143 5 532 728 395 595 3.11e-13 73.6
Msa0497680 MtrunA17_Chr5g0411621 28.713 202 129 6 543 733 61 258 3.72e-13 73.6
Msa0497680 MtrunA17_Chr7g0264441 29.630 162 100 4 532 683 278 435 5.55e-13 73.2
Msa0497680 MtrunA17_Chr5g0408061 28.151 238 153 8 545 769 77 309 7.65e-13 72.4
Msa0497680 MtrunA17_Chr3g0102731 29.189 185 116 6 534 708 99 278 1.13e-12 72.0
Msa0497680 MtrunA17_Chr8g0359931 29.714 175 106 5 545 708 78 246 1.19e-12 72.0
Msa0497680 MtrunA17_Chr1g0180971 31.056 161 99 4 532 683 412 569 1.25e-12 72.0
Msa0497680 MtrunA17_Chr2g0316301 27.727 220 136 9 551 752 91 305 2.68e-12 70.9
Msa0497680 MtrunA17_Chr6g0477811 24.542 273 183 7 548 803 81 347 5.19e-12 70.1
Msa0497680 MtrunA17_Chr4g0039251 25.000 196 128 6 545 727 105 294 6.37e-12 69.7
Msa0497680 MtrunA17_Chr4g0050251 29.474 190 113 6 534 708 74 257 6.42e-12 69.7
Msa0497680 MtrunA17_Chr5g0446901 28.495 186 120 5 534 708 110 293 7.54e-12 69.3
Msa0497680 MtrunA17_Chr4g0028621 32.298 161 89 5 532 679 506 659 8.07e-12 69.7
Msa0497680 MtrunA17_Chr1g0176451 24.275 276 173 9 545 788 35 306 2.19e-11 67.8
Msa0497680 MtrunA17_Chr1g0176441 25.837 209 140 6 544 741 182 386 2.48e-11 67.8
Msa0497680 MtrunA17_Chr1g0213091 27.143 210 137 6 545 742 134 339 2.97e-11 67.4
Msa0497680 MtrunA17_Chr4g0060411 32.258 155 102 3 194 346 293 446 5.22e-11 66.2
Msa0497680 MtrunA17_Chr1g0156821 23.982 221 158 5 547 761 1025 1241 5.56e-11 67.0
Msa0497680 MtrunA17_Chr7g0262221 31.016 187 112 6 534 708 855 1036 5.58e-11 67.0
Msa0497680 MtrunA17_Chr7g0263351 27.143 210 135 6 545 741 139 343 6.91e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0497680 AT3G47730.1 65.453 961 302 8 1 938 3 956 0.0 1308
Msa0497680 AT5G61690.2 62.278 957 334 8 1 937 3 952 0.0 1197
Msa0497680 AT5G61690.1 61.755 957 338 9 1 937 3 951 0.0 1182
Msa0497680 AT5G61730.2 61.835 959 328 9 1 937 3 945 0.0 1175
Msa0497680 AT5G61730.1 61.001 959 326 10 1 937 3 935 0.0 1149
Msa0497680 AT5G61700.1 30.534 655 386 15 207 843 308 911 3.42e-88 302
Msa0497680 AT3G47790.1 30.101 794 470 21 79 842 163 901 1.35e-83 289
Msa0497680 AT3G47780.1 30.758 660 381 15 207 843 323 929 1.74e-82 286
Msa0497680 AT5G61740.3 30.229 655 383 13 207 843 166 764 2.66e-82 283
Msa0497680 AT5G61740.2 30.229 655 383 13 207 843 271 869 1.47e-81 283
Msa0497680 AT5G61740.1 30.229 655 383 13 207 843 305 903 3.12e-81 283
Msa0497680 AT3G47750.1 30.402 671 395 15 194 843 312 931 1.39e-78 276
Msa0497680 AT3G47740.1 30.640 656 384 17 207 843 323 926 4.09e-77 271
Msa0497680 AT3G47760.3 30.665 662 379 19 207 843 324 930 5.60e-76 268
Msa0497680 AT2G41700.1 28.725 933 497 32 10 839 6 873 8.85e-76 273
Msa0497680 AT2G41700.1 32.190 525 291 15 245 742 1197 1683 9.37e-61 227
Msa0497680 AT3G47770.1 30.091 658 382 15 207 840 294 897 2.61e-75 266
Msa0497680 AT3G47770.2 30.091 658 382 15 207 840 320 923 5.78e-75 265
Msa0497680 AT3G47760.1 30.060 662 377 19 207 843 290 890 1.29e-74 264
Msa0497680 AT3G47760.2 29.833 657 361 20 207 843 324 900 5.18e-69 248
Msa0497680 AT2G41700.2 34.099 566 301 16 297 839 277 793 2.55e-68 250
Msa0497680 AT2G41700.2 29.982 567 306 16 245 753 1119 1652 2.67e-56 213
Msa0497680 AT5G61700.2 30.097 515 313 11 207 707 308 789 2.02e-65 236
Msa0497680 AT5G61700.4 30.097 515 313 11 207 707 308 789 2.02e-65 236
Msa0497680 AT3G47790.2 29.590 659 395 20 79 708 44 662 1.01e-62 225
Msa0497680 AT3G47790.3 29.590 659 395 20 79 708 163 781 2.50e-62 226
Msa0497680 AT5G61700.3 25.400 437 281 10 207 631 308 711 1.63e-36 148
Msa0497680 AT3G47770.3 23.741 417 258 10 207 602 320 697 1.01e-19 95.1
Msa0497680 AT4G25750.1 33.161 193 114 8 544 728 41 226 1.83e-18 90.9
Msa0497680 AT2G13610.1 32.979 188 108 8 532 708 61 241 2.79e-18 90.5
Msa0497680 AT5G52860.1 29.208 202 133 6 530 726 41 237 1.43e-16 84.7
Msa0497680 AT3G13220.1 24.483 290 185 8 532 791 105 390 5.63e-15 80.1
Msa0497680 AT4G27420.1 26.752 314 204 13 520 811 53 362 1.15e-14 79.0
Msa0497680 AT1G53270.1 29.798 198 114 8 545 726 62 250 1.31e-14 78.6
Msa0497680 AT1G65410.1 28.182 220 132 7 532 728 98 314 1.97e-14 76.3
Msa0497680 AT2G37010.2 28.452 239 154 7 532 757 499 733 3.09e-14 77.8
Msa0497680 AT2G37010.1 28.452 239 154 7 532 757 499 733 3.09e-14 77.8
Msa0497680 AT1G51500.1 26.383 235 142 8 544 761 55 275 3.21e-14 77.4
Msa0497680 AT1G51460.1 30.000 180 102 6 544 708 41 211 1.15e-13 75.9
Msa0497680 AT1G67940.1 24.623 199 141 6 534 728 45 238 2.42e-13 71.6
Msa0497680 AT3G21090.1 25.381 197 128 6 544 727 56 246 2.66e-13 74.7
Msa0497680 AT3G25620.2 26.642 274 178 10 545 804 111 375 2.89e-13 74.3
Msa0497680 AT3G25620.1 26.642 274 178 10 545 804 111 375 7.13e-13 72.4
Msa0497680 AT5G06530.2 27.358 212 139 6 534 734 180 387 1.31e-12 72.4
Msa0497680 AT5G06530.1 27.358 212 139 6 534 734 180 387 1.31e-12 72.4
Msa0497680 AT5G06530.3 27.358 212 139 6 534 734 180 387 1.34e-12 72.4
Msa0497680 AT1G17840.1 25.726 241 156 7 532 757 68 300 1.58e-12 72.0
Msa0497680 AT3G55110.1 30.806 211 131 7 545 743 103 310 3.18e-12 71.2
Msa0497680 AT4G15236.1 29.213 178 113 5 541 708 825 999 4.16e-12 71.2
Msa0497680 AT1G31770.1 29.885 174 109 4 544 708 92 261 6.07e-12 70.1
Msa0497680 AT5G60740.1 30.128 156 99 3 532 679 514 667 6.20e-12 70.5
Msa0497680 AT5G06530.4 28.571 196 125 6 550 734 1 192 6.51e-12 69.7
Msa0497680 AT1G27940.2 24.537 216 143 6 535 739 809 1015 7.47e-12 70.1
Msa0497680 AT1G27940.2 23.106 264 170 7 491 742 143 385 2.33e-11 68.6
Msa0497680 AT4G15233.8 29.213 178 113 5 541 708 818 992 8.85e-12 70.1
Msa0497680 AT4G15233.3 29.213 178 113 5 541 708 765 939 9.29e-12 70.1
Msa0497680 AT4G15233.6 29.213 178 113 5 541 708 765 939 9.29e-12 70.1
Msa0497680 AT4G15233.5 29.213 178 113 5 541 708 684 858 9.36e-12 70.1
Msa0497680 AT4G15233.4 29.213 178 113 5 541 708 684 858 9.36e-12 70.1
Msa0497680 AT4G15233.7 29.213 178 113 5 541 708 809 983 9.37e-12 70.1
Msa0497680 AT4G15233.2 29.213 178 113 5 541 708 827 1001 9.71e-12 70.1
Msa0497680 AT4G15233.1 29.213 178 113 5 541 708 827 1001 1.02e-11 69.7
Msa0497680 AT1G27940.1 24.537 216 143 6 535 739 1023 1229 1.22e-11 69.7
Msa0497680 AT1G27940.1 23.106 264 170 7 491 742 357 599 3.07e-11 68.2
Msa0497680 AT1G53390.1 28.824 170 108 4 549 708 539 705 1.33e-11 69.3
Msa0497680 AT5G19410.2 24.757 206 136 7 544 733 86 288 1.84e-11 68.6
Msa0497680 AT5G19410.1 24.757 206 136 7 544 733 77 279 1.88e-11 68.6
Msa0497680 AT3G55100.1 26.263 198 130 5 543 728 61 254 1.90e-11 68.6
Msa0497680 AT3G55100.2 26.263 198 130 5 543 728 61 254 1.90e-11 68.6
Msa0497680 AT3G55130.1 29.412 204 117 7 542 727 108 302 3.07e-11 67.8
Msa0497680 AT1G28010.1 23.767 223 152 5 530 742 386 600 4.50e-11 67.8
Msa0497680 AT2G37280.4 30.000 180 109 6 541 708 690 864 5.00e-11 67.4
Msa0497680 AT2G26910.1 32.353 204 110 10 541 726 853 1046 5.43e-11 67.4
Msa0497680 AT2G37280.3 30.000 180 109 6 541 708 877 1051 6.29e-11 67.4
Msa0497680 AT2G37280.1 30.000 180 109 6 541 708 848 1022 6.76e-11 67.0
Msa0497680 AT2G37280.2 30.000 180 109 6 541 708 848 1022 7.26e-11 67.0
Msa0497680 AT2G37360.1 25.506 247 152 8 518 741 112 349 7.79e-11 66.6
Msa0497680 AT3G53480.1 29.444 180 110 6 541 708 885 1059 8.84e-11 66.6

Find 227 sgRNAs with CRISPR-Local

Find 492 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTTACAGCATTGATTTA+TGG 0.123489 3_4:-31905432 Msa0497680:intron
TTCATCCAAAATGACTAATT+TGG 0.137012 3_4:+31904763 None:intergenic
ACTTTCTAAATCCTCGTTAT+TGG 0.150098 3_4:-31906538 Msa0497680:CDS
TTTGAGGAATATGAGCTTTC+TGG 0.153807 3_4:+31902902 None:intergenic
TGACCCCAAATTAGTCATTT+TGG 0.172803 3_4:-31904768 Msa0497680:CDS
TGATTCATGCTCAGTGATTT+TGG 0.177760 3_4:-31902781 Msa0497680:three_prime_UTR
TACCCCGGTATATTTAAATT+TGG 0.202872 3_4:-31906228 Msa0497680:CDS
TCAAACATTCGAAAGATTAT+TGG 0.207745 3_4:-31905381 Msa0497680:CDS
CACACATGCCTCCTTGTTAT+TGG 0.221179 3_4:+31904632 None:intergenic
GAACTCTTCTCTAGAATTAA+AGG 0.224002 3_4:-31905015 Msa0497680:CDS
CCTTTACAGCATTGATTTAT+GGG 0.249063 3_4:-31905431 Msa0497680:intron
TGTTCTCACAACACATTCTA+TGG 0.250657 3_4:-31904573 Msa0497680:CDS
GAAATCGCTAGGTTTCTTAT+TGG 0.252209 3_4:-31909696 Msa0497680:CDS
TCTCTTCTCTTAGTTCTTAC+TGG 0.267894 3_4:-31907465 Msa0497680:CDS
AAGTTATTGTTCTCCTCTTT+TGG 0.268745 3_4:+31904251 None:intergenic
TCATCCAAAATGACTAATTT+GGG 0.271209 3_4:+31904764 None:intergenic
CTGGTCATTACCGAGATTTA+TGG 0.288621 3_4:-31907011 Msa0497680:CDS
CTGTCTGAACTAACTTGATT+TGG 0.302323 3_4:+31902811 None:intergenic
CAAGATAGAAAAGAAGAATT+TGG 0.305480 3_4:-31903684 Msa0497680:CDS
TCCTCACAAGGTTTGATTGA+TGG 0.314934 3_4:+31910050 None:intergenic
TTCCTCACACCCATTTCATT+TGG 0.315266 3_4:+31906572 None:intergenic
TGATATTTATATACGGCTTC+TGG 0.316760 3_4:-31906645 Msa0497680:CDS
TGATGCAAATGTTGCTGTTC+AGG 0.321996 3_4:-31906271 Msa0497680:CDS
GACAGAATGATATTTATATA+CGG 0.323292 3_4:-31906652 Msa0497680:intron
ATGGAAGTATTATTAGTTAT+GGG 0.329578 3_4:-31909812 Msa0497680:CDS
CAATATAATCCCAAATGAAA+TGG 0.332938 3_4:-31906582 Msa0497680:CDS
GATGCTGTGTCACCATTTGC+AGG 0.333293 3_4:+31904407 None:intergenic
ACCGGTACCCTTTGTATTGC+CGG 0.337280 3_4:-31902931 Msa0497680:CDS
TTCTCTACAGTTGGATCAAT+GGG 0.340505 3_4:-31908116 Msa0497680:CDS
AACACATTCCACTTGAAGTC+TGG 0.343527 3_4:+31908173 None:intergenic
AATGGAAGTATTATTAGTTA+TGG 0.344238 3_4:-31909813 Msa0497680:CDS
TCACCATGTTGAGTTCAAAT+AGG 0.347909 3_4:+31907379 None:intergenic
TGCCGTGTTATGATTTCGTT+TGG 0.352870 3_4:-31910010 Msa0497680:CDS
CATGAGGAATCACATAAGTT+AGG 0.353265 3_4:+31904228 None:intergenic
TCCTCACACCCATTTCATTT+GGG 0.358716 3_4:+31906573 None:intergenic
AGCATTGATTTATGGGAATT+CGG 0.359317 3_4:-31905424 Msa0497680:CDS
TTGAGGAATATGAGCTTTCT+GGG 0.364777 3_4:+31902903 None:intergenic
AGTGTTGCAATTGCACTTAT+CGG 0.365108 3_4:-31904791 Msa0497680:CDS
GCTATGTATGTGGGATTTCC+AGG 0.365207 3_4:-31903015 Msa0497680:CDS
ATCAGATTGAAGTCACGTTT+TGG 0.380754 3_4:-31904479 Msa0497680:CDS
CAGCTAACCCCGTTATCTTC+AGG 0.381965 3_4:+31906925 None:intergenic
CTTTGTCTATGGCGAAGATT+AGG 0.382631 3_4:+31910141 None:intergenic
CGTTCTTCAGATAAGTTCAT+TGG 0.383758 3_4:-31908057 Msa0497680:CDS
CGCCGGTCAGGGTCAGTTCA+TGG 0.391054 3_4:-31902847 Msa0497680:CDS
TTTCTGAACACTAGTAGAAT+TGG 0.394546 3_4:+31909782 None:intergenic
AAATTACTTTCAGGGCTTGT+GGG 0.395875 3_4:-31905684 Msa0497680:intron
CCTTTGCCATGATTCCTATA+CGG 0.397849 3_4:+31904528 None:intergenic
TCAAGGACGTCTTCATCATC+TGG 0.400264 3_4:+31906336 None:intergenic
TCACCATCTCCATCAGTTAC+TGG 0.400609 3_4:+31905572 None:intergenic
TATGTCGAGATGGAAGAATT+TGG 0.401224 3_4:-31902644 Msa0497680:three_prime_UTR
TTTCAACTCCTGAAGATAAC+GGG 0.402720 3_4:-31906933 Msa0497680:CDS
GTAACTTCCAGCTCTTACTT+TGG 0.403285 3_4:+31904838 None:intergenic
GTAGAGAAAGGAGCCATTCC+TGG 0.403530 3_4:+31908131 None:intergenic
CAAATTACTTTCAGGGCTTG+TGG 0.404244 3_4:-31905685 Msa0497680:intron
ATCTACAGTTTGATATCCTA+TGG 0.404903 3_4:-31905065 Msa0497680:intron
TTTCTCTACAGTTGGATCAA+TGG 0.405765 3_4:-31908117 Msa0497680:CDS
TTGGTGAGAGGAGTTGAAGA+AGG 0.406104 3_4:+31910177 None:intergenic
CACACAGTCATCGTCGTTAA+CGG 0.408573 3_4:+31906882 None:intergenic
ACTGCAAGACAACGCCGGTC+AGG 0.409291 3_4:-31902859 Msa0497680:CDS
AGTTTCGTACGATTGTTGAT+AGG 0.409352 3_4:-31909968 Msa0497680:CDS
GATTATATTGTCAAAGTAGA+TGG 0.409408 3_4:+31906595 None:intergenic
ATCCTATGGGAGGCTTTGTC+TGG 0.412790 3_4:-31905051 Msa0497680:CDS
TTTCTTGAATATTGCAAAGC+AGG 0.416432 3_4:-31903619 Msa0497680:CDS
ATTCTTATTTCTTAGACTAC+TGG 0.420871 3_4:-31904662 Msa0497680:intron
CTAAATCCTCGTTATTGGAC+AGG 0.423781 3_4:-31906533 Msa0497680:CDS
AATTCGGTCCGAAGCTCTAC+TGG 0.428148 3_4:-31905408 Msa0497680:CDS
TGCTCCTTACCACGCTGTTA+AGG 0.432338 3_4:-31906181 Msa0497680:intron
ATGGAAGAATTTGGAGGGGA+AGG 0.434696 3_4:-31902635 Msa0497680:three_prime_UTR
AGAGAGAGAAGAGGTGAGGA+AGG 0.434696 3_4:+31910346 None:intergenic
GCAACCAAATTTAAATATAC+CGG 0.438025 3_4:+31906224 None:intergenic
AACTCTTCTCTAGAATTAAA+GGG 0.440828 3_4:-31905014 Msa0497680:CDS
TTTCATTCGTAAATCATCTT+CGG 0.441394 3_4:-31907219 Msa0497680:CDS
ACACTCAGGCCTTGAGCAAA+AGG 0.441420 3_4:+31906970 None:intergenic
CTGAAGATAACGGGGTTAGC+TGG 0.442106 3_4:-31906924 Msa0497680:CDS
TCAACAATCGTACGAAACTT+TGG 0.444919 3_4:+31909972 None:intergenic
ATTAGGAAAATGAAGAAGAT+TGG 0.447583 3_4:+31910158 None:intergenic
GGCTTTACGACTCTGCATAC+TGG 0.448998 3_4:-31907530 Msa0497680:CDS
GTGACTTTGACCTTGACATC+TGG 0.451578 3_4:-31903561 Msa0497680:CDS
AGGCCTTGAGCAAAAGGATT+AGG 0.453113 3_4:+31906976 None:intergenic
TGGAAGAATTTGGAGGGGAA+GGG 0.453395 3_4:-31902634 Msa0497680:three_prime_UTR
ACTGGTTATCATGGCTAACC+TGG 0.456830 3_4:-31907512 Msa0497680:CDS
CGCTCCGCAGCAAGCTGAAG+AGG 0.457165 3_4:+31909720 None:intergenic
ATCGCTAGGTTTCTTATTGG+AGG 0.460474 3_4:-31909693 Msa0497680:intron
TAGAGAAATACCTGTTGAAA+AGG 0.463474 3_4:-31909925 Msa0497680:CDS
AATATAATCCCAAATGAAAT+GGG 0.463808 3_4:-31906581 Msa0497680:CDS
AAGGGAAAGCTGCGCTGCAT+TGG 0.464105 3_4:-31904509 Msa0497680:CDS
TATTTCTTAGACTACTGGTA+TGG 0.468191 3_4:-31904657 Msa0497680:intron
CACTTGTATATGTTGTCAGT+TGG 0.469578 3_4:-31902674 Msa0497680:three_prime_UTR
TTTAGATGTAGTACCAAAAG+AGG 0.471690 3_4:-31904264 Msa0497680:CDS
ACAGCTATTAGTTGTTTGAC+AGG 0.479657 3_4:-31905602 Msa0497680:CDS
CTAGAAAGTGCTGCAGCTGA+AGG 0.480749 3_4:-31903591 Msa0497680:CDS
TATATGTTGTCAGTTGGAAT+CGG 0.481518 3_4:-31902668 Msa0497680:three_prime_UTR
TTGTGTGACAGAGAGGGAGA+GGG 0.482810 3_4:+31910321 None:intergenic
TATTCAGTAGACTCTGATCC+TGG 0.491964 3_4:+31902997 None:intergenic
GGATAGGCAATGACCGTGAT+GGG 0.492293 3_4:-31907552 Msa0497680:intron
CAAGGTTTGATTGATGGAGA+TGG 0.493575 3_4:+31910056 None:intergenic
AAGAATTTGGAGGGGAAGGG+AGG 0.496014 3_4:-31902631 Msa0497680:three_prime_UTR
TTGACATGCCAGTAGAGCTT+CGG 0.501825 3_4:+31905400 None:intergenic
TTGCAGTAGCAGATGGTAGT+TGG 0.501869 3_4:+31902875 None:intergenic
ATGAGCTTTCTGGGAGTGGC+CGG 0.502830 3_4:+31902912 None:intergenic
TTCTGGCCACGTTCTTTCTG+TGG 0.504319 3_4:-31906628 Msa0497680:CDS
ACACATTCCACTTGAAGTCT+GGG 0.505693 3_4:+31908174 None:intergenic
CATAAATCTCGGTAATGACC+AGG 0.507288 3_4:+31907012 None:intergenic
AAATGAAAGGAAATAGAGAA+TGG 0.507748 3_4:-31902740 Msa0497680:three_prime_UTR
TAATTCTAGAGAAGAGTTCG+AGG 0.508271 3_4:+31905019 None:intergenic
CTGCGGAGCGTGAAATCGCT+AGG 0.509620 3_4:-31909707 Msa0497680:CDS
AATGTTGCTGTTCAGGTACA+AGG 0.509773 3_4:-31906264 Msa0497680:CDS
ATGGCTCCTTTCTCTACAGT+TGG 0.510714 3_4:-31908125 Msa0497680:CDS
AGGATAATTAAGAATAATCC+TGG 0.512597 3_4:-31909948 Msa0497680:CDS
TCGAGATGGAAGAATTTGGA+GGG 0.518629 3_4:-31902640 Msa0497680:three_prime_UTR
CAACCAAATTTAAATATACC+GGG 0.518875 3_4:+31906225 None:intergenic
GTAGATTACAGAAACATCAT+TGG 0.519025 3_4:-31904885 Msa0497680:intron
AAGCGACCGTATAGGAATCA+TGG 0.520598 3_4:-31904534 Msa0497680:CDS
ATTGATGGAGATGGAATCAA+TGG 0.521134 3_4:+31910065 None:intergenic
CTCCATGAACTGACCCTGAC+CGG 0.524172 3_4:+31902845 None:intergenic
GAGTGTAACAACTGTTTCCC+AGG 0.524237 3_4:+31907494 None:intergenic
ATAAGAATGAAGTTGATGAT+TGG 0.525841 3_4:-31909887 Msa0497680:CDS
GACATTCTAAGCGACCGTAT+AGG 0.526286 3_4:-31904542 Msa0497680:CDS
GGCATATCTGACATCCAGCT+TGG 0.526758 3_4:-31903663 Msa0497680:CDS
CTATTAGGACCCAATGGAGC+GGG 0.528099 3_4:-31905632 Msa0497680:CDS
GTTTCAACTCCTGAAGATAA+CGG 0.529040 3_4:-31906934 Msa0497680:CDS
CTTCCTATTTGAACTCAACA+TGG 0.529346 3_4:-31907382 Msa0497680:intron
GAAAGAGCTTAAACTTCGCC+AGG 0.529573 3_4:-31908027 Msa0497680:intron
GAATATGAGCTTTCTGGGAG+TGG 0.529777 3_4:+31902908 None:intergenic
ACTCTGCATACTGGTTATCA+TGG 0.530073 3_4:-31907521 Msa0497680:CDS
AAGGAGCCATTCCTGGGTGC+GGG 0.532692 3_4:+31908138 None:intergenic
CGTATAGGAATCATGGCAAA+GGG 0.534824 3_4:-31904527 Msa0497680:CDS
AATGATCACAGTCCTGCAAA+TGG 0.535003 3_4:-31904419 Msa0497680:CDS
GTGGACTAAACTCTTCATGC+CGG 0.539359 3_4:+31906358 None:intergenic
TTTGTGTGACAGAGAGGGAG+AGG 0.540586 3_4:+31910320 None:intergenic
CAAGAGTTGTTAGACCAAGC+TGG 0.541847 3_4:+31903649 None:intergenic
ATGTCAAGGTCAAAGTCACT+AGG 0.542916 3_4:+31903565 None:intergenic
CGTTGTCTTGCAGTAGCAGA+TGG 0.546260 3_4:+31902868 None:intergenic
CCCACATACATAGCTCCTAC+AGG 0.547082 3_4:+31903024 None:intergenic
AAAGGAGCCATTCCTGGGTG+CGG 0.547300 3_4:+31908137 None:intergenic
CAATAACAAGGAGGCATGTG+TGG 0.547456 3_4:-31904631 Msa0497680:CDS
GCATTTCTTTCACAGAGGGT+GGG 0.550147 3_4:-31906404 Msa0497680:intron
GGCAACTGAAAATCAAAAGT+AGG 0.551167 3_4:+31909741 None:intergenic
CCTCGTTATTGGACAGGAGA+CGG 0.551929 3_4:-31906527 Msa0497680:CDS
AAGAATCCTATGCAATGTCC+TGG 0.553087 3_4:-31909858 Msa0497680:CDS
CTGCAAGACAACGCCGGTCA+GGG 0.558498 3_4:-31902858 Msa0497680:CDS
GGAATTCCCGCACCCAGGAA+TGG 0.559180 3_4:-31908144 Msa0497680:CDS
GGGAGTGGCCGGCAATACAA+AGG 0.562004 3_4:+31902923 None:intergenic
ATTGATCCAACTGTAGAGAA+AGG 0.562560 3_4:+31908119 None:intergenic
TTTACCTTAACAGCGTGGTA+AGG 0.562656 3_4:+31906177 None:intergenic
GGGATAGGCAATGACCGTGA+TGG 0.562743 3_4:-31907553 Msa0497680:intron
GACATCTGGAGAGTCTGTCC+AGG 0.563696 3_4:-31903547 Msa0497680:intron
GATGCAGCCAAAGTAAGAGC+TGG 0.564253 3_4:-31904845 Msa0497680:CDS
TCCTGTAGGAGCTATGTATG+TGG 0.564459 3_4:-31903025 Msa0497680:CDS
GCCGGCAATACAAAGGGTAC+CGG 0.564920 3_4:+31902930 None:intergenic
TGGACTAAACTCTTCATGCC+GGG 0.567053 3_4:+31906359 None:intergenic
GACAGACTCTCCAGATGTCA+AGG 0.568009 3_4:+31903551 None:intergenic
CCTGTAGGAGCTATGTATGT+GGG 0.570418 3_4:-31903024 Msa0497680:CDS
GTCGAGATGGAAGAATTTGG+AGG 0.570535 3_4:-31902641 Msa0497680:three_prime_UTR
TCAACAGGTATTTCTCTACC+AGG 0.570994 3_4:+31909930 None:intergenic
ATGAAGAATTTCTCCTCACA+AGG 0.572331 3_4:+31910038 None:intergenic
GAAACAATAACCATAAATCT+CGG 0.572683 3_4:+31907001 None:intergenic
TTGCAGATGGTATCAACAGT+AGG 0.574691 3_4:-31907051 Msa0497680:intron
ACTTCTACCATAAAACCTGT+GGG 0.576329 3_4:+31902973 None:intergenic
AAATGAAGAAGATTGGTGAG+AGG 0.576882 3_4:+31910165 None:intergenic
GATTATTGGAGTGTGTCCCC+AGG 0.579294 3_4:-31905367 Msa0497680:intron
TACAGAAACATCATTGGCAG+AGG 0.580624 3_4:-31904879 Msa0497680:CDS
CAGCTATTAGTTGTTTGACA+GGG 0.580828 3_4:-31905601 Msa0497680:CDS
TAGAGAAAGGAGCCATTCCT+GGG 0.582798 3_4:+31908132 None:intergenic
CCGTATAGGAATCATGGCAA+AGG 0.583938 3_4:-31904528 Msa0497680:CDS
AATGAAAGCTGATAACAAGA+AGG 0.585623 3_4:+31907235 None:intergenic
TTCAAGGAATTCCCGCACCC+AGG 0.586408 3_4:-31908149 Msa0497680:CDS
GGAGTGGCCGGCAATACAAA+GGG 0.587849 3_4:+31902924 None:intergenic
CGAGATGGAAGAATTTGGAG+GGG 0.588801 3_4:-31902639 Msa0497680:three_prime_UTR
TACTTCTACCATAAAACCTG+TGG 0.593458 3_4:+31902972 None:intergenic
TCATCTTCGGCAACAACAGT+CGG 0.593670 3_4:-31907206 Msa0497680:CDS
CAGCCTTTGCAAGCACACTC+AGG 0.597155 3_4:+31906956 None:intergenic
GTAAGAGCTGGAAGTTACAG+TGG 0.600311 3_4:-31904833 Msa0497680:CDS
GTTGCCTCTTCAGCTTGCTG+CGG 0.600797 3_4:-31909724 Msa0497680:CDS
AGGCCTGAGTGTGCTTGCAA+AGG 0.601784 3_4:-31906959 Msa0497680:CDS
TAGAAAGTGCTGCAGCTGAA+GGG 0.602703 3_4:-31903590 Msa0497680:CDS
CTGTCACACAAAACAGAGAG+AGG 0.602943 3_4:-31910309 Msa0497680:five_prime_UTR
AGGACGTCTTCATCATCTGG+TGG 0.603910 3_4:+31906339 None:intergenic
GATGGAGATGGAATCAATGG+TGG 0.605880 3_4:+31910068 None:intergenic
TCCATCAATCAAACCTTGTG+AGG 0.609109 3_4:-31910051 Msa0497680:CDS
TCTACAGTTTGATATCCTAT+GGG 0.609822 3_4:-31905064 Msa0497680:intron
GGGATAACTCCAGTAACTGA+TGG 0.616241 3_4:-31905581 Msa0497680:CDS
TCCCAAATGAAATGGGTGTG+AGG 0.617777 3_4:-31906574 Msa0497680:CDS
TCACTAAAATGAATAGCACC+AGG 0.621112 3_4:+31909840 None:intergenic
ACAGTTTGATATCCTATGGG+AGG 0.622018 3_4:-31905061 Msa0497680:intron
TGTGATTCCTCATGAAAGAG+AGG 0.624747 3_4:-31904219 Msa0497680:CDS
ATGGAGATGGAATCAATGGT+GGG 0.627118 3_4:+31910069 None:intergenic
CTGGTTATCATGGCTAACCT+GGG 0.627124 3_4:-31907511 Msa0497680:CDS
ACTCCAGTAACTGATGGAGA+TGG 0.628421 3_4:-31905575 Msa0497680:intron
CTGGTATGGATCCAATAACA+AGG 0.631438 3_4:-31904643 Msa0497680:CDS
TGTCAAGGTCAAAGTCACTA+GGG 0.633353 3_4:+31903566 None:intergenic
CCGTCTCCTGTCCAATAACG+AGG 0.638033 3_4:+31906527 None:intergenic
CAGATGGTATCAACAGTAGG+AGG 0.638084 3_4:-31907048 Msa0497680:CDS
GACCAGACAAAGCCTCCCAT+AGG 0.638746 3_4:+31905049 None:intergenic
ATTGGCAGAGGTGAGACTCA+CGG 0.644251 3_4:-31904867 Msa0497680:CDS
TGGAATCGGATATGTCGAGA+TGG 0.644377 3_4:-31902654 Msa0497680:three_prime_UTR
TGTTATGATTTCGTTTGGAG+CGG 0.646175 3_4:-31910005 Msa0497680:CDS
GTGAAGCAGCAACAAACACA+AGG 0.646193 3_4:-31906300 Msa0497680:CDS
CGATGACTGTGTGCTGACAA+TGG 0.647516 3_4:-31906872 Msa0497680:intron
AGAGCTGGAAGTTACAGTGG+AGG 0.650512 3_4:-31904830 Msa0497680:CDS
AATAACAAGGAGGCATGTGT+GGG 0.650686 3_4:-31904630 Msa0497680:CDS
AGCATCAGCAAGACATCGTG+AGG 0.651351 3_4:-31904390 Msa0497680:CDS
GGCATTGTGAAGACTTACCC+CGG 0.651356 3_4:-31906243 Msa0497680:CDS
CATCCAAAATGACTAATTTG+GGG 0.651859 3_4:+31904765 None:intergenic
AGGAGTGCCTCTCTTTCATG+AGG 0.652639 3_4:+31904212 None:intergenic
CCTTGAGCAAAAGGATTAGG+CGG 0.654792 3_4:+31906979 None:intergenic
CTCCAAACGAAATCATAACA+CGG 0.656630 3_4:+31910008 None:intergenic
ATAGCACCAGGACATTGCAT+AGG 0.656866 3_4:+31909852 None:intergenic
GAGTCTACTGAATACCCCAC+AGG 0.659329 3_4:-31902988 Msa0497680:CDS
GTAGTTGCATATCTTCAACC+CGG 0.661373 3_4:-31906377 Msa0497680:CDS
ATAAATCTCGGTAATGACCA+GGG 0.666011 3_4:+31907013 None:intergenic
TCTATTAGGACCCAATGGAG+CGG 0.674018 3_4:-31905633 Msa0497680:CDS
CTGCTACTGCAAGACAACGC+CGG 0.674437 3_4:-31902864 Msa0497680:CDS
TCTACTAGTGTTCAGAAACG+TGG 0.679152 3_4:-31909777 Msa0497680:CDS
AACCAAATTTAAATATACCG+GGG 0.682377 3_4:+31906226 None:intergenic
TTCAACTCCTGAAGATAACG+GGG 0.682515 3_4:-31906932 Msa0497680:CDS
GATAGGCAATGACCGTGATG+GGG 0.683113 3_4:-31907551 Msa0497680:intron
AGAGTCGTAAAGCCCCATCA+CGG 0.695740 3_4:+31907539 None:intergenic
ACGTGACTTCAATCTGATCG+AGG 0.695850 3_4:+31904484 None:intergenic
AACGAACCACAGAAAGAACG+TGG 0.698760 3_4:+31906622 None:intergenic
CGTTATTGGACAGGAGACGG+AGG 0.708980 3_4:-31906524 Msa0497680:CDS
TACTGGGAACAAGATGACAC+CGG 0.712706 3_4:-31902949 Msa0497680:CDS
CTTCTACCATAAAACCTGTG+GGG 0.715948 3_4:+31902974 None:intergenic
GATGATTTACCTTAACAGCG+TGG 0.717695 3_4:+31906172 None:intergenic
GGGGTTAGCTGGAATACACG+AGG 0.756377 3_4:-31906913 Msa0497680:CDS
GTATGGATCCAATAACAAGG+AGG 0.783240 3_4:-31904640 Msa0497680:CDS
AGAATGTGTTGTGAGAACAA+TGG 0.804411 3_4:+31904577 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTATTTAATTTTTAAT+TGG - chr3_4:31904475-31904494 Msa0497680:CDS 0.0%
!!! CTTTATTTAAAATCAAAATA+TGG - chr3_4:31903884-31903903 Msa0497680:intron 10.0%
!!! AATAATAAAAGTTACAATTT+TGG - chr3_4:31904420-31904439 Msa0497680:CDS 10.0%
!!! ATTATTTAATTTTTAATTGG+AGG - chr3_4:31904478-31904497 Msa0497680:CDS 10.0%
!! TAATTTAAATATTAGAAGTT+AGG - chr3_4:31906733-31906752 Msa0497680:intron 10.0%
!! AATTTAAATATTAGAAGTTA+GGG - chr3_4:31906734-31906753 Msa0497680:intron 10.0%
!!! AGAATTGTTTTTTAAATAGA+CGG - chr3_4:31903814-31903833 Msa0497680:intron 15.0%
!! ATATTCTAAATTCTAATTGA+TGG - chr3_4:31904659-31904678 Msa0497680:intron 15.0%
!! TATATATCAACAATATCTAT+TGG + chr3_4:31905031-31905050 None:intergenic 15.0%
!! ATGTAAAATAATTTAACAGA+TGG + chr3_4:31907064-31907083 None:intergenic 15.0%
!! AGATTATAAAATTTGGTAAA+TGG + chr3_4:31907793-31907812 None:intergenic 15.0%
!! AAACTGTAGATTATAAAATT+TGG + chr3_4:31907800-31907819 None:intergenic 15.0%
!! TGAAATTATTAATAACCATT+AGG - chr3_4:31907951-31907970 Msa0497680:intron 15.0%
!! ATAATTGAAAATGCAAAAAA+AGG - chr3_4:31908269-31908288 Msa0497680:intron 15.0%
!! TAATTGAAAATGCAAAAAAA+GGG - chr3_4:31908270-31908289 Msa0497680:intron 15.0%
!!! AAAAAATACAAAACCATTTT+AGG - chr3_4:31909724-31909743 Msa0497680:CDS 15.0%
!!! AAAAATACAAAACCATTTTA+GGG - chr3_4:31909725-31909744 Msa0497680:CDS 15.0%
!!! TCGCATTAATATTTTTTTTT+TGG - chr3_4:31910166-31910185 Msa0497680:CDS 15.0%
!!! ATATTTTTTTTTTGGTTACA+AGG - chr3_4:31910174-31910193 Msa0497680:CDS 15.0%
!! AAAAAAACATATTACTCTCA+TGG - chr3_4:31902657-31902676 Msa0497680:three_prime_UTR 20.0%
!!! ATTCATTTTAGTGAAAAGAA+TGG - chr3_4:31903043-31903062 Msa0497680:intron 20.0%
!!! AATGGAAGTATTATTAGTTA+TGG - chr3_4:31903061-31903080 Msa0497680:intron 20.0%
!!! ATGGAAGTATTATTAGTTAT+GGG - chr3_4:31903062-31903081 Msa0497680:intron 20.0%
!!! AAATCAAAATATGGGTTTTA+TGG - chr3_4:31903893-31903912 Msa0497680:intron 20.0%
!! AGAATTATGATCAAAATCAA+TGG - chr3_4:31903960-31903979 Msa0497680:intron 20.0%
!!! AAAATCTGGGTTTAAAATTT+TGG - chr3_4:31904206-31904225 Msa0497680:intron 20.0%
!!! TGGAACTACAATTTTAAAAT+TGG - chr3_4:31904365-31904384 Msa0497680:intron 20.0%
!! TTGTTGATATATAGAAAACA+AGG - chr3_4:31905038-31905057 Msa0497680:CDS 20.0%
!!! CATATCAAGGTTTTAAATAA+AGG + chr3_4:31905180-31905199 None:intergenic 20.0%
!!! TTATTTTATCTATTTGCAGA+TGG - chr3_4:31905810-31905829 Msa0497680:intron 20.0%
!! TAGAACATATTCATCTAAAA+GGG + chr3_4:31906109-31906128 None:intergenic 20.0%
!! ATAGAACATATTCATCTAAA+AGG + chr3_4:31906110-31906129 None:intergenic 20.0%
!!! TTTTAGATGAATATGTTCTA+TGG - chr3_4:31906109-31906128 Msa0497680:intron 20.0%
!! TATGGTTCAAATAATTTACT+CGG - chr3_4:31906183-31906202 Msa0497680:CDS 20.0%
!! GACAGAATGATATTTATATA+CGG - chr3_4:31906222-31906241 Msa0497680:CDS 20.0%
!! AATATAATCCCAAATGAAAT+GGG - chr3_4:31906293-31906312 Msa0497680:CDS 20.0%
!!! GCAATAAAACTTTTCATTTT+CGG - chr3_4:31906845-31906864 Msa0497680:intron 20.0%
!! ATGGAAAATATTTCAGATAT+AGG + chr3_4:31906933-31906952 None:intergenic 20.0%
!! TTATTCTCAAATTACTTTCA+GGG - chr3_4:31907182-31907201 Msa0497680:intron 20.0%
!!! AATCAGTTATTTTGTCTATT+AGG - chr3_4:31907227-31907246 Msa0497680:CDS 20.0%
!! TCTTTCTTTAAATCAACATT+TGG + chr3_4:31907400-31907419 None:intergenic 20.0%
!!! ATACTGATTTTATAGAATCT+GGG + chr3_4:31907891-31907910 None:intergenic 20.0%
!! TTTCAAATAATACAAACTAG+CGG + chr3_4:31907936-31907955 None:intergenic 20.0%
!!! AAAGCATATATTTTCTCAAA+AGG - chr3_4:31908169-31908188 Msa0497680:CDS 20.0%
!!! AATTTGAGTTATTTACCTAT+AGG + chr3_4:31908855-31908874 None:intergenic 20.0%
!! AAATGCAGTTAAAAAATCTA+CGG + chr3_4:31909007-31909026 None:intergenic 20.0%
! ATTAGGAAAATGAAGAAGAT+TGG + chr3_4:31902719-31902738 None:intergenic 25.0%
! AGGATAATTAAGAATAATCC+TGG - chr3_4:31902926-31902945 Msa0497680:CDS 25.0%
!!! ATAAGAATGAAGTTGATGAT+TGG - chr3_4:31902987-31903006 Msa0497680:CDS 25.0%
!!! ATCGTTGTTTTTTAAATAGC+TGG - chr3_4:31903232-31903251 Msa0497680:intron 25.0%
!! TTTTAAATAGCTGACATGTT+TGG - chr3_4:31903481-31903500 Msa0497680:intron 25.0%
!! TTTTAAATAGCTGATGTGTT+TGG - chr3_4:31903639-31903658 Msa0497680:CDS 25.0%
!! GATCAAGGTTTAAAACAAAA+GGG + chr3_4:31903851-31903870 None:intergenic 25.0%
!! TGATCAAGGTTTAAAACAAA+AGG + chr3_4:31903852-31903871 None:intergenic 25.0%
!!! AGAGTAAACAATTTTGATCA+AGG + chr3_4:31903866-31903885 None:intergenic 25.0%
! ATACCATAACCATTACTAAT+TGG + chr3_4:31904069-31904088 None:intergenic 25.0%
! TCGTTTGTATAATCAAAATC+TGG - chr3_4:31904192-31904211 Msa0497680:intron 25.0%
! CGTTTGTATAATCAAAATCT+GGG - chr3_4:31904193-31904212 Msa0497680:intron 25.0%
! AATGATATTGCATAGAATTG+TGG - chr3_4:31904260-31904279 Msa0497680:CDS 25.0%
!!! TCAAAGTCAGGTTTTAAAAT+TGG - chr3_4:31904324-31904343 Msa0497680:intron 25.0%
!! AATTGGAACTACAATTTTTG+TGG - chr3_4:31904341-31904360 Msa0497680:intron 25.0%
!! TTGGAACTACAATTTTTGTA+TGG - chr3_4:31904384-31904403 Msa0497680:CDS 25.0%
!!! AAAGTCAAGGTTTTAAATAG+CGG - chr3_4:31904508-31904527 Msa0497680:CDS 25.0%
! TATTGATCTTAGTATTCACA+TGG + chr3_4:31905005-31905024 None:intergenic 25.0%
! TGTGAATACTAAGATCAATA+TGG - chr3_4:31905005-31905024 Msa0497680:CDS 25.0%
!! AAACACTTTAGTTCATATCA+AGG + chr3_4:31905193-31905212 None:intergenic 25.0%
!! ACAGAAAGTATAAATGGTAA+AGG + chr3_4:31905531-31905550 None:intergenic 25.0%
!! GAAAAGACAGAAAGTATAAA+TGG + chr3_4:31905537-31905556 None:intergenic 25.0%
!! ATACTTTCTGTCTTTTCATT+TGG - chr3_4:31905540-31905559 Msa0497680:intron 25.0%
!! TACTTTCTGTCTTTTCATTT+GGG - chr3_4:31905541-31905560 Msa0497680:intron 25.0%
! TCTGTATTATGTGAATTTGA+TGG - chr3_4:31905569-31905588 Msa0497680:intron 25.0%
! AAACAAAAGGAGAAAATACT+AGG + chr3_4:31905606-31905625 None:intergenic 25.0%
! TTTCATTCGTAAATCATCTT+CGG - chr3_4:31905655-31905674 Msa0497680:CDS 25.0%
! GAAACAATAACCATAAATCT+CGG + chr3_4:31905876-31905895 None:intergenic 25.0%
!! TCTTAAATGGAAACAAGTTT+TGG + chr3_4:31906068-31906087 None:intergenic 25.0%
! AAAGTCAAAGTCTTCTTAAA+TGG + chr3_4:31906081-31906100 None:intergenic 25.0%
! GATTATATTGTCAAAGTAGA+TGG + chr3_4:31906282-31906301 None:intergenic 25.0%
! CAATATAATCCCAAATGAAA+TGG - chr3_4:31906292-31906311 Msa0497680:CDS 25.0%
! AACCAAATTTAAATATACCG+GGG + chr3_4:31906651-31906670 None:intergenic 25.0%
! CAACCAAATTTAAATATACC+GGG + chr3_4:31906652-31906671 None:intergenic 25.0%
! GCAACCAAATTTAAATATAC+CGG + chr3_4:31906653-31906672 None:intergenic 25.0%
!! TTTTGCATGAAAAAAGACAA+AGG + chr3_4:31906780-31906799 None:intergenic 25.0%
!! CTGAAATATTTTCCATTAGT+TGG - chr3_4:31906937-31906956 Msa0497680:CDS 25.0%
! TTGTATGATTGTTTAAGAGA+TGG + chr3_4:31907021-31907040 None:intergenic 25.0%
! TATTGAAACACGAAATATGT+GGG + chr3_4:31907093-31907112 None:intergenic 25.0%
! ATATTGAAACACGAAATATG+TGG + chr3_4:31907094-31907113 None:intergenic 25.0%
! CGTGTTTCAATATGAAAATT+TGG - chr3_4:31907101-31907120 Msa0497680:intron 25.0%
!! GATTGTAATTTTCTCCTAAT+AGG - chr3_4:31907128-31907147 Msa0497680:intron 25.0%
! GTTATTCTCAAATTACTTTC+AGG - chr3_4:31907181-31907200 Msa0497680:intron 25.0%
! TCAAACATTCGAAAGATTAT+TGG - chr3_4:31907493-31907512 Msa0497680:CDS 25.0%
! TACAAGAAAATAATGAGAGA+TGG + chr3_4:31907540-31907559 None:intergenic 25.0%
! GCTCTAATATCATATTGAAT+TGG - chr3_4:31907661-31907680 Msa0497680:intron 25.0%
!! AATTTTCTGATTGTCTAACT+CGG - chr3_4:31907684-31907703 Msa0497680:intron 25.0%
!!! AACTCTTCTCTAGAATTAAA+GGG - chr3_4:31907860-31907879 Msa0497680:intron 25.0%
!!! TACTGATTTTATAGAATCTG+GGG + chr3_4:31907890-31907909 None:intergenic 25.0%
!!! CATACTGATTTTATAGAATC+TGG + chr3_4:31907892-31907911 None:intergenic 25.0%
! ATAAAATCAGTATGTTATCC+AGG - chr3_4:31907898-31907917 Msa0497680:intron 25.0%
! TCATCCAAAATGACTAATTT+GGG + chr3_4:31908113-31908132 None:intergenic 25.0%
! TTCATCCAAAATGACTAATT+TGG + chr3_4:31908114-31908133 None:intergenic 25.0%
!!! ATATATCCTTTTTTGCATAC+CGG + chr3_4:31908137-31908156 None:intergenic 25.0%
!! ATTCTTATTTCTTAGACTAC+TGG - chr3_4:31908212-31908231 Msa0497680:intron 25.0%
!! AATATTTTCGCGACAAAAAT+TGG - chr3_4:31908557-31908576 Msa0497680:intron 25.0%
! ACACAAAATGAATCATAACA+TGG - chr3_4:31909089-31909108 Msa0497680:intron 25.0%
!! CAAATTCTTCTTTTCTATCT+TGG + chr3_4:31909192-31909211 None:intergenic 25.0%
! CAAGATAGAAAAGAAGAATT+TGG - chr3_4:31909190-31909209 Msa0497680:intron 25.0%
! CTCAATAAATCAATTCAAAC+AGG + chr3_4:31909472-31909491 None:intergenic 25.0%
!!! CTATTTCCATAAGTTGTTTT+CGG - chr3_4:31909535-31909554 Msa0497680:intron 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG - chr3_4:31909681-31909700 Msa0497680:intron 25.0%
!!! TTTTATGGTAGAAGTATACT+GGG - chr3_4:31909909-31909928 Msa0497680:CDS 25.0%
! AAATGAAAGGAAATAGAGAA+TGG - chr3_4:31910134-31910153 Msa0497680:CDS 25.0%
! AGCTTTTATTGCTTTGTCTA+TGG + chr3_4:31902747-31902766 None:intergenic 30.0%
TAGAGAAATACCTGTTGAAA+AGG - chr3_4:31902949-31902968 Msa0497680:CDS 30.0%
TTTCTGAACACTAGTAGAAT+TGG + chr3_4:31903095-31903114 None:intergenic 30.0%
GATGCTATTAGTACTAGTTA+CGG - chr3_4:31903293-31903312 Msa0497680:intron 30.0%
! TTTTAAATAGCTGACATGTC+TGG - chr3_4:31903356-31903375 Msa0497680:intron 30.0%
ACTAGTACTAATTGTGTGTT+CGG + chr3_4:31903425-31903444 None:intergenic 30.0%
! TATGGTCTTAGTTATAGTCA+TGG - chr3_4:31903911-31903930 Msa0497680:intron 30.0%
TGCATTCATCCAATTAGTAA+TGG - chr3_4:31904057-31904076 Msa0497680:intron 30.0%
CATCCAATTAGTAATGGTTA+TGG - chr3_4:31904063-31904082 Msa0497680:intron 30.0%
!! TTTGGTCTTAGTTATAGTCA+TGG - chr3_4:31904224-31904243 Msa0497680:CDS 30.0%
ACTTTGATTATTCCTCCAAT+TGG + chr3_4:31904311-31904330 None:intergenic 30.0%
GTACTAAAAAATGTCGATCA+AGG + chr3_4:31904452-31904471 None:intergenic 30.0%
TGGAGGAATAATAAAAGTCA+AGG - chr3_4:31904495-31904514 Msa0497680:CDS 30.0%
! ACCAAATGAAGTGTCAATTA+TGG - chr3_4:31904583-31904602 Msa0497680:CDS 30.0%
ACCATAATTGACACTTCATT+TGG + chr3_4:31904587-31904606 None:intergenic 30.0%
! AATTTTTGCATTCTCAACAC+AGG + chr3_4:31904913-31904932 None:intergenic 30.0%
ATTTGAAGAATATAGGCACT+AGG + chr3_4:31904940-31904959 None:intergenic 30.0%
TGCCTATATTCTTCAAATAC+TGG - chr3_4:31904942-31904961 Msa0497680:intron 30.0%
GACCAGTATTTGAAGAATAT+AGG + chr3_4:31904947-31904966 None:intergenic 30.0%
ACTAAGGTGTACTAATTCTA+AGG + chr3_4:31904982-31905001 None:intergenic 30.0%
!! AATCATGTTTGTTGTTGTCA+TGG - chr3_4:31905287-31905306 Msa0497680:intron 30.0%
!!! TTTCTCCTTTTGTTTTAGAC+TGG - chr3_4:31905611-31905630 Msa0497680:CDS 30.0%
!!! TTCTCCTTTTGTTTTAGACT+GGG - chr3_4:31905612-31905631 Msa0497680:CDS 30.0%
AATGAAAGCTGATAACAAGA+AGG + chr3_4:31905642-31905661 None:intergenic 30.0%
TACTGAGTACTTCAAATCAA+TGG - chr3_4:31905764-31905783 Msa0497680:intron 30.0%
AATCTTACTGAAATGCTGAA+TGG + chr3_4:31906162-31906181 None:intergenic 30.0%
AGCATTTCAGTAAGATTCTA+TGG - chr3_4:31906165-31906184 Msa0497680:intron 30.0%
TGATATTTATATACGGCTTC+TGG - chr3_4:31906229-31906248 Msa0497680:CDS 30.0%
ACTTTCTAAATCCTCGTTAT+TGG - chr3_4:31906336-31906355 Msa0497680:CDS 30.0%
GTGAAAGAAATGCGAAAAAA+CGG + chr3_4:31906463-31906482 None:intergenic 30.0%
! TCACAACATTTTCTTCTTCA+AGG + chr3_4:31906558-31906577 None:intergenic 30.0%
TACCCCGGTATATTTAAATT+TGG - chr3_4:31906646-31906665 Msa0497680:CDS 30.0%
TGCAATTCTACTATACAACA+TGG - chr3_4:31906985-31907004 Msa0497680:CDS 30.0%
ATCATACAAACTGAATATGC+AGG - chr3_4:31907032-31907051 Msa0497680:CDS 30.0%
!! TCCTTTACAGCATTGATTTA+TGG - chr3_4:31907442-31907461 Msa0497680:CDS 30.0%
!! CCTTTACAGCATTGATTTAT+GGG - chr3_4:31907443-31907462 Msa0497680:CDS 30.0%
!! AGCATTGATTTATGGGAATT+CGG - chr3_4:31907450-31907469 Msa0497680:CDS 30.0%
TATATACGCAATCGTACTAT+AGG + chr3_4:31907758-31907777 None:intergenic 30.0%
ATCTACAGTTTGATATCCTA+TGG - chr3_4:31907809-31907828 Msa0497680:intron 30.0%
TCTACAGTTTGATATCCTAT+GGG - chr3_4:31907810-31907829 Msa0497680:intron 30.0%
!! GAACTCTTCTCTAGAATTAA+AGG - chr3_4:31907859-31907878 Msa0497680:intron 30.0%
! ATTTTCAGCAGATTTCCTAA+TGG + chr3_4:31907969-31907988 None:intergenic 30.0%
GTAGATTACAGAAACATCAT+TGG - chr3_4:31907989-31908008 Msa0497680:intron 30.0%
CATCCAAAATGACTAATTTG+GGG + chr3_4:31908112-31908131 None:intergenic 30.0%
!! ATTAGTCATTTTGGATGAAC+CGG - chr3_4:31908115-31908134 Msa0497680:CDS 30.0%
TATTTCTTAGACTACTGGTA+TGG - chr3_4:31908217-31908236 Msa0497680:intron 30.0%
TGCTGCAAAAAACAATTCAT+GGG + chr3_4:31908590-31908609 None:intergenic 30.0%
ATGCTGCAAAAAACAATTCA+TGG + chr3_4:31908591-31908610 None:intergenic 30.0%
TTTAGATGTAGTACCAAAAG+AGG - chr3_4:31908610-31908629 Msa0497680:intron 30.0%
! AAGTTATTGTTCTCCTCTTT+TGG + chr3_4:31908626-31908645 None:intergenic 30.0%
AGAAAAGAAAGCTTACTGTA+AGG + chr3_4:31908685-31908704 None:intergenic 30.0%
! TACAGTAAGCTTTCTTTTCT+TGG - chr3_4:31908685-31908704 Msa0497680:intron 30.0%
TAATCAACATAACTGTAGCA+TGG + chr3_4:31908745-31908764 None:intergenic 30.0%
! ATTTACCTATAGGTGTTATG+AGG + chr3_4:31908845-31908864 None:intergenic 30.0%
! GAATAGGTTTTCATGCATAA+AGG + chr3_4:31908916-31908935 None:intergenic 30.0%
AATCATAACATGGAAGATTG+TGG - chr3_4:31909099-31909118 Msa0497680:intron 30.0%
TTTCTTGAATATTGCAAAGC+AGG - chr3_4:31909255-31909274 Msa0497680:intron 30.0%
TCAATTTCTTGAGAATTGAG+AGG + chr3_4:31909384-31909403 None:intergenic 30.0%
! TCAAGAAATTGAGTTCTAGT+TGG - chr3_4:31909392-31909411 Msa0497680:intron 30.0%
CGAAAACAACTTATGGAAAT+AGG + chr3_4:31909537-31909556 None:intergenic 30.0%
AATAAGCCGAAAACAACTTA+TGG + chr3_4:31909544-31909563 None:intergenic 30.0%
CTTATTTCGATAAGTTCTTG+AGG - chr3_4:31909558-31909577 Msa0497680:intron 30.0%
!! TTTTCACCAGTACTAGTTTA+TGG + chr3_4:31909708-31909727 None:intergenic 30.0%
! AAAAAGAGTAATCTCTAGAG+AGG + chr3_4:31909755-31909774 None:intergenic 30.0%
CAAAAAATTGCTAGTTGTCA+TGG + chr3_4:31909803-31909822 None:intergenic 30.0%
! ATAATTTTGCAGATTCCTGT+AGG - chr3_4:31909835-31909854 Msa0497680:CDS 30.0%
!! GTTTTATGGTAGAAGTATAC+TGG - chr3_4:31909908-31909927 Msa0497680:CDS 30.0%
! AAGTTAGTTCAGACAGTTTT+CGG - chr3_4:31910070-31910089 Msa0497680:CDS 30.0%
ACTCAGGATAGAAAAATGAA+AGG - chr3_4:31910121-31910140 Msa0497680:CDS 30.0%
TATATGTTGTCAGTTGGAAT+CGG - chr3_4:31910206-31910225 Msa0497680:CDS 30.0%
AAATGAAGAAGATTGGTGAG+AGG + chr3_4:31902712-31902731 None:intergenic 35.0%
ATTGATGGAGATGGAATCAA+TGG + chr3_4:31902812-31902831 None:intergenic 35.0%
ATGAAGAATTTCTCCTCACA+AGG + chr3_4:31902839-31902858 None:intergenic 35.0%
CTCCAAACGAAATCATAACA+CGG + chr3_4:31902869-31902888 None:intergenic 35.0%
TGTTATGATTTCGTTTGGAG+CGG - chr3_4:31902869-31902888 Msa0497680:CDS 35.0%
TCAACAATCGTACGAAACTT+TGG + chr3_4:31902905-31902924 None:intergenic 35.0%
AGTTTCGTACGATTGTTGAT+AGG - chr3_4:31902906-31902925 Msa0497680:CDS 35.0%
! AAACTCTTCACCTTTTCAAC+AGG + chr3_4:31902962-31902981 None:intergenic 35.0%
TCACTAAAATGAATAGCACC+AGG + chr3_4:31903037-31903056 None:intergenic 35.0%
GGCAACTGAAAATCAAAAGT+AGG + chr3_4:31903136-31903155 None:intergenic 35.0%
GAAATCGCTAGGTTTCTTAT+TGG - chr3_4:31903178-31903197 Msa0497680:intron 35.0%
GAGTACATCAGAATCATGAT+GGG - chr3_4:31903388-31903407 Msa0497680:intron 35.0%
AGGTAAGTTTGTCAGAATCA+CGG - chr3_4:31903509-31903528 Msa0497680:intron 35.0%
ACTGGTACTACTTGTATGTT+CGG + chr3_4:31903574-31903593 None:intergenic 35.0%
CATACAAGTAGTACCAGTTA+TGG - chr3_4:31903576-31903595 Msa0497680:CDS 35.0%
!! AGCTGACATGTTTGTTATCT+CGG - chr3_4:31903781-31903800 Msa0497680:intron 35.0%
TAATTGGATGAATGCACGTT+TGG + chr3_4:31904053-31904072 None:intergenic 35.0%
ACGGATAAATTTGACAGATG+TGG - chr3_4:31904102-31904121 Msa0497680:intron 35.0%
CTGATGTATGTAGTTCCAAT+TGG - chr3_4:31904293-31904312 Msa0497680:intron 35.0%
ATGTATGTAGTTCCAATTGG+AGG - chr3_4:31904296-31904315 Msa0497680:intron 35.0%
TTGGAGGAATAATCAAAGTC+AGG - chr3_4:31904312-31904331 Msa0497680:intron 35.0%
! GGAACTACAATTTTTGTGGT+TGG - chr3_4:31904345-31904364 Msa0497680:intron 35.0%
ATTGACACTTCATTTGGTTG+TGG + chr3_4:31904581-31904600 None:intergenic 35.0%
! TGAAGTGTCAATTATGGTCA+CGG - chr3_4:31904589-31904608 Msa0497680:CDS 35.0%
! CAAGTGGAATGTGTTTTTCA+AGG - chr3_4:31904709-31904728 Msa0497680:intron 35.0%
ATTGATCCAACTGTAGAGAA+AGG + chr3_4:31904758-31904777 None:intergenic 35.0%
TTTCTCTACAGTTGGATCAA+TGG - chr3_4:31904757-31904776 Msa0497680:intron 35.0%
TTCTCTACAGTTGGATCAAT+GGG - chr3_4:31904758-31904777 Msa0497680:intron 35.0%
GCAGTTGCAAGAAAAAATGT+TGG + chr3_4:31904785-31904804 None:intergenic 35.0%
CGTTCTTCAGATAAGTTCAT+TGG - chr3_4:31904817-31904836 Msa0497680:CDS 35.0%
! CTTAGTATTCACATGGACTA+AGG + chr3_4:31904998-31905017 None:intergenic 35.0%
GTGGTTAAATGTAGCTGATA+TGG - chr3_4:31905101-31905120 Msa0497680:intron 35.0%
!! TTGTCATGGCGTTTTTGTTT+GGG - chr3_4:31905301-31905320 Msa0497680:intron 35.0%
! TCTCTTCTCTTAGTTCTTAC+TGG - chr3_4:31905409-31905428 Msa0497680:CDS 35.0%
CTTCCTATTTGAACTCAACA+TGG - chr3_4:31905492-31905511 Msa0497680:intron 35.0%
TCACCATGTTGAGTTCAAAT+AGG + chr3_4:31905498-31905517 None:intergenic 35.0%
! CAAACCCAGTCTAAAACAAA+AGG + chr3_4:31905619-31905638 None:intergenic 35.0%
CATGAAGCCGACAATAAATA+CGG + chr3_4:31905699-31905718 None:intergenic 35.0%
CTTCTCATTCTTTCATGACA+AGG - chr3_4:31905739-31905758 Msa0497680:intron 35.0%
ATAAATCTCGGTAATGACCA+GGG + chr3_4:31905864-31905883 None:intergenic 35.0%
GTTTCAACTCCTGAAGATAA+CGG - chr3_4:31905940-31905959 Msa0497680:intron 35.0%
TTTCAACTCCTGAAGATAAC+GGG - chr3_4:31905941-31905960 Msa0497680:intron 35.0%
!! ATGGAAACAAGTTTTGGTGT+TGG + chr3_4:31906062-31906081 None:intergenic 35.0%
TACTGAAATGCTGAATGGAA+GGG + chr3_4:31906157-31906176 None:intergenic 35.0%
TTACTGAAATGCTGAATGGA+AGG + chr3_4:31906158-31906177 None:intergenic 35.0%
! TTTTCGCATTTCTTTCACAG+AGG - chr3_4:31906465-31906484 Msa0497680:intron 35.0%
TTTCGCATTTCTTTCACAGA+GGG - chr3_4:31906466-31906485 Msa0497680:intron 35.0%
ATGCAAAACAACTGCTCATA+GGG - chr3_4:31906792-31906811 Msa0497680:intron 35.0%
TATACATGGTTTAACCCCAA+AGG - chr3_4:31906905-31906924 Msa0497680:CDS 35.0%
TTTCAGATATAGGAGCCTTT+GGG + chr3_4:31906923-31906942 None:intergenic 35.0%
ATTTCAGATATAGGAGCCTT+TGG + chr3_4:31906924-31906943 None:intergenic 35.0%
AAATTACTTTCAGGGCTTGT+GGG - chr3_4:31907190-31907209 Msa0497680:intron 35.0%
! TTTTGTCTATTAGGACCCAA+TGG - chr3_4:31907236-31907255 Msa0497680:CDS 35.0%
ACAGCTATTAGTTGTTTGAC+AGG - chr3_4:31907272-31907291 Msa0497680:intron 35.0%
CAGCTATTAGTTGTTTGACA+GGG - chr3_4:31907273-31907292 Msa0497680:intron 35.0%
CCCATAAATCAATGCTGTAA+AGG + chr3_4:31907446-31907465 None:intergenic 35.0%
GGCAAACTTAATTCTAACAG+TGG + chr3_4:31907577-31907596 None:intergenic 35.0%
AGACGTTGCTATATCTATCA+GGG - chr3_4:31907601-31907620 Msa0497680:intron 35.0%
CGCACAACTTGTATTTATAG+TGG - chr3_4:31907709-31907728 Msa0497680:intron 35.0%
! TAATTCTAGAGAAGAGTTCG+AGG + chr3_4:31907858-31907877 None:intergenic 35.0%
AGTGTTGCAATTGCACTTAT+CGG - chr3_4:31908083-31908102 Msa0497680:CDS 35.0%
! TGACCCCAAATTAGTCATTT+TGG - chr3_4:31908106-31908125 Msa0497680:CDS 35.0%
AGAATGTGTTGTGAGAACAA+TGG + chr3_4:31908300-31908319 None:intergenic 35.0%
TGTTCTCACAACACATTCTA+TGG - chr3_4:31908301-31908320 Msa0497680:intron 35.0%
! ATCAGATTGAAGTCACGTTT+TGG - chr3_4:31908395-31908414 Msa0497680:intron 35.0%
CATGAGGAATCACATAAGTT+AGG + chr3_4:31908649-31908668 None:intergenic 35.0%
TATAGCCTCATAACACCTAT+AGG - chr3_4:31908837-31908856 Msa0497680:intron 35.0%
TTTCATGCATAAAGGAGACA+CGG + chr3_4:31908908-31908927 None:intergenic 35.0%
CAGACAGGATTCATTTGAAT+AGG + chr3_4:31908932-31908951 None:intergenic 35.0%
TGTAACATTAAGCAACAGAC+AGG + chr3_4:31908947-31908966 None:intergenic 35.0%
CTACGGACAAATGCAAATTT+AGG + chr3_4:31908990-31909009 None:intergenic 35.0%
AAGATTGTGGTTACTTCGAT+TGG - chr3_4:31909112-31909131 Msa0497680:intron 35.0%
! CGTATAACCGCATTTTCTTT+CGG - chr3_4:31909352-31909371 Msa0497680:intron 35.0%
GCATATACCGAAAGAAAATG+CGG + chr3_4:31909362-31909381 None:intergenic 35.0%
! TACTAGTTTATGGTCCTGTT+TGG + chr3_4:31909698-31909717 None:intergenic 35.0%
ACTTCTACCATAAAACCTGT+GGG + chr3_4:31909904-31909923 None:intergenic 35.0%
TACTTCTACCATAAAACCTG+TGG + chr3_4:31909905-31909924 None:intergenic 35.0%
TTGAGGAATATGAGCTTTCT+GGG + chr3_4:31909974-31909993 None:intergenic 35.0%
TTTGAGGAATATGAGCTTTC+TGG + chr3_4:31909975-31909994 None:intergenic 35.0%
! GATGGTAGTTGGATATTTTG+AGG + chr3_4:31909991-31910010 None:intergenic 35.0%
CTGTCTGAACTAACTTGATT+TGG + chr3_4:31910066-31910085 None:intergenic 35.0%
! TGATTCATGCTCAGTGATTT+TGG - chr3_4:31910093-31910112 Msa0497680:CDS 35.0%
! GATTCATGCTCAGTGATTTT+GGG - chr3_4:31910094-31910113 Msa0497680:CDS 35.0%
CACTTGTATATGTTGTCAGT+TGG - chr3_4:31910200-31910219 Msa0497680:CDS 35.0%
TATGTCGAGATGGAAGAATT+TGG - chr3_4:31910230-31910249 Msa0497680:CDS 35.0%
! TCTGTTTTGTGTGACAGAGA+GGG + chr3_4:31902562-31902581 None:intergenic 40.0%
! CATGACAAACGCTTTTACGT+TGG - chr3_4:31902607-31902626 Msa0497680:three_prime_UTR 40.0%
CTTTGTCTATGGCGAAGATT+AGG + chr3_4:31902736-31902755 None:intergenic 40.0%
ATGGAGATGGAATCAATGGT+GGG + chr3_4:31902808-31902827 None:intergenic 40.0%
CAAGGTTTGATTGATGGAGA+TGG + chr3_4:31902821-31902840 None:intergenic 40.0%
TCCATCAATCAAACCTTGTG+AGG - chr3_4:31902823-31902842 Msa0497680:CDS 40.0%
TCCTCACAAGGTTTGATTGA+TGG + chr3_4:31902827-31902846 None:intergenic 40.0%
TGCCGTGTTATGATTTCGTT+TGG - chr3_4:31902864-31902883 Msa0497680:CDS 40.0%
TCAACAGGTATTTCTCTACC+AGG + chr3_4:31902947-31902966 None:intergenic 40.0%
AAGAATCCTATGCAATGTCC+TGG - chr3_4:31903016-31903035 Msa0497680:CDS 40.0%
TCTACTAGTGTTCAGAAACG+TGG - chr3_4:31903097-31903116 Msa0497680:intron 40.0%
ATCGCTAGGTTTCTTATTGG+AGG - chr3_4:31903181-31903200 Msa0497680:intron 40.0%
! AGCTGGCATGTTTTGTATCA+CGG - chr3_4:31903249-31903268 Msa0497680:intron 40.0%
CGAGTACATCAGAATCATGA+TGG - chr3_4:31903387-31903406 Msa0497680:intron 40.0%
AGCTGACATGTTTGGTATCA+AGG - chr3_4:31903489-31903508 Msa0497680:intron 40.0%
ATCACTACCAATTGCGTGTT+CGG + chr3_4:31903550-31903569 None:intergenic 40.0%
TCTCAGCAGTATACCATAAC+TGG + chr3_4:31903592-31903611 None:intergenic 40.0%
AGCTGATGTGTTTGGTATCA+TGG - chr3_4:31903647-31903666 Msa0497680:CDS 40.0%
TGGTGAGTTTGTCAGAATCA+CGG - chr3_4:31903667-31903686 Msa0497680:CDS 40.0%
ACAGTGAGTTTGTCAGAATC+AGG - chr3_4:31904011-31904030 Msa0497680:intron 40.0%
CAGTGAGTTTGTCAGAATCA+GGG - chr3_4:31904012-31904031 Msa0497680:intron 40.0%
TGGTATACTGCTGAGAATCA+CGG - chr3_4:31904083-31904102 Msa0497680:intron 40.0%
! GACAGATGTGGTGTGAATTT+TGG - chr3_4:31904114-31904133 Msa0497680:intron 40.0%
!! CAAAATCTTTGATGACGCTG+CGG - chr3_4:31904150-31904169 Msa0497680:intron 40.0%
!!! GTCAAGGTTTTAAATAGCGG+TGG - chr3_4:31904511-31904530 Msa0497680:CDS 40.0%
! TTTTAGACCCAGACTTCAAG+TGG - chr3_4:31904693-31904712 Msa0497680:intron 40.0%
ACACATTCCACTTGAAGTCT+GGG + chr3_4:31904703-31904722 None:intergenic 40.0%
AACACATTCCACTTGAAGTC+TGG + chr3_4:31904704-31904723 None:intergenic 40.0%
GACTATGACTATACCATACC+TGG + chr3_4:31904868-31904887 None:intergenic 40.0%
ACTCACGATGCTTGATATTG+CGG - chr3_4:31905072-31905091 Msa0497680:intron 40.0%
! AGCTGATATGGTCTTAATCG+TGG - chr3_4:31905113-31905132 Msa0497680:intron 40.0%
TCTTAATCGTGGTTGCGTTA+CGG - chr3_4:31905124-31905143 Msa0497680:intron 40.0%
! GTTGTCATGGCGTTTTTGTT+TGG - chr3_4:31905300-31905319 Msa0497680:intron 40.0%
!! ATGGCGTTTTTGTTTGGGAT+AGG - chr3_4:31905306-31905325 Msa0497680:intron 40.0%
! ACTCTGCATACTGGTTATCA+TGG - chr3_4:31905353-31905372 Msa0497680:intron 40.0%
GGCTTCTCCGTATTTATTGT+CGG - chr3_4:31905689-31905708 Msa0497680:intron 40.0%
TTGCAGATGGTATCAACAGT+AGG - chr3_4:31905823-31905842 Msa0497680:intron 40.0%
!! GGAGGTGTAAAAATTTTCCC+TGG - chr3_4:31905844-31905863 Msa0497680:intron 40.0%
CATAAATCTCGGTAATGACC+AGG + chr3_4:31905865-31905884 None:intergenic 40.0%
CTGGTCATTACCGAGATTTA+TGG - chr3_4:31905863-31905882 Msa0497680:intron 40.0%
TTCAACTCCTGAAGATAACG+GGG - chr3_4:31905942-31905961 Msa0497680:intron 40.0%
GAATGGAAGGGAGGAATAAA+AGG + chr3_4:31906145-31906164 None:intergenic 40.0%
TCCTCACACCCATTTCATTT+GGG + chr3_4:31906304-31906323 None:intergenic 40.0%
TTCCTCACACCCATTTCATT+TGG + chr3_4:31906305-31906324 None:intergenic 40.0%
CTAAATCCTCGTTATTGGAC+AGG - chr3_4:31906341-31906360 Msa0497680:CDS 40.0%
GTAGTTGCATATCTTCAACC+CGG - chr3_4:31906497-31906516 Msa0497680:intron 40.0%
! TGATGCAAATGTTGCTGTTC+AGG - chr3_4:31906603-31906622 Msa0497680:CDS 40.0%
! AATGTTGCTGTTCAGGTACA+AGG - chr3_4:31906610-31906629 Msa0497680:CDS 40.0%
TTTACCTTAACAGCGTGGTA+AGG + chr3_4:31906700-31906719 None:intergenic 40.0%
GATGATTTACCTTAACAGCG+TGG + chr3_4:31906705-31906724 None:intergenic 40.0%
CATGCAAAACAACTGCTCAT+AGG - chr3_4:31906791-31906810 Msa0497680:intron 40.0%
TGCAAAACAACTGCTCATAG+GGG - chr3_4:31906793-31906812 Msa0497680:intron 40.0%
!! AGCATCGACTGCATTATACA+TGG - chr3_4:31906891-31906910 Msa0497680:CDS 40.0%
TTCAGATATAGGAGCCTTTG+GGG + chr3_4:31906922-31906941 None:intergenic 40.0%
ATGCATAGGTCACTCCTATT+AGG + chr3_4:31907145-31907164 None:intergenic 40.0%
TAATAGGAGTGACCTATGCA+TGG - chr3_4:31907144-31907163 Msa0497680:intron 40.0%
CAAATTACTTTCAGGGCTTG+TGG - chr3_4:31907189-31907208 Msa0497680:intron 40.0%
TAGATATAGCAACGTCTGGT+TGG + chr3_4:31907598-31907617 None:intergenic 40.0%
CTGATAGATATAGCAACGTC+TGG + chr3_4:31907602-31907621 None:intergenic 40.0%
CAGACGTTGCTATATCTATC+AGG - chr3_4:31907600-31907619 Msa0497680:intron 40.0%
! TATTAGAGCATCTAGCTACC+AGG + chr3_4:31907650-31907669 None:intergenic 40.0%
ACAGTTTGATATCCTATGGG+AGG - chr3_4:31907813-31907832 Msa0497680:intron 40.0%
TACAGAAACATCATTGGCAG+AGG - chr3_4:31907995-31908014 Msa0497680:intron 40.0%
GTAACTTCCAGCTCTTACTT+TGG + chr3_4:31908039-31908058 None:intergenic 40.0%
GATGAACCGGTATGCAAAAA+AGG - chr3_4:31908128-31908147 Msa0497680:CDS 40.0%
CTGGTATGGATCCAATAACA+AGG - chr3_4:31908231-31908250 Msa0497680:intron 40.0%
GTATGGATCCAATAACAAGG+AGG - chr3_4:31908234-31908253 Msa0497680:intron 40.0%
! AATAACAAGGAGGCATGTGT+GGG - chr3_4:31908244-31908263 Msa0497680:intron 40.0%
CCTTTGCCATGATTCCTATA+CGG + chr3_4:31908349-31908368 None:intergenic 40.0%
CGTATAGGAATCATGGCAAA+GGG - chr3_4:31908347-31908366 Msa0497680:intron 40.0%
!! TTGAAGTCACGTTTTGGTAC+TGG - chr3_4:31908401-31908420 Msa0497680:intron 40.0%
AATGATCACAGTCCTGCAAA+TGG - chr3_4:31908455-31908474 Msa0497680:intron 40.0%
TGTGATTCCTCATGAAAGAG+AGG - chr3_4:31908655-31908674 Msa0497680:intron 40.0%
!! GGAGCTCTGAAAAGAAATTC+TGG + chr3_4:31909171-31909190 None:intergenic 40.0%
TGTCAAGGTCAAAGTCACTA+GGG + chr3_4:31909311-31909330 None:intergenic 40.0%
ATGTCAAGGTCAAAGTCACT+AGG + chr3_4:31909312-31909331 None:intergenic 40.0%
AAAATGCGGTTATACGTACC+TGG + chr3_4:31909348-31909367 None:intergenic 40.0%
TCTCTTGCAAAAAGTGAGCA+CGG - chr3_4:31909427-31909446 Msa0497680:intron 40.0%
!! CTCGAAAGTGCTTATGTAAG+TGG + chr3_4:31909500-31909519 None:intergenic 40.0%
ACAGGACCATAAACTAGTAC+TGG - chr3_4:31909699-31909718 Msa0497680:CDS 40.0%
TATTCAGTAGACTCTGATCC+TGG + chr3_4:31909880-31909899 None:intergenic 40.0%
! TGAATACCCCACAGGTTTTA+TGG - chr3_4:31909894-31909913 Msa0497680:CDS 40.0%
CTTCTACCATAAAACCTGTG+GGG + chr3_4:31909903-31909922 None:intergenic 40.0%
TCGAGATGGAAGAATTTGGA+GGG - chr3_4:31910234-31910253 Msa0497680:CDS 40.0%
! CTCTGTTTTGTGTGACAGAG+AGG + chr3_4:31902563-31902582 None:intergenic 45.0%
CTGTCACACAAAACAGAGAG+AGG - chr3_4:31902565-31902584 Msa0497680:three_prime_UTR 45.0%
TTGGTGAGAGGAGTTGAAGA+AGG + chr3_4:31902700-31902719 None:intergenic 45.0%
GATGGAGATGGAATCAATGG+TGG + chr3_4:31902809-31902828 None:intergenic 45.0%
ATAGCACCAGGACATTGCAT+AGG + chr3_4:31903025-31903044 None:intergenic 45.0%
TGTGATACCGAACACGCAAT+TGG - chr3_4:31903540-31903559 Msa0497680:intron 45.0%
TGAGTTTGTCAGAATCACGG+TGG - chr3_4:31903670-31903689 Msa0497680:CDS 45.0%
GAGTTTGTCAGAATCACGGT+GGG - chr3_4:31903671-31903690 Msa0497680:CDS 45.0%
! CGCAGCGTCATCAAAGATTT+TGG + chr3_4:31904152-31904171 None:intergenic 45.0%
TAGAGAAAGGAGCCATTCCT+GGG + chr3_4:31904745-31904764 None:intergenic 45.0%
ATGGCTCCTTTCTCTACAGT+TGG - chr3_4:31904749-31904768 Msa0497680:intron 45.0%
GAAAGAGCTTAAACTTCGCC+AGG - chr3_4:31904847-31904866 Msa0497680:CDS 45.0%
AGCTTAAACTTCGCCAGGTA+TGG - chr3_4:31904852-31904871 Msa0497680:CDS 45.0%
TTTGCATTCTCAACACAGGC+AGG + chr3_4:31904909-31904928 None:intergenic 45.0%
CTTGATATTGCGGAGAGTTG+TGG - chr3_4:31905082-31905101 Msa0497680:intron 45.0%
ACTGGTTATCATGGCTAACC+TGG - chr3_4:31905362-31905381 Msa0497680:intron 45.0%
CTGGTTATCATGGCTAACCT+GGG - chr3_4:31905363-31905382 Msa0497680:intron 45.0%
GAGTGTAACAACTGTTTCCC+AGG + chr3_4:31905383-31905402 None:intergenic 45.0%
TCATCTTCGGCAACAACAGT+CGG - chr3_4:31905668-31905687 Msa0497680:CDS 45.0%
!! TATTGTCGGCTTCATGACTC+AGG - chr3_4:31905703-31905722 Msa0497680:intron 45.0%
CAGATGGTATCAACAGTAGG+AGG - chr3_4:31905826-31905845 Msa0497680:intron 45.0%
CCTTGAGCAAAAGGATTAGG+CGG + chr3_4:31905898-31905917 None:intergenic 45.0%
AGGCCTTGAGCAAAAGGATT+AGG + chr3_4:31905901-31905920 None:intergenic 45.0%
CACACAGTCATCGTCGTTAA+CGG + chr3_4:31905995-31906014 None:intergenic 45.0%
TGAAATGCTGAATGGAAGGG+AGG + chr3_4:31906154-31906173 None:intergenic 45.0%
AACGAACCACAGAAAGAACG+TGG + chr3_4:31906255-31906274 None:intergenic 45.0%
TCCCAAATGAAATGGGTGTG+AGG - chr3_4:31906300-31906319 Msa0497680:CDS 45.0%
GACGGAGGACAAAAAGTGAA+AGG - chr3_4:31906365-31906384 Msa0497680:CDS 45.0%
GCATTTCTTTCACAGAGGGT+GGG - chr3_4:31906470-31906489 Msa0497680:intron 45.0%
TGGACTAAACTCTTCATGCC+GGG + chr3_4:31906518-31906537 None:intergenic 45.0%
! GTGGACTAAACTCTTCATGC+CGG + chr3_4:31906519-31906538 None:intergenic 45.0%
TCAAGGACGTCTTCATCATC+TGG + chr3_4:31906541-31906560 None:intergenic 45.0%
GTGAAGCAGCAACAAACACA+AGG - chr3_4:31906574-31906593 Msa0497680:CDS 45.0%
AGATGTCGAGAGCCAACTAA+TGG + chr3_4:31906952-31906971 None:intergenic 45.0%
CTTGATCATCAGCCATGCAT+AGG + chr3_4:31907159-31907178 None:intergenic 45.0%
CTATGCATGGCTGATGATCA+AGG - chr3_4:31907157-31907176 Msa0497680:intron 45.0%
TCTATTAGGACCCAATGGAG+CGG - chr3_4:31907241-31907260 Msa0497680:CDS 45.0%
! GTAGTTTTTCCCGCTCCATT+GGG + chr3_4:31907254-31907273 None:intergenic 45.0%
! TGTAGTTTTTCCCGCTCCAT+TGG + chr3_4:31907255-31907274 None:intergenic 45.0%
GGGATAACTCCAGTAACTGA+TGG - chr3_4:31907293-31907312 Msa0497680:intron 45.0%
ACTCCAGTAACTGATGGAGA+TGG - chr3_4:31907299-31907318 Msa0497680:intron 45.0%
TCACCATCTCCATCAGTTAC+TGG + chr3_4:31907305-31907324 None:intergenic 45.0%
TTGACATGCCAGTAGAGCTT+CGG + chr3_4:31907477-31907496 None:intergenic 45.0%
TGAGAGATGGAAAGACACCT+GGG + chr3_4:31907527-31907546 None:intergenic 45.0%
ATGAGAGATGGAAAGACACC+TGG + chr3_4:31907528-31907547 None:intergenic 45.0%
CAAACTAGCGGAACAAGTTC+AGG + chr3_4:31907924-31907943 None:intergenic 45.0%
GTAAGAGCTGGAAGTTACAG+TGG - chr3_4:31908041-31908060 Msa0497680:CDS 45.0%
! CACACATGCCTCCTTGTTAT+TGG + chr3_4:31908245-31908264 None:intergenic 45.0%
! CAATAACAAGGAGGCATGTG+TGG - chr3_4:31908243-31908262 Msa0497680:intron 45.0%
GACATTCTAAGCGACCGTAT+AGG - chr3_4:31908332-31908351 Msa0497680:intron 45.0%
AAGCGACCGTATAGGAATCA+TGG - chr3_4:31908340-31908359 Msa0497680:intron 45.0%
CCGTATAGGAATCATGGCAA+AGG - chr3_4:31908346-31908365 Msa0497680:intron 45.0%
ACGTGACTTCAATCTGATCG+AGG + chr3_4:31908393-31908412 None:intergenic 45.0%
CAAGAGTTGTTAGACCAAGC+TGG + chr3_4:31909228-31909247 None:intergenic 45.0%
!! TAGAAAGTGCTGCAGCTGAA+GGG - chr3_4:31909284-31909303 Msa0497680:intron 45.0%
GTGACTTTGACCTTGACATC+TGG - chr3_4:31909313-31909332 Msa0497680:intron 45.0%
TTGCAAAAAGTGAGCACGGA+TGG - chr3_4:31909431-31909450 Msa0497680:intron 45.0%
! TAGAGAGGCATGCCCTAAAA+TGG + chr3_4:31909740-31909759 None:intergenic 45.0%
TCCTGTAGGAGCTATGTATG+TGG - chr3_4:31909849-31909868 Msa0497680:CDS 45.0%
CCTGTAGGAGCTATGTATGT+GGG - chr3_4:31909850-31909869 Msa0497680:CDS 45.0%
GCTATGTATGTGGGATTTCC+AGG - chr3_4:31909859-31909878 Msa0497680:CDS 45.0%
TACTGGGAACAAGATGACAC+CGG - chr3_4:31909925-31909944 Msa0497680:CDS 45.0%
! GAATATGAGCTTTCTGGGAG+TGG + chr3_4:31909969-31909988 None:intergenic 45.0%
TTGCAGTAGCAGATGGTAGT+TGG + chr3_4:31910002-31910021 None:intergenic 45.0%
!!! AGTGATTTTGGGACACACTC+AGG - chr3_4:31910105-31910124 Msa0497680:CDS 45.0%
TGGAATCGGATATGTCGAGA+TGG - chr3_4:31910220-31910239 Msa0497680:CDS 45.0%
GTCGAGATGGAAGAATTTGG+AGG - chr3_4:31910233-31910252 Msa0497680:CDS 45.0%
CGAGATGGAAGAATTTGGAG+GGG - chr3_4:31910235-31910254 Msa0497680:CDS 45.0%
ATGGAAGAATTTGGAGGGGA+AGG - chr3_4:31910239-31910258 Msa0497680:CDS 45.0%
TGGAAGAATTTGGAGGGGAA+GGG - chr3_4:31910240-31910259 Msa0497680:CDS 45.0%
!!! TTTATTTAAAATCAAAATAT+GGG - chr3_4:31903885-31903904 Msa0497680:intron 5.0%
AGAGAGAGAAGAGGTGAGGA+AGG + chr3_4:31902531-31902550 None:intergenic 50.0%
TTGTGTGACAGAGAGGGAGA+GGG + chr3_4:31902556-31902575 None:intergenic 50.0%
TTTGTGTGACAGAGAGGGAG+AGG + chr3_4:31902557-31902576 None:intergenic 50.0%
CATTGACAGTGATGCAGCTG+TGG + chr3_4:31904545-31904564 None:intergenic 50.0%
CACAGCTGCATCACTGTCAA+TGG - chr3_4:31904543-31904562 Msa0497680:CDS 50.0%
GTAGAGAAAGGAGCCATTCC+TGG + chr3_4:31904746-31904765 None:intergenic 50.0%
GGATAGGCAATGACCGTGAT+GGG - chr3_4:31905322-31905341 Msa0497680:intron 50.0%
GATAGGCAATGACCGTGATG+GGG - chr3_4:31905323-31905342 Msa0497680:intron 50.0%
AGAGTCGTAAAGCCCCATCA+CGG + chr3_4:31905338-31905357 None:intergenic 50.0%
GGCTTTACGACTCTGCATAC+TGG - chr3_4:31905344-31905363 Msa0497680:intron 50.0%
! CCGCCTAATCCTTTTGCTCA+AGG - chr3_4:31905895-31905914 Msa0497680:intron 50.0%
ACACTCAGGCCTTGAGCAAA+AGG + chr3_4:31905907-31905926 None:intergenic 50.0%
CAGCTAACCCCGTTATCTTC+AGG + chr3_4:31905952-31905971 None:intergenic 50.0%
!! CTGAAGATAACGGGGTTAGC+TGG - chr3_4:31905950-31905969 Msa0497680:intron 50.0%
! CGATGACTGTGTGCTGACAA+TGG - chr3_4:31906002-31906021 Msa0497680:intron 50.0%
TTCTGGCCACGTTCTTTCTG+TGG - chr3_4:31906246-31906265 Msa0497680:CDS 50.0%
CCTCGTTATTGGACAGGAGA+CGG - chr3_4:31906347-31906366 Msa0497680:CDS 50.0%
CGCATTTCTTTCACAGAGGG+TGG - chr3_4:31906469-31906488 Msa0497680:intron 50.0%
AGGACGTCTTCATCATCTGG+TGG + chr3_4:31906538-31906557 None:intergenic 50.0%
GGCATTGTGAAGACTTACCC+CGG - chr3_4:31906631-31906650 Msa0497680:CDS 50.0%
TGCTCCTTACCACGCTGTTA+AGG - chr3_4:31906693-31906712 Msa0497680:intron 50.0%
CTATTAGGACCCAATGGAGC+GGG - chr3_4:31907242-31907261 Msa0497680:CDS 50.0%
AATTCGGTCCGAAGCTCTAC+TGG - chr3_4:31907466-31907485 Msa0497680:CDS 50.0%
GAGAGATGGAAAGACACCTG+GGG + chr3_4:31907526-31907545 None:intergenic 50.0%
AGCATCTAGCTACCAGGTCA+GGG + chr3_4:31907644-31907663 None:intergenic 50.0%
! ATCCTATGGGAGGCTTTGTC+TGG - chr3_4:31907823-31907842 Msa0497680:intron 50.0%
ATTGGCAGAGGTGAGACTCA+CGG - chr3_4:31908007-31908026 Msa0497680:intron 50.0%
GATGCAGCCAAAGTAAGAGC+TGG - chr3_4:31908029-31908048 Msa0497680:CDS 50.0%
AGAGCTGGAAGTTACAGTGG+AGG - chr3_4:31908044-31908063 Msa0497680:CDS 50.0%
GATGCTGTGTCACCATTTGC+AGG + chr3_4:31908470-31908489 None:intergenic 50.0%
AGCATCAGCAAGACATCGTG+AGG - chr3_4:31908484-31908503 Msa0497680:intron 50.0%
!! AGGAGTGCCTCTCTTTCATG+AGG + chr3_4:31908665-31908684 None:intergenic 50.0%
GGCATATCTGACATCCAGCT+TGG - chr3_4:31909211-31909230 Msa0497680:intron 50.0%
!! CTAGAAAGTGCTGCAGCTGA+AGG - chr3_4:31909283-31909302 Msa0497680:intron 50.0%
GACAGACTCTCCAGATGTCA+AGG + chr3_4:31909326-31909345 None:intergenic 50.0%
CCCACATACATAGCTCCTAC+AGG + chr3_4:31909853-31909872 None:intergenic 50.0%
GAGTCTACTGAATACCCCAC+AGG - chr3_4:31909886-31909905 Msa0497680:CDS 50.0%
ACCGGTACCCTTTGTATTGC+CGG - chr3_4:31909943-31909962 Msa0497680:CDS 50.0%
CGTTGTCTTGCAGTAGCAGA+TGG + chr3_4:31910009-31910028 None:intergenic 50.0%
AAGAATTTGGAGGGGAAGGG+AGG - chr3_4:31910243-31910262 Msa0497680:CDS 50.0%
GGAGAGAGAGAGAAGAGGTG+AGG + chr3_4:31902535-31902554 None:intergenic 55.0%
GAGAGGGAGAGAGAGAGAAG+AGG + chr3_4:31902540-31902559 None:intergenic 55.0%
!! GTTGCCTCTTCAGCTTGCTG+CGG - chr3_4:31903150-31903169 Msa0497680:intron 55.0%
TGACGCTGCGGCTTAGATTG+TGG - chr3_4:31904162-31904181 Msa0497680:intron 55.0%
TTCAAGGAATTCCCGCACCC+AGG - chr3_4:31904725-31904744 Msa0497680:intron 55.0%
AAAGGAGCCATTCCTGGGTG+CGG + chr3_4:31904740-31904759 None:intergenic 55.0%
GGGATAGGCAATGACCGTGA+TGG - chr3_4:31905321-31905340 Msa0497680:intron 55.0%
AGGCCTGAGTGTGCTTGCAA+AGG - chr3_4:31905915-31905934 Msa0497680:intron 55.0%
CAGCCTTTGCAAGCACACTC+AGG + chr3_4:31905921-31905940 None:intergenic 55.0%
!! GGGGTTAGCTGGAATACACG+AGG - chr3_4:31905961-31905980 Msa0497680:intron 55.0%
CCGTCTCCTGTCCAATAACG+AGG + chr3_4:31906350-31906369 None:intergenic 55.0%
CGTTATTGGACAGGAGACGG+AGG - chr3_4:31906350-31906369 Msa0497680:CDS 55.0%
TCAGTGATTCCTCCCTGACC+TGG - chr3_4:31907629-31907648 Msa0497680:intron 55.0%
ATCTAGCTACCAGGTCAGGG+AGG + chr3_4:31907641-31907660 None:intergenic 55.0%
GAGCATCTAGCTACCAGGTC+AGG + chr3_4:31907645-31907664 None:intergenic 55.0%
GACCAGACAAAGCCTCCCAT+AGG + chr3_4:31907828-31907847 None:intergenic 55.0%
TAGCGGAACAAGTTCAGGCC+TGG + chr3_4:31907919-31907938 None:intergenic 55.0%
AAGGGAAAGCTGCGCTGCAT+TGG - chr3_4:31908365-31908384 Msa0497680:intron 55.0%
GACATCTGGAGAGTCTGTCC+AGG - chr3_4:31909327-31909346 Msa0497680:intron 55.0%
! GCCGGCAATACAAAGGGTAC+CGG + chr3_4:31909947-31909966 None:intergenic 55.0%
GGAGTGGCCGGCAATACAAA+GGG + chr3_4:31909953-31909972 None:intergenic 55.0%
! ATGAGCTTTCTGGGAGTGGC+CGG + chr3_4:31909965-31909984 None:intergenic 55.0%
CTGCTACTGCAAGACAACGC+CGG - chr3_4:31910010-31910029 Msa0497680:CDS 55.0%
CTCCATGAACTGACCCTGAC+CGG + chr3_4:31910032-31910051 None:intergenic 55.0%
CTGCGGAGCGTGAAATCGCT+AGG - chr3_4:31903167-31903186 Msa0497680:intron 60.0%
GGAATTCCCGCACCCAGGAA+TGG - chr3_4:31904730-31904749 Msa0497680:intron 60.0%
AAGGAGCCATTCCTGGGTGC+GGG + chr3_4:31904739-31904758 None:intergenic 60.0%
GGGAGTGGCCGGCAATACAA+AGG + chr3_4:31909954-31909973 None:intergenic 60.0%
ACTGCAAGACAACGCCGGTC+AGG - chr3_4:31910015-31910034 Msa0497680:CDS 60.0%
CTGCAAGACAACGCCGGTCA+GGG - chr3_4:31910016-31910035 Msa0497680:CDS 60.0%
CGCTCCGCAGCAAGCTGAAG+AGG + chr3_4:31903157-31903176 None:intergenic 65.0%
CGCCGGTCAGGGTCAGTTCA+TGG - chr3_4:31910027-31910046 Msa0497680:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 31902517 31910379 31902517 ID=Msa0497680;Name=Msa0497680
chr3_4 mRNA 31902517 31910379 31902517 ID=Msa0497680-mRNA-1;Parent=Msa0497680;Name=Msa0497680-mRNA-1;_AED=0.08;_eAED=0.08;_QI=91|0.92|0.93|1|1|1|15|284|947
chr3_4 exon 31902517 31903049 31902517 ID=Msa0497680-mRNA-1:exon:6963;Parent=Msa0497680-mRNA-1
chr3_4 exon 31903548 31903724 31903548 ID=Msa0497680-mRNA-1:exon:6962;Parent=Msa0497680-mRNA-1
chr3_4 exon 31904208 31904288 31904208 ID=Msa0497680-mRNA-1:exon:6961;Parent=Msa0497680-mRNA-1
chr3_4 exon 31904367 31904669 31904367 ID=Msa0497680-mRNA-1:exon:6960;Parent=Msa0497680-mRNA-1
chr3_4 exon 31904760 31904903 31904760 ID=Msa0497680-mRNA-1:exon:6959;Parent=Msa0497680-mRNA-1
chr3_4 exon 31904990 31905079 31904990 ID=Msa0497680-mRNA-1:exon:6958;Parent=Msa0497680-mRNA-1
chr3_4 exon 31905368 31905444 31905368 ID=Msa0497680-mRNA-1:exon:6957;Parent=Msa0497680-mRNA-1
chr3_4 exon 31905576 31905693 31905576 ID=Msa0497680-mRNA-1:exon:6956;Parent=Msa0497680-mRNA-1
chr3_4 exon 31906182 31906411 31906182 ID=Msa0497680-mRNA-1:exon:6955;Parent=Msa0497680-mRNA-1
chr3_4 exon 31906510 31906669 31906510 ID=Msa0497680-mRNA-1:exon:6954;Parent=Msa0497680-mRNA-1
chr3_4 exon 31906873 31907067 31906873 ID=Msa0497680-mRNA-1:exon:6953;Parent=Msa0497680-mRNA-1
chr3_4 exon 31907199 31907267 31907199 ID=Msa0497680-mRNA-1:exon:6952;Parent=Msa0497680-mRNA-1
chr3_4 exon 31907383 31907568 31907383 ID=Msa0497680-mRNA-1:exon:6951;Parent=Msa0497680-mRNA-1
chr3_4 exon 31908028 31908197 31908028 ID=Msa0497680-mRNA-1:exon:6950;Parent=Msa0497680-mRNA-1
chr3_4 exon 31909694 31910379 31909694 ID=Msa0497680-mRNA-1:exon:6949;Parent=Msa0497680-mRNA-1
chr3_4 five_prime_UTR 31910289 31910379 31910289 ID=Msa0497680-mRNA-1:five_prime_utr;Parent=Msa0497680-mRNA-1
chr3_4 CDS 31909694 31910288 31909694 ID=Msa0497680-mRNA-1:cds;Parent=Msa0497680-mRNA-1
chr3_4 CDS 31908028 31908197 31908028 ID=Msa0497680-mRNA-1:cds;Parent=Msa0497680-mRNA-1
chr3_4 CDS 31907383 31907568 31907383 ID=Msa0497680-mRNA-1:cds;Parent=Msa0497680-mRNA-1
chr3_4 CDS 31907199 31907267 31907199 ID=Msa0497680-mRNA-1:cds;Parent=Msa0497680-mRNA-1
chr3_4 CDS 31906873 31907067 31906873 ID=Msa0497680-mRNA-1:cds;Parent=Msa0497680-mRNA-1
chr3_4 CDS 31906510 31906669 31906510 ID=Msa0497680-mRNA-1:cds;Parent=Msa0497680-mRNA-1
chr3_4 CDS 31906182 31906411 31906182 ID=Msa0497680-mRNA-1:cds;Parent=Msa0497680-mRNA-1
chr3_4 CDS 31905576 31905693 31905576 ID=Msa0497680-mRNA-1:cds;Parent=Msa0497680-mRNA-1
chr3_4 CDS 31905368 31905444 31905368 ID=Msa0497680-mRNA-1:cds;Parent=Msa0497680-mRNA-1
chr3_4 CDS 31904990 31905079 31904990 ID=Msa0497680-mRNA-1:cds;Parent=Msa0497680-mRNA-1
chr3_4 CDS 31904760 31904903 31904760 ID=Msa0497680-mRNA-1:cds;Parent=Msa0497680-mRNA-1
chr3_4 CDS 31904367 31904669 31904367 ID=Msa0497680-mRNA-1:cds;Parent=Msa0497680-mRNA-1
chr3_4 CDS 31904208 31904288 31904208 ID=Msa0497680-mRNA-1:cds;Parent=Msa0497680-mRNA-1
chr3_4 CDS 31903548 31903724 31903548 ID=Msa0497680-mRNA-1:cds;Parent=Msa0497680-mRNA-1
chr3_4 CDS 31902801 31903049 31902801 ID=Msa0497680-mRNA-1:cds;Parent=Msa0497680-mRNA-1
chr3_4 three_prime_UTR 31902517 31902800 31902517 ID=Msa0497680-mRNA-1:three_prime_utr;Parent=Msa0497680-mRNA-1
Gene Sequence

>Msa0497680

ATGACAAACGCTTTTACGTTGGTAACACAACAATACAAAGCGTTGCTTAAAAAAAACATATTACTCTCATGGCGCAGCAAAAGATCAATCCTTCTTCAACTCCTCTCACCAATCTTCTTCATTTTCCTAATCTTCGCCATAGACAAAGCAATAAAAGCTCAATCATCAACAACTTCTGCATTCAAAGAAATCAGAAACCCACCATTGATTCCATCTCCATCAATCAAACCTTGTGAGGAGAAATTCTTCATGAAAATGCCGTGTTATGATTTCGTTTGGAGCGGTGATGATGATCCAAAGTTTCGTACGATTGTTGATAGGATAATTAAGAATAATCCTGGTAGAGAAATACCTGTTGAAAAGGTGAAGAGTTTTCGTGATAAGAATGAAGTTGATGATTGGTTGTTTAAGAATCCTATGCAATGTCCTGGTGCTATTCATTTTAGTGAAAAGAATGGAAGTATTATTAGTTATGGGATTCAGACCAATTCTACTAGTGTTCAGAAACGTGGCAAGTATGAAGATCCTACTTTTGATTTTCAGTTGCCTCTTCAGCTTGCTGCGGAGCGTGAAATCGCTAGGTTTCTTATTGGAGACCCAGACTTCAAGTGGAATGTGTTTTTCAAGGAATTCCCGCACCCAGGAATGGCTCCTTTCTCTACAGTTGGATCAATGGGTCCAACATTTTTTCTTGCAACTGCTATGTTTAATTTCGTTCTTCAGATAAGTTCATTGGTGACAGAGAAAGAGCTTAAACTTCGCCAGGCAATGACCGTGATGGGGCTTTACGACTCTGCATACTGGTTATCATGGCTAACCTGGGAAACAGTTGTTACACTCATATCATCTCTTCTCTTAGTTCTTACTGGCATGATGTTTCAGTTTGATTTCTTCTTGAAAAACAATTTCGCTGTTCTGTTCTTTTTGTTCTTCCTATTTGAACTCAACATGACTGGGTTTGCCTTCTTGTTATCAGCTTTCATTCGTAAATCATCTTCGGCAACAACAGTCGGCTTCTCCATGGTATCAACAGTAGGAGGTGTAAAAATTTTCCCTGGTCATTACCGAGATTTATGGTTATTGTTTCCGCCTAATCCTTTTGCTCAAGGCCTGAGTGTGCTTGCAAAGGCTGTTTCAACTCCTGAAGATAACGGGGTTAGCTGGAATACACGAGGAAAATGTGCCGTTAACGACGATGACTGTGTGCTGACAATGAATGATATTTATATACGGCTTCTGGCCACGTTCTTTCTGTGGTTCGTTCTTGCCATCTACTTTGACAATATAATCCCAAATGAAATGGGTGTGAGGAAATCTGTGTTGTACTTTCTAAATCCTCGTTATTGGACAGGAGACGGAGGACAAAAAGTGAAAGAGGGTGGGATTTGTAGTTGCATATCTTCAACCCGGCATGAAGAGTTTAGTCCACCAGATGATGAAGACGTCCTTGAAGAAGAAAATGTTGTGAAGCAGCAACAAACACAAGGTATTGTTGATGCAAATGTTGCTGTTCAGGTACAAGGCATTGTGAAGACTTACCCCGGTATATTTAAATTTGGTTGCTGCTGTAACTGTAAAAGAACTGCTCCTTACCACGCTGTTAAGGGCTTGTGGGTGAACTTTACAAAGAATCAGTTATTTTGTCTATTAGGACCCAATGGAGCGGGAAAAACTACAGCTATTAGTTGTTTGACAGGGATAACTCCAGTAACTGATGGAGATGCATTGATTTATGGGAATTCGGTCCGAAGCTCTACTGGCATGTCAAACATTCGAAAGATTATTGGAGTGTGTCCCCAGTTTGATATCCTATGGGAGGCTTTGTCTGGTCAAGAACACCTCGAACTCTTCTCTAGAATTAAAGGGCTGTCCCCAGATTCTATAAAATCAATTACAGAAACATCATTGGCAGAGGTGAGACTCACGGATGCAGCCAAAGTAAGAGCTGGAAGTTACAGTGGAGGAATGAAACGTCGTCTCAGTGTTGCAATTGCACTTATCGGTGACCCCAAATTAGTCATTTTGGATGAACCGACTACTGGTATGGATCCAATAACAAGGAGGCATGTGTGGGACATAATTGAAAATGCAAAAAAAGGGCGTGCCATTGTTCTCACAACACATTCTATGGAAGAAGCTGACATTCTAAGCGACCGTATAGGAATCATGGCAAAGGGAAAGCTGCGCTGCATTGGAACCTCGATCAGATTGAAGTCACGTTTTGGTACTGGCTTTATTACAAATATTAGCTTCGCAAACAACAATGATCACAGTCCTGCAAATGGTGACACAGCATCAGCAAGACATCGTGAGGCTGTGAAGCAATTCTTTAAGAATCATTTAGATGTAGTACCAAAAGAGGAGAACAATAACTTCCTAACTTATGTGATTCCTCATGAAAGAGAGGCACTCCTTACAAATTTCTTTTCAGAGCTCCAAGATAGAAAAGAAGAATTTGGCATATCTGACATCCAGCTTGGTCTAACAACTCTTGAAGAAGTTTTCTTGAATATTGCAAAGCAGGCAGAGCTAGAAAGTGCTGCAGCTGAAGGGACCCTAGTGACTTTGACCTTGACATCTGGAGAGTCTGTCCAGATTCCTGTAGGAGCTATGTATGTGGGATTTCCAGGATCAGAGTCTACTGAATACCCCACAGGTTTTATGGTAGAAGTATACTGGGAACAAGATGACACCGGTACCCTTTGTATTGCCGGCCACTCCCAGAAAGCTCATATTCCTCAAAATATCCAACTACCATCTGCTACTGCAAGACAACGCCGGTCAGGGTCAGTTCATGGAGTTGTGATTGATCCAAATCAAGTTAGTTCAGACAGTTTTCGGTGA

Protein sequence

>Msa0497680

MTNAFTLVTQQYKALLKKNILLSWRSKRSILLQLLSPIFFIFLIFAIDKAIKAQSSTTSAFKEIRNPPLIPSPSIKPCEEKFFMKMPCYDFVWSGDDDPKFRTIVDRIIKNNPGREIPVEKVKSFRDKNEVDDWLFKNPMQCPGAIHFSEKNGSIISYGIQTNSTSVQKRGKYEDPTFDFQLPLQLAAEREIARFLIGDPDFKWNVFFKEFPHPGMAPFSTVGSMGPTFFLATAMFNFVLQISSLVTEKELKLRQAMTVMGLYDSAYWLSWLTWETVVTLISSLLLVLTGMMFQFDFFLKNNFAVLFFLFFLFELNMTGFAFLLSAFIRKSSSATTVGFSMVSTVGGVKIFPGHYRDLWLLFPPNPFAQGLSVLAKAVSTPEDNGVSWNTRGKCAVNDDDCVLTMNDIYIRLLATFFLWFVLAIYFDNIIPNEMGVRKSVLYFLNPRYWTGDGGQKVKEGGICSCISSTRHEEFSPPDDEDVLEEENVVKQQQTQGIVDANVAVQVQGIVKTYPGIFKFGCCCNCKRTAPYHAVKGLWVNFTKNQLFCLLGPNGAGKTTAISCLTGITPVTDGDALIYGNSVRSSTGMSNIRKIIGVCPQFDILWEALSGQEHLELFSRIKGLSPDSIKSITETSLAEVRLTDAAKVRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIENAKKGRAIVLTTHSMEEADILSDRIGIMAKGKLRCIGTSIRLKSRFGTGFITNISFANNNDHSPANGDTASARHREAVKQFFKNHLDVVPKEENNNFLTYVIPHEREALLTNFFSELQDRKEEFGISDIQLGLTTLEEVFLNIAKQAELESAAAEGTLVTLTLTSGESVQIPVGAMYVGFPGSESTEYPTGFMVEVYWEQDDTGTLCIAGHSQKAHIPQNIQLPSATARQRRSGSVHGVVIDPNQVSSDSFR*